Methods for inhibition of membrane fusion-associated events, including HIV transmission

ABSTRACT

The present invention relates to peptides which exhibit potent anti-retroviral activity. The peptides of the invention comprise DP178 (SEQ ID:1) peptide corresponding to amino acids 638 to 673 of the HIV-1LAI gp41 protein, and fragments, analogs and homologs of DP178. The invention further relates to the uses of such peptides as inhibitory of human and non-human retroviral, especially HIV, transmission to uninfected cells.

This is a division of Ser. No. 08/470,896, filed Jun. 6, 1995, now U.S. Pat. No. 6,479,055 which is a continuation-in-part of Ser. No. 08/360,107, filed Dec. 20, 1994 now U.S. Pat. No. 6,017,536, which is a continuation-in-part of Ser. No. 08/255,208, filed Jun. 7, 1994 now U.S. Pat. No. 6,440,656, which is a continuation-in-part of Ser. No. 08/073,028 filed Jun. 7, 1993 now U.S. Pat. No. 5,469,933, each of which is incorporated by reference herein in its entirety.

This invention was made with Government support under Grant No. AI-30411-02 awarded by the National Institutes of Health. The Government has certain rights in the invention.

1. INTRODUCTION

The present invention relates, first, to DP178 (SEQ ID NO:1), a peptide corresponding to amino acids 638 to 673 of the HIV-1_(LAI) transmembrane protein (TM) gp41, and portions or analogs of DP178 (SEQ ID NO:1), which exhibit anti-membrane fusion capability, antiviral activity, such as the ability to inhibit HIV transmission to uninfected CD-4⁺ cells, or an ability to modulate intracellular processes involving coiled-coil peptide structures. Further, the invention relates to the use of DP178 (SEQ ID NO:1) and DP178 portions and/or analogs as antifusogenic or antiviral compounds or as inhibitors of intracellular events involving coiled-coil peptide structures. The present invention also relates to peptides analogous to DP107, a peptide corresponding to amino acids 558 to 595 of the HIV-1_(LAI) transmembrane protein (TM) gp41, having amino acid sequences present in other viruses, such as enveloped viruses, and/or other organisms, and further relates to the uses of such peptides. These peptides exhibit anti-membrane fusion capability, antiviral activity, or the ability to modulate intracellular processes involving coiled-coil peptide structures. The present invention additionally relates to methods for identifying compounds that disrupt the interaction between DP178 and DP107, and/or between DP107-like and DP178-like peptides. Further, the invention relates to the use of the peptides of the invention as diagnostic agents. For example, a DP178 peptide may be used as an HIV subtype-specific diagnostic. The invention is demonstrated, first, by way of an Example wherein DP178 (SEQ ID:1), and a peptide whose sequence is homologous to DP178 are each shown to be potent, non-cytotoxic inhibitors of HIV-1 transfer to uninfected CD-4⁺ cells. The invention is further demonstrated by Examples wherein peptides having structural and/or amino acid motif similarity to DP107 and DP178 are identified in a variety of viral and nonviral organisms, and in examples wherein a number of such identified peptides derived from several different viral systems are demonstrated to exhibit antiviral activity.

2. BACKGROUND OF THE INVENTION 2.1 MEMBRANE FUSION EVENTS

Membrane fusion is a ubiquitous cell biological process (for a review, see White, J. M., 1992, Science 258:917-924). Fusion events which mediate cellular housekeeping functions, such as endocytosis, constitutive secretion, and recycling of membrane components, occur continuously in all eukaryotic cells.

Additional fusion events occur in specialized cells. Intracellularly, for example, fusion events are involved in such processes as occur in regulated exocytosis of hormones, enzymes and neurotransmitters. Intercellularly, such fusion events feature prominently in, for example, sperm-egg fusion and myoblast fusion.

Fusion events are also associated with disease states. For example, fusion events are involved in the formation of giant cells during inflammatory reactions, the entry of all enveloped viruses into cells, and, in the case of human immunodeficiency virus (HIV), for example, are responsible for the virally induced cell-cell fusion which leads to cell death.

2.2. THE HUMAN IMMUNODEFICIENCY VIRUS

The human immunodeficiency virus (HIV) has been implicated as the primary cause of the slowly degenerative immune system disease termed acquired immune deficiency syndrome (AIDS) (Barre-Sinoussi, F. et al., 1983, Science 220:868-870; Gallo, R. et al., 1984, Science 224:500-503). There are at least two distinct types of HIV: HIV-1 (Barre-Sinoussi, F. et al., 1983, Science 220:868-870; Gallo R. et al., 1984, Science 224:500-503) and HIV-2 (Clavel, F. et al., 1986, Science 233:343-346; Guyader, M. et al., 1987, Nature 326:662-669). Further, a large amount of genetic heterogeneity exists within populations of each of these types. Infection of human CD-4⁺ T-lymphocytes with an HIV virus leads to depletion of the cell type and eventually to opportunistic infections, neurological dysfunctions, neoplastic growth, and ultimately death.

HIV is a member of the lentivirus family of retroviruses (Teich, N. et al., 1984, RNA Tumor Viruses, Weiss, R. et al., eds., CSH-Press, pp. 949-956). Retroviruses are small enveloped viruses that contain a diploid, single-stranded RNA genome, and replicate via a DNA intermediate produced by a virally-encoded reverse transcriptase, an RNA-dependent DNA polymerase (Varmus, H., 1988, Science 240:1427-1439). Other retroviruses include, for example, oncogenic viruses such as human T-cell leukemia viruses (HTLV-I,-II,-III), and feline leukemia virus.

The HIV viral particle consists of a viral core, composed of capsid proteins, that contains the viral RNA genome and those enzymes required for early replicative events. Myristylated Gag protein forms an outer viral shell around the viral core, which is, in turn, surrounded by a lipid membrane enveloped derived from the infected cell membrane. The HIV enveloped surface glycoproteins are synthesized as a single 160 Kd precursor protein which is cleaved by a cellular protease during viral budding into two glycoproteins, gp41 and gp120. gp41 is a transmembrane protein and gp120 is an extracellular protein which remains non-covalently associated with gp41, possibly in a trimeric or multimeric form (Hammarskjold, M. and Rekosh, D., 1989, Biochem. Biophys. Acta 989:269-280).

HIV is targeted to CD-4⁺ cells because the CD-4 cell surface protein acts as the cellular receptor for the HIV-1 virus (Dalgleish, A. et al., 1984, Nature 312:763-767; Klatzmann et al., 1984, Nature 312:767-768; Maddon et al., 1986, Cell 47:333-348). Viral entry into cells is dependent upon gpl2O binding the cellular CD-4⁺ receptor molecules (McDougal, J. S. et al., 1986, Science 231:382-385; Maddon, P. J. et al., 1986, Cell 47:333-348) and thus explains HIV's tropism for CD-4⁺ cells, while gp41 anchors the enveloped glycoprotein complex in the viral membrane.

2.3. HIV TREATMENT

HIV infection is pandemic and HIV associated diseases represent a major world health problem. Although considerable effort is being put into the successful design of effective therapeutics, currently no curative anti-retroviral drugs against AIDS exist. In attempts to develop such drugs, several stages of the HIV life cycle have been considered as targets for therapeutic intervention (Mitsuya, H. et al., 1991, FASEB J. 5:2369-2381). For example, virally encoded reverse transcriptase has been one focus of drug development. A number of reverse-transcriptase-targeted drugs, including 2′,3′-dideoxynucleoside analogs such as AZT, ddI, ddC, and d4T have been developed which have been shown to been active against HIV (Mitsuya, H. et al., 1991, Science 249:1533-1544). While beneficial, these nucleoside analogs are not curative, probably due to the rapid appearance of drug resistant HIV mutants (Lander, B. et al., 1989, Science 243:1731-1734). In addition, the drugs often exhibit toxic side effects such as bone marrow suppression, vomiting, and liver function abnormalities.

Attempts are also being made to develop drugs which can inhibit viral entry into the cell, the earliest stage of HIV infection. Here, the focus has thus far been on CD4, the cell surface receptor for HIV. Recombinant soluble CD4, for example, has been shown to inhibit infection of CD-4⁺ T-cells by some HIV-1 strains (Smith, D. H. et al., 1987, Science 238:1704-1707). Certain primary HIV-1 isolates, however, are relatively less sensitive to inhibition by recombinant CD-4 (Daar, E. et al., 1990, Proc. Natl. Acad. Sci. USA 87:6574-6579). In addition, recombinant soluble CD-4 clinical trials have produced inconclusive results (Schooley, R. et al., 1990, Ann. Int. Med. 112:247-253; Kahn, J. O. et al., 1990, Ann. Int. Med. 112:254-261; Yarchoan, R. et al., 1989, Proc. Vth Int. Conf. on AIDS, p. 564, MCP 137).

The late stages of HIV replication, which involve crucial virus-specific secondary processing of certain iral proteins, have also been suggested as possible anti-HIV drug targets. Late stage processing is dependent on the activity of a viral protease, and drugs are being developed which inhibit this protease (Erickson, J., 1990, Science 249:527-533). The clinical outcome of these candidate drugs is still in question.

Attention is also being given to the development of vaccines for the treatment of HIV infection. The HIV-1 enveloped proteins (gp160, gp120, gp41) have been shown to be the major antigens for anti-HIV antibodies present in AIDS patients (Barin, et al., 1985, Science 228:1094-1096). Thus far, therefore, these proteins seem to be the most promising candidates to act as antigens for anti-HIV vaccine development. To this end, several groups have begun to use various portions of gp160, gp120, and/or gp41 as immunogenic targets for the host immune system. See for example, Ivanoff, L. et al., U.S. Pat. No. 5,141,867; Saith, G. et al., WO 92/22,654; Shafferman, A., WO 91/09,872; Formoso, C. et al., WO 90/07,119. Clinical results concerning these candidate vaccines, however, still remain far in the future.

Thus, although a great deal of effort is being directed to the design and testing of anti-retroviral drugs, a truly effective, non-toxic treatment is still needed.

3. SUMMARY OF THE INVENTION

The present invention relates, first, to DP178 (SEQ ID:1), a 36-amino acid synthetic peptide corresponding to amino acids 638 to 673 of the transmembrane protein (TM) gp41 from the HIV-1 isolate LAI (HIV-1_(LAI)), which exhibits potent anti-HIV-1 activity. As evidenced by the Example presented below, in Section 6, the DP178 (SEQ ID:1) antiviral activity is so high that, on a weight basis, no other known anti-HIV agent is effective at concentrations as low as those at which DP178 (SEQ ID:1) exhibits its inhibitory effects.

The invention further relates to those portions and analogs of DP178 which also show such antiviral activity, and/or show anti-membrane fusion capability, or an ability to modulate intracellular processes involving coiled-coil peptide structures. The term “DP178 analog” refers to a peptide which contains an amino acid sequence corresponding to the DP178 peptide sequence present within the gp41 protein of HIV-1_(LAI), but found in viruses and/or organisms other than HIV-1_(LAI). Such DP178 analog peptides may, therefore, correspond to DP178-like amino acid sequences present in other viruses, such as, for example, enveloped viruses, such as retroviruses other than HIV-1_(LAI), as well as non-enveloped viruses. Further, such analogous DP178 peptides may also correspond to DP178-like amino acid sequences present in nonviral organisms.

The invention further relates to DP107 (SEQ ID NO:89) peptide analogs. DP107 is a peptide corresponding to amino acids 558-595 of the HIV-1_(LAI) transmembrane protein (TM) gp41. The term “DP107 analog” as used herein refers to a peptide which contains an amino acid sequence corresponding to the DP107 peptide sequence present within the gp41 protein of HIV-1_(LAI), but found in viruses and organisms other than HIV-1_(LAI). Such DP107 analog peptides may, therefore, correspond to DP107-like amino acid sequences present in other viruses, such as, for example, enveloped viruses, such as retroviruses other than HIV-1_(LAI), as well as non-enveloped viruses. Further, such DP107 analog peptides may also correspond to DP107-like amino acid sequences present in nonviral organisms.

Further, the peptides of the invention include DP107 analog and DP178 analog peptides having amino acid sequences recognized or identified by the 107×178×4, ALLMOTI5 and/or PLZIP search motifs described herein.

The peptides of the invention may, for example, exhibit antifusogenic activity, antiviral activity, and/or may have the ability to modulate intracellular processes which involve coiled-coil peptide structures. With respect to the antiviral activity of the peptides of the invention, such an antiviral activity includes, but is not limited to the inhibition of HIV transmission to uninfected CD-4⁺ cells. Additionally, the antifusogenic capability, antiviral activity or intracellular modulatory activity of the peptides of the invention merely requires the presence of the peptides of the invention, and, specifically, does not require the stimulation of a host immune response directed against such peptides.

The peptides of the invention may be used, for example, as inhibitors of membrane fusion-asociated events, such as, for example, the inhibition of human and non-human retroviral, especially HIV, transmission to uninfected cells. It is further contemplated that the peptides of the invention may be used as modulators of intracellular events involving coiled-coil peptide structures.

The peptides of the invention may, alternatively, be used to identify compounds which may themselves exhibit antifusogenic, antiviral, or intracellular modulatory activity. Additional uses include, for example, the use of the peptides of the invention as organism or viral type and/or subtype-specific diagnostic tools.

The terms “antifusogenic” and “anti-membrane fusion”, as used herein, refer to an agent's ability to inhibit or reduce the level of membrane fusion events between two or more moieties relative to the level of membrane fusion which occurs between said moieties in the absence of the peptide. The moieties may be, for example, cell membranes or viral structures, such as viral envelopes or pili. The term “antiviral”, as used herein, refers to the compound's ability to inhibit viral infection of cells, via, for example, cell-cell fusion or free virus infection. Such infection may involve membrane fusion, as occurs in the case of enveloped viruses, or some other fusion event involving a viral structure and a cellular structure (e.g., such as the fusion of a viral pilus and bacterial membrane during bacterial conjugation).

It is also contemplated that the peptides of the invention may exhibit the ability to modulate intracellular events involving coiled-coil peptide structures. “Modulate”, as used herein, refers to a stimulatory or inhibitory effect on the intracellular process of interest relative to the level or activity of such a process in the absence of a peptide of the invention.

Embodiments of the invention are demonstrated below wherein an extremely low concentration of DP178 (SEQ ID:1), and very low concentrations of a DP178 homolog (SEQ ID:3) are shown to be potent inhibitors of HIV-1 mediated CD-4⁺ cell-cell fusion (i.e., syncytial formation) and infection of CD-4⁺ cells by cell-free virus. Further, it is shown that DP178 (SEQ ID:1) is not toxic to cells, even at concentrations 3 logs higher than the inhibitory DP-178 (SEQ ID:1) concentration.

The present invention is based, in part, on the surprising discovery that the DP107 and DP178 domains of the HIV gp41 protein non-covalently complex with each other, and that their interaction is required for the normal infectivity of the virus. This discovery is described in the Example presented, below, in Section 8. The invention, therefore, further relates to methods for identifying antifusogenic, including antiviral, compounds that disrupt the interaction between DP107 and DP178, and/or between DP107-like and DP178-like peptides.

Additional embodiments of the invention (specifically, the Examples presents in Sections 9-16 and 19-25, below) are demonstrated, below, wherein peptides, from a variety of viral and nonviral sources, having structural and/or amino acid motif similarity to DP107 and DP178 are identified, and search motifs for their identification are described. Further, Examples (in Sections 17, 18, 25-29) are presented wherein a number of the peptides of the invention are demonstrated exhibit substantial antiviral activity or activity predictive of antiviral activity.

3.1. DEFINITIONS

Peptides are defined herein as organic compounds comprising two or more amino acids covalently joined by peptide bonds. Peptides may be referred to with respect to the number of constituent amino acids, i.e., a dipeptide contains two amino acid residues, a tripeptide contains three, etc. Peptides containing ten or fewer amino acids may be referred to as oligopeptides, while those with more than ten amino acid residues are polypeptides. Such peptides may also include any of the modifications and additional amino and carboxy groups as are described herein.

Peptide sequences defined herein are represented by one-letter symbols for amino acid residues as follows:

A (alanine) R (arginine) N (asparagine) D (aspartic acid) C (cysteine) Q (glutamine) E (glutamic acid) G (glycine) H (histidine) I (isoleucine) L (leucine) K (lysine) M (methionine) F (phenylalanine) P (proline) S (serine) T (threonine) W (tryptophan) Y (tyrosine) V (valine)

4. BRIEF DESCRIPTION OF THE FIGURES

FIG. 1. Amino acid sequence of DP178 (SEQ ID:1) derived from HIV_(LAI); DP178 homologs derived from HIV-1_(SF2) (DP-185; SEQ ID:3), HIV-1_(RF) (SEQ ID:4), and HIV-1_(MN) (SEQ ID:5); DP178 homologs derived from amino acid sequences of two prototypic HIV-2 isolates, namely, HIV-2_(rod) (SEQ ID:6) and HIV-2_(NIHZ) (SEQ ID:7); control peptides: DP-180 (SEQ ID:2), a peptide incorporating the amino acid residues of DP178 in a scrambled sequence; DP-118 (SEQ ID:10) unrelated to DP178, which inhibits HIV-1 cell free virus infection; DP-125 (SEQ ID:8), unrelated to DP178, also inhibits HIV-1 cell free virus infection; DP-116 (SEQ ID:9), unrelated to DP178, is negative for inhibition of HIV-1 infection when tested using a cell-free virus infection assay. Throughout the figures, the one letter amino acid code is used.

FIG. 2. Inhibition of HIV-1 cell-free virus infection by synthetic peptides. IC₅₀ refers to the concentration of peptide that inhibits RT production from infected cells by 50% compared to the untreated control. Control: the level of RT produced by untreated cell cultures infected with the same level of virus as treated cultures.

FIG. 3. Inhibition of HIV-1 and HIV-2 cell-free virus infection by the synthetic peptide DP178 (SEQ ID:1). IC₅₀: concentration of peptide that inhibits RT production by 50% compared to the untreated control. Control: Level of RT produced by untreated cell cultures infected with the same level of virus as treated cultures.

FIGS. 4A-4B. Fusion Inhibition Assays. FIG. 4A: DP178 (SEQ ID:1) inhibition of HIV-1 prototypic isolate-mediated syncytial formation; data represents the number of virus-induced syncytial per cell. FIG. 4B: DP-180 (SEQ ID:2) represents a scrambled control peptide; DP-185 (SEQ ID:3) represents a DP178 homolog derived from HIV-1_(SF2) isolate; Control, refers to the number of syncytial produced in the absence of peptide.

FIG. 5. Fusion inhibition assay: HIV-1 vs. HIV-2. Data represents the number of virus-induced syncytial per well. ND: not done.

FIG. 6. Cytotoxicity study of DP178 (SEQ ID:1) and DP-116 (SEQ ID:9) on CEM cells. Cell proliferation data is shown.

FIG. 7. Schematic representation of HIV-gp41 and maltose binding protein (MBP)-gp41 fusion proteins. DP107 and DP178 are synthetic peptides based on the two putative helices of gp41. The letter P in the DP107 boxes denotes an Ile to Pro mutation at amino acid number 578. Amino acid residues are numbered according to Meyers et al., “Human Retroviruses and AIDS”, 1991, Theoret. Biol. and Biophys. Group, Los Alamos Natl. Lab., Los Alamos, N.Mex. The proteins are more fully described, below, in Section 8.1.1.

FIG. 8. A point mutation alters the conformation and anti-HIV activity of M41.

FIG. 9. Abrogation of DP178 anti-HIV activity. Cell fusion assays were carried out in the presence of 10 nM DP178 and various concentrations of M41Δ178 or M41PΔ178.

FIG. 10. Binding of DP178 to leucine zipper of gp41 analyzed by FAb-D ELISA.

FIGS. 11A-B. Models for a structural transition in the HIV-1 TM protein. Two models are proposed which indicate a structural transition from a native oligomer to a fusogenic state following a trigger event (possibly gp120 binding to CD4). Common features of both models include (1) the native state is held together by noncovalent protein-protein interactions to form the heterodimer of gp120/41 and other interactions, principally though gp41 interactive sites, to form homo-oligomers on the virus surface of the gp120/41 complexes; (2) shielding of the hydrophobic fusogenic peptide at the N-terminus (F) in the native state; and (3) the leucine zipper domain (DP107) exists as a homo-oligomer coiled coil only in the fusogenic state. The major differences in the two models include the structural state (native or fusogenic) in which the DP107 and DP178 domains are complexed to each other. In the first model (FIG. 11A) this interaction occurs in the native state and in the second (FIG. 11B), it occurs during the fusogenic state. When triggered, the fusion complex in the model depicted in (A) is generated through formation of coiled-coil interactions in homologous DP107 domains resulting in an extended α-helix. This conformational change positions the fusion peptide for interaction with the cell membrane. In the second model (FIG. 11B), the fusogenic complex is stabilized by the association of the DP178 domain with the DP107 coiled-coil.

FIG. 12. Motif design using heptad repeat positioning of amino acids of known coiled-coils [GCN4:(SEQ ID NO:84); C-FOS:(SEQ ID NO:85); C-JUN: (SEQ ID NO:86); C-MYC:(SEQ ID NO:87); FLU LOOP 36:(SEQ ID NO:88)].

FIG. 13. Motif design using proposed heptad repeat positioning of amino acids of DP107 and DP178.

FIG. 14. Hybrid motif design crossing GCN4 and DP107.

FIG. 15. Hybrid motif design crossing GCN4 and DP178.

FIG. 16. Hybrid motif design 107×178×4, crossing DP107 (SEQ ID NO:89) and DP178 (SEQ ID NO:1). This motif was found to be the most consistent at identifying relevant DP107-like and DP178-like peptide regions.

FIG. 17. Hybrid motif design crossing GCN4, DP107, and DP178.

FIG. 18. Hybrid motif design ALLMOTI5 crossing GCN4, DP107, DP178, c-Fos c-Jun, c-Myc, and Flu Loop 36.

FIG. 19. PLZIP motifs designed to identify N-terminal proline-leucine zipper motifs.

FIG. 20. Search results for HIV-1 (BRU isolate) enveloped protein gp41 (SEQ ID NO:90). Sequence search motif designations: Spades (): 107×178×4; Hearts (♡) ALLMOTI5; Clubs (): PLZIP; Diamonds (♦): transmembrane region (the putative transmembrane domains were identified using a PC/Gene program designed to search for such peptide regions). Asterisk (*): Lupas method. The amino acid sequences identified by each motif are bracketed by the respective characters. Representative sequences chosen based on 107×178×4 searches are underlined and in bold. DP107 and DP178 sequences are marked, and additionally double-underlined and italicized.

FIG. 21. Search results for human respiratory syncytial virus (RSV) strain A2 fusion glycoprotein F1 (SEQ ID NO:91). Sequence search motif designations are as in FIG. 20.

FIG. 22. Search results for simian immunodeficiency virus (SIV) enveloped protein gp41 (AGM3 isolate) (SEQ ID NO:92). Sequence search motif designations are as in FIG. 20.

FIG. 23. Search results for canine distemper virus (strain Onderstepoort) fusion glycoprotein 1 (SEQ ID NO:93). Sequence search motif designations are as in FIG. 20.

FIG. 24. Search results for newcastle disease virus (strain Australia-Victoria/32) fusion glycoprotein F1 (SEQ ID NO:94). Sequence search motif designations are as in FIG. 20.

FIG. 25. Search results for human parainfluenza 3 virus (strain NIH 47885) fusion glycoprotein F1 (SEQ ID NO:95). Sequence search motif designations are as in FIG. 20.

FIG. 26. Search results for influenza A virus (strain A/AICHI/2/68) hemagglutinin precursor HA2 (SEQ ID NO:96). Sequence search designations are as in FIG. 20.

FIGS. 27A-F: Respiratory Syncytial Virus (RSV) peptide (SEQ ID NO:97) antiviral and circular dichroism data. FIGS. 27A-C: Peptides derived from the F2 DP178/DP107-like region: [T-22: (SEQ ID NO:121); T-68: (SEQ ID NO:122); T-334: (SEQ ID NO:123); T-371: (SEQ ID NO:124); T-372: (SEQ ID NO:125); T-373: (SEQ ID NO:126); T-374: (SEQ ID NO:127); T-375: (SEQ ID NO:128); T-575: (SEQ ID NO:129)]. Antiviral and CD data. FIGS. 27D-F: Peptides derived from the F1 DP107-like region: [F1-107: (SEQ ID NO:98); T-12: (SEQ ID NO:130); T-13: (SEQ ID NO:131); T-15: (SEQ ID NO:132); T-9: (SEQ ID NO:133); T-28: (SEQ ID NO:134); T-30: (SEQ ID NO:135); T-66: (SEQ ID NO:136); T-576: (SEQ ID NO:137)]. Peptide and CD data.

Antiviral activity (AV) is represented by the following qualitative symbols:

“−”, negative antiviral activity;

“+/−” antiviral activity at greater than 100 μg/ml;

“+”, antiviral activity at between 50-100 μg/ml;

“++”, antiviral activity at between 20-50 μg/ml;

“+++”, antiviral activity at between 1-20 μg/ml;

“++++”, antiviral activity at <1 μg/ml.

CD data, referring to the level of helicity is represented by the following qualitative symbol:

“−”, no helicity;

“+”, 25-50% helicity;

“++”, 50-75% helicity;

“+++”, 75-100% helicity.

IC₅₀ refers to the concentration of peptide necessary to produce only 50% of the number of syncytial relative to infected control cultures containing no peptide. IC₅₀ values were obtained using purified peptides only.

FIGS. 28A-C: Respiratory Syncytial Virus (RSV) DP178-like region (F1) peptide antiviral and CD data [F1-178: (SEQ ID NO:99); T-71: (SEQ ID NO:138); T-384: (SEQ ID NO:139); T-616: (SEQ ID NO:140); T-617: (SEQ ID NO:141); T-662: (SEQ ID NO:142); T-665: (SEQ ID NO:143); T-671: (SEQ ID NO:144); T-730: (SEQ ID NO:145)]. Antiviral symbols, CD symbols, and IC₅₀ are as in FIGS. 27A-F. IC₅₀ values were obtained using purified peptides only.

FIGS. 29A-E. Peptides derived from the HPIV3 F1 DP107-like region. Peptide antiviral and CD data [HPFI 107: (SEQ ID NO:100); T-42: (SEQ ID NO:146); T-39: (SEQ ID NO:147); T-40: (SEQ ID NO:148); T-45: (SEQ ID NO:149); T-46: (SEQ ID NO:150); T-582: (SEQ ID NO:151)]. Antiviral symbols, CD symbols, and IC₅₀ are as in FIGS. 27A-F. Purified peptides were used to obtain IC₅₀ values, except where the values are marked by an asterisk (*); in such cases, the IC₅₀ values were obtained using a crude peptide preparation.

FIGS. 30A-C. Peptides derived from the HPIV3 F1 DP178-like region. Peptide antiviral and CD data [HPF3178: (SEQ ID NO:101); T-269: (SEQ ID NO:152); T-626: (SEQ ID NO:153); T-383: (SEQ ID NO:154); T-577: (SEQ ID NO:155); T-578: (SEQ ID NO:156); T-579: (SEQ ID NO:157)]. Antiviral symbols, CD symbols, and IC₅₀ are as in FIGS. 27A-F. Purified peptides were used to obtain IC₅₀ values, except where the values are marked by an asterisk (*); in such cases, the IC₅₀ values were obtained using a crude peptide preparation.

FIG. 31. Motif search results for simian immunodeficiency virus (SIV) isolate MM251, enveloped polyprotein gp41 (SEQ ID NO:102). Sequence search designations are as in FIG. 20.

FIG. 32. Motif search results for Epstein-Barr Virus (Strain B95-8), glycoprotein gp110 precursor (designated gp115). BALF4 (SEQ ID NO:103): Sequence search designations are as in FIG. 20.

FIG. 33. Motif search results for Epstein-Barr Virus (Strain B95-8), BZLF1 trans-activator protein (designated EB1 or Zebra) (SEQ ID NO:104). Sequence search designations are as in FIG. 20. Additionally, “@” refers to a well known DNA binding domain and “+” refers to a well known dimerization domain, as defined by Flemington and Speck (Flemington, E. and Speck, S. H., 1990, Proc. Natl. Acad. Sci. USA 87:9459-9463).

FIG. 34. Motif search results for measles virus (strain Edmonston), fusion glycoprotein F1 (SEQ ID NO:105). Sequence search designations are as in FIG. 20.

FIG. 35. Motif search results for Hepatitis B Virus (subtype AYW), major surface antigen precursor S. (SEQ ID NO:106) Sequence search designations are as in FIG. 20.

FIG. 36. Motif search results for simian Mason-Pfizer monkey virus, enveloped (TM) protein gp20 (SEQ ID NO:107). Sequence search designations are as in FIG. 20.

FIG. 37. Motif search results for Pseudomonas aerginosa, fimbrial protein (SEQ ID NO:110) (Pilin) (SEQ ID NO:108). Sequence search designations are as in FIG. 20.

FIG. 38. Motif search results for Neisseria gonorrhoeae fimbrial protein (Pilin) (SEQ ID NO:109). Sequence search designations are as in FIG. 20.

FIG. 39. Motif search results for Hemophilus influenzae fimbrial protein. Sequence search designations are as in FIG. 20.

FIG. 40. Motif search results for Staphylococcus aureus, toxic shock syndrome toxin-1 (SEQ ID NO:111). Sequence search designations are as in FIG. 20.

FIG. 41. Motif search results for Staphylococcus aureus enterotoxin Type E (SEQ ID NO:112). Sequence search designations are as in FIG. 20.

FIG. 42. Motif search results for Staphylococcus aureus enterotoxin A (SEQ ID NO:113). Sequence search designations are as in FIG. 20.

FIG. 43. Motif search results for Escherichia coli, heat labile enterotoxin A (SEQ ID NO:114). Sequence search designations are as in FIG. 20.

FIG. 44. Motif search results for human c-fos proto-oncoprotein (SEQ ID NO:115). Sequence search designations are as in FIG. 20.

FIG. 45. Motif search results for human lupus KU autoantigen protein P70 (SEQ ID NO:116). Sequence search designations are as in FIG. 20.

FIG. 46. Motif search results for human zinc finger protein 10 (SEQ ID NO:117). Sequence search designations are as in FIG. 20.

FIGS. 47A-B: Measles virus (MeV) fusion protein DP178-like region antiviral and CD data [T-252AO: (SEQ ID NO:118); T-268AO: (SEQ ID NO:119)]. Antiviral symbols, CD symbols, and IC₅₀ are as in FIGS. 27A-F.

FIGS. 48A-B: Simian immunodeficiency virus (SIV) TM (fusion) protein DP178-like region antiviral data (SEQ ID NO:120). Antiviral symbols are as in FIGS. 27A-F. “NT”, not tested.

FIGS. 49A-L: DP178-derived peptide antiviral data [T50: (SEQ ID NO:159); T234: (SEQ ID NO:161); T235: (SEQ ID NO:162); T570: (SEQ ID NO:163); T381: (SEQ ID NO:164); T677: (SEQ ID NO:165); T589: (SEQ ID NO:166); T590: (SEQ ID NO:167); T591: (SEQ ID NO:168); T270: (SEQ ID NO:169); T271: (SEQ ID NO:170); T273: (SEQ ID NO:171); T608: (SEQ ID NO:172); T609: (SEQ ID NO:173); T610: (SEQ ID NO:174); T611: (SEQ ID NO:175); T612: (SEQ ID NO:176); T595: (SEQ ID NO:177); T95: (SEQ ID NO:178); T96: (SEQ ID NO:179); T97: (SEQ ID NO:180); T98: (SEQ ID NO:181); T99: (SEQ ID NO:182); T103: (SEQ ID NO:183); T212: (SEQ ID NO:184); T213: (SEQ ID NO:185); T214: (SEQ ID NO:186); T215: (SEQ ID NO:187); T216: (SEQ ID NO:188); T229: (SEQ ID NO:189); T230: (SEQ ID NO:-190); T231: (SEQ ID NO:191); T379: (SEQ ID NO:192); T701: (SEQ ID NO:193); T702: (SEQ ID NO:194); T703: (SEQ ID NO:195); T704: (SEQ ID NO:196); T705: (SEQ ID NO:197); T706: (SEQ ID NO:198); T156: (SEQ ID NO:199); T90: (SEQ ID NO:200)].

The peptides listed herein were derived from the region surrounding the HIV-1 BRU isolate DP178 region (e.g., gp41 amino acid residues 615-717).

In instances where peptides contained DP178 point mutations, the mutated amino acid residues are shown with a shaded background. In instances in which the test peptide has had an amino and/or carboxy-terminal group added or removed (apart from the standard amido- and acetyl-blocking groups found on such peptides), such modifications are indicated. FIGS. 49A, 49C: The column to the immediate right of the name of the test peptide indicates the size of the test peptide and points out whether the peptide is derived from a one amino acid peptide “walk” across the DP178 region. The next column to the right indicates whether the test peptide contains a point mutation, while the column to its right indicates whether certain amino acid residues have been added to or removed from the DP178-derived amino acid sequence. FIGS. 49E, 49G: The column to the immediate right of the test peptide name indicates whether the peptide represents a DP178 truncation, the next column to the right points out whether the peptide contains a point mutation, and the column to its right indicates whether the peptide contains amino acids which have been added to or removed from the DP178 sequence itself. FIGS. 49I, 49K: The column to the immediate right of the test peptide name indicates whether the test peptide contains a point mutation, while the column to its right is indicates whether amino acid residues have been added to or removed from the DP178 sequence itself. IC₅₀ is as defined in FIGS. 27A-F, and IC₅₀ values were obtained using purified peptides except where marked with an asterisk (*), in which case the IC₅₀ was obtained using a crude peptide preparation.

FIGS. 50A-B: DP107 and DP107 gp41 region truncated peptide antiviral data (SEQ ID NO:201). IC₅₀ as defined in FIGS. 27A-F, and IC₅₀ values were obtained using purified peptides except where marked with an asterisk (*), in which case the IC₅₀ was obtained using a crude peptide preparation.

FIGS. 51A-C: Epstein-Barr virus Strain B95-8 BZLF1 DP178/DP107 analog region peptide walks and electrophoretic mobility shift assay results. The peptides [173-219: (SEQ ID NO:202); 185-230: (SEQ ID NO:203); T-446: (SEQ ID NO:204); 197-242: (SEQ ID NO:205); T-458: (SEQ ID NO:206); 209-246: (SEQ ID NO:207)] (T-423 to T-434, FIG. 51A; T-435 to T-466, FIG. 51B; T-447 to T-449, T-451 to T-458 and T-459 to T-461, FIG. 51C) represent one amino acid residue “walks” through the EBV Zebra protein region from amino acid residue 173 to 246.

The amino acid residue within this region which corresponds to the first amino acid residue of each peptide is listed to the left of each peptide, while the amino acid residue within this region which corresponds to the last amino acid residue of each peptide is listed to the right of each peptide. The length of each test peptide is listed at the far right of each line, under the heading “Res”.

“ACT” refers to a test peptide's ability to inhibit Zebra binding to its response element. “+” refers to a visible, but incomplete, abrogation of the response element/Zebra homodimer complex; “+++” refers to a complete abrogation of the complex; and “−” represents a lack of complex disruption.

FIGS. 52A-B. Hepatitis B virus subtype AYW major surface antigen precursor S protein DP178/DP107 analog region and peptide walks. 52A depicts Domain I (SEQ ID NO:208) (S protein amino acid residues 174-219), which contains a potential DP178/DP107 analog region. In addition, peptides are listed which represent one amino acid peptide “walks” through domain I. 52B depicts Domain II (SEQ ID NO:209) (S protein amino acid residues 233-290), which contains a second potential DP178/DP107 analog region. In addition, peptides are listed which represent one amino acid peptide “walks” through domain II.

5. DETAILED DESCRIPTION OF THE INVENTION

Described herein are peptides which may exhibit antifusogenic activity, antiviral capability, and/or the ability to modulate intracellular processes involving coiled-coil peptide structures. The peptides described include, first, DP178 (SEQ ID NO:1), a gp41-derived 36 amino acid peptide and fragments and analogs of DP178.

In addition, the peptides of the invention described herein include peptides which are DP107 analogs. DP107 (SEQ ID NO:99) is a 38 amino acid peptide corresponding to residues 558 to 595 of the HIV-1_(LAI) transmembrane (TM) gp41 protein. Such DP107 analogs may exhibit antifusogenic capability, antiviral activity or an ability to modulate intracellular processes involving coiled-coil structures.

Further, peptides of the invention include DP107 and DP178 are described herein having amino acid sequences recognized by the 107×178×4, ALLMOTI5, and PLZIP search motifs. Such motifs are also discussed.

Also described here are antifusogenic, antiviral, intracellular modulatory, and diagnostic uses of the peptides of the invention. Further, procedures are described for the use of the peptides of the invention for the identification of compounds exhibiting antifusogenic, antiviral or intracellular modulatory activity.

While not limited to any theory of operation, the following model is proposed to explain the potent anti-HIV activity of DP178, based, in part, on the experiments described in the Examples, infra. In the HIV protein, gp41, DP178 corresponds to a putative α-helix region located in the C-terminal end of the gp41 ectodomain, and appears to associate with a distal site on gp41 whose interactive structure is influenced by the leucine zipper motif, a coiled-coil structure, referred to as DP107. The association of these two domains may reflect a molecular linkage or “molecular clasp” intimately involved in the fusion process. It is of interest that mutations in the C-terminal α-helix motif of gp41 (i.e., the D178 domain) tend to enhance the fusion ability of gp41, whereas mutations in the leucine zipper region (i.e., the DP107 domain) decrease or abolish the fusion ability of the viral protein. It may be that the leucine zipper motif is involved in membrane fusion while the C-terminal α-helix motif serves as a molecular safety to regulate the availability of the leucine zipper during virus-induced membrane fusion.

On the basis of the foregoing, two models are proposed of gp41-mediated membrane fusion which are schematically shown in FIGS. 11A-B. The reason for proposing two models is that the temporal nature of the interaction between the regions defined by DP107 and DP178 cannot, as yet, be pinpointed. Each model envisions two conformations for gp41—one in a “native” state as it might be found on a resting virion. The other in a “fusogenic” state to reflect conformational changes triggered following binding of gp120 to CD4 and just prior to fusion with the target cell membrane. The strong binding affinity between gp120 and CD4 may actually represent the trigger for the fusion process obviating the need for a pH change such as occurs for viruses that fuse within intracellular vesicles. The two major features of both models are: (1) the leucine zipper sequences (DP107) in each chain of oligomeric enveloped are held apart in the native state and are only allowed access to one another in the fusogenic state so as to form the extremely stable coiled-coils, and (2) association of the DP178 and DP107 sites as they exist in gp41 occur either in the native or fusogenic state. FIG. 11A depicts DP178/DP107 interaction in the native state as a molecular clasp. On the other hand, if one assumes that the most stable form of the enveloped occurs in the fusogenic state, the model in FIG. 11B can be considered.

When synthesized as peptides, both DP107 and DP178 are potent inhibitors of HIV infection and fusion, probably by virtue of their ability to form complexes with viral gp41 and interfere with its fusogenic process; e.g., during the structural transition of the viral protein from the native structure to the fusogenic state, the DP178 and DP107 peptides may gain access to their respective binding sites on the viral gp41, and exert a disruptive influence. DP107 peptides which demonstrate anti-HIV activity are described in Applicants' co-pending application Ser. No. 08/264,531, filed Jun. 23, 1994, which is incorporated by reference herein in its entirety.

As shown in the Examples, infra, a truncated recombinant gp41 protein corresponding to the ectodomain of gp41 containing both DP107 and DP178 domains (excluding the fusion peptide, transmembrane region and cytoplasmic domain of gp41) did not inhibit HIV-1 induced fusion. However, when a single mutation was introduced to disrupt the coiled-coil structure of the DP107 domain—a mutation which results in a total loss of biological activity of DP107 peptides—the inactive recombinant protein was transformed to an active inhibitor of HIV-1 induced fusion. This transformation may result from liberation of the potent DP178 domain from a molecular clasp with the leucine zipper, DP107 domain.

For clarity of discussion, the invention will be described primarily for DP178 peptide inhibitors of HIV. However, the principles may be analogously applied to other viruses, both enveloped and nonenveloped, and to other non-viral organisms.

5.1. DP178 AND DP178-LIKE PEPTIDES

The DP178 peptide (SEQ ID:1) of the invention corresponds to amino acid residues 638 to 673 of the transmembrane protein gp41 from the HIV-1_(LAI) isolate, and has the 36 amino acid sequence (reading from amino to carboxy terminus):

NH₂-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-COOH (SEQ ID:1)

In addition to the full-length DP178 (SEQ ID:1) 36-mer, the peptides of the invention may include truncations of the DP178 (SEQ ID:1) peptide which exhibit antifusogenic activity, antiviral activity and/or the ability to modulate intracellular processes involving coiled-coil peptide structures. Truncations of DP178 (SEQ ID:1) peptides may comprise peptides of between 3 and 36 amino acid residues (i.e., peptides ranging in size from a tripeptide to a 36-mer polypeptide), as shown in Tables I and IA, below. Peptide sequences in these tables are listed from amino (left) to carboxy (right) terminus. “X” may represent an amino group (—NH₂) and “Z” may represent a carboxyl (—COOH) group. Alternatively, “X” may represent a hydrophobic group, including but not limited to carbobenzyl, dansyl, or T-butoxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. Further, “Z” may represent an amido group; a T-butoxycarbonyl group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. A preferred “X” or “Z” macromolecular group is a peptide group.

TABLE I DP178 (SEQ ID NO:1) CARBOXY TRUNCATIONS* X-YTS-Z (SEQ ID NO:1) X-YTSL-Z X-YTSLI-Z X-YTSLIH-Z X-YTSLIHS-Z X-YTSLIHSL-Z X-YTSLIHSLI-Z X-YTSLIHSLIE-Z X-YTSLIHSLIEE-Z X-YTSLIHSLIEES-Z X-YTSLIHSLIEESQ-Z X-YTSLIHSLIEESQN-Z X-YTSLIHSLIEESQNQ-Z X-YTSLIHSLIEESQNQQ-Z X-YTSLIHSLIEESQNQQE-Z X-YTSLIHSLIEESQNQQEK-Z X-YTSLIHSLIEESQNQQEKN-Z X-YTSLIHSLIEESQNQQEKNE-Z X-YTSLIHSLIEESQNQQEKNEQ-Z X-YTSLIHSLIEESQNQQEKNEQE-Z X-YTSLIHSLIEESQNQQEKNEQEL-Z X-YTSLIHSLIEESQNQQEKNEQELL-Z X-YTSLIHSLIEESQNQQEKNEQELLE-Z X-YTSLIHSLIEESQNQQEKNEQELLEL-Z X-YTSLIHSLIEESQNQQEKNEQELLELD-Z X-YTSLIHSLIEESQNQQEKNEQELLELDK-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKW-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWA-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWAS-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWASL-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLW-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWN-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNW-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (*The one-letter amino acid code is used)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE IA DP178 (SEQ ID NO:1) AMINO TRUNCATIONS* (SEQ ID NO:1) X-NWF-Z X-WNWF-Z X-LWNWF-Z X-SLWNWF-Z X-ASLWNWF-Z X-WASLWNWF-Z X-KWASLWNWF-Z X-DKWASLWNWF-Z X-LDKWASLWNWF-Z X-ELDKWASLWNWF-Z X-LELDKWASLWNWF-Z X-LLELDKWASLWNWF-Z X-ELLELDKWASLWNWF-Z X-QELLELDKWASLWNWF-Z X-EQELLELDKWASLWNWF-Z X-NEQELLELDKWASLWNWF-Z X-KNEQELLELDKWASLWNWF-Z X-EKNEQELLELDKWASLWNWF-Z X-QEKNEQELLELDKWASLWNWF-Z X-QQEKNEQELLELDKWASLWNWF-Z X-NQQEKNEQELLELDKWASLWNWF-Z X-QNQQEKNEQELLELDKWASLWNWF-Z X-SQNQQEKNEQELLELDKWASLWNWF-Z X-ESQNQQEKNEQELLELDKWASLWNWF-Z X-EESQNQQEKNEQELLELDKWASLWNWF-Z X-IEESQNQQEKNEQELLELDKWASLWNWF-Z X-LIEESQNQQEKNEQELLELDKWASLWNWF-Z X-SLIEESQNQQEKNEQELLELDKWASLWNWF-Z X-HSLIEESQNQQEKNEQELLELDKWASLWNWF-Z X-IHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z X-LIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z X-SLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z X-TSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (*The one-letter amino acid code is used)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

The peptides of the invention also include DP178-like peptides. “DP178-like”, as used herein, refers, first, to DP178 and DP178 truncations which contain one or more amino acid substitutions, insertions and/or deletions. Second, “DP-178-like” refers to peptide sequences identified or recognized by the ALLMOTI5, 107×178×4 and PLZIP search motifs described herein, having structural and/or amino acid motif similarity to DP178. The DP178-like peptides of the invention may exhibit antifusogenic or antiviral activity, or may exhibit the ability to modulate intracellular processes involving coiled-coil peptides. Further, such DP178-like peptides may possess additional advantageous features, such as, for example, increased bioavailability, and/or stability, or reduced host immune recognition.

HIV-1 and HIV-2 enveloped proteins are structurally distinct, but there exists a striking amino acid conservation within the DP178-corresponding regions of HIV-1 and HIV-2. The amino acid conservation is of a periodic nature, suggesting some conservation of structure and/or function. Therefore, one possible class of amino acid substitutions would include those amino acid changes which are predicted to stabilize the structure of the DP178 peptides of the invention. Utilizing the DP178 and DP178 analog sequences described herein, the skilled artisan can readily compile DP178 consensus sequences and ascertain from these, conserved amino acid residues which would represent preferred amino acid substitutions.

The amino acid substitutions may be of a conserved or non-conserved nature. Conserved amino acid substitutions consist of replacing one or more amino acids of the DP178 (SEQ ID:1) peptide sequence with amino acids of similar charge, size, and/or hydrophobicity characteristics, such as, for example, a glutamic acid (E) to aspartic acid (D) amino acid substitution. Non-conserved substitutions consist of replacing one or more amino acids of the DP178 (SEQ ID:1) peptide sequence with amino acids possessing dissimilar charge, size, and/or hydrophobicity characteristics, such as, for example, a glutamic acid (E) to valine (V) substitution.

Amino acid insertions may consist of single amino acid residues or stretches of residues. The insertions may be made at the carboxy or amino terminal end of the DP178 or DP178 truncated peptides, as well as at a position internal to the peptide. Such insertions will generally range from 2 to 15 amino acids in length. It is contemplated that insertions made at either the carboxy or amino terminus of the peptide of interest may be of a broader size range, with about 2 to about 50 amino acids being preferred. One or more such insertions may be introduced into DP178 (SEQ.ID:1) or DP178 truncations, as long as such insertions result in peptides which may still be recognized by the 107×178×4, ALLMOTI5 or PLZIP search motifs described herein, or may, alternatively, exhibit antifusogenic or antiviral activity, or exhibit the ability to modulate intracellular processes involving coiled-coil peptide structures.

Preferred amino or carboxy terminal insertions are peptides ranging from about 2 to about 50 amino acid residues in length, corresponding to gp41 protein regions either amino to or carboxy to the actual DP178 gp41 amino acid sequence, respectively. Thus, a preferred amino terminal or carboxy terminal amino acid insertion would contain gp41 amino acid sequences found immediately amino to or carboxy to the DP178 region of the gp41 protein.

Deletions of DP178 (SEQ ID:1) or DP178 truncations are also within the scope of the invention. Such deletions consist of the removal of one or more amino acids from the DP178 or DP178-like peptide sequence, with the lower limit length of the resulting peptide sequence being 4 to 6 amino acids. Such deletions may involve a single contiguous or greater than one discrete portion of the peptide sequences. One or more such deletions may be introduced into DP178 (SEQ.ID:1) or DP178 truncations, as long as such deletions result in peptides which may still be recognized by the 107×178×4, ALLMOTI5 or PLZIP search motifs described herein, or may, alternatively, exhibit antifusogenic or antiviral activity, or exhibit the ability to modulate intracellular processes involving coiled-coil peptide structures.

DP178 analogs are further described, below, in Section 5.3.

5.2. DP107 AND DP107-LIKE PEPTIDES

Further, the peptides of the invention include peptides having amino acid sequences corresponding to DP107 analogs. DP107 is a 38 amino acid peptide which exhibits potent antiviral activity, and corresponds to residues 558 to 595 of HIV-1_(LAI) transmembrane (TM) gp41 protein, as shown here:

NH₂-NNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQ-COOH (SEQ ID NO:89)

In addition to the full-length DP107 38-mer, the peptides of the invention may include truncations of the DP107 peptide which exhibit antifusogenic activity, antiviral activity and/or the ability to modulate intracellular processes involving coiled-coil peptide structures. Truncations of DP107 peptides may comprise peptides of between 3 and 38 amino acid residues (i.e., peptides ranging in size from a tripeptide to a 38-mer polypeptide), as shown in Tables II and IIA, below. Peptide sequences in these tables are listed from amino (left) to carboxy (right) terminus. “X” may represent an amino group (—NH₂) and “Z” may represent a carboxyl (—COOH) group. Alternatively, “X” may represent a hydrophobic group, including but not limited to carbobenzyl, dansyl, or T-butoxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. Further, “Z” may represent an amido group; a T-butoxycarbonyl group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. A preferred “X” or “Z” macromolecular group is a peptide group.

TABLE II DP107 (SEQ ID NO:89) CARBOXY TRUNCATIONS* X-NNL-Z (SEQ ID NO:89) X-NNLL-Z X-NNLLR-Z X-NNLLRA-Z X-NNLLRAI-Z X-NNLLRAIE-Z X-NNLLRAIEA-Z X-NNLLRAIEAQ-Z X-NNLLRAIEAQQ-Z X-NNLLRAIEAQQH-Z X-NNLLRAIEAQQHL-Z X-NNLLRAIEAQQHLL-Z X-NNLLRAIEAQQHLLQ-Z X-NNLLRAIEAQQHLLQL-Z X-NNLLRAIEAQQHLLQLT-Z X-NNLLRAIEAQQHLLQLTV-Z X-NNLLRAIEAQQHLLQLTVW-Z X-NNLLRAIEAQQHLLQLTVWG-Z X-NNLLRAIEAQQHLLQLTVWGI-Z X-NNLLRAIEAQQHLLQLTVWGIK-Z X-NNLLRAIEAQQHLLQLTVWGIKQ-Z X-NNLLRAIEAQQHLLQLTVWGIKQL-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQ-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQA-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQAR-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARI-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARIL-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARILA-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARILAV-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARILAVE-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARILAVER-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARILAVERY-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYL-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLK-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKD-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQ-Z (*The one-letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE IIA DP107 (SEQ ID NO:89) AMINO TRUNCATIONS* (SEQ ID NO:89) X-KDQ-Z X-LKDQ-Z X-YLKDQ-Z X-RYLKDQ-Z X-ERYLKDQ-Z X-VERYLKDQ-Z X-AVERYLKDQ-Z X-LAVERYLKDQ-Z X-ILAVERYLKDQ-Z X-RILAVERYLKDQ-Z X-ARILAVERYLKDQ-Z X-QARILAVERYLKDQ-Z X-LQARILAVERYLKDQ-Z X-QLQARILAVERYLKDQ-Z X-KQLQARILAVERYLKDQ-Z X-IKQLQARILAVERYLKDQ-Z X-GIKQLQARILAVERYLKDQ-Z X-WGIKQLQARILAVERYLKDQ-Z X-VWGIKQLQARILAVERYLKDQ-Z X-TVWGIKQLQARILAVERYLKDQ-Z X-LTVWGIKQLQARILAVERYLKDQ-Z X-QLTVWGIKQLQARILAVERYLKDQ-Z X-LQLTVWGIKQLQARILAVERYLKDQ-Z X-LLQLTVWGIKQLQARILAVERYLKDQ-Z X-HLLQLTVWGIKQLQARILAVERYLKDQ-Z X-QHLLQLTVWGIKQLQARILAVERYLKDQ-Z X-QQHLLQLTVWGIKQLQARILAVERYLKDQ-Z X-AQQHLLQLTVWGIKQLQARILAVERYLKDQ-Z X-EAQQHLLQLTVWGIKQLQARILAVERYLKDQ-Z X-IEAQQHLLQLTVWGIKQLQARILAVERYLKDQ-Z X-AIEAQQHLLQLTVWGIKQLQARILAVERYLKDQ-Z X-RAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQ-Z X-LRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQ-Z X-LLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQ-Z X-NLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQ-Z X-NNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQ-Z (*The one-letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

The peptides of the invention also include DP107-like peptides. “DP107-like”, as used herein, refers, first, to DP107 and DP107 truncations which contain one or more amino acid substitutions, insertions and/or deletions. Second, “DP-107-like” refers to peptide sequences identified or recognized by the ALLMOTI5, 107×178×4 and PLZIP search motifs described herein, having structural and/or amino acid motif similarity to DP107. The DP107-like peptides of the invention may exhibit antifusogenic or antiviral activity, or may exhibit the ability to modulate intracellular processes involving coiled-coil peptides. Further, such DP107-like peptides may possess additional advantageous features, such as, for example, increased bioavailability, and/or stability, or reduced host immune recognition.

HIV-1 and HIV-2 enveloped proteins are structurally distinct, but there exists a striking amino acid conservation within the DP107-corresponding regions of HIV-1 and HIV-2. The amino acid conservation is of a periodic nature, suggesting some conservation of structure and/or function. Therefore, one possible class of amino acid substitutions would include those amino acid changes which are predicted to stabilize the structure of the DP107 peptides of the invention. Utilizing the DP107 and DP107 analog sequences described herein, the skilled artisan can readily compile DP107 consensus sequences and ascertain from these, conserved amino acid residues which would represent preferred amino acid substitutions.

The amino acid substitutions may be of a conserved or non-conserved nature. Conserved amino acid substitutions consist of replacing one or more amino acids of the DP107 peptide sequence with amino acids of similar charge, size, and/or hydrophobicity characteristics, such as, for example, a glutamic acid (E) to aspartic acid (D) amino acid substitution. Non-conserved substitutions consist of replacing one or more amino acids of the DP107 (SEQ ID:25) peptide sequence with amino acids possessing dissimilar charge, size, and/or hydrophobicity characteristics, such as, for example, a glutamic acid (E) to valine (V) substitution.

Amino acid insertions may consist of single amino acid residues or stretches of residues. The insertions may be made at the carboxy or amino terminal end of the DP107 or DP107 truncated peptides, as well as at a position internal to the peptide. Such insertions will generally range from 2 to 15 amino acids in length. It is contemplated that insertions made at either the carboxy or amino terminus of the peptide of interest may be of a broader size range, with about 2 to about 50 amino acids being preferred. One or more such insertions may be introduced into DP107 or DP107 truncations, as long as such insertions result in peptides which may still be recognized by the 107×178×4, ALLMOTI5 or PLZIP search motifs described herein, or may, alternatively, exhibit antifusogenic or antiviral activity, or exhibit the ability to modulate intracellular processes involving coiled-coil peptide structures.

Preferred amino or carboxy terminal insertions are peptides ranging from about 2 to about 50 amino acid residues in length, corresponding to gp41 protein regions either amino to or carboxy to the actual DP107 gp41 amino acid sequence, respectively. Thus, a preferred amino terminal or carboxy terminal amino acid insertion would contain gp41 amino acid sequences found immediately amino to or carboxy to the DP107 region of the gp41 protein.

Deletions of DP107 or DP178 truncations are also within the scope of the invention. Such deletions consist of the removal of one or more amino acids from the DP107 or DP107-like peptide sequence, with the lower limit length of the resulting peptide sequence being 4 to 6 amino acids. Such deletions may involve a single contiguous or greater than one discrete portion of the peptide sequences. One or more such deletions may be introduced into DP107 or DP107 truncations, as long as such deletions result in peptides which may still be recognized by the 107×178×4, ALLMOTI5 or PLZIP search motifs described herein, or may, alternatively, exhibit antifusogenic or antiviral activity, or exhibit the ability to modulate intracellular processes involving coiled-coil peptide structures.

DP107 and DP107 truncations are more fully described in Applicants' co-pending U.S. patent application Ser. No. 08/374,666, filed Jan. 27, 1995, and which is incorporated herein by reference in its entirety. DP107 analogs are further described, below, in Section 5.3.

5.3. DP107 and DP178 ANALOGS

Peptides corresponding to analogs of the DP178, DP178 truncations, DP107 and DP107 truncation sequences of the invention, described, above, in Sections 5.1 and 5.2 may be found in other viruses, including, for example, non-HIV-1_(LAI) enveloped viruses, non-enveloped viruses and other non-viral organisms.

The term “analog”, as used herein, refers to a peptide which is recognized or identified via the 107×178×4, ALLMOTI5 and/or PLZIP search strategies discussed below. Further, such peptides may exhibit antifusogenic capability, antiviral activity, or the ability to modulate intracellular processes involving coiled-coil structures.

Such DP178 and DP107 analogs may, for example, correspond to peptide sequences present in TM proteins of enveloped viruses and may, additionally correspond to peptide sequences present in non enveloped and non-viral organisms. Such peptides may exhibit antifusogenic activity, antiviral activity, most particularly antiviral activity which is specific to the virus in which their native sequences are found, or may exhibit an ability to modulate intracellular processes involving coiled-coil peptide structures.

DP178 analogs are peptides whose amino acid sequences are comprised of the amino acid sequences of peptide regions of, for example, other (i.e., other than HIV-1_(LAI)) viruses that correspond to the gp41 peptide region from which DP178 (SEQ ID:1) was derived. Such viruses may include, but are not limited to, other HIV-1 isolates and HIV-2 isolates. DP178 analogs derived from the corresponding gp41 peptide region of other (i.e., non HIV-1_(LAI)) HIV-1 isolates may include, for example, peptide sequences as shown below.

NH₂-YTNTIYTLLEESQNQQEKNEQELLELDKWASLWNWF-COOH (DP-185; SEQ ID:3);

NH₂-YTGIIYNLLEESQNQQEKNEQELLELDKWANLWNWF-COOH (SEQ ID:4);

NH₂-YTSLIYSLLEKSQIQQEKNEQELLELDKWASLWNWF-COOH (SEQ ID:5).

SEQ ID:3 (DP-185), SEQ ID:4, and SEQ ID:5 are derived from HIV-1_(SF2), HIV-1_(RF), and HIV-1_(MN) isolates, respectively. Underlined amino acid residues refer to those residues that differ from the corresponding position in the DP178 (SEQ ID:1) peptide. One such DP178 analog, DP-185 (SEQ ID:3), is described in the Example presented in Section 6, below, where it is demonstrated that DP-185 (SEQ ID:3) exhibits antiviral activity. The DP178 analogs of the invention may also include truncations, as described above. Further, the analogs of the invention modifications such those described for DP178 analogs in Section 5.1., above. It is preferred that the DP178 analogs of the invention represent peptides whose amino acid sequences correspond to the DP178 region of the gp41 protein, it is also contemplated that the peptides of the invention may, additionally, include amino sequences, ranging from about 2 to about 50 amino acid residues in length, corresponding to gp41 protein regions either amino to or carboxy to the actual DP178 amino acid sequence.

Striking similarities, as shown in FIG. 1, exist within the regions of HIV-1 and HIV-2 isolates which correspond to the DP178 sequence. A DP178 analog derived from the HIV-2_(NIHZ) isolate has the 36 amino acid sequence (reading from amino to carboxy terminus):

NH₂-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-COOH (SEQ ID:7)

Table III and Table IV show some possible truncations of the HIV-2_(NIHZ) DP178 analog, which may comprise peptides of between 3 and 36 amino acid residues (i.e., peptides ranging in size from a tripeptide to a 36-mer polypeptide). Peptide sequences in these tables are listed from amino (left) to carboxy (right) terminus. “X” may represent an amino group (—NH₂) and “Z” may represent a carboxyl (—COOH) group. Alternatively, “X” may represent a hydrophobic group, including but not limited to carbobenzyl, dansyl, or T-butoxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. Further, “Z” may represent an amido group; a T-butoxycarbonyl group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. A preferred “X” or “Z” macromolecular group is a peptide group.

TABLE III HIV-2_(NIHZ) DP178 ANALOG (SEQ ID NO:7) CARBOXY TRUNCATIONS*. X-LEA-Z (SEQ ID NO:7) X-LEAN-Z X-LEANI-Z X-LEANIS-Z X-LEANISQ-Z X-LEANISQS-Z X-LEANISQSL-Z X-LEANISQSLE-Z X-LEANISQSLEQ-Z X-LEANISQSLEQA-Z X-LEANISQSLEQAQ-Z X-LEANISQSLEQAQI-Z X-LEANISQSLEQAQIQ-Z X-LEANISQSLEQAQIQQ-Z X-LEANISQSLEQAQIQQE-Z X-LEANISQSLEQAQIQQEK-Z X-LEANISQSLEQAQIQQEKN-Z X-LEANISQSLEQAQIQQEKNM-Z X-LEANISQSLEQAQIQQEKNMY-Z X-LEANISQSLEQAQIQQEKNMYE-Z X-LEANISQSLEQAQIQQEKNMYEL-Z X-LEANISQSLEQAQIQQEKNMYELQ-Z X-LEANISQSLEQAQIQQEKNMYELQK-Z X-LEANISQSLEQAQIQQEKNMYELQKL-Z X-LEANISQSLEQAQIQQEKNMYELQKLN-Z X-LEANISQSLEQAQIQQEKNMYELQKLNS-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSW-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSWD-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSWDV-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSWDVF-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFT-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTN-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNW-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z (*The one-letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE IV HIV-2_(NIHZ) DP178 ANALOG (SEQ ID NO:7) AMINO TRUNCATIONS*. (SEQ ID NO:7) X-NWL-Z X-TNWL-Z X-FTNWL-Z X-VFTNWL-Z X-DVFTNWL-Z X-WDVFTNWL-Z X-SWDVFTNWL-Z X-NSWDVFTNWL-Z X-LNSWDVFTNWL-Z X-KLNSWDVFTNWL-Z X-QKLNSWDVFTNWL-Z X-LQKLNSWDVFTNWL-Z X-ELQKLNSWDVFTNWL-Z X-YELQKLNSWDVFTNWL-Z X-MYELQKLNSWDVFTNWL-Z X-NMYELQKLNSWDVFTNWL-Z X-KNMYELQKLNSWDVFTNWL-Z X-EKNMYELQKLNSWDVFTNWL-Z X-QEKNMYELQKLNSWDVFTNWL-Z X-QQEKNMYELQKLNSWDVFTNWL-Z X-IQQEKNMYELQKLNSWDVFTNWL-Z X-QIQQEKNMYELQKLNSWDVFTNWL-Z X-AQIQQEKNMYELQKLNSWDVFTNWL-Z X-QAQIQQEKNMYELQKLNSWDVFTNWL-Z X-EQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-LEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-SLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-QSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-SQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-ISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-NISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-ANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-EANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z (*The one-letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

DP178 and DP107 analogs are recognized or identified, for example, by utilizing one or more of the 107×178×4, ALLMOTI5 or PLZIP computer-assisted search strategies described and demonstrated, below, in the Examples presented in Sections 9 through 16 and 19 through 25. The search strategy identifies additional peptide regions which are predicted to have structural and/or amino acid sequence features similar to those of DP107 and/or DP178.

The search strategies are described fully, below, in the Example presented in Section 9. While this search strategy is based, in part, on a primary amino acid motif deduced from DP107 and DP178, it is not based solely on searching for primary amino acid sequence homologies, as such protein sequence homologies exist within, but not between major groups of viruses. For example, primary amino acid sequence homology is high within the TM protein of different strains of HIV-1 or within the TM protein of different isolates of simian immunodeficiency virus (SIV). Primary amino acid sequence homology between HIV-1 and SIV, however, is low enough so as not to be useful. It is not possible, therefore, to find peptide regions similar to DP107 or DP178 within other viruses, or within non-viral organisms, whether structurally, or otherwise, based on primary sequence homology, alone.

Further, while it would be potentially useful to identify primary sequence arrangements of amino acids based on, for example, the physical chemical characteristics of different classes of amino acids rather than based on the specific amino acids themselves, such search strategies have, until now, proven inadequate. For example, a computer algorithm designed by Lupas et al. to identify coiled-coil propensities of regions within proteins (Lupas, A., et al., 1991 Science 252:1162-1164) is inadequate for identifying protein regions analogous to DP107 or DP178.

Specifically, analysis of HIV-1 gp160 (containing both gp120 and gp41) using the Lupas algorithm does not identify the coiled-coil region within DP107. It does, however, identify a region within DP178 beginning eight amino acids N-terminal to the start of DP178 and ending eight amino acids from the C-terminus. The DP107 peptide has been shown experimentally to form a stable coiled coil. A search based on the Lupas search algorithm, therefore, would not have identified the DP107 coiled-coil region. Conversely, the Lupas algorithm identified the DP178 region as a potential coiled-coil motif. However, the peptide derived from the DP178 region failed to form a coiled coil in solution.

A possible explanation for the inability of the Lupas search algorithm to accurately identify coiled-coil sequences within the HIV-1 TM, is that the Lupas algorithm is based on the structure of coiled coils from proteins that are not structurally or functionally similar to the TM proteins of viruses, antiviral peptides (e.g. DP107 and DP178) of which are an object of this invention.

The computer search strategy of the invention, as demonstrated in the Examples presented below, in Sections 9 through 16 and 19 through 25, successfully identifies regions of proteins similar to DP107 or DP178. This search strategy was designed to be used with a commercially-available sequence database package, preferably PC/Gene.

A series of search motifs, the 107×178×4, ALLMOTI5 and PLZIP motifs, were designed and engineered to range in stringency from strict to broad, as discussed in this Section and in Section 9, with 107×178×4 being preferred. The sequences identified via such search motifs, such as those listed in Tables V-XIV, below, potentially exhibit antifusogenic, such as antiviral, activity, may additionally be useful in the identification of antifusogenic, such as antiviral, compounds, and are intended to be within the scope of the invention.

Coiled-coiled sequences are thought to consist of heptad amino acid repeats. For ease of description, the amino acid positions within the heptad repeats are sometimes referred to as A through G, with the first position being A, the second B, etc. The motifs used to identify DP107-like and DP178-like sequences herein are designed to specifically search for and identify such heptad repeats. In the descriptions of each of the motifs described, below, amino acids enclosed by brackets , i.e., [ ], designate the only amino acid residues that are acceptable at the given position, while amino acids enclosed by braces, i.e., { }, designate the only amino acids which are unacceptable at the given heptad position. When a set of bracketed or braced amino acids is followed by a number in parentheses i.e., ( ), it refers to the number of subsequent amino acid positions for which the designated set of amino acids hold, e.g, a (2) means “for the next two heptad amino acid positions”.

The ALLMOTI5 is written as follows:

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

Translating this motif, it would read: “at the first (A) position of the heptad, any amino acid residue except C, D, G, H, or P is acceptable, at the next two (B,C) amino acid positions, any amino acid residue except C, F, or P is acceptable, at the fourth heptad position (D), any amino acid residue except C, D, G, H, or P is acceptable, at the next three (E, F, G) amino acid positions, any amino acid residue except C, F, or P is acceptable. This motif is designed to search for five consecutive heptad repeats (thus the repeat of the first line five times), meaning that it searches for 35-mer sized peptides. It may also be designed to search for 28-mers, by only repeating the initial motif four times. With respect to the ALLMOTI5 motif, a 35-mer search is preferred. Those viral (non-bacteriophage) sequences identified via such an ALLMOTI5 motif are listed in Table V, below, at the end of this Section. The viral sequences listed in Table V potentially exhibit antiviral activity, may be useful in the the identification of antiviral compounds, and are intended to be within the scope of the invention. In those instances wherein a single gene exhibits greater than one sequence recognized by the ALLMOTI5 search motif, the amino acid residue numbers of these sequences are listed under “Area 2”, Area 3”, etc. This convention is used for each of the Tables listed, below, at the end of this Section.

The 107×178×4 motif is written as follows:

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

Translating this motif, it would read: “at the first (A) position of the heptad, only amino acid residue E, F, I, K, L, N, Q, S, T, V, W, or Y is acceptable, at the next two (B,C) amino acid positions, any amino acid residue except C, F, M or P is acceptable, at the fourth position (D), only amino acid residue E, F, I, K, L, N, Q, S, T, V, W, or Y is acceptable, at the next three (E, F, G) amino acid positions, any amino acid residue except C, F, M or P is acceptable. This motif is designed to search for four consecutive heptad repeats (thus the repeat of the first line four times), meaning that it searches for 28-mer sized peptides. It may also be designed to search for 35-mers, by repeating the initial motif five times. With respect to the 107×178×4 motif, a 28-mer search is preferred.

Those viral (non-bacteriophage) sequences identified via such a 107×78×4 motif are listed in Table VI, below, at the end of this Section, with those viral (non-bacteriophage) sequences listed in Table VII, below at the end of this Section, being preferred.

The 107×178×4 search motif was also utilized to identify non-viral procaryotic protein sequences, as listed in Table VIII, below, at the end of this Section. Further, this search motif was used to reveal a number of human proteins. The results of this human protein 107×178×4 search is listed in Table IX, below, at the end of this Section. The sequences listed in Tables VIII and IX, therefore, reveal peptides which may be useful as antifusogenic compounds or in the identification of antifusogenic compounds, and are intended to be within the scope of the invention.

The PLZIP series of motifs are as listed in FIG. 19. These motifs are designed to identify leucine zipper coiled-coil like heptads wherein at least one proline residue is present at some predefined distance N-terminal to the repeat. These PLZIP motifs find regions of proteins with similarities to HIV-1 DP178 generally located just N-terminal to the transmembrane anchor. These motifs may be translated according to the same convention described above. Each line depicted in FIG. 19 represents a single, complete search motif. “X” in these motifs refers to any amino acid residue. In instances wherein a motif contains two numbers within parentheses, this refers to a variable number of amino acid residues. For example, X(1, 12) is translated to “the next one to twelve amino acid residues, inclusive, may be any amino acid”.

Tables X through XIV, below, at the end of this Section, list sequences identified via searches conducted with such PLZIP motifs. Specifically, Table X lists viral sequences identified via PCTLZIP, P1CTLZIP and P2CTLZIP search motifs, Table XI lists viral sequences identified via P3CTLZIP, P4CTLZIP, P5CTLZIP and P6CTLZIP search motifs, Table XII lsts viral sequences identified via P7CTLZIP, P8CTLZIP and P9CTLZIP search motifs, Table XIII lists viral sequences identified via P12LZIPC searches and Table XIV lists viral sequences identified via P23TLZIPC search motifs The viral sequences listed in these tables represent peptides which potentially exhibit antiviral activity, may be useful in the identification of antiviral compounds, and are intended to be within the scope of the invention.

The Examples presented in Sections 17, 18, 26 and 27 below, demonstrate that viral sequences identified via the motif searches described herein identify substantial antiviral characteristics. Specifically, the Example presented in Section 17 describes peptides with anti-respiratory syncytial virus activity, the Example presented in Section 18 describes peptides with anti-parainfluenza virus activity, the Example presented in Section 26 describes peptides with anti-measles virus activity and the Example presented in Section 27 describes peptides with anti-simian immunodeficiency virus activity.

The DP107 and DP178 analogs may, further, contain any of the additional groups described for DP178, above, in Section 5.1. For example, these peptides may include any of the additional amino-terminal groups as described above for “X” groups, and may also include any of the carboxy-terminal groups as described, above, for “Z” groups.

Additionally, truncations of the identified DP107 and DP178 peptides are among the peptides of the invention. Further, such DP107 and DP178 analogs and DP107/DP178 analog truncations may exhibit one or more amino acid substitutions, insertion, and/or deletions. The DP178 analog amino acid substitutions, insertions and deletions, are as described, above, for DP178-like peptides in Section 5.1. The DP-107 analog amino acid substitutions, insertions and deletions are also as described, above, for DP107-like peptides in Section 5.2.

Tables XV through XXII, below, present representative examples of such DP107/DP178 truncations. Specifically, Table XV presents Respiratory Syncytial Virus F1 region DP107 analog carboxy truncations, Table XVI presents Respiratory Syncytial Virus F1 region DP107 analog amino truncations, Table XVII presents Respiratory Syncytial Virus F1 region DP178 analog carboxy truncations, Table XVIII presents Respiratory Syncytial Virus F1 region DP178 analog amino truncations, Table XIX presents Human Parainfluenza Virus 3 F1 region DP178 analog carboxy truncations, Table XX presents Human Parainfluenza Virus 3 F1 region DP178 analog amino truncations, Table XXI presents Human Parainfluenza Virus 3 F1 region DP107 analog carboxy truncations and Table XXII presents Human Parainfluenza Virus 3 F1 region DP107 analog amino truncations. Further, Table XXIII, below, presents DP107/DP178 analogs and analog truncations which exhibit substantial antiviral activity. These antiviral peptides are grouped according to the specific virus which they inhibit, including respiratory syncytial virus, human parainfluenza virus 3, simian immunodeficiency virus and measles virus.

TABLE V ALLMOTI5 SEARCH RESULTS SUMMARY FOR ALL VIRAL (NON-BACTERIOPHAGE) PROTEINS PCGENE ALLMOTI5 All Viruses (no bacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 P170K_TRVPS POTENTIAL 170 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PSG) 113-153 P194K_TRVSY POTENTIAL 194 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN SYM 144-178 214-248 391-446 644-678 1045- 1135- 1335- 1618- 1079 1176 1376 1656 P55KD_HSV6U 55 8 KD PROTEIN HERPES SIMPLEX VIRUS 228-262 (TYPE 6/STRAIN UGANDA-1102) PAANT_HDVAM DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN)  3-48 100-144 PAANT_HDVD3 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE D380)  7-48 100-144 PAANT_HDVTT DELTA ANTIGEN (ALPHA ANTIGEN) HEPATITIS DELTA VIRUS (ISOLATE ITALIAN)  3-48 100-144 PAANT_HDVL1 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE LEBANON-1)  3-48 PAANT_HDVM1 DELTA ANTIGEN HEPATITIS DELTA VIRUS  3-48 100-144 (ISOLATE JAPANESE M-1) PAANT_HDVM2 DELTA ANTIGEN HEPATITIS DELTA VIRUS  3-48 100-144 (ISOLATE JAPANESE M-2) PAANT_HDVNA DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE NAURU)  3-48 100-144 PAANT_HDVS1 DELTA ANTIGEN HEPATITIS DELTA VIRUS  1-49 100-144 (ISOLATE JAPANESE S-1) PAANT_HDVS2 DELTA ANTIGEN HEPATITIS DELTA VIRUS  1-49 100-144 (ISOLATE JAPANESE S-2) PAANT_HDVWO DELTA ANTIGEN HEPATITIS DELTA VIRUS  3-48 100-144 (ISOLATE WOODCHUCK) PAT3H_FOWPM ANTITHROMBIN-III HOMOLOG FOWLPOX VIRUS (ISOLATE HP-438)  71-110 PAT11_VACCV 94 KD A-TYPE INCLUSION PROTEIN VACCINIA VIRUS (STRAIN WR) 14-57 420-564 570-625 PAT11_VARV 81 KD A-TYPE INCLUSION PROTEIN VARIOLA VIRUS 425-525 531-565 571-628 PAT12_HSV11 ALPHA TRANS-INDUCING FACTOR HERPES SIMPLEX VIRUS (TYPE 1) 304-345 PAT12_HSV1F ALPHA TRANS-INDUCING FACTOR HERPES SIMPLEX VIRUS (TYPE 1) 102-139 304-345 PAT12_HSVEB ALPHA TRANS-INDUCING FACTOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 101-147 268-331 PAT12_VACCC PUTATIVE A-TYPE INCLUSION PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  79-124 219-263 PAT12_VACCV PUTATIVE A-TYPE INCLUSION PROTEIN VACCINIA VIRUS  79-124 PAT12_VZVD ALPHA TRANS-INDUCING FACTOR VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 298-361 395-429 PAT13_VACCV PUTATIVE A-TYPE INCLUSION PROTEIN VACCINIA VIRUS 51-95 PATIN_HSV23 ALPHA TRANS-INDUCING PROTEIN (VMW65) HERPES SIMPLEX VIRUS (TYPE 2) 178-219 324-381 PATIN_HSV2H ALPHA TRANS-INDUCING PROTEIN (VMW65) HERPES SIMPLEX VIRUS (TYPE 2) 177-222 324-381 PATIN_HSVBP ALPHA TRANS-INDUCING PROTEIN BOVINE HERPESVIRUS TYPE 1 195-256 PATIN_HSVEB ALPHA TRANS-INDUCING PROTEIN EQUINE HERPESVIRUS TYPE 1 241-289 PATIN_VZVD ALPHA TRANS-INDUCING PROTEIN ( VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 206-252 PATI_COWPX A-TYPE INCLUSION PROTEIN COWPOX VIRUS 14-57 426-526 532-566 572-629 803-989 1106- 1150 PBDL2_EBV PROTEIN BDLF2 EPSTEIN-BARR VIRUS (STRAIN B95-8)  90-131 PBRL1_EBV TRANSCRIPTION ACTIVATOR BRLF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 150-187 PCOA1_POVBA COAT PROTEIN VP1 POLYOMAVIRUS BK 107-141 PCOA1_POVBK COAT PROTEIN VP1 POLYOMAVIRUS BK 107-141 PCOA1_POVHA COAT PROTEIN VP1 HAMSTER POLYOMAVIRUS 159-195 PCOA1_SV40 COAT PROTEIN VP1 SIMIAN VIRUS 40 109-143 PCOA2_BFDV COAT PROTEIN VP2 BUDGERIGAR FLEDGLING DISEASE VIRUS 141-213 PCOA2_POVBA COAT PROTEIN VP2 POLYOMAVIRUS BK (STRAIN AS) 14-64 317-351 PCOA2_POVBK COAT PROTEIN VP2 POLYOMAVIRUS BK 14-64 317-351 PCOA2_POVBO COAT PROTEIN VP2 BOVINE POLYOMAVIRUS 35-76 153-216 PCOA2_POVHA COAT PROTEIN VP2 HAMSTER POLYOMAVIRUS  7-48 174-208 PCOA2_POVIC COAT PROTEIN VP2 POLYOMAVIRUS JC 14-64 233-267 PCOA2_POVLY COAT PROTEIN VP2 LYMPHOTROPIC POLYOMAVIRUS 14-78 156-206 PCOA2_POVM3 COAT PROTEIN VP2 MOUSE POLYOMAVIRUS (STRAIN 3)  5-72 137-185 PCOA2_POVMA COAT PROTEIN VP2 MOUSE POLYOMAVIRUS  5-72 137-185 PCOA2_POVMC COAT PROTEIN VP2 MOUSE POLYOMAVIRUS  5-72 137-185 PCOA2_POVMK COAT PROTEIN VP2 MOUSE POLYOMAVIRUS 15-56 177-211 PCOA2_SV40 COAT PROTEIN VP2 SIMIAN VIRUS 40 14-62 228-262 318-352 PCOAT_ABMVW COAT PROTEIN ABUTIL ON MOSAIC VIRUS 180-214 (ISOLATE WEST INDIA PCOAT_ACLSV COAT PROTEIN APPLE CHLOROTIC LEAF SPOT VIRUS 154-188 PCOAT_AEDEV COAT PROTEIN VP1 AEDES DENSONUCLEOSIS VIRUS 243-284 PCOAT_AMCV COAT PROTEIN ARTICHOKE MOTTLED CRINKLE VIRUS 36-70 100-134 PCOAT_BLRV COAT PROTEIN BEAN LEAFROLL VIRUS  89-123 PCOAT_BMV COAT PROTEIN BROME MOSAIC VIRUS 36-73 PCOAT_BYDV1 COAT PROTEIN BARLEY YELLOW DWARF VIRUS 163-197 PCOAT_BYDVM COAT PROTEIN BARLEY YELLOW DWARF VIRUS 163-197 PCOAT_BYDVP COAT PROTEIN BARLEY YELLOW DWARF VIRUS 164-198 PCOAT_BYDVR COAT PROTEIN BARLEY YELLOW DWARF VIRUS 164-198 PCOAT_CAMVC COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN 56-90 186-223 PCOAT_CAMVD COAT PROTEIN CAULIFLOWER MOSAIC VIRUS 53-91 187-224 PCOAT_CAMVE COAT PROTEIN CAULIFLOWER MOSAIC VIRUS 56-90 186-223 PCOAT_CAMVN COAT PROTEIN CAULIFLOWER MOSAIC VIRUS 56-90 185-222 PCOAT_CAMVS COAT PROTEIN CAULIFLOWER MOSAIC VIRUS 53-91 187-224 PCOAT_CARMV COAT PROTEIN CARNATION MOTTLE VIRUS 13-51 PCOAT_CCMV COAT PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 141-178 PCOAT_CERV PROBABLE COAT PROTEIN CARNATION ETCHED RING VIRUS 192-226 PCOAT_CHVP1 MAJOR CAPSID PROTEIN PARAMECIUM BURSARIA CHLORELLA VIRUS 1 393-435 PCOAT_CLVK COAT PROTEIN CASSAVA LATENT VIRUS 197-231 PCOAT_CLVN COAT PROTEIN CASSAVA LATENT VIRUS 197-231 PCOAT_CMVFC COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT_CMVI COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT_CMVP6 COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT_CMVQ COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT_CMVWL COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT_CMVY COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT_CNV COAT PROTEIN CUCUMBER NECROSIS VIRUS 328-365 PCOAT_CSMV COAT PROTEIN CHLORIS STRIATE MOSAIC VIRUS 184-218 PCOAT_CTV36 COAT PROTEIN CITRUS TRISTEZA VIRUS  79-120 PCOAT_CYMV COAT PROTEIN CLOVER YELLOW MOSAIC VIRUS 162-204 PCOAT_EPMV COAT PROTEIN EGGPLANT MOSAIC VIRUS 40-74 PCOAT_FCVC6 COAT PROTEIN FELINE CALICIVIRUS 432-466 566-600 PCOAT_FCVF4 COAT PROTEIN FELINE CALICIVIRUS 502-550 566-600 PCOAT_FCVF9 COAT PROTEIN FELINE CALICIVIRUS 519-553 569-603 PCOAT_FMVD PROBABLE COAT PROTEIN FIGWORT MOSAIC VIRUS 144-199 206-247 449-483 PCOAT_FXMV COAT PROTEIN FOXTAIL MOSAIC VIRUS 168-220 PCOAT_IRV1 CAPSID PROTEIN TIPULA IRIDESCENT VIRUS  90-124 PCOAT_IRV22 CAPSID PROTEIN SIMULIUM IRIDESCENT VIRUS  90-124 PCOAT_IRV6 CAPSID PROTEIN CHILO IRIDESCENT VIRUS 51-85 PCOAT_LSV COAT PROTEIN LILY SYMPTOMLESS VIRUS 32-70 255-289 PCOAT_MSTV COAT PROTEIN MAIZE STRIPE VIRUS  7-76  84-121 PCOAT_MSVK COAT PROTEIN MAIZE STREAK VIRUS 187-221 PCOAT_MSVN COAT PROTEIN MAIZE STREAK VIRUS 187-221 PCOAT_MSVS COAT PROTEIN MAIZE STREAK VIRUS 187-221 PCOAT_ORSV COAT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS 105-139 PCOAT_PAVBO COAT PROTEIN VP2 BOVINE PARVOVIRUS 380-414 444-480 PCOAT_PAVC7 COAT PROTEIN VP1 CANINE PARVOVIRUS 497-531 PCOAT_PEBV COAT PROTEIN PEA EARLY BROWNING VIRUS  73-114 PCOAT_POPMV COAT PROTEIN POPLAR MOSAIC VIRUS 36-81 PCOAT_PPMVS COAT PROTEIN PEPPER MILD MOTTLE VIRUS 104-138 PCOAT_PVSP COAT PROTEIN POTATO VIRUS 38-72 251-292 PCOAT_PYMVV COAT PROTEIN POTATO YELLOW MOSAIC VIRUS 190-224 PCOAT_RBDV COAT PROTEIN RASPBERRY BUSHY DWARF VIRUS 10-44 140-199 PCOAT_RCNMV COAT PROTEIN RED CLOVER NECROTIC MOSAIC VIRUS 272-306 PCOAT_RSV COAT PROTEIN RICE STRIPE VIRUS 34-68  83-120 259-309 PCOAT_SLCV COAT PROTEIN SQUASH LEAF CURL VIRUS 190-224 PCOAT_SMWLM COAT PROTEIN SATELLITE MAIZE WHITE LINE MOSAIC VIRUS  66-100 PCOAT_SOCMV COAT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 128-166 PCOAT_STNV1 COAT PROTEIN SATELLITE TOBACCO NECROSIS VIRUS 1  2-50 PCOAT_STNV2 COAT PROTEIN SATELLITE TOBACCO NECROSIS VIRUS 2 38-72 PCOAT_TAMV GENOME POLYPROTEIN TAMARILLO MOSAIC VIRUS  7-55 PCOAT_TAV COAT PROTEIN TOMATO ASPERMY VIRUS 14-48 PCOAT_TBSVB COAT PROTEIN TOMATO BUSHY STUNT VIRUS  1-37 43-77 PCOAT_TBSVC COAT PROTEIN TOMATO BUSHY STUNT VIRUS 44-78 100-134 PCOAT_TCV COAT PROTEIN TURNIP CRINKLE VIRUS 12-46 PCOAT_TGMV COAT PROTEIN TOMATO GOLDEN MOSAIC VIRUS 186-220 PCOAT_TMGMV COAT PROTEIN TOBACCO MILD GREEN MOSAIC VIRUS 103-137 PCOAT_TMV COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMV06 COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMVCO COAT PROTEIN TOBACCO MOSAIC VIRUS  76-138 PCOAT_TMVDA COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMVER COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMVHR COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMVO COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMVOM COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMVTO COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TRVCA COAT PROTEIN TOBACCO RATTLE VIRUS  71-109 PCOAT_TRVTC COAT PROTEIN TOBACCO RATTLE VIRUS  69-103 PCOAT_TYDVA COAT PROTEIN TOBACCO YELLOW DWARF VIRUS  2-36 PCOAT_TYMV COAT PROTEIN TURNIP YELLOW MOSAIC VIRUS 41-75 PCOAT_TYMVA COAT PROTEIN TURNIP YELLOW MOSAIC VIRUS 41-75 PCOAT_WCMVO COAT PROTEIN WHITE CLOVER MOSAIC VIRUS 163-197 PCORA_HPBGS CORE ANTIGEN GROUND SQUIRREL HEPATITIS VIRUS  94-135 PCORA_HPBV9 CORE ANTIGEN HEPATITIS B VIRUS 111-149 PCORA_WHV1 CORE ANTIGEN WOODCHUCK HEPATITIS VIRUS 1  62-106 PCORA_WHV8 CORE ANTIGEN WOODCHUCK HEPATITIS VIRUS 8  62-106 PD250_ASFB7 PROTEIN D250R AFRICAN SWINE FEVER VIRUS 198-232 PDNB2_ADE02 EARLY E2A DNA-BINDING PROTEIN HUMAN ADENOVIRUS TYPE 2 291-336 PDNB2_ADE05 EARLY E2A DNA-BINDING PROTEIN HUMAN ADENOVIRUS TYPE 5 291-336 PDNB1_EBV MAJOR DNA-BINDING PROTEIN EPSTEIN-BARR VIRUS 25-252 718-752  974- 1027- 1009 1068 PDNB1_HCMVA MAJOR DNA-BINDING PROTEIN HUMAN CYTOMEGALOVIRUS 338-372 1013- 1070 PDNB1_HSV11 MAJOR DNA-BINDING PROTEIN HERPES SIMPLEX VIRUS 557-595 599-640 769-803 1079- 1140 PDNB1_HSV1F MAJOR DNA-BINDING PROTEIN HERPES SIMPLEX VIRUS 557-595 599-640 769-803 1079- 1140 PDNB1_HSV1K MAJOR DNA-BINDING PROTEIN HERPES SIMPLEX VIRUS 557-595 599-640 769-803 1079- 1140 PDNB1_HSVB2 MAJOR DNA-BINDING PROTEIN BOVINE HERPESVIRUS TYPE 2 552-591 599-633 1048- 1131 PDNB1_HSVE1 MAJOR DNA-BINDING PROTEIN EQUINE HERPESVIRUS TYPE 1 273-314 PDNB1_HSVEB MAJOR DNA-BINDING PROTEIN EQUINE HERPESVIRUS TYPE 1 617-658 1107- 1148 PDNB1_HSVSA MAJOR DNA-BINDING PROTEIN HERPESVIRUS SAIMIRI 222-259 330-367 506-557 873-907 PDNB1_MCMVS MAJOR DNA-BINDING PROTEIN MURINE CYTOMEGALOVIRUS 584-618  987- 1125 PDNB1_SCMVC MAJOR DNA-BINDING PROTEIN SIMIAN CYTOMEGALOVIRUS 525-562 PDNB1_VZVD MAJOR DNA-BINDING PROTEIN VARICELLA-ZOSTER VIRUS 613-650 1043- 1077 PDNL1_ASFM2 DNA LIGASE AFRICAN SWINE FEVER VIRUS  72-106 PDNL1_VACCC DNA LIGASE VACCINIA VIRUS 395-436 PDNL1_VACCV DNA LIGASE VACCINIA VIRUS 395-436 PDNL1_VARV DNA LIGASE VARIOLA VIRUS 395-436 PDPOL_ADE02 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 2 667-743 PDPOL_ADE05 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 5 667-743 PDPOL_ADE07 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 7 733-809 PDPOL_ADE12 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 12 665-741 PDPOL_CBEPV DNA POLYMERASE CHORISTONEURA BIENNIS ENTOMOPOXVIRUS 23-64 202-240 PDPOL_CHVN2 DNA POLYMERASE CHLORELLA VIRUS NY-2A 247-284 PDPOL_CHVP1 DNA POLYMERASE PARAMECIUM BURSARIA CHLORELLA VIRUS 1 247-284 PDPOL_FOWPV DNA POLYMERASE FOWLPOX VIRUS 17-51  80-114 371-412 PDPOL_HCMVA DNA POLYMERASE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 753-787 1033- 1074 PDPOL_HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS  5-39 PDPOL_HPBDC DNA POLYMERASE DUCK HEPATITIS B VIRUS (STRAIN CHINA)  5-39 PDPOL_HPBDW DNA POLYMERASE DUCK HEPATITIS B VIRUS  5-39 297-338 (WHITE SHANGHAI DUCK ISOLATE S3 PDPOL_HPBGS DNA POLYMERASE GROUND SQUIRREL HEPATITIS VIRUS 291-325 PDPOL_HPBHE DNA POLYMERASE HERON HEPATITIS B VIRUS  5-39 224-265 557-595 PDPOL_HPBVY DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE AYW) 201-235 PDPOL_HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE ADYW) 201-235 PDPOL_HSV11 DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 511-559 PDPOL_HSV1A DNA POLYMERASE HERPES SIMPLEX VIRUS 511-559 (TYPE 1/STRAIN ANGELOTTI PDPOL_HSV1K DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 511-559 PDPOL_HSV1S DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN SC16) 511-559 PDPOL_HSV21 DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 186) 512-560 PDPOL_HSVEB DNA POLYMERASE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 494-528 PDPOL_HSV11 DNA POLYMERASE ICTALURID HERPESVIRUS 1 33-67 328-366 401-435 706-749 808-858 (CHANNEL CATFISH VIRUS) PDPOL_NPVAC DNA POLYMERASE AUTOGRAPHA CALIFORNICA NUCLEAR 595-646 POLYHEDROSIS VIRUS PDPOL_VACCC DNA POLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN) 627-683 770-818 828-862 PDPOL_VACCV DNA POLYMERASE VACCINIA VIRUS (STRAIN WR) 627-683 770-818 828-862 PDPOL_VARV DNA POLYMERASE VARIOLA VIRUS 626-682 769-817 827-861 PDPOL_VZVD DNA POLYMERASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 473-533 PDPOL_WHV1 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 1 285-326 PDPOL_WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 59 290-331 PDPOL_WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 7 290-331 PDPOL_WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 289-330 PDPOL_WHV81 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 290-331 (INFECTIOUS CLONE) PDPOM_HPBVY DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE AYW) 201-235 PDUT_HSVEB DEOXYURIDINE 5′-TRIPHOSPHATE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P 135-169 NUCLEOTIDOHY PDUT_HSVSA DEOXYURIDINE 5′-TRIPHOSPHATE HERPESVIRUS SAIMIRI (STRAIN 11) 179-223 NUCLEOTIDOHY PE1A_ADE41 EARLY E1A 27 KD PROTEIN HUMAN ADENOVIRUS TYPE 41 107-141 PE1BL_ADE40 E1B PROTEIN, LARGE T-ANTIGEN HUMAN ADENOVIRUS TYPE 40 102-166 PE1BS_ADE02 E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 2 103-137 PE1BS_ADE05 E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 5 103-137 PE1BS_ADE12 E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 12  96-131 PE1BS_ADE40 E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 40 100-134 PE1BS_ADE41 E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 41 100-134 PE1BS_ADEM1 E1B PROTEIN, SMALL T-ANTIGEN MOUSE ADENOVIRUS TYPE 1 119-173 PE314_ADE02 EARLY E3B 14 KD PROTEIN HUMAN ADENOVIRUS TYPE 2  2-39 PE314_ADE03 EARLY E3 15.3 KD PROTEIN HUMAN ADENOVIRUS TYPE 3  8-49 PE314_ADE05 EARLY E3 14.5 KD PROTEIN HUMAN ADENOVIRUS TYPE 5  2-39 PE314_ADE07 EARLY E3 15.3 KD PROTEIN HUMAN ADENOVIRUS TYPE 7  7-48 PE320_ADE35 EARLY E3 20.3 KD GLYCOPROTEIN HUMAN ADENOVIRUS TYPE 35  70-107 PE321_ADE35 EARLY E3 20.6 KD GLYCOPROTEIN HUMAN ADENOVIRUS TYPE 35 125-169 PE411_ADE02 PROBABLE EARLY E4 11 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 10-44 PE411_ADE05 PROBABLE EARLY E4 11 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 10-44 PEAR_EBV EARLY ANTIGEN PROTEIN R EPSTEIN-BARR VIRUS (STRAIN B95-8) 123-157 PEBN4_EBV EBNA-4 NUCLEAR PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 487-521 PEFT1_VARV EARLY TRANSCRIPTION FACTOR VARIOLA VIRUS 23-71 307-341 70 KD SUBUNIT PENV1_FRSFV ENV POLYPROTEIN PRECURSOR FRIEND SPLEEN FOCUS-FORMING VIRUS 341-375 PENV2_FRSFV ENV POLYPROTEIN PRECURSOR FRIEND SPLEEN FOCUS-FORMING VIRUS 341-378 PENV_AVIRE ENV POLYPROTEIN AVIAN RETICULOENDOTHELIOSIS VIRUS 420-472 PENV_AVISN ENV POLYPROTEIN AVIAN SPLEEN NECROSIS VIRUS 426-478 PENV_BAEVM ENV POLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 390-456 PENV_BIV06 ENV POLYPROTEIN PRECURSOR BOVINE IMMUNODEFICIENCY VIRUS 10-44  88-122 221-255 530-610 635-691 (ISOLATE 106) PENV_BIV27 ENV POLYPROTEIN PRECURSOR BOVINE IMMUNODEFICIENCY VIRUS 10-44  88-122 159-193 250-284 559-639 664-724 (ISOLATE 127) PENV_BLVAF ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (AMERICAN ISOLATE FLK) PENV_BLVAU ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (AUSTRALIAN ISOLATE) PENV_BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (AMERICAN ISOLATE VDM) PENV_BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (BELGIUM ISOLATE LB285) PENV_BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (BELGIUM ISOLATE LB59) PENV_BLVJ ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (JAPANESE ISOLATE BLV-1) PENV_CAEVC ENV POLYPROTEIN PRECURSOR CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 157-196 615-720 751-785 847-895 (STRAIN CORK) PENV_CAEVG ENV POLYPROTEIN PRECURSOR CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 154-193 613-718 749-783 845-893 (STRAIN G63) PENV_EIAV1 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 668-716 (CLONE P3.2-1) PENV_EIAV2 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-692 (CLONE P3.2-2) PENV_EIAV3 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (CLONE P3.2-3) PENV_EIAV5 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 38-76 437-526 560-594 659-693 (CLONE P3.2-5) PENV_EIAV9 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (CLONE 1369) PENV_EIAVC ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (CLONE CL22) PENV_EIAVW ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (STRAIN WSU5) PENV_EIAVY ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (ISOLATE WYOMING) PENV_FENV1 ENV POLYPROTEIN PRECURSOR FELINE ENDOGENOUS VIRUS ECE1 503-555 567-604 PENV_FIVPE ENVELOPE POLYPROTEIN PRECURSOR FELINE IMMUNODEFICIENCY VIRUS 610-690 715-756 (ISOLATE PETALUMA) PENV_FIVSD ENVELOPE POLYPROTEIN PRECURSOR FELINE IMMUNODEFICIENCY VIRUS 601-688 713-754 (ISOLATE SAN DIEGO) PENV_FIVT2 ENVELOPE POLYPROTEIN PRECURSOR FELINE IMMUNODEFICIENCY VIRUS  60-122 609-689 714-755 (ISOLATE TM2) PENV_FLVC6 ENV POLYPROTEIN PRECURSOR FELINE LEUKEMIA PROVIRUS (CLONE CFE-6) 497-549 561-595 PENV_FLVGL ENV POLYPROTEIN PRECURSOR FELINE LEUKEMIA VIRUS 478-530 542-576 (STRAIN A/GLASGOW-1) PENV_FLVLB ENV POLYPROTEIN PRECURSOR FELINE LEUKEMIA VIRUS 498-550 562-596 (STRAIN LAMBDA-B1) PENV_FLVSA ENV POLYPROTEIN PRECURSOR FELINE LEUKEMIA VIRUS (STRAIN SARMA) 475-527 539-573 PENV_FOAMV ENV POLYPROTEIN HUMAN SPUMARETROVIRUS  1-41 154-205 321-355 563-693 866-903 PENV_FSVGA ENV POLYPROTEIN PRECURSOR FELINE SARCOMA VIRUS 498-550 562-596 (STRAIN GARDNER-ARNSTEIN) PENV_FSVGB ENV POLYPROTEIN PRECURSOR FELINE SARCOMA VIRUS 478-530 542-576 (STRAIN GA) PENV_FSVSM ENV POLYPROTEIN PRECURSOR FELINE SARCOMA VIRUS 481-524 545-579 (STRAIN SM) PENV_FSVST ENV POLYPROTEIN PRECURSOR FELINE SARCOMA VIRUS 498-532 (STRAIN SNYDER-THEILEN) PENV_GALV ENV POLYPROTEIN PRECURSOR GIBBON APE LEUKEMIA VIRUS 523-575 587-621 PENV_HTL1A ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 321-383 (STRAIN ATK) PENV_HTL1C ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 316-383 (CARIBBEAN ISOLATE) PENV_HTL1M ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 321-383 (ISOLATE MT-2) PENV_HTLV2 ENV POLYPROTEIN PRECURSOR HUMAN T-CELL LEUKEMIA VIRUS TYPE II 317-377 PENV_HV1A2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 497-593 612-711 766-845 PRECURSOR (ARV2/SF2 ISOLATE PENV_HV1B1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-594 610-712 767-843 PRECURSOR (BH10 ISOLATE) PENV_HV1B8 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-589 605-707 762-838 PRECURSOR (BH8 ISOLATE) PENV_HV1BN ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-365 501-590 609-708 763-831 PRECURSOR (CONT (BRAIN ISOLATE) PENV_HV1BR ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 510-599 615-717 772-841 PRECURSOR (BRU ISOLATE) PENV_HV1C4 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 342-376 510-606 626-724 779-855 PRECURSOR (CDC-451 ISOLATE) PENV_HV1EL ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 502-591 607-709 768-829 PRECURSOR (ELI ISOLATE) PENV_HV1H2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-594 610-712 767-836 PRECURSOR (HXB2 ISOLATE) PENV_HV1H3 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-594 610-712 767-843 PRECURSOR (HXB3 ISOLATE) PENV_HV1J3 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-377 517-605 622-723 778-843 PRECURSOR (JH3 ISOLATE) PENV_HV1JR ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 329-363 497-586 603-704 759-835 PRECURSOR (JRCSF ISOLATE) PENV_HV1KB ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  88-122 338-372 511-545 555-599 618-677 681-718 772-848 PRECURSOR (STRAIN KB-1-GP32) PENV_HV1MA ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 259-300 507-596 617-714 770-825 PRECURSOR (MAL ISOLATE) PENV_HV1MF ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 503-592 622-710 765-841 PRECURSOR (MFA ISOLATE) PENV_HV1MN ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 336-370 506-595 617-713 774-841 PRECURSOR (MN ISOLATE) PENV_HV1N5 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 326-360 PRECURSOR (NEW YORK-5 ISOL PENV_HV1ND ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 249-290 495-584 601-702 757-825 PRECURSOR (NDK ISOLATE) PENV_HV1OY ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 336-370 497-593 610-711 766-842 PRECURSOR (OY1 ISOLATE) PENV_HV1PV ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-594 610-712 767-843 PRECURSOR (PV22 ISOLATE) PENV_HV1RH ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 344-378 507-603 619-721 776-852 PRECURSOR (RF/HAT ISOLATE) PENV_HV1S1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 496-585 602-703 758-830 PRECURSOR (SF162 ISOLATE) PENV_HV1S3 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 332-366 494-590 607-708 763-837 PRECURSOR (SF33 ISOLATE) PENV_HV1SC ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-365 498-594 611-712 767-834 PRECURSOR (SC ISOLATE) PENV_HV1W1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-365 498-594 611-712 767-836 PRECURSOR (WMJ1 ISOLATE) PENV_HV1W2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 327-361 489-584 602-703 758-827 PRECURSOR (WMJ2 ISOLATE) PENV_HV1Z2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 502-591 610-709 764-831 PRECURSOR (Z2/CDC-Z34 ISOLAT PENV_HV1Z3 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 251-292 PRECURSOR (ZAIRE 3 ISOLATE) PENV_HV1Z6 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 256-297 504-593 609-711 766-840 PRECURSOR (ZAIRE 6 ISOLATE) PENV_HV1Z8 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 266-307 512-601 617-675 682-719 774-831 PRECURSOR (Z-84 ISOLATE) PENV_HV1ZH ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 522-594 612-671 675-712 777-839 PRECURSOR (ZAIRE HZ321 ISOLA PENV_HV2BE ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 447-481 510-595 617-680 PRECURSOR (ISOLATE BEN) PENV_HV2CA ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 512-597 619-709 PRECURSOR (ISOLATE CAM2) PENV_HV2D1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 501-586 608-698 PRECURSOR (ISOLATE D194) PENV_HV2G1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 439-473 502-587 609-699 PRECURSOR (ISOLATE GHANA-1) PENV_HV2NZ ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 488-587 609-699 PRECURSOR (ISOLATE NIH-Z) PENV_HV2RO ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 511-596 618-708 PRECURSOR (ISOLATE ROD) PENV_HV2S2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 442-476 505-590 612-702 PRECURSOR (ISOLATE ST/24.1C# PENV_HV2SB ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 526-588 614-700 PRECURSOR (ISOLATE SBLISY) PENV_HV2ST ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 442-476 505-590 612-702 PRECURSOR (ISOLATE ST) PENV_IPMAE ENV POLYPROTEIN PRECURSOR MOUSE INTRACISTERNAL A-PARTICLE 367-422 465-527 PENV_JSRV ENV POLYPROTEIN PRECURSOR SHEEP PULMONARY ADENOMATOSIS VIRUS 403-455 571-605 PENV_MCFF ENV POLYPROTEIN PRECURSOR MINK CELL FOCUS-FORMING MURINE 473-525 537-571 LEUKEMIA VIRUS PENV_MCFF3 ENV POLYPROTEIN PRECURSOR MINK CELL FOCUS-FORMING MURINE 474-526 538-572 (COAT POLYPROTE LEUKEMIA VIRUS (ISOLA PENV_MLVAV ENV POLYPROTEIN PRECURSOR AKV MURINE LEUKEMIA VIRUS 503-555 567-601 PENV_MLVCB ENV POLYPROTEIN PRECURSOR CAS-BR-E MURINE LEUKEMIA VIRUS 498-550 562-596 PENV_MLVF5 ENV POLYPROTEIN PRECURSOR FRIEND MURINE LEUKEMIA VIRUS (ISOLATE 57) 520-564 576-610 PENV_MLVFF ENV POLYPROTEIN PRECURSOR FRIEND MURINE LEUKEMIA VIRUS 520-564 576-610 (ISOLATE FB29) PENV_MLVFP ENV POLYPROTEIN PRECURSOR FRIEND MURINE LEUKEMIA VIRUS 520-564 576-610 (ISOLATE PVC-211) PENV_MLVHO ENV POLYPROTEIN PRECURSOR HOMULV MURINE LEUKEMIA VIRUS 504-551 563-597 PENV_MLVKI ENV POLYPROTEIN KIRSTEN MURINE LEUKEMIA VIRUS 40-92 104-138 PENV_MLVMO ENV POLYPROTEIN PRECURSOR MOLONEY MURINE LEUKEMIA VIRUS 502-554 566-600 PENV_MLVRD ENV POLYPROTEIN PRECURSOR RADIATION MURINE LEUKEMIA VIRUS 497-549 561-595 PENV_MLVRK ENV POLYPROTEIN PRECURSOR RADIATION MURINE LEUKEMIA VIRUS 497-549 561-595 (STRAIN KAPLAN) PENV_MMTVB ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 477-539 556-612 PENV_MMTVG ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 477-539 556-612 PENV_MPMV ENV POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 408-474 PENV_MSVFB ENV POLYPROTEIN FBJ MURINE OSTEOSARCOMA VIRUS 43-95 107-141 PENV_OMVVS ENV POLYPROTEIN PRECURSOR OVINE LENTIVIRUS (STRAIN SA-OMVV) 22-64 185-223 664-746 780-816 PENV_RMCFV ENV POLYPROTEIN PRECURSOR RAUSCHER MINK CELL FOCUS-INDUCING VIRUS 484-528 540-574 PENV_RSFFV ENV POLYPROTEIN PRECURSOR RAUSCHER SPLEEN FOCUS-FORMING VIRUS 342-376 PENV_SFV1 ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1)  1-41 101-140 154-205 321-355 563-651 658-693 866-904 PENV_SFV3L ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/  5-46 158-209 319-357 560-706 863-901 STRAIN LK3) PENV_SIVA1 ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 269-310 551-623 643-693 PRECURSOR (AGM155 ISOLATE) PENV_SIVAG ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 556-628 651-699 808-852 PRECURSOR (AGM3 ISOLATE) PENV_SIVAI ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 257-291 336-370 535-607 627-684 792-840 PRECURSOR (ISOLATE AGM/CLONE GR1 PENV_SIVAT ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 264-298 549-621 644-692 796-833 PRECURSOR (TYO-1 ISOLATE) PENV_SIVCZ ENVELOPE POLYPROTEIN GP160 CHIMPANZEE IMMUNODEFICIENCY VIRUS 253-291 330-365 512-584 669-703 803-837 PRECURSOR (SIV(CPZ)) PENV_SIVGB ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 566-654 677-725 PRECURSOR (ISOLATE GB1) PENV_SIVM1 ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 114-151 465-506 528-613 635-725 809-864 PRECURSOR (MM142-83 ISOLATE) PENV_SIVM2 ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS  71-109 161-219 245-286 PRECURSOR (MM251 ISOLATE) PENV_SIVMX ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 464-505 540-612 638-724 PRECURSOR (K6W ISOLATE) PENV_SIVML ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 464-505 540-612 638-724 PRECURSOR (K78 ISOLATE) PENV_SIVS4 ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 466-509 517-616 638-728 812-853 PRECURSOR (F236/SMH4 ISOLATE) PENV_SIVSP ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 470-513 521-620 642-732 811-848 PRECURSOR (PBJ/BC13 ISOLATE) PENV_SMRVH ENV POLYPROTEIN PRECURSOR SQUIRREL MONKEY RETROVIRUS (SMRV-H) 400-466 PENV_SRV1 ENV POLYPROTEIN SIMIAN RETROVIRUS SRV-1 409-475 PENV_VILV ENV POLYPROTEIN PRECURSOR VISNA LENTIVIRUS (STRAIN 1514) 21-62 184-222 637-740 773-809 PENV_VILV1 ENV POLYPROTEIN PRECURSOR VISNA LENTIVIRUS 21-62 184-222 643-746 780-816 (STRAIN 1514/CLONE LV1-1KS1) PENV_VILV2 ENV POLYPROTEIN PRECURSOR VISNA LENTIVIRUS 21-62 184-222 645-748 782-818 (STRAIN 1514/CLONE LV1-1KS2) PERBA_AVIER ERBA ONCOGENE PROTEIN AVIAN ERYTHROBLASTOSIS VIRUS 106-140 (STRAIN ES4) PETF1_FOWP1 EARLY TRANSCRIPTION FACTOR FOWLPOX VIRUS (STRAIN F.P-1) 190-224 553-587 70 KD SUBUNIT PETF1_SFVKA EARLY TRANSCRIPTION FACTOR SHOPE FIBROMA VIRUS (STRAIN KASZA) 37-71 267-340 550-587 70 KD SUBUNIT PETF1_VACCC EARLY TRANSCRIPTION FACTOR VACCINIA VIRUS (STRAIN COPENHAGEN) 23-71 307-341 70 KD SUBUNIT PETF1_VACCV EARLY TRANSCRIPTION FACTOR VACCINIA VIRUS (STRAIN WR) 23-71 307-341 70 KD SUBUNIT PETF2_VACCC EARLY TRANSCRIPTION FACTOR VACCINIA VIRUS (STRAIN COPENHAGEN) 52-97 174-208 82 KD SUBUNIT PETF2_VARV EARLY TRANSCRIPTION FACTOR VARIOLA VIRUS 52-97 174-208 82 KD SUBUNIT PEXON_HCMVA ALKALINE EXONUCLEASE HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  80-114 PEXON_HSVEB ALKALINE EXONUCLEASE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)  89-141 PEXON_PRVN3 ALKALINE EXONUCLEASE PSEUDORABIES VIRUS (STRAIN NIA-3)  82-120 PEXON_VZVD ALKALINE EXONUCLEASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 109-157 342-383 PFIB2_ADE40 41.4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 182-237 PFIB2_ADE41 41.4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 182-223 PFIBP_ADE03 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 3 156-194 PFIBP_ADE07 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 7 176-210 PFIBP_ADE40 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 303-352 PFIBP_ADE41 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 320-366 PFIBP_ADEB3 FIBER PROTEIN BOVINE ADENOVIRUS TYPE 3 181-215 585-626 PFOSX_MSVFR V-FOS/FOX TRANSFORMING PROTEIN FBR MURINE OSTEOSARCOMA VIRUS 131-169 PFOS_AVINK P55-V-FOS TRANSFORMING PROTEIN AVIAN RETROVIRUS NK24 109-152 PFOS_MSVFB P55-V-FOS TRANSFORMING PROTEIN FBJ MURINE OSTEOSARCOMA VIRUS 155-193 PGAGC_AVISC P47(GAG-CRK) PROTEIN AVIAN SARCOMA VIRUS (STRAIN CT10)  57-101 PGAG_AVEV1 GAG POLYPROTEIN AVIAN ENDOGENOUS VIRUS EV-1 57-94 PGAG_AVEV2 GAG POLYPROTEIN AVIAN ENDOGENOUS ROUS-ASSOCIATED  6-43 VIRUS-0 PGAG_AVIMC GAG POLYPROTEIN AVIAN MYELOCYTOMATOSIS VIRUS MC29 57-94 PGAG_AVIMD GAG POLYPROTEIN AVIAN MYELOCYTOMATOSIS VIRUS HBI 57-94 PGAG_AVISU CORE PROTEIN P19 AVIAN SARCOMA VIRUS (STRAIN UR2) 57-94 PGAG_AVISY GAG POLYPROTEIN AVIAN SARCOMA VIRUS (STRAIN Y73) 57-94 PGAG_BIV06 GAG POLYPROTEIN (P53) BOVINE IMMUNODEFICIENCY VIRUS  1-41 (ISOLATE 106) PGAG_EIAVY GAG POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS  61-118 (CLONE CL22) PGAG_FIVPE GAG POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS  76-110 (ISOLATE PETALUMA) PGAG_FIVSD GAG POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS  76-110 (ISOLATE SAN DIEGO) PGAG_FIVT2 GAG POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS  76-110 (ISOLATE TM2) PGAG_FLV GAG POLYPROTEIN FELINE LEUKEMIA VIRUS 496-537 PGAG_FOAMV GAG POLYPROTEIN HUMAN SPUMARETROVIRUS 130-186 391-425 439-480 607-655 PGAG_FSVMD GAG POLYPROTEIN FELINE SARCOMA VIRUS (STRAIN MCDONOUGH) 499-534 PGAG_FUJSV GAG POLYPROTEIN FUJINAMI SARCOMA VIRUS 57-94 PGAG_GALV GAG POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 393-444 PGAG_HV1A2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  87-133 294-328 (ARV2/SF2 ISOLATE PGAG_HV1B1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (BH10 ISOLATE) PGAG_HV1B5 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (BH5 ISOLATE) PGAG_HV1BR GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (BRU ISOLATE) PGAG_HV1C4 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (CDC-451 ISOLATE) PGAG_HV1EL GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  93-131 292-326 (ELI ISOLATE) PGAG_HV1H2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (HXB2 ISOLATE) PGAG_HV1J3 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  87-131 292-326 (JH3 ISOLATE) PGAG_HV1JR GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  87-131 292-326 (JRCSF ISOLATE) PGAG_HV1MA GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-137 (MAL ISOLATE) PGAG_HV1MN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  87-134 295-329 (MN ISOLATE) PGAG_HV1N5 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (NEW YORK-5 ISOL PGAG_HVIND GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  87-128 289-323 (NDK ISOLATE) PGAG_HV1OY GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (OYI ISOLATE) PGAG_HV1PV GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (PV22 ISOLATE) PGAG_HV1RH GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (RF/HAT ISOLATE) PGAG_HV1U4 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  87-127 (STRAIN UGANDAN PGAG_HV1W2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 292-326 (WMJ2 ISOLATE) PGAG_HV1Z2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  87-132 293-327 (Z2/CDC-Z34 ISOLAT PGAG_HV2SB GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 292-326 293-327 (ISOLATE SBLISY) PGAG_IPHA RETROVIRUS-RELATED GAG POLYPROTEIN HAMSTER INTRACISTERNAL A-PARTICLE  93-127 320-357 PGAG_IPMA RETROVIRUS-RELATED GAG POLYPROTEIN MOUSE INTRACISTERNAL A-PARTICLE  67-103 PGAG_IPMAE RETROVIRUS-RELATED GAG POLYPROTEIN MOUSE INTRACISTERNAL A-PARTICLE  89-133 138-172 PGAG_JSRV GAG POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 470-504 PGAG_MMTVB GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6)  83-151 156-190 PGAG_MMTVG GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN GR)  83-151 156-190 PGAG_MPMV GAG POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 222-260 PGAG_RSVP GAG POLYPROTEIN ROUS SARCOMA VIRUS (STRAIN PRAGUE C) 57-94 PGAG_SCVLA MAJOR COAT PROTEIN SACCHAROMYCES CEREVISIAE VIRUS L-A 102-139 490-531 (SCV-L-A) PGAG_SFV1 GAG POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 128-177 378-416 583-634 PGAG_SFV3L GAG POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/ 373-407 435-522 591-632 STRAIN LK3) PGAG_SIVA1 GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 302-336 (AGM155 ISOLATE) PGAG_SIVAG GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 306-340 (AGM3 ISOLATE) PGAG_SIVAI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 183-217 473-507 (ISOLATE AGM/CLONE GR1 PGAG_SIVAT GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 302-336 (TYO-1 ISOLATE) PGAG_SIVCZ GAG POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 301-335 (SIV(CPZ)) PGAG_SIVGB GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 163-204 223-267 283-317 (ISOLATE GB1) PGAG_SMSAV GAG POLYPROTEIN SIMIAN SARCOMA VIRUS 394-431 PHELI_HSV11 PROBABLE HELICASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 172-206 769-820 PHELI_HSV2H PROBABLE HELICASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 468-502 670-721 PHELI_HSVSA PROBABLE HELICASE HERPESVIRUS SAIMIRI (STRAIN 11) 158-203 413-449 599-633 PHELI_VZVD PROBABLE HELICASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 445-517 782-821 PHEMA_CVBF HEMAGGLUTININ-ESTERASE PRECURSOR BOVINE CORONAVIRUS (STRAIN F15) 208-242 PHEMA_CVBLY HEMAGGLUTININ-ESTERASE PRECURSOR BOVINE CORONAVIRUS (STRAIN LY-138) 208-242 PHEMA_CVBM HEMAGGLUTININ-ESTERASE PRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS) 208-242 PHEMA_CVBQ HEMAGGLUTININ-ESTERASE PRECURSOR BOVINE CORONAVIRUS (STRAIN QUEBEC), 208-242 PHEMA_CVHOC HEMAGGLUTININ-ESTERASE PRECURSOR HUMAN CORONAVIRUS (STRAIN OC43) 208-242 PHEMA_IAAIC HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/AICHI/2/68) 380-456 PHEMA_IABAN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/BANGKOK/1/79) 364-440 PHEMA_IABUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PHEMA_IACKA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/CHICKEN/ALABAMA/1/75) PHEMA_IACKG HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 108-142 375-475 494-528 (STRAIN A/CHICKEN/GERMANY/N/49) PHEMA_IACKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 360-452 487-532 (STRAIN A/CHICKEN/PENNSYLVANIA/1/83) PHEMA_IACKQ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 360-452 487-532 (STRAIN A/CHICKEN/PENNSYLVANIA/1370/ PHEMA_IACKS HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-469 504-549 (STRAIN A/CHICKEN/SCOTLAND/59) PHEMA_IACKV HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 377-469 (STRAIN A/CHICKEN/VICTORIA/1/85) PHEMA_IADA1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/DUCK/ALBERTA/28/76) PHEMA_IADA2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-476 495-547 (STRAIN A/DUCK/ALBERTA/60/76) PHEMA_IADA3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-453 (STRAIN A/DUCK/ALBERTA/78/76) PHEMA_IADA4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-478 506-548 (STRAIN A/DUCK/ALBERTA/35/76) PHEMA_IADCZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/DUCK/CZECHOSLOVAKIA/56) PHEMA_IADE1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 377-472 (STRAIN A/DUCK/ENGLAND/1/56) PHEMA_IADH1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/5/77) PHEMA_IADH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/8/80) PHEMA_IADH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/33/80) PHEMA_IADH4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/7/82) PHEMA_IADH5 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/21/82) PHEMA_IADH6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/9/85) PHEMA_IADH7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/10/85) PHEMA_IADIR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-471 506-551 (STRAIN A/DUCK/IRELAND/113/83) PHEMA_IADM1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAIN A/DUCK/MEMPHIS/546/76) PHEMA_IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/DUCK/MEMPHIS/928/74) PHEMA_IADNY HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAIN A/DUCK/NEW YORK/12/78) PHEMA_IADNZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/DUCK/NEW ZEALAND/31/76) PHEMA_IADU1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAIN A/DUCK/UKRAINE/1/60) PHEMA_IADU3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/DUCK/UKRAINE/1/63) PHEMA_IAEN7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/ENGLAND/321/77 PHEMA_IAFPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-477 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PHEMA_IAGRE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/GREY TEAL/AUSTRALIA/2/79) PHEMA_IAGU2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-473 (STRAIN A/GULL/MARYLAND/704/77) PHEMA_IAGUA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-476 (STRAIN A/GULL/ASTRAKHAN/227/84) PHEMA_IAHAL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/ALGIERS/72) PHEMA_IAHC6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/CAMBRIDGE/1/63) PHEMA_IAHC7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/CAMBRIDGE/1/73) PHEMA_IAHCD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 360-484 503-537 (STRAIN A/EQUINE/C.DETROIT/1/64) PHEMA_IAHDE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 360-484 503-537 (STRAIN A/EQUINE/DETROIT/1/64) PHEMA_IAHFO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/FONTAINEBLEAU/76) PHEMA_IAHK6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/KENTUCKY/2/86) PHEMA_IAHK7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/KENTUCKY/1/87) PHEMA_IAHLE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/LEXINGTON/1/66) PHEMA_IAHLO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/LONDON/1416/73) PHEMA_IAHMI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/MIAMI/1/63 PHEMA_IAHNM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/NEW MARKET/76) PHEMA_IAHNN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/NEW MARKET/1/77) PHEMA_IAHPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/PRAGUE/1/56) PHEMA_IAHRO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/ROMANIA/80) PHEMA_IAHSA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/SANTIAGO/1/85) PHEMA_IAHSP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/SAO PAULO/1/76) PHEMA_IAHSW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/SWITZERLAND/137/72) PHEMA_IAHTE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/TENNESSEE/5/86) PHEMA_IAHTO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/TOKYO/71) PHEMA_IAHUR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/URUGUAY/1/63) PHEMA_IAJAP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 375-467 502-547 (STRAIN A/STRAIN A/JAPAN/305/57 PHEMA_IAKIE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 376-478 506-541 (STRAIN A/KIEV/59/79) PHEMA_IALEN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 376-478 506-548 (STRAIN A/LENINGRAD/54/1) PHEMA_IAMAA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-453 (STRAIN A/MALLARD/ASTRAKHAN/244/82) PHEMA_IAMAB HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 382-458 (STRAIN A/MALLARD/ASTRAKHAN/263/82) PHEMA_IAMAO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/MALLARD/NEW YORK/6874/78) PHEMA_IAME1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/MEMPHIS/1/71) PHEMA_IAME2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/MEMPHIS/102/72) PHEMA_IAME6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/MEMPHIS/6/86) PHEMA_IAMIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 108-142 375-475 (STRAIN A/MINKS/SWEDEN/84) PHEMA_IANT6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/NT/60/68) PHEMA_IAPIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-477 496-534 (STRAIN A/PILOT WHALE/MAINE/328/84) PHEMA_IAPUE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 376-478 506-548 (STRAIN A/PUERTO RICO/8/34) PHEMA_IARUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/RUDDY TURNSTONE/NEW JERSE PHEMA_IASE2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/SEAL/MASSACHUSETTS/133/82) PHEMA_IASH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-474 506-552 (STRAIN A/SHEARWATER/AUSTRALIA/72) PHEMA_IASTA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 377-469 (STRAIN A/STARLING/VICTORIA/5156/85) PHEMA_IATKI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-471 506-551 (STRAIN A/TURKEY/IRELAND/1378/83) PHEMA_IATKM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/TURKEY/MINNESOTA/833/80 PHEMA_IATKO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 392-470 504-548 (STRAIN A/TURKEY/ONTARIO/7732/66) PHEMA_IATKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 493-540 (STRAIN A/TURKEY/ONTARIO/6118/68) PHEMA_IATKR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 30-64 374-474 (STRAIN A/TURKEY/OREGON/71) PHEMA_IATKW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 373-472 487-539 (STRAIN A/TURKEY/WISCONSIN/1/66) PHEMA_IATRA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAIN A/TERN/AUSTRALIA/G70C/75) PHEMA_IAUDO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 387-456 (STRAIN A/UDORN/307/72) PHEMA_IAUSS HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 376-478 506-548 (STRAIN A/USSR/90/77 PHEMA_IAVI7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 381-457 (STRAIN A/VICTORIA/3/75) PHEMA_IAWIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 375-477 505-547 (STRAIN A/WILSON-SMITH/33) PHEMA_IAZCO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/SWINE/COLORADO/1/77) PHEMA_IAZH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/SWINE/HONG KONG/81/78) PHEMA_IAZH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/SWINE/HONG KONG/126/82) PHEMA_IAZIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-478 506-548 (STRAIN A/SWINE/INDIANA/1726/88) PHEMA_IAZNJ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-478 506-547 (STRAIN A/SWINE/NEW JERSEY/11/76) PHEMA_IAZUK HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/SWINE/UKKEL/1/84 PHEMA_INBBE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 388-473 (STRAIN B/BEIJING/1/87 PHEMA_INBBO HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 378-463 (STRAIN B/BONN/43) PHEMA_INBEN HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 386-471 (STRAIN B/ENGLAND/222/82) PHEMA_INBHK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 381-463 (STRAIN B/HONG KONG/8/73) PHEMA_INBLE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 387-472 (STRAIN B/LEE/40) PHEMA_INBMD HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 377-462 (STRAIN B/MARYLAND/59) PHEMA_INBME HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 381-468 (STRAIN B/MEMPHIS/6/86) PHEMA_INBOR HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 386-471 (STRAIN B/OREGON/5/80) PHEMA_INBSI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 386-471 (STRAIN B/SINGAPORE/222/79) PHEMA_INBUS HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 379-464 (STRAIN B/USSR/100/83) PHEMA_INBVI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 381-466 (STRAIN B/VICTORIA/3/85) PHEMA_INBVK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 388-473 (STRAIN B/VICTORIA/2/87) PHEMA_INCCA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-571 (STRAIN C/CALIFORNIA/78) PHEMA_INCEN HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/ENGLAND/892/83) PHEMA_INCGL HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/GREAT LAKES/1167/54) PHEMA_INCHY HEMAGGLUTININ INFLUENZA C VIRUS 470-558 (STRAIN C/HYOGO/1/83) PHEMA_INCJH HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 484-572 (STRAIN C/JOHANNESBURG/1/66) PHEMA_INCKY HEMAGGLUTININ INFLUENZA C VIRUS 470-558 (STRAIN C/KYOTO/41/82) PHEMA_INCMI HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 470-558 (STRAIN C/MISSISSIPPI/80) PHEMA_INCNA HEMAGGLUTININ INFLUENZA C VIRUS 470-558 (STRAIN C/NARA/82) PHEMA_INCP1 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/PIG/BEIJING/10/81) PHEMA_INCP2 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/PIG/BEIJING/115/81) PHEMA_INCP3 MEASLES VIRUS (STRAIN HALLE) INFLUENZA C VIRUS 471-559 (STRAIN C/PIG/BEIJING/439/82) PHEMA_INCTA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/TAYLOR/1233/47 PHEMA_INCYA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/YAMAGATA/10/81) PHEMA_MEASE HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS (STRAIN EDMONSTON) 46-90 PHEMA_MEASH HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS (STRAIN HALLE) 46-90 PHEMA_MEASI HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS (STRAIN IP-3-CA) 46-87 PHEMA_MEASY HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS (STRAIN YAMAGATA-1) 46-87 PHEMA_MUMP1 HEMAGGLUTININ-NEURAMINIDASE MUMPS VIRUS (STRAIN SBL-1 34-99 PHEMA_MUMPM HEMAGGLUTININ-NEURAMINIDASE MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 34-99 PHEMA_MUMPR HEMAGGLUTININ-NEURAMINIDASE MUMPS VIRUS (STRAIN RW) 34-99 PHEMA_MUMPS HEMAGGLUTININ-NEURAMINIDASE MUMPS VIRUS (STRAIN SBL) 34-99 PHEMA_NDVA HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS  8-52 477-529 (STRAIN AUSTRALIA-VICTORIA/32) PHEMA_NDVB HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS  1-49 (STRAIN BEAUDETTE C/45) PHEMA_NDVD HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS  1-52 (STRAIN D26/76) PHEMA_NDVM HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS  1-52 (STRAIN MIYADERA/51) PHEMA_NDVQ HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS  1-52 (STRAIN QUEENSLAND/66) PHEMA_NDVTG HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS  1-49 (STRAIN TEXAS G B/48) PHEMA_NDVU HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS  1-52 (STRAIN ULSTER/67) PHEMA_PHODV HEMAGGLUTININ-NEURAMINIDASE PHOCINE DISTEMPER VIRUS 39-73 PHEMA_PI1HW HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 1 VIRUS  66-110 (STRAIN WASHINGTON/1957) PHEMA_PI2H HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 2 VIRUS 247-281 PHEMA_PI2HT HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 2 VIRUS 247-281 (STRAIN TOSHIBA) PHEMA_PI3B HEMAGGLUTININ-NEURAMINIDASE BOVINE PARAINFLUENZA 3 VIRUS 38-93 PHEMA_PI3H4 HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS  13-110 394-428 (STRAIN NIH 47885) PHEMA_PI3HA HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS  20-110 394-428 (STRAIN AUS/124854/74) PHEMA_PI3HT HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS  13-110 394-428 (STRAIN TEX/545/80) PHEMA_PI3HU HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS  13-110 394-428 (STRAIN TEX/9305/82) PHEMA_PI3HV HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS  13-110 394-428 (STRAIN TEX/12677/83) PHEMA_PI3HW HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS  13-110 394-428 (STRAIN WASH/641/79) PHEMA_PI3HX HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS  13-110 394-428 (STRAIN WASH/1511/73) PHEMA_PI4HA HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 4A VIRUS 54-88 (STRAIN TOSHIBA) PHEMA_RACVI HEMAGGLUTININ PRECURSOR RACCOON POXVIRUS 166-214 256-290 PHEMA_RINDK HEMAGGLUTININ-NEURAMINIDASE RINDERPEST VIRUS (STRAIN KABETE O) 46-87 PHEMA_RINDL HEMAGGLUTININ-NEURAMINIDASE RINDERPEST VIRUS (STRAIN L) 46-87 191-225 PHEMA_SEND5 HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN Z/HOST MUTANTS)  57-110 PHEMA_SENDF HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN FUSHIMI)  57-110 PHEMA_SENDH HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN HARRIS)  57-110 PHEMA_SENDJ HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN HVJ)  57-110 PHEMA_SENDZ HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN Z)  57-110 PHEMA_SV41 HEMAGGLUTININ-NEURAMINIDASE SIMIAN VIRUS 41 18-52 387-421 PHEMA_SV5 HEMAGGLUTININ-NEURAMINIDASE SIMIAN VIRUS 5 (STRAIN W3) 27-82 PHEMA_SV5LN HEMAGGLUTININ-NEURAMINIDASE SIMIAN VIRUS 5 (ISOLATE HUMAN/LN) 27-82 PHEMA_VARV HEMAGGLUTININ PRECURSOR VARIOLA VIRUS 177-211 PHEX3_ADE02 PERIPENTONAL HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 2  90-134 PROTEIN PHEX3_ADE05 PERIPENTONAL HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 5  90-134 PROTEIN PHEX9_ADE02 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 2  85-134 PHEX9_ADE05 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 5  85-134 PHEX9_ADE07 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 7,  93-138 AND HUMAN ADENOVIRUS TYPE PHEX9_ADE12 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 12  88-137 PHEX9_ADE41 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 41  67-126 PHEX9_ADEC2 HEXON-ASSOCIATED PROTEIN CANINE ADENOVIRUS TYPE 2  53-103 PHEX9_ADENT HEXON-ASSOCIATED PROTEIN TUPAIA ADENOVIRUS  61-109 PHEX_ADE02 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 2 341-386 433-467 583-624 PHEX_ADE05 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 5 330-379 PHEX_ADE40 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 40 303-352 408-449 553-587 PHEX_ADE41 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 41 306-355 555-589 PHEX_ADEB3 HEXON PROTEIN BOVINE ADENOVIRUS TYPE 3 301-346 385-419 544-578 705-739 PHRG_COWPX HOST RANGE PROTEIN COWPOX VIRUS 320-395 455-489 PI226_ASFB7 LATE PROTEIN 1226R AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 110-151 PIBMP_CAMV4 INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D4)  3-44 378-419 PIBMP_CAMVB INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BARI 1) 379-420 PIBMP_CAMVC INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841)  3-37 378-419 PIBMP_CAMVD INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H)  3-44 378-419 PIBMP_CAMVE INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC)  3-37 378-419 PIBMP_CAMVJ INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS  3-37 378-419 (STRAIN S-JAPAN) PIBMP_CAMVN INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153)  3-37 378-419 PIBMP_CAMVP INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN PV147)  3-37 378-419 PIBMP_CAMVS INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS  3-37 378-419 (STRAIN STRASBOURG) PIBMP_CERV INCLUSION BODY MATRIX PROTEIN CARNATION ETCHED RING VIRUS  3-37 PIBMP_FMVD INCLUSION BODY MATRIX PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS)  1-51 372-406 PIBMP_SOCMV INCLUSION BODY MATRIX PROTEIN  1-48 132-179 PIC18_HCMVA PROBABLE PROCESSING AND TRANSPORT HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 53-98 290-324 498-532 PROTEIN PIC18_HSV11 PROCESSING AND TRANSPORT PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 331-365 PIC18_HSV1A PROCESSING AND TRANSPORT PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/ 331-365 STRAIN ANGELOTTI) PIC18_HSV1F PROCESSING AND TRANSPORT PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F) 324-362 PIC18_HSVB2 PROBABLE PROCESSING AND TRANSPORT BOVINE HERPESVIRUS TYPE 2 (STRAIN BMV) 466-500 PROTEIN PIC18_HSVEB PROBABLE PROCESSING AND TRANSPORT HERPESVIRUS TYPE 1 (ISOLATE HVS25A) 341-375 PROTEIN PIC18_HSVSA PROBABLE PROCESSING AND TRANSPORT HERPESVIRUS SAIMIRI (STRAIN 11) 58-99 361-395 PROTEIN PIC18_MCMVS PROBABLE PROCESSING AND TRANSPORT MURINE CYTOMEGALOVIRUS (STRAIN SMITH)  60-112 290-340 647-691 PROTEIN PIC18_PRVIF PROBABLE PROCESSING AND TRANSPORT PSEUDORABIES VIRUS 299-333 303-337 PROTEIN (STRAIN INDIANA-FUNKHAUSER/BECKE PICP0_HSVBJ TRANS-ACTING TRANSCRIPTIONAL BOVINE HERPESVIRUS TYPE 1 (STRAIN JURA) 190-224 PROTEIN ICP0 PICP0_HSVBK TRANS-ACTING TRANSCRIPTIONAL BOVINE HERPESVIRUS TYPE 1 (STRAIN K22) 190-224 PROTEIN ICP0 PICP4_HSVMG TRANS-ACTING TRANSCRIPTIONAL MAREK'S DISEASE HERPESVIRUS (STRAIN GA) 1022- ACTIVATOR PR 1056 PICP4_VZVD TRANS-ACTING TRANSCRIPTIONAL VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 920-954 PROTEIN ICP4 PIE63_HCMVA TRANSCRIPTIONAL REGULATOR IE63 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 207-241 HOMOLOG PIE63_HSV11 TRANSCRIPTIONAL REGULATOR IE63 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 241-275 PIE63_HSVEB TRANSCRIPTIONAL REGULATOR IE63 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 282-316 HOMOLOG PIE63_VZVD TRANSCRIPTIONAL REGULATOR IE63 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 195-229 258-306 HOMOLOG PIE68_HSVE4 IMMEDIATE-EARLY PROTEIN IE68 EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942)  87-121 PIE68_HSVEB IMMEDIATE-EARLY PROTEIN IE68 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)  99-133 PIE68_HSVSA IMMEDIATE-EARLY PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 48-85 PIR05_HCMVA HYPOTHETICAL PROTEIN IRL5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)_(—) 13-47 PIR12_HCMVA HYPOTHETICAL PROTEIN IRL12 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  74-162 PKABL_FSVHY TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 280-314 TRANSFORMING PROT (STRAIN HARDY-ZUCKERMAN 2) PKABL_MLVAB TYROSINE-PROTEIN KINASE ABELSON MURINE LEUKEMIA VIRUS 217-251 TRANSFORMING PROT PKAKT_MLVAT AKT KINASE TRANSFORMING PROTEIN AKT8 MURINE LEUKEMIA VIRUS 172-227 263-304 PKFES_FSVGA TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 23-64 104-178 TRANSFORMING PROT (STRAIN GARDNER-ARNSTEIN) PKFGR_FSVGR TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 218-252 TRANSFORMING PROT (STRAIN GARDNER-RASHEED) PKFMS_FSVMD FMS TYROSINE KINASE TRANSFORMING FELINE SARCOMA VIRUS 313-362 638-679 812-849 PROTEIN (STRAIN MCDONOUGH) PKFPS_AVISP TYROSINE-PROTEIN KINASE AVIAN SARCOMA VIRUS (STRAIN PRCII) 65-99 TRANSFORMING PROT PKFPS_FUJSV TYROSINE-PROTEIN KINASE FUJINAMI SARCOMA VIRUS 65-99 152-251 348-398 TRANSFORMING PROT PKITH_AMEPV THYMIDINE KINASE AMSACTA MOOREI ENTOMOPOXVIRUS 47-81 PKITH_CAPVK THYMIDINE KINASE CAPRIPOXVIRUS (STRAIN KS-1 38-82 PKITH_EBV THYMIDINE KINASE EPSTEIN-BARR VIRUS (STRAIN B95-8) 228-262 431-472 PKITH_HSV11 THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)  90-124 PKITH_HSV1C THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN CL101)  90-124 PKITH_HSV1E THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN HFEM)  90-124 PKITH_HSV1K THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS)  90-124 PKITH_HSV1S THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN SC16)  90-124 PKITH_HSV23 THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 333)  91-125 PKITH_HSVBM THYMIDINE KINASE BOVINE HERPES VIRUS TYPE 3 (STRAIN WC11) 616-665 PKITH_HSVE4 THYMIDINE KINASE EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 19-53 178-219 PKITH_HSVEB THYMIDINE KINASE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 19-53 178-230 PKITH_HSVF THYMIDINE KINASE FELINE HERPESVIRUS (FELID HERPESVIRUS 1) 180-214 PKITH_HSVMR THYMIDINE KINASE MARMOSET HERPESVIRUS 52-86 PKITH_HSVSA THYMIDINE KINASE HERPESVIRUS SAIMIRI (STRAIN 11) 337-389 PKITH_PRVN3 THYMIDINE KINASE PSEUDORABIES VIRUS (STRAIN NIA-3) 161-202 PKMIL_AVIMH MIL SERINE/THREONINE-PROTEIN KINASE AVIAN RETROVIRUS MH2  69-103 TRANSF PKR15_HSVI1 GENE 15 PROTEIN KINASE ICTALURID HERPESVIRUS 1 190-224 PKR2_HSVI1 PROBABLE SERINE/THREONINE-PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 57-91 281-315 KINASE PKR74_HSVI1 GENE 74 PROTEIN KINASE ICTALURID HERPESVIRUS 1 487-528 597-631 PKRAF_MSV36 RAF SERINE/THREONINE-PROTEIN MURINE SARCOMA VIRUS 3611 11-45 KINASE TRANSF PKRB1_VACCC 30 KD PROTEIN KINASE HOMOLOG VACCINIA VIRUS (STRAIN COPENHAGEN) 127-168 PKRB1_VACCV 30 KD PROTEIN KINASE HOMOLOG VACCINIA VIRUS (STRAIN WR) 127-168 PKRB1_VARV 30 KD PROTEIN KINASE HOMOLOG VARIOLA VIRUS 123-171 PKRB2_VACCC POSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STRAIN COPENHAGEN) 147-181 PKRB2_VACCV POSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STRAIN WR) 147-181 PKRF1_VACCC POSSIBLE PROTEIN KINASE F10 VACCINIA VIRUS (STRAIN COPENHAGEN) 169-203 PKRF1_VACCP POSSIBLE PROTEIN KINASE F10 VACCINIA VIRUS (STRAIN L-1VP) 136-170 PKRF1_VARV POSSIBLE PROTEIN KINASE F10 VARIOLA VIRUS 169-203 PKROS_AVISU ROS TYROSINE KINASE TRANSFORMING AVIAN SARCOMA VIRUS (STRAIN UR2) 111-145 PROTEIN PKRYK_AVIR3 TYROSINE-PROTEIN KINASE AVIAN RETROVIRUS RPL30 15-66 TRANSFORMING PROT PKTHY_VACCV THYMIDYLATE KINASE VACCINIA VIRUS (STRAIN WR) 135-169 (STRAIN COPENHAGEN) PKYES_AVISY TYROSINE-PROTEIN KINASE AVIAN SARCOMA VIRUS (STRAIN Y73) 174-233 TRANSFORMING PROT PL100_ADE02 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 441-475 PL100_ADE05 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 223-264 PL100_ADE40 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 40 191-232 408-442 PL100_ADE41 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 41 199-233 PL52_ADE02 LATE L1 52 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 238-284 301-349 PL52_ADE05 LATE L1 52 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 238-284 301-349 PLMP2_EBV GENE TERMINAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 144-179 294-338 PMCEL_SFVKA MRNA CAPPING ENZYME SHOPE FIBROMA VIRUS (STRAIN KASZA)  54-152 622-656 PMCEL_VACCC MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN COPENHAGEN)  1-41 623-657 PMCEL_VACCV MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN WR)  1-41 623-657 PMCEL_VARV MRNA CAPPING ENZYME VARIOLA VIRUS  1-39 623-657 PMCES_VACCC MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN COPENHAGEN)  72-137 245-286 PMCES_VACCV MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN WR)  72-137 245-286 PMCES_VARV MRNA CAPPING ENZYME VARIOLA VIRUS  72-137 245-286 PMCE_ASFB7 MRNA CAPPING ENZYME AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 116-157 279-313 738-772 PMOVP_ORSV MOVEMENT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS 53-90 PMOVP_PPMVS MOVEMENT PROTEIN PEPPER MILD MOTTLE VIRUS (STRAIN SPAIN) 26-66 PMOVP_TMGMV MOVEMENT PROTEIN TOBACCO MILD GREEN MOSAIC VIRUS 29-66 (TMV STRAIN U2) PMOVP_TMVTO MOVEMENT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN TOMATO/L) 32-66 PMOVP_TOMVA MOVEMENT PROTEIN TOMATO MOSAIC VIRUS (STRAIN LIIA) 32-80 PMOVP_TOMVL MOVEMENT PROTEIN TOMATO MOSAIC VIRUS (STRAIN LII) 32-80 PMTC1_CHVN1 MODIFICATION METHYLASE CVIBI CHLORELLA VIRUS NC-1A 222-256 PMTC2_CHVP1 MODIFICATION METHYLASE CVIAII PARAMECIUM BURSARIA CHLORELLA VIRUS 1 116-164 PMYC_AVIM2 MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS CMII 229-266 375-419 PMYC_AVIMC MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS MC29 230-267 376-420 PMYC_AVIMD MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS HBI 230-267 376-420 PMYC_AVIME MYC TRANSFORMING PROTEIN AVIAN RETROVIRUS MH2E21 377-421 PMYC_AVIOK MYC TRANSFORMING PROTEIN AVIAN RETROVIRUS OK10 224-261 370-414 PMYC_FLV MYC TRANSFORMING PROTEIN FELINE LEUKEMIA VIRUS 393-437 PMYC_FLVTT MYC TRANSFORMING PROTEIN FELINE LEUKEMIA PROVIRUS FTT 393-437 PNCA2_CVMA5 NUCLEOCAPSID PROTEIN MURINE CORONAVIRUS MHV (STRAIN A59) 12-46 PNCAP_AINOV NUCLEOCAPSID PROTEIN AINO VIRUS 177-211 PNCAP_BEV NUCLEOCAPSID PROTEIN BERNE VIRUS 46-83 122-156 PNCAP_BRSVA NUCLEOCAPSID PROTEIN BOVINE RESPIRATOR SYNCYTIAL VIRUS  62-108 163-200 248-303 343-383 (STRAIN A51908) PNCAP_BUNGE NUCLEOCAPSID PROTEIN BUNYAVIRUS GERMISTON 176-228 PNCAP_BUNLC NUCLEOCAPSID PROTEIN BUNYAVIRUS LA CROSSE 176-229 PNCAP_BUNSH NUCLEOCAPSID PROTEIN BUNYAVIRUS SNOWSHOE HARE 176-229 PNCAP_BUNYW NUCLEOCAPSID PROTEIN BUNYAMWERA VIRUS 175-228 PNCAP_CCHFV NUCLEOCAPSID PROTEIN CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS 223-306 427-461 (ISOLATE C6803 PNCAP_CDVO NUCLEOCAPSID PROTEIN CANINE DISTEMPER VIRUS 137-174 179-217 354-402 (STRAIN ONDERSTEPOORT) PNCAP_CHAV NUCLEOCAPSID PROTEIN CHANDIPURA VIRUS (STRAIN 1653514) 40-84 321-369 PNCAP_CVBF NUCLEOCAPSID PROTEIN BOVINE CORONAVIRUS (STRAIN F15) 349-383 PNCAP_CVBM NUCLEOCAPSID PROTEIN BOVINE CORONAVIRUS (STRAIN MEBUS) 349-383 PNCAP_CVCAE NUCLEOCAPSID PROTEIN CANINE ENTERIC CORONAVIRUS (STRAIN K378) 165-227 PNCAP_CVHOC NUCLEOCAPSID PROTEIN HUMAN CORONAVIRUS (STRAIN OC43) 349-383 PNCAP_CVMJH NUCLEOCAPSID PROTEIN MURINE CORONAVIRUS MHV (STRAIN JHM) 12-46 PNCAP_CVPFS NUCLEOCAPSID PROTEIN PORCINE TRANSMISSIBLE GASTROENTERITIS 149-206 CORONAVIRUS (S PNCAP_CVPPU NUCLEOCAPSID PROTEIN PORCINE TRANSMISSIBLE GASTROENTERITIS 165-227 CORONAVIRUS (S PNCAP_CVPR8 NUCLEOCAPSID PROTEIN PORCINE RESPIRATORY CORONAVIRUS 149-228 (STRAIN 86/137004/BRIT PNCAP_CVPRM NUCLEOCAPSID PROTEIN PORCINE RESPIRATORY CORONAVIRUS 149-228 (STRAIN RM4) PNCAP_CVRSD NUCLEOCAPSID PROTEIN RAT CORONAVIRUS (STRAIN 681) 12-46 PNCAP_CVTKE NUCLEOCAPSID PROTEIN TURKEY ENTERIC CORONAVIRUS 349-383 PNCAP_DUGBV NUCLEOCAPSID PROTEIN DUGBE VIRUS 230-306 PNCAP_FIPV NUCLEOCAPSID PROTEIN FELINE INFECTIOUS PERITONITIS VIRUS 151-206 (STRAIN 79-1146) PNCAP_HANTV NUCLEOCAPSID PROTEIN HANTAAN VIRUS (STRAIN 76-118)  1-35 40-74 333-381 PNCAP_HAZVJ NUCLEOCAPSID PROTEIN HAZARA VIRUS (ISOLATE JC280) 233-297 PNCAP_HRSV1 NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS  62-145 163-200 248-303 343-380 (SUBGROUP B/STRAI PNCAP_HRSVA NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS  62-145 163-200 248-303 343-380 (STRAIN A2) PNCAP_IBVG NUCLEOCAPSID PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 186-227 (STRAIN GRAY) PNCAP_IBVK NUCLEOCAPSID PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 186-220 (STRAIN KB8523) PNCAP_JUNIN NUCLEOCAPSID PROTEIN JUNIN ARENAVIRUS  96-151 PNCAP_LASSG NUCLEOCAPSID PROTEIN LASSA VIRUS (STRAIN GA391)  65-113 126-174 PNCAP_LASSJ NUCLEOCAPSID PROTEIN LASSA VIRUS (STRAIN JOSIAH)  65-113 122-174 467-504 PNCAP_LDV NUCLEOCAPSID PROTEIN LACTATE DEHYDROGENASE-ELEVATING VIRUS(  3-40 PNCAP_LYCVA NUCLEOCAPSID PROTEIN LYMPHOCYTIC CHORIOMENINGITIS VIRUS  45-117 460-497 (STRAIN ARMSTRON PNCAP_LYCVW NUCLEOCAPSID PROTEIN LYMPHOCYTIC CHORIOMENINGITIS VIRUS 45-79  83-117 460-497 (STRAIN WE) PNCAP_MAGV NUCLEOCAPSID PROTEIN MAGUARI VIRUS 175-228 PNCAP_MEASE NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN EDMONSTON) 188-226 363-411 PNCAP_MEASH NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN HALLE) 188-226 363-411 PNCAP_MEASI NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN IP-3-CA) 188-226 363-411 PNCAP_MEASY NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN YAMAGATA-1) 188-226 363-411 PNCAP_MOPEI NUCLEOCAPSID PROTEIN MOPEIA VIRUS  65-106 471-505 PNCAP_MUMP1 NUCLEOCAPSID PROTEIN MUMPS VIRUS (STRAIN SBL-1) 214-255 500-534 PNCAP_MUMPM NUCLEOCAPSID PROTEIN MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 214-255 PNCAP_PHV NUCLEOCAPSID PROTEIN PROSPECT HILL VIRUS  1-35 40-74 337-392 PNCAP_P11HC NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 212-272 441-510 PNCAP_P11HW NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 212-272 441-510 (STRAIN WASHINGTON/1957) PNCAP_P12HT NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 214-266 344-378 (STRAIN TOSHIBA) PNCAP_P13B NUCLEOCAPSID PROTEIN BOVINE PARAINFLUENZA 3 VIRUS 200-403 446-490 PNCAP_P13H4 NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 3 VIRUS  87-135 208-266 344-403 440-491 (STRAIN NIH 47885) PNCAP_P14HA NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 4A VIRUS 58-94 191-267 (STRAIN TOSHIBA) PNCAP_P14HB NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 4B VIRUS 58-94 191-267 (STRAIN 68-333) PNCAP_PIARV NUCLEOCAPSID PROTEIN PICHINDE ARENAVIRUS  65-112 PNCAP_PIRYV NUCLEOCAPSID PROTEIN PIRY VIRUS  71-116 325-359 PNCAP_PUUMH NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN HALLNAS B1)  1-35 40-75 337-392 PNCAP_PUUMS NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN SOTKAMO)  1-35 40-75 337-385 PNCAP_PVM NUCLEOCAPSID PROTEIN PNEUMONIA VIRUS OF MICE  93-141 248-303 344-388 PNCAP_RABVA NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN AVO1) 133-167 PNCAP_SEND5 NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 212-272 345-404 PNCAP_SENDE NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN ENDERS) 212-272 345-404 PNCAP_SENDZ NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z) 212-272 345-408 PNCAP_SEOUS NUCLEOCAPSID PROTEIN SEOUL VIRUS (STRAIN SR-11)  1-35 40-74 333-381 PNCAP_SV41 NUCLEOCAPSID PROTEIN SIMIAN VIRUS 41 215-267 372-406 418-466 PNCAP_SYNV NUCLEOCAPSID PROTEIN SONCHUS YELLOW NET VIRUS 332-366 PNCAP_TACV NUCLEOCAPSID PROTEIN TACARIBE VIRUS 50-84 230-264 PNCAP_TOSV NUCLEOCAPSID PROTEIN TOSCANA VIRUS 215-249 PNCAP_TSWVB NUCLEOCAPSID PROTEIN TOMATO SPOTTED WILT VIRUS  79-120 (BRAZILIAN ISOLATE CPNH1/BR PNCAP_TSWVH NUCLEOCAPSID PROTEIN TOMATO SPOTTED WILT VIRUS  79-120 (HAWAIIAN ISOLATE) PNCAP_TSWVL NUCLEOCAPSID PROTEIN TOMATO SPOTTED WILT VIRUS (STRAIN L3)  79-120 PNCAP_UUK NUCLEOCAPSID PROTEIN UUKUNIEMI VIRUS  51-102 PNCAP_VHSV0 NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIA VIRUS 249-325 (STRAIN 07-71) PNCAP_VHSVM NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIA VIRUS 142-180 249-325 (STRAIN MAKAH) PNCAP_VSVIG NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS  42-108 (SEROTYPE INDIANA/STRAIN G PNCAP_VSVJO NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS  67-115 (SEROTYPE NEW JERSEY/STRA PNCAP_VSVSJ NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS  42-115 (STRAIN SAN JUAN) PNEF_HV2BE NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2  7-48 (ISOLATE BEN) PNEF_HV2D1 NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2  7-41 (ISOLATE D194) PNEF_HV2RO NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 112-160 (ISOLATE ROD) PNEF_HV2SB NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 109-150 (ISOLATE SBLISY) PNEF_HV2ST NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 108-149 (ISOLATE ST) PNEF_SIVAI NEGATIVE FACTOR SIMIAN IMMUNODEFICIENCY VIRUS  96-140 (ISOLATE AGM/CLONE GR1 PNEF_SIVS4 NEGATIVE FACTOR SIMIAN IMMUNODEFICIENCY VIRUS  9-43 233-267 (F236/SMH4 ISOLATE) PNRAM_IABDA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 47-81 BLACK DUCK/AUSTRALIA/702/78 PNRAM_IACAO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 33-74 CAMEL/MONGOLIA/82) PNRAM_IACHI NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-91 CHILE/1/83) PNRAM_IACKQ NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 349-383 CHICKEN/PENNSYLVANIA/1370/ PNRAM_IACKR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 349-383 CHICKEN/PENNSYLVANIA/8125/ PNRAM_IADGE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 14-48 DUCK/GERMANY/49) PNRAM_IAFPW NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 14-48 194-229 FOWL PLAGUE VIRUS/WEYBRID PNRAM_IAHCO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 10-47 193-227 EQUINE/COR/16/74 PNRAM_IAHK1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/  5-44 361-402 EQUINE/KENTUCKY/1/81) PNRAM_IAKIE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-91 KIEV/59/79) PNRAM_IALEN NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-91 LENINGRAD/54/1) PNRAM_IAME1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-88 MEMPHIS/1/71H-A/BELLAMY/42N PNRAM_IARUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-91 RUDDY TURNSTONE/NEW JERSE PNRAM_IASH2 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 10-44 SHEARWATER/AUSTRALIA/72) PNRAM_IATKR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/  7-41 TURKEY/OREGON/71) PNRAM_IATRA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-83 TERN/AUSTRALIA/G70C/75) PNRAM_IAUSS NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-91 USSR/90/77) PNRAM_IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-91 WHALE/MAINE/1/84) PNRAM_INBBE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-46 348-382 BEIJING/1/87) PNRAM_INBHK NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-46 349-383 HONG KONG/8/73) PNRAM_INBLE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-46 349-383 LEE/40) PNRAM_INBLN NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-39 348-382 LENINGRAD/179/86),STRAIN B/M PNRAM_INBMD NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-39 349-383 MARYLAND/59) PNRAM_INBMF NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-46 348-382 MEMPHIS/3/89) PNRAM_INBOR NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-46 349-383 OREGON/5/80) PNRAM_INBSI NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-39 349-383 SINGAPORE/222/79) PNRAM_INBUS NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-39 349-383 USSR/100/83) PNRAM_INBVI NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-39 348-382 VICTORIA/3/85 PNS2_SIDEV PROBABLE STRUCTURAL PROTEIN BOMBYX DENSONUCLEOSIS VIRUS 790-828 PRECURSOR PNSS_INSVN NON-STRUCTURAL PROTEIN IMPATIENS NECROTIC SPOT VIRUS  95-129 204-238 (STRAIN NL-07) PNSS_TSWVB NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS  3-37 (BRAZILIAN ISOLATE CPNH1/BR PNSS_TSWVL NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS  3-37 (STRAIN L3) PNTP1_AMEPV NUCLEOSIDE TRIPHOSPHATASE I AMSACTA MOOREI ENTOMOPOXVIRUS 28-69 110-144 PNTP1_CBEPV NUCLEOSIDE TRIPHOSPHATASE I CHORISTONEURA BIENNIS ENTOMOPOXVIRUS 122-169 415-449 514-555 PNTP1_VACCC NUCLEOSIDE TRIPHOSPHATASE I VACCINIA VIRUS (STRAIN COPENHAGEN) 56-90 248-289 549-599 PNTP1_VACCV NUCLEOSIDE TRIPHOSPHATASE I VACCINIA VIRUS (STRAIN WR) 56-90 248-289 549-599 PNTP1_VARV NUCLEOSIDE TRIPHOSPHATASE I VARIOLA VIRUS 154-195 455-505 PP100_HSV6U MAJOR ANTIGENIC STRUCTURAL PROTEIN HERPES SIMPLEX VIRUS (TYPE 6/ 189-223 689-735 STRAIN UGANDA-1102) PPAP1_VACCC POLY(A) POLYMERASE CATALYTIC VACCINIA VIRUS (STRAIN COPENHAGEN) 121-180 SUBUNIT PPAP1_VACCV POLY(A) POLYMERASE CATALYTIC VACCINIA VIRUS (STRAIN WR) 121-180 SUBUNIT PPAP1_VARV POLY(A) POLYMERASE CATALYTIC VARIOLA VIRUS 121-180 SUBUNIT PPAP2_CAPVK POLY(A) POLYMERASE REGULATORY CAPRIPOXVIRUS (STRAIN KS-1) 112-146 SUBUNIT PPAP2_FOWPV POLY(A) POLYMERASE REGULATORY FOWLPOX VIRUS  95-154 SUBUNIT PPAP2_VACCC POLY(A) POLYMERASE REGULATORY VACCINIA VIRUS (STRAIN COPENHAGEN) 203-249 SUBUNIT PPAP2_VACCV POLY(A) POLYMERASE REGULATORY VACCINIA VIRUS (STRAIN WR) 203-249 SUBUNIT PPAP2_VARV POLY(A) POLYMERASE REGULATORY VARIOLA VIRUS 203-249 SUBUNIT PPE12_NPVAC 12.1 KD PROTEIN IN PE 5′REGION AUTOGRAPHA CALIFORNICA NUCLEAR 15-56  60-105 POLYHEDROSIS VIRUS PPE12_NPVOP 11.5 KD PROTEIN IN P26 5′REGION ORGYIA PSEUDOTSUGATA MULTICAPSID 11-98 POLYHEDROSIS VIRUS PPE38_NPVAC MAJOR IMMEDIATE EARLY PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 19-77 197-249 POLYHEDROSIS VIRUS PPE38_NPVOP MAJOR IMMEDIATE EARLY PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 190-240 POLYHEDROSIS VIRUS PPE48_NPVAC 48.3 KD PROTEIN IN PE-P26 AUTOGRAPHA CALIFORNICA NUCLEAR  4-42 48-89  97-131 INTERGENIC REGION POLYHEDROSIS VIRUS PPE48_NPVOC 47.3 KD PROTEIN IN PE-P26 ORGYIA PSEUDOTSUGATA MULTICAPSID 47-82 165-199 INTERGENIC REGION POLYHEDROSIS VIRUS PPIV2_ADE07 MATURATION PROTEIN HUMAN ADENOVIRUS TYPE 7 414-448 PPIV6_ADE02 PROTEIN VI PRECURSOR HUMAN ADENOVIRUS TYPE 2 37-71 PPIV6_ADE05 PROTEIN VI PRECURSOR HUMAN ADENOVIRUS TYPE 5 37-71 PPOL1_BAYMG GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 329-363 743-777 957-991 1265- 2229- 2309- 2368- (GERMAN ISOLATE) 1299 2266 2352 2404 PPOL1_BAYMJ GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 329-363 671-705 743-777 957-994 1265- 2227- 2307- 2366 (JAPANESE STRAIN 11-1) 1299 2264 2350 PPOL1_GCMV RNA1 POLYPROTEIN HUNGARIAN GRAPEVINE CHROME MOSAIC 120-161 165-216 230-273 377-415 VIRUS PPOL1_GFLV RNA1 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 170-212 480-519 636-677 691-725 1157- 1378- 1906- 1196 1412 1943 PPOL1_TBRVS RNA1 POLYPROTEIN TOMATO BLACK RING VIRUS (STRAIN S) 223-270 929-977 PPOL1_TRSVR RNA1 POLYPROTEIN TOMATO RINGSPOT VIRUS 161-206 (ISOLATE RASPBERRY) PPOL2_BAYMG GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 240-281 669-732 739-773 787-828 (GERMAN ISOLATE) PPOL2_BAYMU GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 669-732 739-773 787-828 (JAPANESE STRAIN II-1) PPOL2_GFLV RNA2 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 365-406 542-602 PPOL2_TBRVS RNA2 POLYPROTEIN TOMATO BLACK RING VIRUS (STRAIN S)  4-38 PPOL2_TRSVR RNA2 POLYPROTEIN TOMATO RINGSPOT VIRUS 158-206 334-368 (ISOLATE RASPBERRY) PPOLG_BOVEV GENOME POLYPROTEIN BOVINE ENTEROVIRUS (STRAIN VG-5-27) 849-886 1008- 1382- 1459- 1576- 1064 1416 1507 1617 PPOLG_BVDVN GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 244-289 446-491 629-663 1033- 1303- 1392- 1869- 2226- (ISOLATE NADL) 1074 1344 1443 1910 2260 PPOLG_BVDVS GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 245-289 446-491 629-663 1033- 1303- 1392- 1779- 2136- (STRAIN SD-1) 1074 1344 1443 1820 2170 PPOLG_BYMV GENOME POLYPROTEIN BEAN YELLOW MOSAIC VIRUS  96-130 PPOLG_COXA2 GENOME POLYPROTEIN COXSACKIEVIRUS A21 (STRAIN COE)  9-43 562-596 664-698 1045- 1498- 1607- 1805- 1901- 1100 1546 1648 1839 1946 PPOLG_COXA9 GENOME POLYPROTEIN COXSACKIEVIRUS A9 (STRAIN GRIGGS) 15-49 1040- 1895- 1086 1940 PPOLG_COXB1 GENOME POLYPROTEIN COXSACKIEVIRUS B1 15-49 1021- 1876- 1067 1921 PPOLG_COXB3 GENOME POLYPROTEIN COXSACKIEVIRUS B3 15-49 1024- 1879- 1070 1924 PPOLG_COXB4 GENOME POLYPROTEIN COXSACKIEVIRUS B4 15-49 642-681 1022- 1877- 1068 1922 PPOLG_COXB5 GENOME POLYPROTEIN COXSACKIEVIRUS B5 15-49 1024- 1879- 1070 1924 PPOLG_CYVV GENOME POLYPROTEIN CLOVER YELLOW VEIN VIRUS 120-154 PPOLG_DEN18 GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 836-1)  74-108 PPOLG_DEN1A GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN AHF 82-80)  74-108 PPOLG_DEN1C GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN CV1636/77)  74-108 PPOLG_DEN1S GENOME POLYPROTEIN DENGUE VIRUS TYPE 1  74-108 832-873 960-994 1142- 1386- 1614- 2518- 2946- (STRAIN SINGAPORE S275/90) 1179 1420 1648 2554 3016 PPOLG_DEN1W GENOME POLYPROTEIN DENGUE VIRUS TYPE 1  74-108 833-874 961-995 1143- (STRAIN WESTERN PACIFIC) 1180 PPOLG_DEN21 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (ISOLATE MALAYSIA M1) 448-492 PPOLG_DEN22 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (ISOLATE MALAYSIA M2) 448-495 PPOLG_DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681)  74-108 728-777 961-995 1146- 1246- 1418- 1615- 2517- 1180 1280 1452 1649 2551 PPOLG_DEN27 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681-PDK53)  74-108 728-777 961-995 1146- 1246- 1418- 1615- 2485- 1180 1280 1452 1649 2551 PPOLG_DEN2D GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN D2-04) 728-777 PPOLG_DEN2H GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TH-36) 497-546 PPOLG_DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN JAMAICA)  74-108 728-777 961-995 1146- 1246- 1418- 1615- 2517- 1180 1280 1452 1649 2551 PPOLG_DEN2N GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN NEW GUINEA C) 213-247 398-432 PPOLG_DEN2P GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN PR159/S1)  74-108 728-777 832-875 961-995 1146- 1246- 1418- 1615- 1180 1280 1452 1649 PPOLG_DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TONGA 1974) 448-497 552-595 681-715 866-900  966- 1205- 1000 1239 PPOLG_DEN2U GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN PUO-218) 614-663 PPOLG_DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 830-872 959-993 1385- 2224- 2480- 2704- 2940- 2980- 1419 2258 2521 2738 2978 3014 PPOLG_DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4 957-993 1380- 2514- 2701- 2941- 2977- 1414 2555 2735 2975 3011 PPOLG_EC11G GENOME POLYPROTEIN ECHOVIRUS 11 (STRAIN GREGORY) 213-259 1079- 1113 PPOLG_EMCV GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 1074- 1472- 1522- 1665- 1789- 1115 1518 1570 1706 1823 PPOLG_EMCVB GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 145-179 1076- 1474- 1524- 1667- (STRAIN EMC-B NONDIABETO 1117 1520 1572 1708 PPOLG_EMCVD GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 145-179 1076- 1474- 1524- 1667- (STRAIN EMC-D-DIABETOGEN 1117 1520 1572 1708 PPOLG_ENMG3 GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS 145-179 (STRAIN 37A) PPOLG_ENMGO GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS  78-112 PPOLG_FMDV1 GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 221-255 294-328 578-612 1103- 1493- 2165- (STRAIN A10-61) 1153 1528 2200 PPOLG_FMDVA GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 220-254 293-327 577-611 1103- 1493- 2164- (STRAIN A12) 1164 1528 2199 PPOLG_FMDVO GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 221-255 1103- 1493- 2164- (STRAINS O1K AND O1BFS) 1153 1528 2199 PPOLG_FMDVS GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS  87-128 693-728 (STRAIN C1-SANTA PAU [C-S PPOLG_FMDVT GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 221-255 283-317 577-611 (STRAIN C1) PPOLG_HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1) 364-398 PPOLG_HCVA GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN ALFORT) 440-493 626-660 695-729 1033- 1190- 1307- 1779- 2136- 1070 1235 1343 1820 2170 2466- 2525- 2667- 3057- 3152- 3406- 2500 2559 2708 3098 3193 3440 PPOLG_HCVB GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN BRESCIA) 440-493 626-660 695-729 1033- 1173- 1779- 2136- 2388- 1070 1235 1820 2170 2436 PPOLG_HCVBK 2466- 2525- 2667- 3057- 3152- 3406- 3521- 2500 2559 2708 3098 3195 3440 3562 PPOLG_HCVE0 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE BK) 357-398 2328- 2365 PPOLG_HCVH GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE EC10) 65-99 PPOLG_HCVH4 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE H) 364-398 PPOLG_HCVH7 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCV-476) 364-398 PPOLG_HCVH8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCT27) 236-270 PPOLG_HCVHK GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCT18) 248-282 PPOLG_HCVJ2 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCV-KF) 357-398 PPOLG_HCVJ5 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J2) 357-398 PPOLG_HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J5) 364-398 PPOLG_HCVJ7 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J6) 364-401 1716- 2082- 1750 2116 PPOLG_HCVJ8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J7) 364-398 PPOLG_HCVJA GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J8) 364-398 1716- 2082- 2468- 2538- 1750 2116 2502 2572 PPOLG_HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE JAPANESE) 357-405 2331- 2365 PPOLG_HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-JT) 357-391 2331- 2365 PPOLG_HPAV2 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE TAIWAN) 357-398 2328- 2444- 2365 2503 PPOLG_HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 24A)  2-43 101-135 203-237 870-904 1021- 1117- 1055 1151 PPOLG_HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 43C)  2-43 101-135 203-237 870-904 1021- 1117- 1055 1151 PPOLG_HPAVC GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 18F)  2-43 101-135 203-237 870-904 1021- 1117- 1055 1151 PPOLG_HPAVG GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN CR326)  2-43 101-135 203-237 PPOLG_HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN GA76)  80-114 182-216 PPOLG_HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN HM-175)  2-43 101-135 203-237 870-904 1021- 1103- 1055 1151 PPOLG_HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN LA)  2-43 101-135 203-237 870-904 1021- 1103- 1055 1151 PPOLG_HPAVS GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN MBB)  2-43 101-135 203-237 870-904 1021- 1103- 1055 1158 PPOLG_HPAVT GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS  6-47 105-139 207-241 849-908 1025- 1115- 1158- (STRAIN AGM-27) 1059 1155 1198 PPOLG_HRV14 GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS  2-43 101-135 203-237 (STRAIN CY-145) PPOLG_HRV1A GENOME POLYPROTEIN HUMAN RHINOVIRUS 14 (HRV-14) 1020- 1393- 1479- 1877- 1054 1427 1513 1920 PPOLG_HRV1B GENOME POLYPROTEIN HUMAN RHINOVIRUS 1A (HRV-1A) 362-396 PPOLG_HRV2 GENOME POLYPROTEIN HUMAN RHINOVIRUS 1B (HRV-1B) 387-421 863-904 1133- 1168 PPOLG_HRV89 GENOME POLYPROTEIN HUMAN RHINOVIRUS 2 (HRV-2) 856-897 1126- 1552- 1169 1593 PPOLG_HUEV7 GENOME POLYPROTEIN HUMAN RHINOVIRUS 89 (HRV-89) 1566- 1607 PPOLG_IBDVO GENOME POLYPROTEIN HUMAN ENTEROVIRUS 70 359-397 876-917 1032- 1403- 1896- (STRAIN J670/71) 1088 1441 1934 PPOLG_JAEV1 STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 250-291 475-524 (STRAIN OH) PPOLG_JAEV5 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS  74-122 211-256 539-576  980- 1409- 2463- 2739- 2782- (STRAIN SA-14) 1014 1450 2497 2777 2823 3322- 3387- 3359 3428 PPOLG_JAEVJ GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS  74-122 211-256 539-576  980- 1409- 2463- 2739- 2782- (STRAIN SA(V)) 1014 1450 2497 2777 2823 3322- 3387- 3359 3428 PPOLG_JAEVN GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS  74-128 211-256 539-576  980- 1409- 2463- 2739- 2782- (STRAIN JAOARS982) 1014 1450 2497 2777 2823 3322- 3387- 3359 3428 PPOLG_KUNJM GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS  7-48 138-183 467-504 908-942 1337- (STRAIN NAKAYAMA) 1378 PPOLG_LANVT GENOME POLYPROTEIN KUNJIN VIRUS (STRAIN MRM61C)  74-108 207-251 851-885 2464- 2528- 2740- 3325- 3389- 2498 2579 2778 3359 3423 PPOLG_LANVY GENOME POLYPROTEIN LANGAT VIRUS (STRAIN TP21)  68-102 431-465 962-996 1431- 1932- 2536- 2967- 3003- 1472 1966 2591 3001 3037 3102- 3145 PPOLG_LIV GENOME POLYPROTEIN LANGAT VIRUS (STRAIN YELANTSEV)  68-102 431-465 PPOLG_LIVSB GENOME POLYPROTEIN LOUPING ILL VIRUS (LI)  68-123 231-272 431-465 PPOLG_MCFA GENOME POLYPROTEIN LOUPING ILL VIRUS (STRAIN SB 526) 151-185 PPOLG_MVEV GENOME POLYPROTEIN MOSQUITO CELL FUSING AGENT  80-114 908-942 2049- 2630- 3036- 3290- (CFA FLAVIVIRUS) 2087 2689 3095 3341 PPOLG_OMV GENOME POLYPROTEIN MURRAY VALLEY ENCEPHALITIS VIRUS  67-115 209-253 853-887  979- 1408- 1013 1449 PPOLG_PEMVC GENOME POLYPROTEIN ORNITHOGALUM MOSAIC VIRUS 418-515 946-984 1072- 1106 PPOLG_POL1M GENOME POLYPROTEIN PEPPER MOTTLE VIRUS (CALIFORNIA ISOLATE)  55-100 207-248 377-411 704-738 827-862 877-947 1021- 1167- 1055 1201 1488- 1787- 1948- 2202- 2258- 2805- 3003- 1529 1821 1982 2236 2310 2839 3037 PPOLG_POL1S GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY)  9-43 1046- 1414- 1500- 1806- 1902- 1101 1448 1548 1840 1947 PPOLG_POL2L GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN SABIN)  9-43 899-933 1047- 1415- 1501- 1610- 1808- 1904- 1102 1449 1549 1651 1842 1949 PPOLG_POL2W GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN LANSING)  9-43 897-831 1045- 1413- 1502- 1608- 1806- 1902- 1100 1447 1547 1649 1840 1947 PPOLG_POL32 GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN W-2)  9-43 897-831 1045- 1413- 1502- 1608- 1806- 1902- 1100 1447 1547 1649 1840 1947 PPOLG_POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAIN 23127)  9-43 896-930 1044- 1412- 1498- 1607- 1805- 1901- 1098 1446 1546 1648 1839 1946 PPOLG_PPVD GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAINS P3/LEON/  9-43 896-930 1044- 1412- 1498- 1607- 1805- 1901- 37 AND P3/LEON 12A[1]B) 1099 1446 1546 1648 1839 1946 PPOLG_PPVEA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN D) 164-208 441-503 728-769 815-867 921-955 1741- 1782 PPOLG_PPVNA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN EL AMAR) 116-157 784-818 1146- 1197 PPOLG_PPVRA GENOME POLYPROTEIN PLUM POX POTYVIRUS (ISOLATE NAT) 164-208 403-437 440-502 727-768 814-873 920-954 1740- 1781 PPOLG_PRSVH GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN RANKOVIC) 164-208 403-437 440-502 727-768 814-866 920-954 1740- 1781 PPOLG_PRSVP GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS  68-102 434-468 (STRAIN P/MUTANT HA) PPOLG_PRSVW GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 325-359 (STRAIN P/MUTANT HA 5-1) PPOLG_PSBMV GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 325-359 (STRAIN W) PPOLG_PVYC GENOME POLYPROTEIN PEA SEED-BORNE MOSAIC (STRAIN DPD1) 253-315 355-389 529-589 935-976  984- 1080- 1588- 1808- 1018 1177 1627 1860 1971- 2379- 2712- 2870- 2015 2413 2746 2907 PPOLG_PVYHU GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN C) 131-196 701-735 802-856 PPOLG_PVYN GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN HUNGARIAN) 144-181 701-735 802-863 901-949 1401- 1492- 1728- 1777- 1441 1526 1772 1818 2272- 2306 PPOLG_PVYO GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN N) 140-196 211-245 701-735 802-863 1401- 1492- 1728- 1777- 1441 1526 1772 1818 1929- 1970 PPOLG_PWVSE GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN O) 140-196 211-245 701-735 802-856 PPOLG_PWVTB GENOME POLYPROTEIN PASSIONFRUIT WOODINESS VIRUS 203-237 (STRAIN SEVERE) PPOLG_PYFV1 GENOME POLYPROTEIN PASSIONFRUIT WOODINESS VIRUS 203-237 (STRAIN TIP BRIGHT) PPOLG_STEVM GENOME POLYPROTEIN PARSNIP YELLOW FLECK VIRUS (ISOLATE P-121) 194-228 1111- 1379- 1858- 1950- 2703- 1172 1413 1899 1991 2737 PPOLG_SVDVH GENOME POLYPROTEIN ST. LOUIS ENCEPHALITIS VIRUS (STRAIN MS1-7) 106-143 673-707 739-773  975- 1404- 1009 1438 PPOLG_SVDVU GENOME POLYPROTEIN SWINE VESICULAR DISEASE VIRUS 15-49 1024- 1779- 1890- (STRAIN H/3 ′76) 1070 1813 1924 PPOLG_TBEVS GENOME POLYPROTEIN SWINE VESICULAR DISEASE VIRUS 15-49 1024- 1890- (STRAIN UKG/27/72) 1070 1924 PPOLG_TBEVW GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS  68-140 231-272 431-465 1158- 1431- 1929- 2182- 2535- (STRAIN SOFJIN) 1192 1472 1966 2216 2590 2965- 3051- 3100- 2999 3092 3143 PPOLG_TEV GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS  68-140 231-272 431-465 1158- 1431- 1932- 2536- 2967- (WESTERN SUBTYPE) 1192 1492 1966 2591 3001 3003- 3053- 3102- 3037 3094 3145 PPOLG_TMEVB THEILER'S MURINE ENCEPHALOMYELITIS TOBACCO ETCH VIRUS  73-124 166-222 540-584 720-782 828-925 1148- 1416- 1494- VIRUS (S 1192 1460 1535 1668- 1747- 1792- 2395- 2787- 1702 1781 1826 2434 2821 PPOLG_TMEVD GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS 1306- 1483- 1601- VIRUS (STRAIN BEAN 1340 1518 1635 PPOLG_TMEVG GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS 1304- 1481- 1599- VIRUS (STRAIN DA) 1338 1516 1663 PPOLG_TUMV GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS 1306- 1483- 1601- VIRUS (STRAIN GDVII) 1340 1518 1635 PPOLG_TVMV GENOME POLYPROTEIN TURNIP MOSAIC VIRUS 216-259 314-362 494-528 768-839 1443- 1477 PPOLG_WMV2 GENOME POLYPROTEIN TOBACCO VEIN MOTTLING VIRUS 34-68 408-449 667-704 761-813 851-885  969- 1031- 1643- 1017 1072 1677 1686- 2316- 2701- 2814- 1725 2374 2749 2848 PPOLG_WNV GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II  68-105 202-236 PPOLG_YEFV1 GENOME POLYPROTEIN WEST NILE VIRUS  74-108 207-251 847-881  973- 1413- 2461- 2525- 2737- 1007 1447 2495 2576 2775 3320- 3385- 3357 3426 PPOLG_YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN 17D) 418-452 525-563 728-768 1388- 2231- 2477- 2958- 3097- 1444 2276 2565 2996 3143 PPOLG_YEFV8 GENOME POLYPROTEIN YELLOW FEVER VIRUS 418-452 525-563 728-768 1388- 2231- 2477- 2958- 3097- (STRAIN PASTEUR 17D-204) 1444 2276 2565 2996 3143 PPOLH_POL1M GENOME POLYPROTEIN YELLOW FEVER VIRUS  75-116 418-452 525-563 728-768 (STRAIN 1899/81) PPOLN_EEVVT GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY)  9-43 1047- 1415- 1501- 1610- 1808- 1904- 1102 1449 1549 1651 1842 1949 PPOLN_FCVC6 NONSTRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 345-382 898-932 1945- (STRAIN TRINIDAD 1979 PPOLN_FCVF9 NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS (STRAIN CFI/68 FIV) 510-544 PPOLN_HEVBU NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS (STRAIN F9)  4-45 369-410  986- 1023- 1020 1061 PPOLN_HEVME NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN BURMA) 338-379 1139- 1177 PPOLN_HEVMY NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN MEXICO) 338-379 PPOLN_HEVPA NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN MYANMAR) 338-379 1139- 1184 PPOLN_MIDDV NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN PAKISTAN) 337-378 1138- 1176 PPOLN_ONNVG NONSTRUCTURAL POLYPROTEIN MIDDELBURG VIRUS 922-977 PPOLN_RHDV NONSTRUCTURAL POLYPROTEIN O'NYONG-NYONG VIRUS (STRAIN GULU) 899-933 1942- 2444- 1986 2502 PPOLN_RRVN NON-STRUCTURAL POLYPROTEIN RABBIT HEMORRHAGIC DISEASE VIRUS 188-234 306-347 409-457 1657- 1716 PPOLN_RRVT NONSTRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092) 895-929 1928- 2414- 1962 2467 PPOLN_RUBVT NONSTRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48) 597-631 1083- 1136 PPOLN_SFV NONSTRUCTURAL POLYPROTEIN RUBELLA VIRUS (STRAIN THERIEN) 1506- 1551- 1730- 1862- 1540 1585 1767 1896 PPOLN_SINDO NONSTRUCTURAL POLYPROTEIN SEMLIKI FOREST VIRUS 1094- 2358- 1128 2392 PPOLN_SINDV NONSTRUCTURAL POLYPROTEIN SINDBIS VIRUS 919-971 1491- 1961- 2444- (SUBTYPE OCKELBO/STRAIN EDSBYN 82-5) 1525 1996 2478 PPOLR_EMPV NONSTRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAIN HRSP) 1491- 1959- 2442- 1525 1994 2476 PPOLS_EEEV RNA REPLICASE POLYPROTEIN EGGPLANT MOSAIC VIRUS 899-933 1127- 1161 PPOLS_EEEV3 STRUCTURAL POLYPROTEIN EASTERN EQUINE ENCEPHALITIS VIRUS 372-406 914-951 PPOLS_EEVV8 STRUCTURAL POLYPROTEIN EASTERN EQUINE ENCEPHALITIS VIRUS 373-407 915-952 (STRAIN VA33[TEN BRO PPOLS_EEVVT STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 1216- (STRAIN TC-83) 1250 PPOLS_IBDV5 STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 1216- (STRAIN TRINIDAD 1250 PPOLS_IBDVA STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 231-286 470-523 (STRAIN 52/70) PPOLS_IBDVC STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 231-286 470-523 (STRAIN AUSTRALI PPOLS_IBDVE STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 231-286 470-523 (STRAIN CU-1) PPOLS_IBDVP NONSTRUCTURAL PROTEIN VP4 AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 231-286 304-340 (STRAIN E) PPOLS_IBDVS STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 115-149 212-267 451-504 (STRAIN PBG-98) PPOLS_IPNVJ STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 249-283 470-523 (STRAIN STC) PPOLS_IPNVN STRUCTURAL POLYPROTEIN INFECTIOUS PANCREATIC NECROSIS VIRUS  69-103 723-785 (SEROTYPE JASPER) PPOLS_ONNVG STRUCTURAL POLYPROTEIN INFECTIOUS PANCREATIC NECROSIS VIRUS 716-786 (STRAIN N1) PPOLS_RRV2 STRUCTURAL POLYPROTEIN O'NYONG-NYONG VIRUS (STRAIN GULU) 1204- 1238 PPOLS_RRVN STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN 213970) 35-69 PPOLS_RRVT STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092) 369-403 939-973 PPOLS_RUBVH STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48) 939-973 PPOLS_RUBVR STRUCTURAL POLYPROTEIN RUBELLA VIRUS (VACCINE STRAIN HPV77)  999- 1036 PPOLS_RUBVT STRUCTURAL POLYPROTEIN RUBELLA VIRUS (VACCINE STRAIN RA27/3)  999- 1036 PPOLS_SINDO STRUCTURAL POLYPROTEIN RUBELLA VIRUS (STRAIN THERIEN)  999- 1036 PPOLS_SINDV STRUCTURAL POLYPROTEIN SINDBIS VIRUS 362-396 (SUBTYPE OCKELBO/STRAIN EDSBYN 82-5) PPOLS_SINDW STRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAINS HRSP AND HRLP) 362-396 PPOLS_WEEV STRUCTURAL POLYPROTEIN SINDBIS VIRUS 34-68 (WILD TYPE SB DERIVED FROM STRAIN AR339) PPOL_BAEVM STRUCTURAL POLYPROTEIN WESTERN EQUINE ENCEPHALITIS VIRUS 913-947 PPOL_BLVAU POL POLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 42-80 676-743 794-832 1001- 1042 PPOL_BLVJ POL POLYPROTEIN BOVINE LEUKEMIA VIRUS 625-673 (AUSTRALIAN ISOLATE) PPOL_CAEVC POL POLYPROTEIN BOVINE LEUKEMIA VIRUS 625-673 (JAPANESE ISOLATE BLV-1) PPOL_CAMVD POL POLYPROTEIN CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 879-934 (STRAIN CORK) PPOL_COYMV ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 177-211 PPOL_EIAV9 PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE VIRUS  87-121 333-367 447-498 838-876 896-930 1310- 1351 PPOL_EIAVC POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 513-566 1022- (CLONE 1369) 1056 PPOL_EIAVY POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 513-566 1022- (CLONE CL22) 1056 PPOL_FENV1 POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 512-565 1021- (ISOLATE WYOMING) 1055 PPOL_FIVPE POL POLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1 533-600 623-659 858-899 PPOL_FIVSD POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 429-473 606-663 (ISOLATE PETALUMA) PPOL_FIVT2 POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 428-473 606-642 (ISOLATE SAN DIEGO) PPOL_FMVD POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 428-472 595-662 (ISOLATE TM2) PPOL_FOAMV ENZYMATIC POLYPROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 403-437 PPOL_GALV POL POLYPROTEIN HUMAN SPUMARETROVIRUS (FOAMY VIRUS) 140-174 217-256 285-326 PPOL_HTL1A POL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 528-562 673-740 PPOL_HTL1C POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 670-711 (STRAIN ATK) PPOL_HV1A2 POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 670-711 (CARIBBEAN ISOLATE) PPOL_HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 501-537 606-664 (ARV2/SF2 ISOLATE PPOL_HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 513-549 639-676 (BH10 ISOLATE) PPOL_HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 513-549 618-676 (BH5 ISOLATE) PPOL_HV1EL POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 513-549 618-676 (BRU ISOLATE) PPOL_HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 626-663 (ELI ISOLATE) PPOL_HV1JR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 501-537 606-664 (HXB2 ISOLATE) PPOL_HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-541 610-668 (JRCSF ISOLATE) PPOL_HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 476-536 601-663 (MAL ISOLATE) PPOL_HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 504-540 609-667 (MN ISOLATE) PPOL_HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 501-537 627-664 (NEW YORK-5 ISOL PPOL_HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 626-663 (NDK ISOLATE) PPOL_HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 501-537 606-664 (OYI ISOLATE) PPOL_HV1RH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 513-549 693-676 (PV22 ISOLATE) PPOL_HV1U4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 605-663 (RF/HAT ISOLATE) PPOL_HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 601-663 (STRAIN UGANDAN PPOL_HV2BE POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 626-663 (Z2/CDC-Z34 ISOLA PPOL_HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 49-83 484-582 653-687 817-851 (ISOLATE BEN) PPOL_HV2D1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 356-390 464-562 632-666 (ISOLATE CAM2) PPOL_HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 502-600 671-705 (ISOLATE D194) PPOL_HV2G1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 376-410 484-526 529-577 653-687 (ISOLATE D205,7) PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 464-562 633-667 (ISOLATE GHANA-1) PPOL_HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 44-78 356-390 464-529 633-667 (ISOLATE NIH-Z) PPOL_HV2SB POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 357-391 465-563 634-668 (ISOLATE ROD) PPOL_HV2ST POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 46-80 473-562 633-667 (ISOLATE SBLISY) PPOL_IPHA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 484-518 522-577 653-687 (ISOLATE ST) PPOL_JSRV PUTATIVE POL POLYPROTEIN HAMSTER INTRACISTERNAL A-PARTICLE 462-503 PPOL_MLVAK POL POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 190-231 PPOL_MLVAV POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS 325-392 PPOL_MLVF5 POL POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 677-744 PPOL_MLVFF POL POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS 682-749 (ISOLATE 57) PPOL_MLVFP POL POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS 682-749 (ISOLATE FB29) PPOL_MLVMO POL POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS 682-749 (ISOLATE PVC-211) PPOL_MLVRD POL POLYPROTEIN MOLONEY MURINE LEUKEMIA VIRUS 677-744 PPOL_MLVRK POL POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 677-744 PPOL_MPMV POL POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS  62-129 (STRAIN KAPLAN) PPOL_OMVVS POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 470-504 578-613 PPOL_RSVP POL POLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV) 470-505 855-910 PPOL_RTBV POL POLYPROTEIN ROUS SARCOMA VIRUS (STRAIN PRAGUE C) 646-684 PPOL_RTBVP POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS  7-44 59-96 101-135 176-236 325-362 433-474 1005- 1405- 1039 1439 PPOL_SFV1 POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS  7-44 59-96 101-135 176-236 325-362 433-474 1005- 1405- (ISOLATE PHILIPPINES) 1039 1439 PPOL_SFV3L POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 349-383 427-464 494-535 PPOL_SIVA1 POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/STRAIN LK3) 124-165 429-467 496-530 PPOL_SIVA2 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 351-385 637-678 737-771 938-979 (AGM155 ISOLATE) PPOL_SIVAG POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 45-86 (AGM266 ISOLATE) PPOL_SIVAI POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 477-516 642-683 742-783 (AGM3 ISOLATE) PPOL_SIVAT POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 175-209 476-515 641-700 942-983 1020- (ISOLATE AGM/CLONE GR1 1054 PPOL_SIVCZ POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 657-698 757-798 (TYO-1 ISOLATE) PPOL_SIVGB POL POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 527-561 626-688 (S1V(CPZ)) PPOL_SIVM1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS  9-57 446-483 629-673 793-827 912-946 (ISOLATE GB1) PPOL_SIVMK POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 485-519 654-688 (MM142-83 ISOLATE) PPOL_SIVS4 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 485-519 654-688 (K6W ISOLATE) PPOL_SIVSP POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 448-482 617-651 (F236/SMH4 ISOLATE) PPOL_SOCMV POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 451-485 620-654 (PBJ/BC13 ISOLATE) PPOL_SRV1 ENZYMATIC POLYPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 247-295 372-416 PPOL_VIL V POL POLYPROTEIN SIMIAN RETROVIRUS SRV-1 470-504 578-613 PPOL_VIL V1 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514) 489-524 874-929 PPOL_VIL V2 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/ 489-524 874-929 CLONE LV1-1KS1) PPP15_HCMVA POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/ 489-524 874-929 CLONE LV1-1KS2) PPR73_MMTVB LARGE STRUCTURAL PHOSPHOPROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 116-150 187-221 PP150 PPR73_MMTVC PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 152-200 PPR73_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN C3H) 20-79 PPR7L_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 61-95 142-201 PPR7R_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 145-204 270-311 PPYHD_CPVBM PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 141-200 266-307 PPYHD_NPVAC POLYHEDRIN PRECURSOR BOMBYX MORI CYTOPLASMIC POLYHEDROSIS 13-85 VIRUS PPYHD_NPVAS POLYHEDRIN AUTOGRAPHA CALIFORNICA NUCLEAR 13-47 POLYHEDROSIS VIRUS PPYHD_NPVBM POLYHEDRIN AGROTIS SEGETUM NUCLEAR POLYHEDROSIS 14-48 VIRUS PPYHD_NPVBS POLYHEDRIN BOMBYX MORI NUCLEAR POLYHEDROSIS VIRUS 12-54 PPYHD_NPVLD POLYHEDRIN BUZURA SUPPRESSARIA NUCLEAR 14-48 POLYHEDROSIS VIRUS PPYHD_NPVMB POLYHEDRIN LYMANTRIA DISPAR MULTICAPSID NUCLEAR 14-48 POLYHEDROSIS VIRUS PPYHD_NPVOP POLYHEDRIN MAMESTRA BRASSICAE NUCLEAR 14-48 POLYHEDROSIS VIRUS PPYHD_NPVOS POLYHEDRIN ORGYIA PSEUDOTSUGATA MULTICAPSID 13-47 POLYHEDROSIS VIRUS PPYHD_NPVPF POLYHEDRIN ORGYIA PSEUDOTSUGATA SINGLE CAPSID 14-48 NUCLEAR POLYHED PPYHD_NPVSE POLYHEDRIN PANOLIS FLAMMEA MULTIPLE NUCLEOCAPSID 14-48 POLYHEDROSIS PPYHD_NPVSF POLYHEDRIN SPODOPTERA EXIGUA NUCLEAR POLYHEDROSIS 14-48 VIRUS (STRAIN PPYHD_NPVSL POLYHEDRIN SPODOPTERA FRUGIPERDA NUCLEAR 14-48 POLYHEDROSIS VIRUS PRASK_MSVKI POLYHEDRIN SPODOPTERA LITTORALIS NUCLEAR 17-51 POLYHEDROSIS VIRUS PREV_BIV27 TRANSFORMING PROTEIN 21 KIRSTEN MURINE SARCOMA VIRUS 142-176 PREV_EIAV9 REV PROTEIN BOVINE IMMUNODEFICIENCY VIRUS  77-115 (ISOLATE 127) PREV_EIAVC REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 51-89 (CLONE 1369) PREV_EIAVY REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 51-89 (CLONE CL22) PREV_HV112 REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS  81-119 (ISOLATE WYOMING) PREV_HV1A2 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (CLONE 12) PREV_HV1B1 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 32-69 (ARV2/SF2 ISOLATE PREV_HV1B8 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (BH10 ISOLATE) PREV_HV1BN REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 25-59 (BH8 ISOLATE) PREV_HV1BR REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 22-59 (BRAIN ISOLATE) PREV_HV1EL REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (BRU ISOLATE) PREV_HV1H2 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 32-66 (ELI ISOLATE) PREV_HV1J3 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (HXB2 ISOLATE) PREV_HV1JR REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 29-63 (JH3 ISOLATE) PREV_HV1MA REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 31-66 (JRCSF ISOLATE) PREV_HV1MN REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 31-66 (MAL ISOLATE) PREV_HV1OY REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 31-66 (MN ISOLATE) PREV_HV1PV REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 32-69 (OYI ISOLATE) PREV_HV1S3 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (PV22 ISOLATE) AN PREV_HV1SC REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (SF33 ISOLATE) PREV_SIVA1 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 32-69 (SC ISOLATE) PREV_SIVAG REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 26-77 (AGM155 ISOLATE) PREV_SIVAI REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 26-77 (AGM3 ISOLATE) PREV_SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 29-77 (ISOLATE AGM/CLONE GR1 PREV_SIVCZ REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 28-75 (TYO-1 ISOLATE) PREV_VILV REV PROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 33-67 PRIR1_ASFM2 REV PROTEIN VISNA LENTIVIRUS (STRAIN 1514) 21-62 PRIR1_EBV RIBONUCLEOSIDE-DIPHOSPHATE AFRICAN SWINE FEVER VIRUS  7-41  88-133 635-683 REDUCTASE LAR (ISOLATE MALAWI LIL 20/1) PRIR1_HCMVA RIBONUCLEOSIDE-DIPHOSPHATE EPSTEIN-BARR VIRUS (STRAIN B95-8) 213-247 689-723 REDUCTASE LAR PRIR1_HSVEB RIBONUCLEOSIDE-DIPHOSPHATE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 632-668 REDUCTASE LAR PRIR1_HSVSA RIBONUCLEOSIDE-DIPHOSPHATE EQUINE HERPESVIRUS TYPE 1  76-110 REDUCTASE LAR (STRAIN AB4P) PRIR1_VACCC RIBONUCLEOSIDE-DIPHOSPHATE HERPESVIRUS SAIMIRI (STRAIN 11) 324-365 REDUCTASE LAR PRIR1_VACCV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN COPENHAGEN) 367-402 REDUCTASE LAR PRIR1_VARV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN WR) 367-402 REDUCTASE LAR PRIR1_VZVD RIBONUCLEOSIDE-DIPHOSPHATE VARIOLA VIRUS 367-402 REDUCTASE LAR PRIR2_EBV RIBONUCLEOSIDE-DIPHOSPHATE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 223-257 REDUCTASE LAR PRIR2_HSVB3 RIBONUCLEOSIDE-DIPHOSPHATE EPSTEIN-BARR VIRUS (STRAIN B95-8)  89-137 REDUCTASE SMA PRIR2_HSVEB RIBONUCLEOSIDE-DIPHOSPHATE BOVINE HERPESVIRUS TYPE 1 (STRAIN 34) 101-135 REDUCTASE SMA PRIR2_HSVSA RIBONUCLEOSIDE-DIPHOSPHATE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 106-140 REDUCTASE SMA PRIR2_SFVKA RIBONUCLEOSIDE-DIPHOSPHATE HERPESVIRUS SAIMIRI (STRAIN 11) 125-159 REDUCTASE SMA PRIR2_VACCC RIBONUCLEOSIDE-DIPHOSPHATE SHOPE FIBROMA VIRUS (STRAIN KASZA)  98-132 REDUCTASE SMA PRIR2_VACCP RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN COPENHAGEN)  98-132 REDUCTASE SMA PRIR2_VACCV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN L-1VP)  98-132 REDUCTASE SMA PRIR2_VARV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN WR)  98-132 REDUCTASE SMA PRL1_HSV2H RIBONUCLEOSIDE-DIPHOSPHATE VARIOLA VIRUS  98-132 REDUCTASE SMA PRP94_VACCV NEUROVIRULENCE FACTOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 171-212 PRP94_VARV RNA-POLYMERASE-ASSOCIATED VACCINIA VIRUS (STRAIN WR), AND 116-150 465-540 757-791 TRANSCRIPTION S (STRAIN COPENHAGEN PRPO1_VACCC RNA-POLYMERASE-ASSOCIATED VARIOLA VIRUS 41-75 116-150 465-540 757-791 TRANSCRIPTION S PRPO1_VACCV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN) 243-291 622-656 754-791 954-988 1006- 147 KD POLYPE 1057 PRPO1_VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR) 243-291 622-656 754-791 954-988 1024- 147 KD POLYPE 1058 PRPO2_CAPVK DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 243-291 622-656 754-791 954-988 1006- 147 KD POLYPE 1057 PRPO2_COWPX DNA-DIRECTED RNA POLYMERASE CAPRIPOXVIRUS (STRAIN KS-1) 19-60 114-155 589-630 132 KD POLYPE PRPO2_VACCV DNA-DIRECTED RNA POLYMERASE COWPOX VIRUS 211-245 359-400 833-874 132 KD POLYPE PRPO2_VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR), 211-245 359-400 833-874 132 KD POLYPE AND (STRAIN COPENHAGEN) PRPO4_VACCC DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 211-245 359-400 833-874 132 KD POLYPE PRPO4_VACCV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN)  62-116 35 KD POLYPEP PRPO4_VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR)  62-116 35 KD POLYPEP PRPO5_VACCC DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS  62-116 35 KD POLYPEP PRPO5_VACCV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN)  1-71 30 KD POLYPEP PRPO5_VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR)  1-71 30 KD POLYPEP PRPO6_VACCV DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS  1-71 30 KD POLYPEP PRPO6_VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR), 25-59 22 KD POLYPEP AND (STRAIN COPENHAGEN) PRPO7_VACCV DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 25-59 22 KD POLYPEP PRPO7_VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR), 43-93 19 KD POLYPEP AND (STRAIN COPENHAGEN) PRPOA_LELV DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 43-93 19 KD POLYPEP PRPOL_EAV RNA-DIRECTED RNA POLYMERASE LELYSTAD VIRUS 1533- 1721- 1958- 2109- 1567 1758 1992 2157 PRRP1_IAANN RNA-DIRECTED RNA POLYMERASE EQUINE ARTERITIS VIRUS 1083- 1477- 1633- 1117 1518 1673 PRRP1_IABEI RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/ANN ARBOR/6/60) PRRP1_IADUN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 350-391 SUBUNIT P1 (STRAIN A/BEIJING/11/56) PRRP1_IAGU2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/DUNEDIN/4/73) PRRP1_IAHLO RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/GULL/MARYLAND/704/77) PRRP1_IAHTE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/EQUINE/LONDON/1416/73) PRRP1_IAKIE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/EQUINE/TENNESSEE/5/86) PRRP1_IAKOR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/KIEV/59/79) PRRP1_IALE1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/KOREA/426/68) PRRP1_IALE2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/LENINGRAD/134/57) PRRP1_IALE3 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/LENINGRAD/134/17/57) PRRP1_IAMAN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/LENINGRAD/134/47/57) PRRP1_IAME8 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/MALLARD/NEW YORK/6750/78) PRRP1_IANT6 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/MEMPHIS/8/88) PRRP1_IAPUE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/NT/60/68) PRRP1_IASIN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/PUERTO RICO/8/34) PRRP1_IATKM RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/SINGAPORE/1/57) PRRP1_IAVI7 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/TURKEY/MINNESOTA/833/80 PRRP1_IAWIL RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/VICTORIA/3/75) PRRP1_IAWIS RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/WILSON-SMITH/33) PRRP1_IAZH3 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/WISCONSIN/3 523/88) PRRP1_IAZON RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 187-242 279-313 SUBUNIT P1 (STRAIN A/SWINE/HONG KONG/126/82) PRRP1_IAZTF RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/SWINE/ONTARIO/2/81) PRRP1_INBAC RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/SWINE/TENNESSEE/26/77) PRRP1_INBAD RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 208-249 SUBUNIT P1 (STRAIN B/ANN ARBOR/1/66) PRRP1_INBLE RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 208-249 SUBUNIT P1 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE] PRRP1_INCJJ RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 208-249 SUBUNIT P1 (STRAIN B/LEE/40) PRRP2_IAANN RNA-DIRECTED RNA POLYMERASE INFLUENZA C VIRUS 305-384 648-686 707-752 SUBUNIT P1 (STRAIN C/JJ/50) PRRP2_IADH2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/ANN ARBOR/6/60) PRRP2_IAFPR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/DUCK/HOKKAIDO/8/80) PRRP2_IAGU2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PRRP2_IAHLO RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/GULL/MARYLAND/704/77) PRRP2_IAHTE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/EQUINE/LONDON/14 16/73) PRRP2_IAKOR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/EQUINE/TENNESSEE/5/86) PRRP2_IALE1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/KOREA/426/68) PRRP2_IALE2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/LENINGRAD/134/57) PRRP2_IAMAN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/LENINGRAD/134/17/57) PRRP2_IANT6 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/MALLARD/NEW YORK/6750/78) PRRP2_IAPI0 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/NT/60/68) PRRP2_IAPUE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/PINTAIL/ALBERTA/1 19/79) PRRP2_IARUD RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/PUERTO RICO/8/34) PRRP2_IASIN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/RUDDY TURNSTONE/NEW JERS PRRP2_IATKM RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SINGAPORE/1/57) PRRP2_IAVI7 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/TURKEY/MINNESOTA/833/80) PRRP2_IAWIL RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/VICTORIA/3/75) PRRP2_IAZH2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/WILSON-SMITH/33) PRRP2_IAZH3 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SWINE/HONG KONG/81/78 PRRP2_IAZI1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SWINE/HONG KONG/126/82) PRRP2_IAZTF RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SWINE/IOWA/15/30 PRRP2_INBAC RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SWINE/TENNESSEE/26/77) PRRP2_INBAD RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 111-196 349-390 SUBUNIT P2 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PRRP2_INBSI RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 111-196 349-390 SUBUNIT P2 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE]) PRRP3_IAANN RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 111-196 349-383 SUBUNIT P2 (STRAIN B/SINGAPORE/222/79) PRRP3_IABUD RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/ANN ARBOR/6/60) PRRP3_IACHI RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 518-567 707-755 SUBUNIT P3 (STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PRRP3_IAFPR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/CHILE/1/83) PRRP3_IAFPW RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PRRP3_IAGU2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/FOWL PLAGUE VIRUS/WEYBRID PRRP3_IAGUA RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/GULL/MARYLAND/704/77 PRRP3_IAHK6 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  7-41 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/GULL/ASTRAKHAN/227/84) PRRP3_IAHLO RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/EQUINE/KENTUCKY/2/860) PRRP3_IAHPR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/EQUINE/LONDON/1416/73) PRRP3_IAKIE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 721-755 SUBUNIT P3 (STRAIN A/EQUINE/PRAGUE/1/56) PRRP3_IAKOR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/KIEV/59/79) PRRP3_IALEI RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/KOREA/426/68) PRRP3_IALE2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/LENINGRAD/134/57) PRRP3_IALE3 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/LENINGRAD/134/17/57) PRRP3_IAMAN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/LENINGRAD/134/47/57) PRRP3_IAME8 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/MALLARD/NEW YORK/6750/78) PRRP3_IANT6 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  7-41 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/MEMPHIS/8/88) PRRP3_IAPUE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/NT/60/68) PRRP3_IARUD RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/PUERTO RICO/8/34) PRRP3_IASE2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/RUDDY TURNSTONE/NEW JERSE PRRP3_IASIN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/SEAL/MASSACHUSETTS/133/82) PRRP3_IATKM RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/SINGAPORE/1/57) PRRP3_IAVI7 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/TURKEY/MINNESOTA/833/80) PRRP3_IAWIL RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/VICTORIA/3/75) PRRP3_IAZI1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/WILSON-SMITH/33 PRRP3_IAZTE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/SWINE/IOWA/15/30) PRRP3_INBAC RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  7-41 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/SWINE/TENNESSEE/24/77 PRRP3_INBAD RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 458-533 SUBUNIT P3 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PRRP3_INCBE RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 458-533 SUBUNIT P3 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE]) PRRP3_INCJJ RNA-DIRECTED RNA POLYMERASE INFLUENZA C VIRUS 235-269 275-309 SUBUNIT P3 (STRAIN C/BERLIN/1/85) PRRP3_THOGV RNA-DIRECTED RNA POLYMERASE INFLUENZA C VIRUS 235-269 275-316 SUBUNIT P3 (STRAIN C/JJ/50) PRRPA_CVH22 RNA-DIRECTED RNA POLYMERASE THOGOTO VIRUS 343-401 SUBUNIT P3 PRRPA_CVMJH RNA-DIRECTED RNA POLYMERASE HUMAN CORONAVIRUS (STRAIN 229E) 358-392 495-571 1742- 1971- 3664- 3912- 1776 2008 3724 3946 PRRPB_BEV RNA-DIRECTED RNA POLYMERASE MURINE CORONAVIRUS MHV (STRAIN JHM) 617-651 1364- 2769- 3586- 3821- 4075- 4319- 1398 2803 3620 3855 4121 4353 PRRPB_CVMA5 RNA-DIRECTED RNA POLYMERASE BERNE VIRUS 20-64 617-651  943- 1009 PRRPB_CVMJH RNA-DIRECTED RNA POLYMERASE MURINE CORONAVIRUS MHV (STRAIN A59) 1129- 1303- 1453- 1692- 2629- 1170 1337 1494 1726 2670 PRRPB_IBVB RNA-DIRECTED RNA POLYMERASE MURINE CORONAVIRUS MHV (STRAIN JHM) 1129- 1303- 1453- 1690- 2627- 1170 1337 1494 1724 2668 PRRPB_IBVK RNA-DIRECTED RNA POLYMERASE AVIAN INFECTIOUS BRONCHITIS VIRUS 499-550 650-695 1460- 1509- 2246- (STRAIN BEAUDETTE) 1494 1548 2287 PRRPL_BTV10 RNA-DIRECTED RNA POLYMERASE AVIAN INFECTIOUS BRONCHITIS VIRUS 115-156 (STRAIN KB8523) PRRPL_BUNYW RNA-DIRECTED RNA POLYMERASE BLUETONGUE VIRUS 308-342 705-748 825-903 1021- 1114- (SEROTYPE 10/ISOLATE USA) 1076 1201 PRRPL_CDVO RNA POLYMERASE BUNYAMWERA VIRUS  2-36  80-114 308-363 371-412 1704- 1802- 1889- 1741 1861 1935 PRRPL_HANTV RNA POLYMERASE BETA SUBUNIT CANINE DISTEMPER VIRUS 20-54 (STRAIN ONDERSTEPOORT) PRRPL_HRSVA RNA POLYMERASE HANTAAN VIRUS (STRAIN 76-118)  98-139 174-208 372-431 557-591 655-696 731-783 905-949 1276- 1310 1419- 1742- 1993- 1453 1776 2027 PRRPL_MABVM RNA POLYMERASE BETA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS  87-188 827-861 1131- 1185- 1465- (STRAIN A2 1179 1220 1517 PRRPL_MABVP RNA-DIRECTED RNA POLYMERASE MARBURG VIRUS (STRAIN MUSOKE) 597-631 1046- 1490- 1804- 2029- 2194- 1092 1552 1838 2063 2266 PRRPL_MEASE RNA-DIRECTED RNA POLYMERASE MARBURG VIRUS (STRAIN POPP) 597-631 1046- 1490- 1092 1552 PRRPL_MUMPM RNA POLYMERASE BETA SUBUNIT MEASLES VIRUS (STRAIN EDMONSTON) 197-231 790-824 869-903 1064- 1283- 2121- 1109 1317 2155 PRRPL_NDVB RNA POLYMERASE BETA SUBUNIT MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 164-214 220-254 267-304 576-627 752-807 1231- 1447- 1487- 1286 1481 1531 1566- 2191- 1600 2225 PRRPL_PI2HT RNA POLYMERASE BETA SUBUNIT NEWCASTLE DISEASE VIRUS 167-208 230-295 1969- 2043- 2108- (STRAIN BEAUDETTE C/45) 2013 2077 2142 PRRPL_PI3H4 RNA POLYMERASE BETA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS 136-170 575-628 750-785 1226- 1316- 1417- 1564- 1687- (STRAIN TOSHIBA) 1284 1357 1479 1630 1721 1901- 1955 PRRPL_PUUMH RNA POLYMERASE BETA SUBUNIT HUMAN PARAINFLUENZA 3 VIRUS 48-91 107-163 540-574 747-781 1064- 1293- 1499- 1994- (STRAIN NIH 47885) 1129 1356 1536 2036 PRRPL_RABVP RNA-DIRECTED RNA POLYMERASE PUUMALA VIRUS (STRAIN HALLNAS B1)  98-132 381-415 444-488 557-591 655-696 731-783 922-976 1119- 1153 1742- 1940- 1993- 1776 1975 2032 PRRPL_RABVS RNA POLYMERASE BETA SUBUNIT RABIES VIRUS (STRAIN PV)  73-114 197-231 696-730 1174- 1522- 1584- 2068- 1222 1580 1618 2123 PRRPL_RDV RNA POLYMERASE BETA SUBUNIT RABIES VIRUS (STRAIN SAD B19)  73-114 197-231 696-730 749-783 1174- 1522- 1584- 1222 1580 2123 PRRPL_RVFVZ RNA-DIRECTED RNA POLYMERASE RICE DWARF VIRUS 17-61 534-575 844-878 918-985 1037- 1071 PRRPL_SEND5 RNA-DIRECTED RNA POLYMERASE RIFT VALLEY FEVER VIRUS (STRAIN ZH-548 M12) 398-439 641-678 832-887 1081- 1653- 1819- 1115 1687 1870 PRRPL_SENDE RNA POLYMERASE BETA SUBUNIT SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 309-343 540-600 612-656 747-781 1064- 1239- 1499- 2000- 1119 1280 1536 2034 2146- 2216 PRRPL_SENDZ RNA POLYMERASE BETA SUBUNIT SENDAI VIRUS (STRAIN ENDERS) 129-163 360-420 432-476 567-601 884-939 1059- 1319- 1820- 1100 1356 1854 1966- 2036 PRRPL_SEOU8 RNA POLYMERASE BETA SUBUNIT SENDAI VIRUS (STRAIN Z) 309-343 540-600 612-656 747-781 1064- 1239- 1499- 2000- 1119 1280 1536 2034 2146- 2216 PRRPL_SV5WR RNA-DIRECTED RNA POLYMERASE SEOUL VIRUS (STRAIN 80-39)  98-139 174-208 557-591 655-696 731-765 1742- 1947- 1993- 1776 1981 2027 PRRPL_SYNV RNA POLYMERASE BETA SUBUNIT SIMIAN VIRUS 5 (STRAIN 21004-WR) 547-627 747-781 1225- 1319- 1592- 1676- 2024- 1280 1353 1626 1715 2058 PRRPL_TSWVB RNA POLYMERASE BETA SUBUNIT SONCHUS YELLOW NET VIRUS 760-794 825-859  977- 1089- 1978- 2059- 1014 1137 2032 2107 PRRPL_UUK RNA-DIRECTED RNA POLYMERASE TOMATO SPOTTED WILT VIRUS  46-101 399-433 539-573 589-634 1119- 1195- 1321- 1538- (BRAZILIAN ISOLATE CPNH1/BR 1153 1236 1379 1572 1684- 1857- 2073- 2156- 2206- 2315- 2378- 2809- 1725 1898 2127 2200 2247 2368 2419 2843 PRRPL_VSVJH RNA POLYMERASE UUKUNIEMI VIRUS 127-183 282-323 836-874 1030- 1481- 2015- 2061- 1071 1515 2049 2098 PRRPL_VSVJO RNA POLYMERASE BETA SUBUNIT VESICULAR STOMATITIS VIRUS 319-358 674-715 720-763 1522- 1802- (SEROTYPE NEW JERSEY/STRA 1567 1836 PRRPL_VSVSJ RNA POLYMERASE BETA SUBUNIT VESICULAR STOMATITIS VIRUS 319-358 674-715 720-763 1802- (SEROTYPE NEW JERSEY/STRA 1836 PRRPO_ACLSV RNA POLYMERASE BETA SUBUNIT VESICULAR STOMATITIS VIRUS 674-715 720-763 1019- 1742- 2066- (STRAIN SAN JUAN) 1074 1799 2107 PRRPO_BWYVF RNA-DIRECTED RNA POLYMERASE APPLE CHLOROTIC LEAF SPOT VIRUS 228-262 557-596 916-950 1235- 1269 PRRPO_BYDV1 PUTATIVE RNA-DIRECTED RNA BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 304-341 POLYMERASE PRRPO_BYDVP PUTATIVE RNA-DIRECTED RNA BARLEY YELLOW DWARF VIRUS 234-285 POLYMERASE (ISOLATE MAV-PS1) PRRPO_BYDVR PUTATIVE RNA-DIRECTED RNA BARLEY YELLOW DWARF VIRUS 234-285 POLYMERASE (ISOLATE PAV) PRRPO_CARMV PUTATIVE RNA-DIRECTED RNA BARLEY YELLOW DWARF VIRUS 234-285 POLYMERASE (ISOLATE P-PAV) PRRPO_CGMVS PROBABLE RNA-DIRECTED RNA CARNATION MOTTLE VIRUS  93-131 POLYMERASE PRRPO_IBDVS PUTATIVE RNA-DIRECTED RNA CUCUMBER GREEN MOTTLE MOSAIC VIRUS  7-41 387-428 446-480 726-767 1445- POLYMERASE (WATERMELON STR 1479 PRRPO_IBDVA PUTATIVE RNA-DIRECTED RNA AVIAN INFECTIOUS BURSAL DISEASE 384-432 446-484 POLYMERASE VIRUS (STRAIN 52/70) PRRPO_IPNVJ PUTATIVE RNA-DIRECTED RNA AVIAN INFECTIOUS BURSAL DISEASE 144-185 266-307 709-757 771-809 POLYMERASE VIRUS (STRAIN AUSTRALI PRRPO_IPNVS PUTATIVE RNA-DIRECTED RNA INFECTIOUS PANCREATIC NECROSIS VIRUS 147-181 268-407 501-535 750-802 POLYMERASE (SEROTYPE JASPER) PRRPO_LYCVA PUTATIVE RNA-DIRECTED RNA INFECTIOUS PANCREATIC NECROSIS VIRUS 147-181 366-407 501-535 753-802 POLYMERASE (SEROTYPE SP) PRRPO_LYCVW RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 301-346 805-886 926-960 1509- 2090- (STRAIN ARMSTRON 1543 2124 PRRPO_MCMV RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 301-345 (STRAIN WE) PRRPO_PEAMV PROBABLE RNA-DIRECTED RNA MAIZE CHLOROTIC MOTTLE VIRUS 181-215 697-731 POLYMERASE PRRPO_PLRV1 RNA-DIRECTED RNA POLYMERASE PEA ENATION MOSAIC VIRUS 321-358 PRRPO_PLRVW PUTATIVE RNA-DIRECTED RNA POTATO LEAFROLL VIRUS (STRAIN 1) 336-373 423-457 POLYMERASE PRRPO_PPMVS PUTATIVE RNA-DIRECTED RNA POTATO LEAFROLL VIRUS 336-373 423-457 POLYMERASE (STRAIN WAGENINGEN) PRRPO_RCNMV PUTATIVE RNA-DIRECTED RNA PEPPER MILD MOTTLE VIRUS 321-362 402-454 627-661 862-896 POLYMERASE (STRAIN SPAIN PRRPO_REOVD PUTATIVE RNA-DIRECTED RNA RED CLOVER NECROTIC MOSAIC VIRUS 666-700 POLYMERASE PRRPO_REOVJ RNA-DIRECTED RNA POLYMERASE REOVIRUS (TYPE 3/STRAIN DEARING) 310-361 PRRPO_REOVL RNA-DIRECTED RNA POLYMERASE REOVIRUS (TYPE 2/STRAIN D5/JONES) 310-344 PRRPO_ROTBR RNA-DIRECTED RNA POLYMERASE REOVIRUS (TYPE 1/STRAIN LANG) 310-361 PRRPO_ROTBU RNA-DIRECTED RNA POLYMERASE BOVINE ROTAVIRUS (STRAIN RF) 60-96 133-167 204-245 535-569 579-631 639-686 690-724 771-805 SUBUNIT VP1 PRRPO_ROTPC RNA-DIRECTED RNA POLYMERASE BOVINE ROTAVIRUS (STRAIN UK) 60-96 133-167 204-245 535-569 579-631 639-686 690-724 771-805 SUBUNIT VP1 PRRPO_ROTPG RNA-DIRECTED RNA POLYMERASE PORCINE ROTAVIRUS  3-44 255-299 335-397 476-510 518-620  966- SUBUNIT VP1 (GROUP C/STRAIN COWDEN) 1007 PRRPO_ROTS1 RNA-DIRECTED RNA POLYMERASE PORCINE ROTAVIRUS (STRAIN GOTTFRIED) 62-96 133-167 336-377 581-631 636-686 690-724 771-842 SUBUNIT VP1 PRRPO_SBMV RNA-DIRECTED RNA POLYMERASE SIMIAN 11 ROTAVIRUS (STRAIN SA11) 60-96 133-167 535-569 579-631 639-686 690-724 771-805 SUBUNIT VP1 PRRPO_SCVLA PROBABLE RNA-DIRECTED RNA SOUTHERN BEAN MOSAIC VIRUS 628-665 POLYMERASE PRRPO_TACV RNA-DIRECTED RNA POLYMERASE SACCHAROMYCES CEREVISIAE VIRUS L-A 100-134 147-191 PRRPO_TMGMV RNA POLYMERASE TACARIBE VIRUS 155-204 220-278 375-416 484-518 891-925 1030- 1285- 1981- 1081 1319 2015 PRRPO_TMV PUTATIVE RNA-DIRECTED RNA TOBACCO MILD GREEN MOSAIC VIRUS 401-449 682-720 765-818 POLYMERASE (TMV STRAIN U2) PRRPO_TMVKR PUTATIVE RNA-DIRECTED RNA TOBACCO MOSAIC VIRUS (VULGARE)  3-37 401-453 665-699 POLYMERASE PRRPO_TMVTO PUTATIVE RNA-DIRECTED RNA TOBACCO MOSAIC VIRUS (STRAIN KOREAN)  3-37 401-453 665-699 POLYMERASE PRRPO_TNVD PUTATIVE RNA-DIRECTED RNA TOBACCO MOSAIC VIRUS (STRAIN TOMATO/L)  3-37 401-453 860-894 POLYMERASE PRRPP_BRSVA RNA-DIRECTED RNA POLYMERASE TOBACCO NECROSIS VIRUS (STRAIN D) 102-144 PRRPP_CDVO RNA POLYMERASE ALPHA SUBUNIT BOVINE RESPIRATORY SYNCYTIAL VIRUS  99-158 160-216 (STRAIN A51908) PRRPP_HRSV RNA POLYMERASE ALPHA SUBUNIT CANINE DISTEMPER VIRUS 312-373 (STRAIN ONDERSTEPOORT) PRRPP_HRSV1 RNA POLYMERASE ALPHA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS  99-158 160-216 PRRPP_HRSVA RNA POLYMERASE ALPHA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS  99-158 160-216 (SUBGROUP B/STRAI PRRPP_HRSVL RNA POLYMERASE ALPHA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS  99-158 160-216 (STRAIN A2) PRRPP_MEASE RNA POLYMERASE ALPHA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS  99-158 160-216 (SUBGROUP A/STRAI PRRPP_MEASI RNA POLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAIN EDMONSTON) 315-374 460-495 PRRPP_MEASY RNA POLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAIN IP-3-CA) 315-374 460-495 PRRPP_MUMP1 RNA POLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAIN YAMAGATA-1) 315-374 460-495 PRRPP_MUMPE RNA POLYMERASE ALPHA SUBUNIT MUMPS VIRUS (STRAIN SBL-1) 149-183 213-275 PRRPP_MUMPM RNA POLYMERASE ALPHA SUBUNIT MUMPS VIRUS (STRAIN ENDERS) 214-276 PRRPP_NDVA RNA POLYMERASE ALPHA SUBUNIT MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 214-276 PRRPP_NDVB RNA POLYMERASE ALPHA SUBUNIT NEWCASTLE DISEASE VIRUS 100-134 (STRAIN AUSTRALIA-VICTORIA/32) PRRPP_PI1HB RNA POLYMERASE ALPHA SUBUNIT NEWCASTLE DISEASE VIRUS 100-138 (STRAIN BEAUDETTE C/45) PRRPP_PI1HC RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 1 VIRUS  80-114 313-364 375-437 (STRAIN C35) PRRPP_PI1HD RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 1 VIRUS  80-114 313-364 375-437 (STRAIN C39) PRRPP_PI1HE RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 1 VIRUS  80-114 313-364 375-437 (STRAIN CI-5/73) PRRPP_PI2H RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 1 VIRUS  66-114 237-271 313-364 375-437 (STRAIN CI-14/830) PRRPP_PI2HT RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS 218-281 PRRPP_PI3B RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS 218-281 (STRAIN TOSHIBA) PRRPP_PI3H4 RNA POLYMERASE ALPHA SUBUNIT BOVINE PARAINFLUENZA 3 VIRUS  31-130 414-470 PRRPP_PI4HA RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 3 VIRUS 410-499 (STRAIN NIH 47885) PRRPP_PI4HB RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 4A VIRUS  4-38 222-285 (STRAIN TOSHIBA) PRRPP_PIRYV RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 4B VIRUS 222-285 (STRAIN 68-333) PRRPP_RABVA RNA POLYMERASE ALPHA SUBUNIT PIRY VIRUS 137-174 PRRPP_RABVC RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN AVO1)  93-127 PRRPP_RABVE RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN CVS-11)  93-127 PRRPP_RABVP RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN ERA), AND (STRAIN PM)  93-127 PRRPP_RABVS RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN PV)  93-127 PRRPP_SEND5 RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN SAD B19  93-127 PRRPP_SEND6 RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 313-364 375-447 PRRPP_SENDF RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN 6/94) 323-364 375-447 PRRPP_SENDH RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN FUSHIMI) 313-364 375-447 PRRPP_SENDZ RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN HARRIS) 313-364 375-447 PRRPP_SV5 RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN Z) 313-364 375-447 PRRPP_SYNV RNA POLYMERASE ALPHA SUBUNIT SIMIAN VIRUS 5 (STRAIN W3) 205-278 PRRPP_VSVIG RNA POLYMERASE ALPHA SUBUNIT SONCHUS YELLOW NET VIRUS 138-173 233-281 PRRPP_VSVIM RNA POLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS  3-43 (SEROTYPE INDIANA/STRAIN G PRRPP_VSVJM RNA POLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS  3-43 (SEROTYPE INDIANA/STRAIN M PRRPP_VSVJO RNA POLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS  3-37 (SEROTYPE NEW JERSEY/STRA PRRPP_VSVSJ RNA POLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS  3-37 (SEROTYPE NEW JERSEY/STRA PSPHR_AMEPV RNA POLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS  3-43 (STRAIN SAN JUAN) PSP12_VACCV SPHEROIDIN AMSACTA MOOREI ENTOMOPOXVIRUS 223-264 361-395 PSP12_VARV SERINE PROTEINASE INHIBITOR VACCINIA VIRUS (STRAIN WR) 21-86 PSP13_VACCC SERINE PROTEINASE INHIBITOR 2 VARIOLA VIRUS 21-86 PSP13_VACCV SERINE PROTEINASE INHIBITOR 3 VACCINIA VIRUS (STRAIN COPENHAGEN) 118-167 225-266 PSP13_VARV SERINE PROTEINASE INHIBITOR 3 VACCINIA VIRUS (STRAIN WR) 118-167 225-266 PSPIA_VACCC SERINE PROTEINASE INHIBITOR 3 VARIOLA VIRUS 122-171 229-270 PT2C2_CHVP1 SERINE PROTEINASE INHIBITOR 2 VACCINIA VIRUS (STRAIN COPENHAGEN) 11-65 HOMOLOG FIRST PTAA2_VACCV TYPE II RESTRICTION ENZYME CVIAII PARAMECIUM BURSARIA CHLORELLA VIRUS 1 48-85 PTAG8_FOWPV TRANS-ACTIVATOR PROTEIN A2 VACCINIA VIRUS (STRAIN WR, COPENHAGEN,  95-133 173-207 AND VARIOLA VI PTAG8_VACCV TRANS-ACTIVATOR PROTEIN FP0 FOWLPOX VIRUS  3-51 PTAG8_VARV TRANS-ACTIVATOR PROTEIN GK1 VACCINIA VIRUS (STRAIN WR),  3-51 (STRAIN COPENHAGEN) PTALA_BFDV TRANS-ACTIVATOR PROTEIN GK1 VARIOLA VIRUS  3-51 PTALA_POVBO LARGE T ANTIGEN BUDGERIGAR FLEDGLING DISEASE VIRUS 291-325 464-498 PTALA_POVHA LARGE T ANTIGEN BOVINE POLYOMAVIRUS 303-337 495-537 PTALA_POVJC LARGE T ANTIGEN HAMSTER POLYOMAVIRUS 464-501 587-621 PTALA_POVLY LARGE T ANTIGEN POLYOMAVIRUS JC 153-187 589-623 PTALA_POVM3 LARGE T ANTIGEN LYMPHOTROPIC POLYOMAVIRUS  3-41 206-258 437-478 PTALA_POVMA LARGE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN 3) 509-544 PTALA_POVMC LARGE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN A2) 507-542 PTAMI_POVHA LARGE T ANTIGEN MOUSE POLYOMAVIRUS 504-539 (STRAIN CRAWFORD SMALL-PLAQUE) PTAMI_POVM3 MIDDLE T ANTIGEN HAMSTER POLYOMAVIRUS 339-378 PTAMI_POVMA MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN 3) 211-245 388-422 PTAMI_POVMC MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN A2) 192-226 369-403 PTASM_POVBO MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS 192-226 369-403 (STRAIN CRAWFORD SMALL-PLAQUE) PTASM_POVLY SMALL T ANTIGEN BOVINE POLYOMAVIRUS 41-85 PTATR_NPVAC SMALL T ANTIGEN LYMPHOTROPIC POLYOMAVIRUS  3-41 PTATR_NPVBM TRANS-ACTIVATING TRANSCRIPTIONAL AUTOGRAPHA CALIFORNICA NUCLEAR 408-442  46-480 489-523 REGULAT POLYHEDROSIS VIRUS PTATR_NPVOP TRANS-ACTIVATING TRANSCRIPTIONAL BOMBYX MORI NUCLEAR POLYHEDROSIS 413-447 451-485 494-528 REGULAT VIRUS PTAT_SIVA1 TRANS-ACTIVATING TRANSCRIPTIONAL ORGYIA PSEUDOTSUGATA MULTICAPSID 391-455 511-554 REGULAT POLYHEDROSIS VIRUS PTAT_SIVAI TAT PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS  73-109 (AGM155 ISOLATE) PTAT_VILV TAT PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 137-185 (ISOLATE AGM/CLONE GR1 PTAT_VILV1 TRANS-ACTIVATING TRANSCRIPTIONAL VISNA LENTIVIRUS (STRAIN 1514) 28-74 REGULAT PTAT_VILV2 TRANS-ACTIVATING TRANSCRIPTIONAL VISNA LENTIVIRUS 40-74 REGULAT (STRAIN 1514/CLONE LV1-1KS1) PTCB_FLV TRANS-ACTIVATING TRANSCRIPTIONAL VISNA LENTIVIRUS 40-74 REGULAT (STRAIN 1514/CLONE LV1-1KS2) PTEGP_HSV11 T-CELL RECEPTOR BETA CHAIN PRECURSOR FELINE LEUKEMIA VIRUS 279-321 PTEGP_HSVEA TEGUMENT PHOSPHOPROTEIN US9 HERPES SIMPLEX VIRUS 27-61 (TYPE 1/STRAIN 17) PTEGP_HSVEB NONSENSE PTEGP_HSVEK NONSENSE PTEGP_HSVSB NONSENSE PTEGU_EBV NONSENSE PTEGU_HCMVA LARGE TEGUMENT PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 768-802 821-855 938-972 1101- 1208- 1479- 1700- 1809- 1138 1242 1516 1753 1867 1870- 1920- 3108- 1916 1954 3149 PTEGU_HSV11 PROBABLE LARGE TEGUMENT PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 34-71 215-249 543-581 700-738 868-909 936-977 1004- 1163- 1038 1200 1237- 2200- 1296 2235 PTEGU_HSV6G LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 731-765 801-842 1022- 1223- 1275- 1315- 1520- 1609- (TYPE 1/STRAIN 17) 1059 1269 1309 1370 1531 1669 1673- 1749- 1820- 2670- 1714 1783 1854 2704 PTEGU_HSVEB LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 30-71 224-262 567-608 712-757  951- 1091- 1192- 1357- (TYPE 6/STRAIN GS) 1000 1181 1233 1400 PTEGU_HSVSA LARGE TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 560-597 635-683 794-848 908-956 1108- 1155- 1399- 1487- (STRAIN AB4P) 1151 1246 1458 1549 1619- 1661- 1702- 1806- 1947- 1657 1695 1736 1843 1981 PTEGU_VZVD PROBABLE LARGE TEGUMENT PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 520-558 560-598 615-652 672-710 777-822 846-898 948-986 1287- 1332 1434- 1502 PTERM_ADE02 LARGE TEGUMENT PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 657-696 713-747 804-841 933-972 1117- 1415- 1528- 1572- 1158 1471 1562 1620 1633- 1719- 1945- 2727- 1705 1756 1986 2761 PTERM_ADE05 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 2 490-572 PTERM_ADE07 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 5 490-592 PTERM_ADE12 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 7 491-559 PTJUN_AVIS1 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 12 443-491 497-538 PTMAF_AVIS4 TRANSFORMING PROTEIN JUN AVIAN SARCOMA VIRUS (STRAIN 17) 210-284 PTOP1_SFVKA TRANSFORMING PROTEIN MAF AVIAN MUSCULOAPONEUROTIC 247-288 295-340 FIBROSARCOMA VIRUS AS42 PTOP2_ASFB7 DNA TOPOISOMERASE SHOPE FIBROMA VIRUS (STRAIN KASZA) 127-183 269-310 PTOP2_ASFM2 DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 146-180 481-515 601-642 945-979 1038- 1123- 1093 1162 PTSIS_SMSAV DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS 146-180 480-514 600-641 902-936 944-978 1038- 1122- (ISOLATE MALAWI LIL 20/1) 1091 1161 PTYSY_VZVD PDGF-RELATED TRANSFORMING SIMIAN SARCOMA VIRUS 16-71 PROTEIN P28-SIS PUBIL_NPVOP THYMIDYLATE SYNTHASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 215-260 PUL01_HCMVA UBIQUITIN-LIKE PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 43-80 POLYHEDROSIS VIRUS PUL03_HSV13 HYPOTHETICAL PROTEIN UL1 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 169-203 PUL03_HSV2H PROTEIN UL3 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)  94-128 PUL03_HSVEB PROTEIN UL3 HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52)  92-126 PUL04_HSV11 GENE 60 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)  70-104 PUL06_EBV PROTEIN UL4 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 102-136 PUL06_HCMVA VIRION PROTEIN BBRF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 104-145 313-347 376-410 PUL06_HSV11 HYPOTHETICAL PROTEIN UL6 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 216-250 PUL06_HSVEB VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 36-94 103-141 294-329 337-371 416-479 PUL06_HSVSA VIRION GENE 56 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)  62-170 357-413 448-503 PUL06_VZVD VIRION GENE 43 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  90-140 151-194 302-336 364-405 PUL08_HCMVA VIRION GENE 54 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)  87-131 350-409 704-738 PUL09_HSVEB HYPOTHETICAL PROTEIN UL8 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  6-50 PUL09_VZVD ORIGIN OF REPLICATION BINDING PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 174-208 PUL11_HCMVA ORIGIN OF REPLICATION BINDING PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 122-163 PUL13_HCMVA NONSENSE PUL14_HCMVA HYPOTHETICAL PROTEIN UL13 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 47-81 185-227 PUL14_HSVEB HYPOTHETICAL PROTEIN UL14 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 305-343 PUL14_PRVN3 HYPOTHETICAL GENE 48 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 52-96 246-283 PUL14_VZVD UL14 PROTEIN HOMOLOG PSEUDORABIES VIRUS (STRAIN NIA-3) 43-95 PUL16_HSVEB HYPOTHETICAL GENE 46 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)  61-103 PUL17_HSV6U GENE 46 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 266-300 PUL21_HSVEB PROTEIN 10R HERPES SIMPLEX VIRUS 239-280 (TYPE 6/STRAIN UGANDA-1102 PUL23_HCMVA GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 44-78 421-474 PUL24_HCMVA HYPOTHETICAL PROTEIN UL23 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 213-253 PUL24_ILTVT HYPOTHETICAL PROTEIN UL24 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  5-39 PUL25_HCMVA PROTEIN UL24 HOMOLOG INFECTIOUS LARYNGOTRACHEITIS VIRUS 161-195 (STRAIN THORNE V88 PUL25_HSV11 HYPOTHETICAL PROTEIN UL25 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 255-341 351-399 PUL25_HSVEB VIRION PROTEIN UL25 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 370-411 PUL25_HSVSA VIRION PROTEIN UL25 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 364-413 PUL25_ILTVT VIRION GENE 19 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 29-92 183-231 365-406 PUL25_VZVD 64.1 KD VIRION PROTEIN INFECTIOUS LARYNGOTRACHEITIS VIRUS 38-84 165-206 (STRAIN THORNE V88 PUL31_HCMVA VIRION GENE 34 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 340-388 PUL31_HSVEB HYPOTHETICAL PROTEIN UL31 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 244-285 PUL31_VZVD GENE 29 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 153-187 PUL32_HSVEB GENE 27 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 163-197 PUL32_VZVD MAJOR ENVELOPE GLYCOPROTEIN 300 EQUINE HERPESVIRUS TYPE 1 342-376 (STRAIN AB4P) (STRAIN AB1) PUL33_HCMVA PROBABLE MAJOR ENVELOPE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)  72-106 296-344 GLYCOPROTEIN 26 PUL33_VZVD G-PROTEIN COUPLED RECEPTOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  94-135 309-352 HOMOLOG UL33 PUL34_EBV GENE 25 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 29-63 PUL34_HCMVA BFRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 159-200 PUL34_HSV11 HYPOTHETICAL PROTEIN UL34 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 113-147 PUL35_HCMVA VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 187-221 PUL37_EBV HYPOTHETICAL PROTEIN UL35 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 231-268 PUL37_HSV11 PROTEIN BOLF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 708-742 PUL37_HSVEB PROTEIN UL37 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 853-891 PUL37_HSVSA GENE 23 PROTEIN EQUINEHERPES VIRUS TYPE 1 (STRAIN AB4P)  82-137 311-345 614-648 715-750 781-822 PUL37_VZVD GENE 63 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  6-65 682-741 PUL38_HCMVA GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 719-753 786-827 PUL41_VZVD HYPOTHETICAL PROTEIN UL38 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 10-51 PUL42_HSV11 HOST SHUTOFF VIRION PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 330-366 PUL42_HSVEB DNA-BINDING PROTEIN UL42 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 134-168 221-263 PUL43_HCMVA DNA-BINDING GENE 18 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 138-172 PUL43_HSVE4 HYPOTHETICAL PROTEIN UL43 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  72-109 PUL43_VZVD MEMBRANE PROTEIN UL43 HOMOLOG EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 27-68 PUL45_HSV1K GENE 15 MEMBRANE PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 312-363 PUL45_HSV1M PROTEIN UL45 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS)  96-137 PUL47_HCMVA PROTEIN UL45 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN MP)  96-137 PUL47_HSV11 PROTEIN UL47 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 114-165 448-485 745-856 PUL47_HSV1F VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 473-518 PUL47_HSVBP VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F 473-518 PUL47_HSVE4 80.7 KD ALPHA TRANS-INDUCING PROTEIN BOVINE HERPESVIRUS TYPE 1 (STRAIN P8-2) 561-612 PUL47_HSVEB 97 KD ALPHA TRANS-INDUCING PROTEIN EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 183-246 582-620 825-866 PUL47_VZVD 97 KD ALPHA TRANS-INDUCING PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 219-253 371-412 817-866 PUL50_HCMVA ALPHA TRANS-INDUCING FACTOR 91.8 KD VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)  84-135 156-209 664-701 PROTEIN PUL51_HSV11 PROTEIN UL50 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 155-189 PUL51_HSVE4 PROTEIN UL51 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 118-169 PUL51_HSVEB GENE 8 PROTEIN EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 121-162 PUL51_VZVD GENE 8 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 120-161 PUL52_EBV GENE 7 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 122-163 PUL52_HSV11 PROBABLE DNA REPLICATION EPSTEIN-BARR VIRUS (STRAIN B95-8) 188-255 PROTEIN BSLF1 PUL52_HSVEB DNA REPLICATION PROTEIN UL52 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 189-223 PUL52_HSVSA DNA REPLICATION PROTEIN UL52 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 141-182 929-970 PUL52_VZVD PROBABLE DNA REPLICATION GENE 56 HERPESVIRUS SAIMIRI (STRAIN 11) 445-483 PROTEIN PUL53_HCMVA PROBABLE DNA REPLICATION GENE 6 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 301-342 PROTEIN PUL55_HSV2H PROTEIN UL53 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 12-48 PUL64_HCMVA PROTEIN UL55 HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 151-185 PUL70_HCMVA HYPOTHETICAL PROTEIN UL64 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 32-73 PUL74_HCMVA PROBABLE DNA REPLICATION PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 39-99 UL70 PUL87_HSV6U HYPOTHETICAL PROTEIN UL74 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 43-79 PUL87_HSVSA HYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS 729-770 (TYPE 6/STRAIN UGANDA-1102) PUL88_HCMVA HYPOTHETICAL GENE 24 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 366-400 582-616 PUL91_HSVSA HYPOTHETICAL PROTEIN UL88 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 357-391 PUL92_EBV HYPOTHETICAL GENE 30 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 24-58 PUL92_HCMVA HYPOTHETICAL PROTEIN BDLF4 EPSTEIN-BARR VIRUS (STRAIN B95-8) 107-144 188-222 PUL92_HSV6U HYPOTHETICAL PROTEIN UL92 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  79-116 PUL92_HSVSA HYPOTHETICAL PROTEIN 9R HERPES SIMPLEX VIRUS 101-145 174-216 (TYPE 6/STRAIN UGANDA-1102) PUL93_HCMVA HYPOTHETICAL GENE 31 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  88-122 PUL95_HCMVA PROTEIN UL93 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 23-57 299-384 PUL95_HSV6U HYPOTHETICAL PROTEIN UL95 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 34-71 259-293 PUL96_HCMVA HYPOTHETICAL PROTEIN 13R HERPES SIMPLEX VIRUS  73-151 233-270 (TYPE 6/STRAIN UGANDA-1102) PUL96_HSV6U HYPOTHETICAL PROTEIN UL96 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  51-103 PUL96_HSVSA HYPOTHETICAL PROTEIN 14R HERPES SIMPLEX VIRUS  53-113 (TYPE 6/STRAIN UGANDA-1102) PULA2_HCMVA HYPOTHETICAL GENE 35 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  45-100 PULA4_HCMVA HYPOTHETICAL PROTEIN UL102 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  6-40 758-792 PULD0_HCMVA VIRION PROTEIN UL104 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  1-56 130-171 330-364 439-492 541-575 PUNG_HSV11 HYPOTHETICAL PROTEIN UL130 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  84-125 PUNG_HSV23 URACIL-DNA GLYCOSYLASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 227-268 PUNG_HSV2H URACIL-DNA GLYCOSYLASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 333) 188-229 PUNG_HSVSA URACIL-DNA GLYCOSYLASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52 148-189 PUNG_SFVKA URACIL-DNA GLYCOSYLASE HERPESVIRUS SAIMIRI (STRAIN 11) 135-176 PUS02_HSVEB URACIL-DNA GLYCOSYLASE SHOPE FIBROMA VIRUS (STRAIN KASZA)  81-115 PUS02_HSVEK GENE 68 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)  79-120 PUS07_HCMVA US1 PROTEIN EQUINE HERPESVIRUS TYPE 1  86-120 (STRAIN KENTUCKY A) PUS11_HCMVA HYPOTHETICAL PROTEIN HXLF5  2-36 PUS14_HCMVA HYPOTHETICAL PROTEIN HXLF1 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) PUS18_HCMVA HYPOTHETICAL PROTEIN HVLF4 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  3-51 PUS23_HCMVA MEMBRANE PROTEIN HWLF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 187-225 PUS24_HCMVA HYPOTHETICAL PROTEIN HHLF7 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 294-335 535-578 PUS26_HCMVA HYPOTHETICAL PROTEIN HHLF6 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 135-172 PUS27_HCMVA HYPOTHETICAL PROTEIN HHLF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 535-584 PUS30_HCMVA G-PROTEIN COUPLED RECEPTOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  6-40 HOMOLOG US27 PV125_AMVLE HYPOTHETICAL PROTEIN HHRF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 135-169 274-312 PV143_NPVAC 125 KD PROTEIN ALFALFA MOSAIC VIRUS 18-52 326-367 591-649 (STRAIN 425/ISOLATE LEIDEN PV16K_TRVPS HELICASE AUTOGRAPHA CALIFORNICA NUCLEAR 313-350 1114- 1179- POLYHEDROSIS VIRUS 1150 1213 PV16K_TRVSY 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PSG)  75-117 PV1A_BBMV 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN SYM)  75-117 PV1A_BMV 1A PROTEIN BROAD BEAN MOTTLE VIRUS 21-55 349-405 492-526 710-751 837-884 890-924 PV1A_CCMV 1A PROTEIN BROME MOSAIC VIRUS  4-66 348-411 PV1A_CMVFN 1A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS  4-53 242-276 348-389 487-526 PV1A_CMVO 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 11-66 393-434 584-619 868-916 PV1A_CMVQ 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN O) 11-66 393-434 584-619 868-916 PV1A_PSVJ 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Q) 11-66 393-434 PV1A_TAV 1A PROTEIN PEANUT STUNT VIRUS (STRAIN J)  4-66 PV23K_HSVTH 1A PROTEIN TOMATO ASPERMY VIRUS 11-59 392-433 857-923 PV24K_BDV 23.5 KD PROTEIN TURKEY HERPESVIRUS (STRAIN H2) 177-211 PV25K_NPVAC 24 KD ANTIGEN BORNA DISEASE VIRUS  63-121 130-171 PV28K_PLRV1 25 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR  4-50 POLYHEDROSIS VIRUS PV28K_PLRVW 28 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 116-150 PV290_ASFL5 28 KD PROTEIN POTATO LEAFROLL VIRUS 116-150 (STRAIN WAGENINGEN) PV29K_PEBV LIS 290 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN LIS57) 138-183 PV29K_TRVSY 29.6 KD PROTEIN EARLY BROWNING VIRUS 115-192 PV29K_TRVTC 29 KD PROTEIN TOBACCO RATTLE VIRUS 167-201 (STRAIN SYM), AND (STRAIN PSG) PV2A_CCMV 29 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 45-79 PV2A_CMVFN 2A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 768-806 PV2A_PSVJ 2A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 386-420 PV2A_TAV 2A PROTEIN PEANUT STUNT VIRUS (STRAIN J) 717-751 PV30K_TRVTC 2A PROTEIN TOMATO ASPERMY VIRUS 722-756 PV360_ASFB7 29.1 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 105-218 PV362_ASFB7 K′360 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 53-87 151-192 PV363_ASFB7 K′362 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V)  54-102 161-212 290-324 PV3A_BMV D′363 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 153-199 PV3A_CMVFN 3A PROTEIN BROME MOSAIC VIRUS 11-45 PV3A_CMVM 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 215-255 PV3A_CMVO 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN M) 215-255 PV3A_CMVY 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN O) 215-255 PV51K_ACLSV 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Y) 215-255 PV51K_BWYVF 50.8 KD PROTEIN APPLE CHLOROTIC LEAF SPOT VIRUS  72-106 PV51K_BWYVG 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 113-147 196-233 404-451 PV56K_PLRV1 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE GB1) 113-147 196-233 407-451 PV56K_PLRVW 56 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 47-81 438-472 PV58K_BSMV 56 KD PROTEIN POTATO LEAFROLL VIRUS 47-81 438-475 (STRAIN WAGENINGEN) PV66K_BWYVF 58 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS 128-162 323-371 PV70K_PLRV1 66.2 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 480-521 PV70K_PLRVW 69.7 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1)  98-144 514-548 PV90K_AMVLE 69.7 KD PROTEIN POTATO LEAFROLL VIRUS  98-144 409-443 514-548 (STRAIN WAGENINGEN) PVA04_VACCC 90 KD PROTEIN ALFALFA MOSAIC VIRUS 107-141 (STRAIN 425/ISOLATE LEIDEN) PVA04_VACCV PROTEIN A4 VACCINIA VIRUS (STRAIN COPENHAGEN) 32-66 231-275 PVA04_VARV PROTEIN A4 VACCINIA VIRUS (STRAIN WR) 32-66 231-275 PVA06_VACCC PROTEIN A4 VARIOLA VIRUS 22-66 210-265 PVA06_VACCV PROTEIN A6 VACCINIA VIRUS (STRAIN COPENHAGEN)  97-213 314-355 PVA06_VARV PROTEIN A6 VACCINIA VIRUS (STRAIN WR)  96-212 313-354 PVA08_VACCC PROTEIN A6 VARIOLA VIRUS  97-213 313-358 PVA08_VARV PROTEIN A8 VACCINIA VIRUS (STRAIN COPENHAGEN) 176-236 PVA09_VACCC PROTEIN A8 VARIOLA VIRUS 176-236 PVA09_VARV PROTEIN A9 VACCINIA VIRUS (STRAIN COPENHAGEN) 46-81 PVA11_VACCC PROTEIN A9 VARIOLA VIRUS 46-95 PVA11_VARV PROTEIN A11 VACCINIA VIRUS (STRAIN COPENHAGEN)  97-134 141-175 219-283 PVA12_VACCC PROTEIN A11 VARIOLA VIRUS  98-176 220-284 PVA12_VARV PROTEIN A12 VACCINIA VIRUS (STRAIN COPENHAGEN) 114-148 PVA18_VACCC PROTEIN A12 VARIOLA VIRUS 111-152 PVA18_VACCV 56 KD ABORTIVE LATE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN 433-467 PVA18_VARV 56 KD ABORTIVE LATE PROTEIN VACCINIA VIRUS (STRAIN WR) 307-341 433-467 PVA20_VACCC 56 KD ABORTIVE LATE PROTEIN VARIOLA VIRUS 307-341 433-467 PVA20_VARV PROTEIN A20 VACCINIA VIRUS (STRAIN COPENHAGEN)  1-67 PVA22_VACCC PROTEIN A20 VARIOLA VIRUS  1-67 PVA22_VARV PROTEIN A22 VACCINIA VIRUS (STRAIN COPENHAGEN) 28-69 PVA23_VACCC PROTEIN A22 VARIOLA VIRUS 39-80 PVA23_VARV PROTEIN A23 VACCINIA VIRUS (STRAIN COPENHAGEN)  95-143 173-207 255-289 344-382 PVA31_VARV PROTEIN A23 VARIOLA VIRUS  95-143 173-207 255-289 344-382 PVA32_VACCV PROTEIN A31 VARIOLA VIRUS  88-126 PVA32_VARV PROTEIN A32 VACCINIA VIRUS (STRAIN WR), AND (STRAIN COPENHAGEN PVA33_VARV PROTEIN A32 VARIOLA VIRUS 217-251 PVA36_VACCV PROTEIN A33 VARIOLA VIRUS 63-97 PVA36_VARV PROTEIN A36 PRECURSOR VACCINIA VIRUS 26-67 109-155 (STRAIN WR), AND (STRAIN COPENHAGEN) PVA37_VACCC PROTEIN A36 PRECURSOR VARIOLA VIRUS 26-67 PVA37_VACCV PROTEIN A37 VACCINIA VIRUS (STRAIN COPENHAGEN) 24-65 PVA38_VACCC PROTEIN A37 VACCINIA VIRUS (STRAIN WR) 24-65 PVA38_VACCV PROTEIN A38 VACCINIA VIRUS (STRAIN COPENHAGEN) 44-91 PVA38_VARV PROTEIN A38 VACCINIA VIRUS (STRAIN WR) 44-91 PVA39_VACCC PROTEIN A38 VARIOLA VIRUS 44-91 PVA39_VACCV PROTEIN A39 VACCINIA VIRUS (STRAIN COPENHAGEN) 37-71 PVA46_VACCC PROTEIN A39 VACCINIA VIRUS (STRAIN WR)  75-109 PVA46_VACCV PROTEIN A46 VACCINIA VIRUS (STRAIN COPENHAGEN)  81-126 PVA46_VARV PROTEIN A46 VACCINIA VIRUS (STRAIN WR)  81-126 PVA47_VACCC PROTEIN A46 VARIOLA VIRUS  81-126 PVA47_VACCV PROTEIN A47 VACCINIA VIRUS (STRAIN COPENHAGEN) 62-96 143-184 PVA47_VARV PROTEIN A47 VACCINIA VIRUS (STRAIN WR) 62-96 143-184 PVA49_VACCC PROTEIN A47 VARIOLA VIRUS 62-96 143-184 PVA49_VACCV PROTEIN A49 VACCINIA VIRUS (STRAIN COPENHAGEN)  3-40 126-160 PVA49_VARV PROTEIN A49 VACCINIA VIRUS (STRAIN WR)  3-40 126-160 PVA52_VACCC PROTEIN A49 VARIOLA VIRUS  3-40 126-160 PVA52_VACCV PROTEIN A52 VACCINIA VIRUS (STRAIN COPENHAGEN)  91-132 PVA57_VACCC PROTEIN A52 VACCINIA VIRUS (STRAIN WR)  91-132 PVA57_VACCV GUANYLATE KINASE HOMOLOG VACCINIA VIRUS (STRAIN COPENHAGEN) 134-168 PVAL1_MSVK GUANYLATE KINASE HOMOLOG VACCINIA VIRUS (STRAIN WR) 134-168 PVAL1_MSVN AL1 PROTEIN MAIZE STREAK VIRUS (KENYAN ISOLATE) 230-269 PVAL1_MSVS AL1 PROTEIN MAIZE STREAK VIRUS (NIGERIAN ISOLATE) 228-262 PVAL1_SLCV AL1 PROTEIN MAIZE STREAK VIRUS 228-262 (SOUTH-AFRICAN ISOLATE) PVAL1_TYDVA AL1 PROTEIN SQUASH LEAF CURL VIRUS 117-151 PVAL3_ABMVW AL1 PROTEIN TOBACCO YELLOW DWARF VIRUS 191-225 (STRAIN AUSTRALIA) PVAL3_BGMV AL3 PROTEIN ABUTILON MOSAIC VIRUS 44-78  83-124 (ISOLATE WEST INDIA) PVAL3_PYMVV AL3 PROTEIN BEAN GOLDEN MOSAIC VIRUS 44-78  83-124 PVAL3_SLCV AL3 PROTEIN POTATO YELLOW MOSAIC VIRUS 30-78  87-121 (ISOLATE VENEZUELA) PVAL3_TGMV AL3 PROTEIN SQUASH LEAF CURL VIRUS 46-80  91-125 PVAT_CAMVC AL3 PROTEIN TOMATO GOLDEN MOSAIC VIRUS 44-78 PVAT_CAMVD APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70  84-127 (STRAIN CM-1841) PVAT_CAMVE APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70 (STRAIN D/H) PVAT_CAMVN APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70  93-127 (STRAIN BBC) PVAT_CAMVP APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70  93-127 (STRAIN NY8153) PVAT_CAMVS APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70  93-127 (STRAIN PV147) PVAT_CAMVW APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70  93-130 (STRAIN STRASBOURG) PVAT_CERV APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 36-70 (STRAIN W260) PVB03_VACCV APHID TRANSMISSION PROTEIN CARNATION ETCHED RING VIRUS  99-138 PVB04_VACCC PROTEIN B3 VACCINIA VIRUS (STRAIN WR) 108-142 PVB04_VACCV PROTEIN B4 VACCINIA VIRUS (STRAIN COPENHAGEN)  89-123 321-372 496-530 PVB04_VARV PROTEIN B4 VACCINIA VIRUS (STRAIN WR)  89-123 321-372 PVB05_VACC0 PROTEIN B4 VARIOLA VIRUS  89-123 321-372 496-530 PVB05_VACCC PLAQUE-SIZE/HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN LC16MO) 254-298 PRECURSOR PVB05_VACCL PLAQUE-SIZE/HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 254-298 PRECURSOR PVB05_VACCV PLAQUE-SIZE/HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN LISTER) 254-298 PRECURSOR PVB07_VACCV PLAQUE-SIZE/HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN WR) 254-298 PRECURSOR PVB08_VACCC PROTEIN B7 PRECURSOR VACCINIA VIRUS 28-62 (STRAIN WR), AND (STRAIN COPENHAGEN) PVB08_VACCV PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 26-60 PVB18_VACCC PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAIN WR) 26-60 PVB18_VACCV PROTEIN B18 VACCINIA VIRUS (STRAIN COPENHAGEN) 337-375 491-532 PVB18_VARV PROTEIN B18 VACCINIA VIRUS (STRAIN WR) 337-375 491-532 PVB19_VACCC PROTEIN B18 VACCINIA VIRUS 337-378 491-532 PVB19_VACCD SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN)  87-121 PVB19_VACCV SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN DAIREN I)  85-119 PVB20_VACCC SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN WR)  85-119 PVB21_VACCV PROTEIN B20 VACCINIA VIRUS (STRAIN COPENHAGEN) 48-85 PVBL1_BGMV PROTEIN B21 VACCINIA VIRUS (STRAIN WR) 61-95 PVBL1_SLCV BL1 PROTEIN BEAN GOLDEN MOSAIC VIRUS 159-193 PVBL1_TGMV BL1 PROTEIN SQUASH LEAF CURL VIRUS 159-193 PVBR1_BGMV BL1 PROTEIN TOMATO GOLDEN MOSAIC VIRUS 159-193 PVBR1_SLCV BR1 PROTEIN BEAN GOLDEN MOSAIC VIRUS 172-206 PVBR1_TGMV BR1 PROTEIN SQUASH LEAF CURL VIRUS 20-61 PVC02_VACCC BR1 PROTEIN TOMATO GOLDEN MOSAIC VIRUS 25-59 PVC02_VACCV PROTEIN C2 VACCINIA VIRUS (STRAIN COPENHAGEN) 37-82 262-302 391-442 PVC04_SFVKA PROTEIN C2 VACCINIA VIRUS (STRAIN WR) 37-82 262-302 391-442 PVC04_VACCC PROTEIN C4 SHOPE FIBROMA VIRUS (STRAIN KASZA) 175-223 374-408 PVC04_VACCV PROTEIN C4 VACCINIA VIRUS (STRAIN COPENHAGEN) 12-46 PVC04_VARV PROTEIN C4 VACCINIA VIRUS (STRAIN WR) 12-46 PVC05_SFVKA PROTEIN C4 VARIOLA VIRUS 12-46 PVC05_VACCC HYPOTHETICAL PROTEIN C5 SHOPE FIBROMA VIRUS (STRAIN KASZA)  82-125 PVC05_VACCV PROTEIN C5 VACCINIA VIRUS (STRAIN COPENHAGEN) 31-68 PVC05_VARV PROTEIN C5 VACCINIA VIRUS (STRAIN WR) 31-68 PVC08_SFVKA PROTEIN C5 VARIOLA VIRUS 32-70  73-121 PVC09_SFVKA HYPOTHETICAL PROTEIN C8 SHOPE FIBROMA VIRUS (STRAIN KASZA) 45-86 PVC09_VACCC HYPOTHETICAL PROTEIN C9 SHOPE FIBROMA VIRUS (STRAIN KASZA)  63-106 PVC09_VACCV PROTEIN C9 VACCINIA VIRUS (STRAIN COPENHAGEN)  82-116 168-226 289-325 575-612 PVC10_VACCC PROTEIN C9 VACCINIA VIRUS (STRAIN WR)  82-116 168-226 289-323 575-612 PVC10_VACCV PROTEIN C10 VACCINIA VIRUS (STRAIN COPENHAGEN) 136-180 PVC10_VARV PROTEIN C10 VACCINIA VIRUS (STRAIN WR) 136-176 PVC12_SFVKA PROTEIN C10 VARIOLA VIRUS 136-170 PVC13_SFVKA HYPOTHETICAL PROTEIN C12 SHOPE FIBROMA VIRUS (STRAIN KASZA)  2-36 PVC16_VACCC PROTEIN C13 SHOPE FIBROMA VIRUS (STRAIN KASZA)  3-66 137-182 189-240 PVC17_VACCC PROTEIN C16/B22 VACCINIA VIRUS (STRAIN COPENHAGEN) 142-176 PVC18_VACCC PROTEIN C17/B23 VACCINIA VIRUS (STRAIN COPENHAGEN) 100-155 325-359 PVC19_SFVKA PROTEIN C18/B24 VACCINIA VIRUS (STRAIN COPENHAGEN) 40-98 PVC19_VACCC PROTEIN C19 SHOPE FIBROMA VIRUS (STRAIN KASZA) 56-97 PVCAP_EBV PROTEIN C19/B25 VACCINIA VIRUS (STRAIN COPENHAGEN) 218-252 PVCAP_HCMVA MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 150-184 670-709 PVCAP_HSV11 MAJOR CAPSID PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 136-174 191-225 260-294 PVCAP_HSV6U MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 116-175 308-356 PVCAP_HSVEB MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS 136-174 230-266 311-382 PVCAP_HSVSA MAJOR CAPSID PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 150-184 304-352 PVCAP_PRVIS MAJOR CAPSID PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 479-520 673-714 755-799 PVCAP_VZVD MAJOR CAPSID PROTEIN PSEUDORABIES VIRUS (STRAIN INDIANA S) 105-160 292-326 PVCG3_NPVAC MAJOR CAPSID PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 128-198 316-350 PVD05_FOWP1 DNA-BINDING PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 110-248 POLYHEDROSIS VIRUS PVD05_VACCC 92.6 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 145-181 PVD05_VACCV PROTEIN D5 VACCINIA VIRUS (STRAIN COPENHAGEN) 123-157 PVD05_VARV PROTEIN D5 VACCINIA VIRUS (STRAIN WR) 123-157 PVD09_VACCC PROTEIN D5 VARIOLA VIRUS 123-157 PVD09_VACCV PROTEIN D9 VACCINIA VIRUS (STRAIN COPENHAGEN) 126-160 PVD09_VARV PROTEIN D9 VACCINIA VIRUS (STRAIN WR) 126-160 PVD10_FOWP1 PROTEIN D9 VARIOLA VIRUS 126-160 PVD10_SFVKA PROTEIN D10 FOWLPOX VIRUS (STRAIN FP-1) 65-99 188-222 PVD10_VARV PROTEIN D10 SHOPE FIBROMA VIRUS (STRAIN KASZA)  4-52 PVDBP_CAMVC PROTEIN D10 VARIOLA VIRUS  67-105 PVDBP_CAMVD DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841)  1-35 PVDBP_CAMVE DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H)  1-35 PVDBP_CAMVN DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC)  1-35 PVDBP_CAMVS DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153)  1-35 PVE02_VACCC DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS  1-35 (STRAIN STRASBOURG) PVE02_VACCV PROTEIN E2 VACCINIA VIRUS (STRAIN COPENHAGEN) 282-336 PVE02_VARV PROTEIN E2 VACCINIA VIRUS (STRAIN WR) 282-336 PVE03_VACCC PROTEIN E2 VARIOLA VIRUS 282-336 PVE03_VACCV PROTEIN E3 VACCINIA VIRUS (STRAIN COPENHAGEN) 17-61 PVE03_VARV PROTEIN E3 VACCINIA VIRUS (STRAIN WR) 17-61 PVE05_VACCC PROTEIN E3 VARIOLA VIRUS 17-61 PVE05_VACCD PROTEIN E5 VACCINIA VIRUS (STRAIN COPENHAGEN) 28-93 PVE05_VACCV PROTEIN E5 VACCINIA VIRUS (STRAIN DAIREN 1)  38-103 PVE05_VARV PROTEIN E5 VACCINIA VIRUS (STRAIN WR)  38-103 PVE06_VACCC PROTEIN E5 VARIOLA VIRUS  38-103 PVE06_VACCV PROTEIN E6 VACCINIA VIRUS (STRAIN COPENHAGEN) 105-139 232-266 PVE06_VARV PROTEIN E6 VACCINIA VIRUS (STRAIN WR) 105-139 232-266 PVE18_NPVAC PROTEIN E6 VARIOLA VIRUS 105-139 367-401 PVE1_HPV1A EARLY 18.5 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 112-163 POLYHEDROSIS VIRUS PVE1_HPV31 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 137-171 PVE1_HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 56-90 PVE1_HPV35 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 33-67 133-167 PVE1_HPV39 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 56-90 PVE1_HPV41 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 59-96 PVE1_HPV42 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 55-89 312-346 PVE1_HPV58 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 42 25-87 PVE1_HPV6B E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 33-67 119-174 PVE1_PAPVE E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B 265-299 PVE26_NPVAC E1 PROTEIN EUROPEAN ELK PAPILLOMAVIRUS 176-210 PVE2_CRPVK EARLY 25.9 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR  72-117 POLYHEDROSIS VIRUS PVE2_HPV05 PROBABLE E2 PROTEIN COTTONTAIL RABBIT (SHOPE)  3-44 PAPILLOMAVIRUS (STRAIN KANS PVE2_HPV08 PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5  5-57 276-310 342-383 437-471 PVE2_HPV16 PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8  5-55 148-182 PVE2_HPV18 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 16  61-105 315-349 PVE2_HPV1A E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18  65-100 PVE2_HPV2A E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A  3-37 159-193 PVE2_HPV31 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 2A 13-47 159-193 PVE2_HPV33 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31  61-105 PVE2_HPV35 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33  63-101 297-331 PVE2_HPV39 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35  62-106 158-192 PVE2_HPV41 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39  74-110 323-357 PVE2_HPV47 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41  6-54 PVE2_HPV51 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47  5-55 148-182 PVE2_HPV57 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 154-191 PVE2_HPV58 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57 13-47 179-213 PVE2_HPV5B E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58  2-36 PVE2_PAPVD PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B  5-57 PVE2_PAPVE PROBABLE E2 PROTEIN DEER PAPILLOMAVIRUS 107-141 PVE2_PCPV1 PROBABLE E2 PROTEIN EUROPEAN ELK PAPILLOMAVIRUS 113-150 PVE2_RHPV1 E2 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS TYPE 1 318-361 PVE39_NPVAC E2 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1  62-106 307-341 PVE39_NPVOP EARLY 39 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 20-57 POLYHEDROSIS VIRUS PVE4_HPV18 EARLY 39 KD PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 119-156 POLYHEDROSIS VIRUS PVE4_HPV41 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 42-86 PVE5_HPV5B PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 63-97 PVEF_GVTN PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B  3-40  96-130 PVENV_BEV VIRAL ENHANCING FACTOR (VEF) TRICHOPLUSIA N1 GRANULOSIS VIRUS (TNGV) 681-719 (104 KD GLYCOP PVENV_DHVI1 ENVELOPE PROTEIN BERNE VIRUS (BEV) 195-229 PVENV_MCV1 ENVELOPE GLYCOPROTEIN PRECURSOR DHORI VIRUS (STRAIN INDIAN/1313/61) (DHO) 318-366 PVENV_MCV2 MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOSUM VIRUS SUBTYPE 1 252-286 (43 KD PROTEIN) (P43K) (MCVI) PVENV_THOGV MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOSUM VIRUS SUBTYPE 2 252-286 (43 KD PROTEIN) (P43K) (MCVII) PVENV_VACCC ENVELOPE GLYCOPROTEIN PRECURSOR THOGOTO VIRUS (THO) 313-354 (SURFACE PVENV_VACCI MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 257-295 (37 KD PROTEIN) (P37K) PVENV_VACCP MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN 1HD-J) 257-295 (37 KD PROTEIN) (P37K) PVENV_VACCV MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN L-IVP) 257-295 (37 KD PROTEIN) (P37K) PVENV_VARV MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN WR) 257-295 (37 KD PROTEIN) (P37K) PVETS_NPVAC MAJOR ENVELOPE PROTEIN VARIOLA VIRUS 257-295 (37 KD PROTEIN) (P37K) PVF01_VACCC ECORJ-T SITE PROTEIN ETS AUTOGRAPHA CALIFORNICA NUCLEAR  1-53 POLYHEDROSIS VIRUS ( PVF01_VACCV PROTEIN F1 VACCINIA VIRUS (STRAIN COPENHAGEN), 46-80 124-158 AND VACCINIA VIRUS PVF03_VACCC PROTEIN F1 (FRAGMENT) VACCINIA VIRUS (STRAIN WR) 46-80 124-158 PVF03_VACCV PROTEIN F3 VACCINIA VIRUS (STRAIN COPENHAGEN)  71-110 PVF05_VACCC PROTEIN F3 VACCINIA VIRUS (STRAIN WR)  71-110 PVF05_VACCP 36 KD MAJOR MEMBRANE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  81-129 282-320 PRECURSOR PVF05_VACCV 36 KD MAJOR MEMBRANE PROTEIN VACCINIA VIRUS (STRAIN L-IVP)  81-129 282-320 PRECURSOR PVF05_VARV 36 KD MAJOR MEMBRANE PROTEIN VACCINIA VIRUS (STRAIN WR)  81-129 283-321 PRECURSOR PVF06_VARV 36 KD MAJOR MEMBRANE PROTEIN VARIOLA VIRUS  81-122 281-322 PRECURSOR PVF11_VACCC PROTEIN F6 VARIOLA VIRUS  8-44 PVF11_VACCP PROTEIN F11 VACCINIA VIRUS (STRAIN COPENHAGEN) 217-258 269-315 PVF11_VARV PROTEIN F11 VACCINIA VIRUS (STRAIN L-IVP) 213-254 265-311 PVF12_VACCC PROTEIN F11 VARIOLA VIRUS 41-75 269-315 PVF12_VACCP PROTEIN F12 VACCINIA VIRUS (STRAIN COPENHAGEN)  1-67 102-143 199-236 350-388 544-581 PVF12_VARV PROTEIN F12 VACCINIA VIRUS (STRAIN L-IVP)  1-67 102-143 199-236 350-388 544-581 PVF16_VACCC PROTEIN F12 VARIOLA VIRUS  1-67 199-236 350-388 547-581 PVF16_VACCP PROTEIN F16 VACCINIA VIRUS (STRAIN COPENHAGEN) 155-194 PVF16_VARV PROTEIN F16 VACCINIA VIRUS (STRAIN L-IVP) 155-194 PVFP3_FOWPV PROTEIN F16 VARIOLA VIRUS 155-194 PVFP4_FOWPV PROTEIN FP3 FOWLPOX VIRUS  1-43 PVFP7_FOWPV PROTEIN FP4 FOWLPOX VIRUS 139-173 239-273 PVFPL_FOWP1 PROTEIN FP7 FOWLPOX VIRUS 23-57 PVFUS_VACCC FPLEFT PROTEIN (FRAGMENT) FOWLPOX VIRUS (STRAIN FP-1)  77-111 PVFUS_VACCV 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 30-64 PVG01_HSVI1 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAIN WR) 30-64 PVG01_VACCC HYPOTHETICAL GENE 1 PROTEIN ICTALURID HERPESVIRUS 1 271-306 512-563 591-647 730-764 (CHANNEL CATFISH VIRUS) (CCV) PVG01_VACCV PROTEIN G1 VACCINIA VIRUS (STRAIN COPENHAGEN) 301-339 PVG01_VARV PROTEIN G1 (FRAGMENT) VACCINIA VIRUS (STRAIN WR) 240-278 PVG03_HSVEB PROTEIN G1 VARIOLA VIRUS 301-339 PVG03_HSVEK GENE 3 PROTEIN EQUINE HERPESVIRUS TYPE 1 143-177 (STRAIN AB4P) (EHV-1) PVG03_VARV GENE 3 PROTEIN (ORF L1) EQUINE HERPESVIRUS TYPE 1 143-177 (STRAIN KENTUCKY A) (EHV-1) PVG05_VACCC PROTEIN G3 VARIOLA VIRUS 64-98 PVG05_VARV PROTEIN G5 VACCINIA VIRUS (STRAIN COPENHAGEN) 117-158 255-289 355-389 PVG06_HSVI1 PROTEIN G5 VARIOLA VIRUS 117-158 255-289 355-389 PVG07_HSVI1 HYPOTHETICAL GENE 6 MEMBRANE ICTALURID HERPESVIRUS 1  61-109 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG07_VACCC HYPOTHETICAL GENE 7 MEMBRANE ICTALURID HERPESVIRUS 1  69-103 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG07_VARV PROTEIN G7 VACCINIA VIRUS (STRAIN COPENHAGEN) 114-175 324-358 PVG09_VACCC PROTEIN G7 VARIOLA VIRUS 114-175 324-358 PVG09_VACCV PROTEIN F1 (PROTEIN G9) VACCINIA VIRUS (STRAIN COPENHAGEN) 304-338 PVG09_VARV PROTEIN F1 (PROTEIN G9) VACCINIA VIRUS (STRAIN WR) 304-338 (FRAGMENT) PVG10_HSVI1 PROTEIN F1 (PROTEIN G9) VARIOLA VIRUS 304-338 PVG12_SPV1R HYPOTHETICAL GENE 10 MEMBRANE ICTALURID HERPESVIRUS 1 63-97 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG16_HSVSA GENE 12 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 11-45 PVG17_HSVI1 HYPOTHETICAL GENE 16 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 58-95 PVG18_HSVI1 HYPOTHETICAL GENE 17 PROTEIN ICTALURID HERPESVIRUS 1  92-129 177-211 (CHANNEL CATFISH VIRUS) (CCV) PVG1L_AMEPV HYPOTHETICAL GENE 18 PROTEIN ICTALURID HERPESVIRUS 1 174-208 215-256 (CHANNEL CATFISH VIRUS) (CCV) PVG1_SPV1R G1L PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 407-441 PVG1_SPV4 CAPSID PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 136-170 256-297 320-357 PVG22_HSVI1 CAPSID PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 287-321 PVG24_HSVI1 HYPOTHETICAL GENE 22 PROTEIN ICTALURID HERPESVIRUS 1 117-158 437-629 660-892 899- (CHANNEL CATFISH VIRUS) (CCV) 1055 PVG27_HSVI1 HYPOTHETICAL GENE 24 PROTEIN ICTALURID HERPESVIRUS 1  7-72  74-108 (CHANNEL CATFISH VIRUS) (CCV) PVG28_HSVI1 HYPOTHETICAL GENE 27 PROTEIN ICTALURID HERPESVIRUS 1 164-219 (CHANNEL CATFISH VIRUS) (CCV) PVG2R_AMEPV HYPOTHETICAL GENE 28 PROTEIN ICTALURID HERPESVIRUS 1 253-290 (CHANNEL CATFISH VIRUS) (CCV) PVG2_SPV1R HYPOTHETICAL G2R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 29-63 184-218 PVG2_SPV4 GENE 2 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 222-256 285-326 PVG33_HSVI1 GENE 2 PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 255-310 PVG34_HSVI1 HYPOTHETICAL GENE 33 PROTEIN ICTALURID HERPESVIRUS 1 149-183 (CHANNEL CATFISH VIRUS) (CCV) PVG35_HSVI1 HYPOTHETICAL GENE 34 PROTEIN ICTALURID HERPESVIRUS 1 345-379 (CHANNEL CATFISH VIRUS) (CCV) PVG37_HSVI1 HYPOTHETICAL GENE 35 PROTEIN ICTALURID HERPESVIRUS 1 17-90 (CHANNEL CATFISH VIRUS) (CCV) PVG38_HSVI1 HYPOTHETICAL GENE 37 PROTEIN ICTALURID HERPESVIRUS 1 435-472 (CHANNEL CATFISH VIRUS) (CCV) PVG39_HSVI1 HYPOTHETICAL GENE 38 PROTEIN ICTALURID HERPESVIRUS 1  84-118 (CHANNEL CATFISH VIRUS) (CCV) PVG3_SPV1R HYPOTHETICAL GENE 39 PROTEIN ICTALURID HERPESVIRUS 1 124-158 266-300 (CHANNEL CATFISH VIRUS) (CCV) PVG3_SPV4 GENE 3 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B  8-49 162-196 203-244 PVG43_HSVI1 GENE 3 PROTEIN SPIROPLASMA VIRUS 4 (SPV4)  6-54  87-121 PVG45_HSVSA HYPOTHETICAL GENE 43 PROTEIN ICTALURID HERPESVIRUS 1 116-150 262-296 324-361 643-677 (CHANNEL CATFISH VIRUS) (CCV) PVG46_HSVI1 HYPOTHETICAL GENE 45 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 121-162 PVG48_HSVI1 PROBABLE MAJOR GLYCOPROTEIN ICTALURID HERPESVIRUS 1 45-86 939- 1251- (CHANNEL CATFISH VIRUS) (CCV) 1078 1321 PVG48_HSVSA HYPOTHETICAL GENE 48 PROTEIN ICTALURID HERPESVIRUS 1 169-207 (CHANNEL CATFISH VIRUS) (CCV) PVG49_HSVSA HYPOTHETICAL GENE 48 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 360-417 611-666 733-767 PVG4R_AMEPV HYPOTHETICAL GENE 49 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  68-102 PVG4_SPV4 G4R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV)  4-38 PVG51_HSVI1 GENE 4 PROTEIN SPIROPLASMA VIRUS 4 (SPV4)  89-130 PVG51_HSVSA HYPOTHETICAL GENE 51 MEMBRANE ICTALURID HERPESVIRUS 1 34-73  89-123 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG53_HSVI1 GENE 51 GLYCOPROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 29-70 123-157 162-196 PVG54_HSVI1 HYPOTHETICAL GENE 53 PROTEIN ICTALURID HERPESVIRUS 1  67-127 (CHANNEL CATFISH VIRUS) (CCV) PVG55_HSVI1 HYPOTHETICAL GENE 54 PROTEIN ICTALURID HERPESVIRUS 1 355-396 (CHANNEL CATFISH VIRUS) (CCV) PVG55_HSVSA HYPOTHETICAL GENE 55 PROTEIN ICTALURID HERPESVIRUS 1 101-135 (CHANNEL CATFISH VIRUS) (CCV) PVG56_HSVI1 HYPOTHETICAL GENE 55 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 126-178 PVG59_HSVI1 HYPOTHETICAL GENE 56 PROTEIN ICTALURID HERPESVIRUS 1 151-192 578-612 644-678 750-784 846-880 1111- (CHANNEL CATFISH VIRUS) (CCV) 1145 PVG59_HSVSA HYPOTHETICAL GENE 59 MEMBRANE ICTALURID HERPESVIRUS 1 10-72  89-123 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG5_SPV1R GENE 59 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 169-209 PVG61_HSVI1 GENE 5 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B  65-103 PVG63_HSVI1 HYPOTHETICAL GENE 61 PROTEIN ICTALURID HERPESVIRUS 1 265-299 (CHANNEL CATFISH VIRUS) (CCV) PVG65_HSVI1 HYPOTHETICAL GENE 63 PROTEIN ICTALURID HERPESVIRUS 1 546-584 (CHANNEL CATFISH VIRUS) (CCV) PVG66_HSVI1 HYPOTHETICAL GENE 65 PROTEIN ICTALURID HERPESVIRUS 1 805-839 1213- (CHANNEL CATFISH VIRUS) (CCV) 1254 PVG67_HSVI1 HYPOTHETICAL GENE 66 PROTEIN ICTALURID HERPESVIRUS 1 154-188 328-410 (CHANNEL CATFISH VIRUS) (CCV) PVG68_HSVI1 HYPOTHETICAL GENE 67 PROTEIN ICTALURID HERPESVIRUS 1 379-413 501-546 1321- 1478- (CHANNEL CATFISH VIRUS) (CCV) 1369 1541 PVG72_HSVI1 HYPOTHETICAL GENE 68 PROTEIN ICTALURID HERPESVIRUS 1 245-288 (CHANNEL CATFISH VIRUS) (CCV) PVG75_HSVI1 HYPOTHETICAL GENE 72 PROTEIN ICTALURID HERPESVIRUS 1 447-484 723-757 912-949 (CHANNEL CATFISH VIRUS) (CCV) PVG8_SPV1R HYPOTHETICAL GENE 75 PROTEIN ICTALURID HERPESVIRUS 1 217-305 388-422 (CHANNEL CATFISH VIRUS) (CCV) PVGF1_1BVB GENE 8 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B  5-51 PVGH3_HCMVA F1 PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 142-179 1233- 2119- 3388- 3475- 3517- 3761- (STRAIN BEAUDETTE) (I 1267 2156 3424 3513 3556 3795 PVGL1_CVPR8 GLYCOPROTEIN H301 PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) PVGL2_CVBF E1 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 212-257 (MATRIX GLYCOP (STRAIN 86/137004/BRI PVGL2_CVBL9 E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN F15 642-676 850-885  993- 1263- (SPIKE GLYCOPRO 1088 1305 PVGL2_CVBLY E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN L9) 850-885  993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2_CVBM E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN LY-138) 642-676 850-885  993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2_CVBQ E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS 642-676 850-885  993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2_CVBV E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN QUEBEC) 642-676 850-885  993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2_CVH22 E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN VACCINE) 642-676 850-885  993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2_CVM4 E2 GLYCOPROTEIN PRECURSOR HUMAN CORONAVIRUS (STRAIN 229E) 770-916 1055- (SPIKE GLYCOPRO 1112 PVGL2_CVMA5 E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV 643-684 1001- 1270- (SPIKE GLYCOPRO (STRAIN WILD TYPE 4) (MHV-4) 1117 1315 PVGL2_CVMJC E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV 591-632  949- 1218- (SPIKE GLYCOPRO (STRAIN A59) 1079 1263 PVGL2_CVMJH E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV 643-684 1001- 1270- (SPIKE GLYCOPRO (STRAIN JHMV/VARIANT CL-2) 1117 1315 PVGL2_CVPFS E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV 503-543 860-976 1129- (SPIKE GLYCOPRO (STRAIN JHM) 1174 PVGL2_CVPMI E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS  69-110 448-482 692-733 889-923 1040- 1352- (SPIKE GLYCOPRO CORONAVIRUS (S 1186 1389 PVGL2_CVPPR E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS  69-110 448-482 692-733 889-923 1040- 1352- (SPIKE GLYCOPRO CORONAVIRUS (S 1186 1389 PVGL2_CVPPU E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS  70-110 446-480 690-731 887-921 1038- 1350- (SPIKE GLYCOPRO CORONAVIRUS (S 1184 1387 PVGL2_CVPR8 E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS  69-110 446-480 690-731 887-921 1038- 1350- (SPIKE GLYCOPRO CORONAVIRUS (S 1184 1387 PVGL2_CVPRM E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 224-258 468-509 665-699 816-962 1128- (SPIKE GLYCOPRO (STRAIN 86/1370004/BRIT 1165 PVGL2_CVPRT E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 224-258 468-509 665-699 816-962 1128- (SPIKE GLYCOPRO (STRAIN RM4) (PRCV) 1165 PVGL2_EBV E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS  69-110 446-480 690-731 887-921 1038- 1350- (SPIKE GLYCOPRO CORONAVIRUS (S 1184 1387 PVGL2_FIPV PROBABLE MEMBRANE GLYCOPROTEIN  68-102 PVGL2_IBV6 E2 GLYCOPROTEIN PRECURSOR FELINE INFECTIOUS PERITONITIS VIRUS 189-245 451-485 695-736 892-926 1043- 1355- (STRAIN 79-1146) 1189 1392 PVGL2_IBVB E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 791-905 1057- (STRAIN 6/82) 1091 PVGL2_IBVD2 E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 437-478 772-904 1056- (STRAIN BEAUDETTE) 1090 PVGL2_IBVK E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 773-905 1057- (STRAIN D274) 1091 PVGL2_IBVM E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 437-478 772-904 1056- (STRAIN KB8523) 1090 PVGLB_HCMVA E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 437-478 772-904 1056- (STRAIN M41) 1090 PVGLB_HCMVT GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 43-88 128-162 436-484 844-878 PVGLB_HSV11 GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 22-88 128-162 437-478 451-485 845-879 PVGLB_HSV1F GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 828-890 PVGLB_HSV1K GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F)] 827-889 PVGLB_HSV1P GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 827-889 PVGLB_HSV23 GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS 828-890 (TYPE 1/STRAIN PATTON) PVGLB_HSV2H GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 333) 828-890 PVGLB_HSV2S GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 828-890 PVGLB_HSV6U GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN SA8) 817-871 PVGLB_HSVB1 GLYCOPROTEIN B HERPES SIMPLEX VIRUS 37-71 185-223 (TYPE 6/STRAIN UGANDA-1102) PVGLB_HSVB2 GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUS TYPE 1 859-913 PVGLB_HSVBC GLYCOPROTEIN B-1 PRECURSOR BOVINE HERPESVIRUS TYPE 2 (STRAIN BMV) 440-474 848-902 PVGLB_HSVE1 GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN COOPER) 863-900 PVGLB_HSVE4 GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (ISOLATE HVS25A) 542-576 911-961 PVGLB_HSVEA GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 474-515 847-900 PVGLB_HSVEB GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB1) 542-576 911-961 PVGLB_HSVEL GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 542-576 911-961 PVGLB_HSVMD GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 542-576 910-960 (STRAIN KENTUCKY D) PVGLB_HSVSA GLYCOPROTEIN B PRECURSOR MAREK'S DISEASE HERPESVIRUS 390-435 649-683 787-845 (STRAIN RB-1B) PVGLB_MCMVS GLYCOPROTEIN B PRECURSOR HERPESVIRUS SAIMIRI (STRAIN 11) 240-288 406-447 PVGLB_PRVIF GLYCOPROTEIN B PRECURSOR MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 206-260 427-475 693-734 744-778 860-894 PVGLB_VZVD GLYCOPROTEIN GII PRECURSOR PSEUDORABIES VIRUS 847-881 (STRAIN INDIANA-FUNKHAUSER/BECKE PVGLC_HSV11 GLYCOPROTEIN B PRECURSOR VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)  92-133 596-630 809-867 PVGLC_HSV1K GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 469-510 PVGLC_HSV2 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 469-510 PVGLC_HSV23 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2) 442-476 PVGLC_HSVBC GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 333) 443-477 PVGLC_HSVEB GLYCOPROTEIN GIII PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN COOPER) 235-269 PVGLC_HSVMB GLYCOPROTEIN C PRECURSOR EQUINE HERPESVIRUS TYPE 1 182-218 (STRAIN AB4P) AND (STRAIN KEN PVGLC_HSVMD SECRETORY GLYCOPROTEIN GP57-65 MAREK'S DISEASE HERPESVIRUS 63-97 PRECURSOR (STRAIN BC-1) PVGLC_HSVMG SECRETORY GLYCOPROTEIN GP57-65 MAREK'S DISEASE HERPESVIRUS 63-97 PRECURSOR (STRAIN RB-1B) PVGLC_HSVMM SECRETORY GLYCOPROTEIN GP57-65 MAREK'S DISEASE HERPESVIRUS 62-96 PRECURSOR (STRAIN GA) PVGLC_PRVIF SECRETORY GLYCOPROTEIN GP57-65 MAREK'S DISEASE HERPESVIRUS 63-97 PRECURSOR (STRAIN MD5) PVGLC_VZVD GLYCOPROTEIN G111 PRECURSOR PSEUDORABIES VIRUS 183-235 (STRAIN INDIANA-FUNKHAUSER/BECKE PVGLC_VZVS GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 280-321 PVGLD_HSVEA GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN SCOTT) 280-321 PVGLD_HSVEB GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1  89-123 (STRAIN AB1) PVGLD_HSVEK GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 139-173 (STRAIN AB4P) AND (STRAIN KEN PVGLE_HSV11 GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 139-173 (STRAIN KENTUCKY A) PVGLE_HSV2 GLYCOPROTEIN E PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 111-145 PVGLF_BRSVA GLYCOPROTEIN E PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2) 111-159 PVGLF_BRSVC FUSION GLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIAL VIRUS 146-202 504-545 (STRAIN A51908) PVGLF_BRSVR FUSION GLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIAL VIRUS 146-202 267-302 506-547 (STRAIN COPENHAGE PVGLF_CDVO FUSION GLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIAL VIRUS 146-202 267-302 506-554 (STRAIN RB94) PVGLF_HRSVI FUSION GLYCOPROTEIN PRECURSOR CANINE DISTEMPER VIRUS 228-297 340-381 568-602 (STRAIN ONDERSTEPOORT) PVGLF_HRSVA FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIAL VIRUS 116-203 267-302 506-549 (SUBGROUP B/STRAI PVGLF_HRSVL FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIAL VIRUS 116-202 267-302 506-549 (STRAIN A2 PVGLF_HRSVR FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIAL VIRUS 116-202 267-302 506-547 (SUBGROUP A/STRAI PVGLF_MEASE FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIAL VIRUS 116-202 267-302 506-549 (STRAIN RSS-2) PVGLF_MEASI FUSION GLYCOPROTEIN PRECURSOR MEASLES VIRUS 116-184 228-269 452-500 (STRAIN EDMONSTON) AND (STRAIN HALLE) PVGLF_MEASY FUSION GLYCOPROTEIN PRECURSOR MEASLES VIRUS (STRAIN IP-3-CA) 119-187 231-272 455-503 PVGLF_MUMP1 FUSION GLYCOPROTEIN PRECURSOR MEASLES VIRUS (STRAIN YAMAGATA-1) 116-184 228-269 452-500 PVGLF_MUMPM FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN SBL-1) 20-54 103-179 235-272 447-502 PVGLF_MUMPR FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 20-54 103-179 235-272 447-502 PVGLF_MUMPS FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN RW) 20-54 103-179 235-272 447-502 PVGLF_NDVA FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN SBL) 20-54 103-179 235-272 447-502 PVGLF_NDVB FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272 426-512 (STRAIN AUSTRALIA-VICTORIA/32) PVGLF_NDVH3 FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272 426-517 (STRAIN BEAUDETTE C/45) PVGLF_NDVH4 FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272 426-517 (STRAIN HER/33) PVGLF_NDVI FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272 426-517 (STRAIN B1-HITCHNER/47) PVGLF_NDVL FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 133-182 238-272 426-517 (STRAIN ITALIEN/45) PVGLF_NDVM FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 133-182 231-272 426-517 (STRAIN LAS/46) PVGLF_NDVQ FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272 426-512 (STRAIN MIYADERA/51) PVGLF_NDVT FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272 433-512 (STRAIN QUEENSLAND/66) PVGLF_NDVTG FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272 426-517 (STRAIN TEXAS) PVGLF_NDVU FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272 426-517 (STRAIN TEXAS G.B./48) PVGLF_PHODV FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272 426-512 (STRAIN ULSTER/67) PVGLF_PI1HC FUSION GLYCOPROTEIN PRECURSOR PHOCINE DISTEMPER VIRUS 29-63 197-266 309-350 533-581 PVGLF_PI2H FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 1 VIRUS 123-174 207-267 459-503 (STRAIN C39) PVGLF_PI2HG FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 2 VIRUS  93-183 477-528 PVGLF_PI2HT FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 2 VIRUS  93-183 477-528 (STRAIN GREER) PVGLF_PI3B FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 2 VIRUS  93-185 477-528 (STRAIN TOSHIBA) PVGLF_PI3H4 FUSION GLYCOPROTEIN PRECURSOR BOVINE PARAINFLUENZA 3 VIRUS 117-182 207-241 456-518 PVGLF_RINDK FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 3 VIRUS 117-182 207-241 462-532 (STRAIN NIH 47885) PVGLF_RINDL FUSION GLYCOPROTEIN PRECURSOR RINDERPEST VIRUS 112-180 224-265 448-493 (STRAIN KABETE O) PVGLF_SEND5 FUSION GLYCOPROTEIN PRECURSOR RINDERPEST VIRUS 112-180 224-265 448-506 (STRAIN L) PVGLF_SENDF FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 127-188 211-271 463-533 PVGLF_SENDH FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN FUSHIMI) 127-188 211-271 463-533 PVGLF_SENDJ FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN HARRIS) 127-188 218-271 463-533 PVGLF_SENDZ FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN HVJ) 177-188 211-271 463-533 PVGLF_SV41 FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN Z) 127-188 211-271 463-533 PVGLF_SV5 FUSION GLYCOPROTEIN PRECURSOR SIMIAN VIRUS 41  96-186 454-508 PVGLF_TRTV FUSION GLYCOPROTEIN PRECURSOR SIMIAN VIRUS (STRAIN W3) 103-171 241-275 451-487 PVGLG_BEFV FUSION GLYCOPROTEIN PRECURSOR TURKEY RHINOTRACHEITIS VIRUS ( 105-161 190-224 457-498 PVGLG_BRSVC SPIKE GLYCOPROTEIN PRECURSOR BOVINE EPHEMERAL FEVER VIRUS 506-612 PVGLG_HRSV1 MAJOR SURFACE GLYCOPROTEIN G BOVINE RESPIRATORY SYNCYTIAL VIRUS 30-70 104-138 (STRAIN COPENHAGE PVGLG_HRSV2 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-81 (SUBGROUP B/STRAI PVGLG_HRSV3 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB642 PVGLG_HRSV4 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB1734 PVGLG_HRSV5 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS  30-107 (STRAIN RSB5857) PVGLG_HRSV6 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB6190) PVGLG_HRSV7 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB6256) PVGLG_HRSV8 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB6614) PVGLG_HRSVA MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-81 (SUBGROUP B/STRAI PVGLG_HRSVL MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-67 (STRAIN A2) PVGLG_HSVE4 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 25-85 (SUBGROUP A/STRAI PVGLG_SIGMA GLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 271-305 PVGLG_SYNV SPIKE GLYCOPROTEIN PRECURSOR SIGMA VIRUS 344-381 464-498 PVGLG_VHSV0 SPIKE GLYCOPROTEIN PRECURSOR SONCHUS YELLOW NET VIRUS 488-523 PVGLG_VSVIG SPIKE GLYCOPROTEIN PRECURSOR VIRAL HEMORRHAGIC SEPTICEMIA VIRUS 363-397 (STRAIN 07-71) PVGLH_EBV SPIKE GLYCOPROTEIN PRECURSOR VESICULAR STOMATITIS VIRUS 476-510 (SEROTYPE INDIANA/STRAIN G PVGLH_HCMVA GLYCOPROTEIN GP85 PRECURSOR EPSTEIN-BARR VIRUS (STRAIN B95-8) 53-87 160-201 336-380 653-694 PVGLH_HCMVT GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 103-137 270-311 693-741 PVGLH_HSV11 GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 102-136 692-740 PVGLH_HSV1E GLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 447-481 PVGLH_HSV6G GLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN HFEM) 447-481 PVGLH_HSVBC GLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 357-406 PVGLH_HSVE4 GLYCOPROTEIN H PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN COOPER) 364-416 PVGLH_HSVEB GLYCOPROTEIN H PRECURSOR EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 334-379 414-455 PVGLH_HSVSA GLYCOPROTEIN H PRECURSOR EQUINE HERPESVIRUS TYPE 1 327-372 407-448 (STRAIN AB4P) AND (ISOLATE HV PVGLH_MCMVS GLYCOPROTEIN H PRECURSOR HERPESVIRUS SAIMIRI (STRAIN 11) 32-66 374-453 664-712 PVGLH_PRVKA GLYCOPROTEIN H PRECURSOR MURINE CYTOMEGALOVIRUS (STRAIN SMITH 440-474 PVGLH_PRVN3 GLYCOPROTEIN H PRECURSOR PSEUDORABIES VIRUS (STRAIN KAPLAN) 226-260 PVGLH_PRVRI GLYCOPROTEIN H PRECURSOR PSEUDORABIES VIRUS (STRAIN NIA-3) 226-260 PVGLH_VZVD GLYCOPROTEIN H PRECURSOR PSEUDORABIES VIRUS (STRAIN RICE) 226-260 PVGLI_HCMVA PROBABLE GLYCOPROTEIN H PRECURSOR VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 455-506 PVGLM_BUNGE IMMEDIATE EARLY GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  47-111 323-359 PRECURSOR PVGLM_BUNL7 M POLYPROTEIN PRECURSOR BUNYAVIRUS GERMISTON 512-567 685-737 1228- 1262 PVGLM_BUNSH M POLYPROTEIN PRECURSOR BUNYAVIRUS LA CROSSE (ISOLATE L74) 643-677 916-950 PVGLM_BUNYW M POLYPROTEIN PRECURSOR BUNYAVIRUS SNOWSHOW HARE 643-677 PVGLM_DUGBV M POLYPROTEIN PRECURSOR BUNYAMWERA VIRUS 340-374 504-563 905-939 PVGLM_HANTB M POLYPROTEIN PRECURSOR DUGBE VIRUS 937-989 1239- 1300 PVGLM_HANTH M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN B-1) 693-727 PVGLM_HANTL M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN HOJO)  72-106 PVGLM_HANTV M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN LEE)  72-106 PVGLM_INSV M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN 76-118)  72-106 PVGLM_PHV M POLYPROTEIN PRECURSOR IMPATIENS NECROTIC SPOT VIRUS 1067- 1101 PVGLM_PTPV M POLYPROTEIN PRECURSOR PROSPECT HILL VIRUS  73-111 PVGLM_SEOU8 M POLYPROTEIN PRECURSOR PUNTA TORO PHLEBOVIRUS 149-251 PVGLM_SEOUR M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN 80-39) 693-727 PVGLM_SEOUS M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN R22) 694-728 PVGLN_BEFV M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN SR-11) 693-730 PVGLP_BEV NONSTRUCTURAL GLYCOPROTEIN BOVINE EPHEMERAL FEVER VIRUS 377-414 513-569 GNS PRECURSO PVGLX_PRVRI PEPLOMER GLYCOPROTEIN PRECURSOR BERNE VIRUS 43-82  90-124 622-656 1128- 1236 PVGLY_JUNIN SECRETED GLYCOPROTEIN GX PSEUDORABIES VIRUS (STRAIN RICE) 420-461 PVGLY_LASSG GLYCOPROTEIN POLYPROTEIN PRECURSOR JUNIN ARENAVIRUS 301-349 PVGLY_LASSJ GLYCOPROTEIN POLYPROTEIN PRECURSOR LASSA VIRUS (STRAIN GA391) 317-360 388-422 PVGLY_LYCVA GLYCOPROTEIN POLYPROTEIN PRECURSOR LASSA VIRUS (STRAIN JOSIAH) 318-361 389-423 PVGLY_LYCVW GLYCOPROTEIN POLYPROTEIN PRECURSOR LYMPHOCYTIC CHORIOMENINGITIS VIRUS 333-367 395-432 (STRAIN ARMSTRON PVGLY_MOPEI GLYCOPROTEIN POLYPROTEIN PRECURSOR LYMPHOCYTIC CHORIOMENINGITIS VIRUS 124-158 333-367 395-432 (STRAIN WE) PVGLY_PIARV GLYCOPROTEIN POLYPROTEIN PRECURSOR MOPEIA VIRUS 316-359 PVGLY_TACV GLYCOPROTEIN POLYPROTEIN PRECURSOR PICHINDE ARENAVIRUS 334-375 PVGLY_TACV5 GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS 315-363 PVGLY_TACV7 GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS (STRAIN V5) 303-351 382-416 PVGLY_TACVT GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS (STRAIN V7) 302-350 381-415 PVGNB_CPMV GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS (STRAIN TRVL 11598) 303-351 382-416 PVGNM_CPMV GENOME POLYPROTEIN B COWPEA MOSAIC VIRUS 835-869 PVGNM_CPSMV GENOME POLYPROTEIN M COWPEA MOSAIC VIRUS 160-201 PVGNM_RCMV GENOME POLYPROTEIN M COWPEA SEVERE MOSAIC VIRUS (STRAIN DG) 192-226 758-792 874-915 PVGP8_EBV GENOME POLYPROTEIN M RED CLOVER MOTTLE VIRUS 837-871 912-946 PVGP_EBOV PROBABLE MEMBRANE ANTIGEN GP85 EPSTEIN-BARR VIRUS (STRAIN B95-8)  94-149 PVGP_MABVM STRUCTURAL GLYCOPROTEIN PRECURSOR EBOLA VIRUS 280-321 334-368 469-503 PVGP_MABVP STRUCTURAL GLYCOPROTEIN PRECURSOR MARBURG VIRUS (STRAIN MUSOKE) 562-596 PVH02_VACCC STRUCTURAL GLYCOPROTEIN PRECURSOR MARBURG VIRUS (STRAIN POPP) 562-596 PVH02_VACCV LATE PROTEIN H2 VACCINIA VIRUS (STRAIN COPENHAGEN) 58-92 PVH02_VARV LATE PROTEIN H2 VACCINIA VIRUS (STRAIN WR) 58-94 PVH05_VACCC LATE PROTEIN H2 VARIOLA VIRUS 58-92 PVH05_VACCV PROTEIN H5 VACCINIA VIRUS (STRAIN COPENHAGEN) 118-185 PVH05_VARV PROTEIN H5 VACCINIA VIRUS (STRAIN WR) 118-185 PVHEL_LSV PROTEIN H5 VARIOLA VIRUS 136-203 PVHRP_VACCC PROBABLE HELICASE LILY SYMPTOMLESS VIRUS 126-160 PVHRP_VACCV HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 216-279 PVI03_VACCC HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN WR) 216-279 PVI03_VACCV PROTEIN I3 VACCINIA VIRUS (STRAIN COPENHAGEN) 150-193 210-244 PVI03_VARV PROTEIN I3 VACCINIA VIRUS (STRAIN WR) 150-193 210-244 PVI06_VACCV PROTEIN I3 VARIOLA VIRUS 150-193 210-244 PVI06_VARV PROTEIN I6 VACCINIA VIRUS (STRAIN WR) 58-92 PVI07_VARV PROTEIN I6 VARIOLA VIRUS 58-92 PVI08_VACCC PROTEIN I7 VARIOLA VIRUS 373-407 PVI08_VACCV PUTATIVE RNA HELICASE I8 VACCINIA VIRUS (STRAIN COPENHAGEN) 548-589 PVI08_VARV PUTATIVE RNA HELICASE I8 VACCINIA VIRUS (STRAIN WR) 548-589 PVIE1_HCMVA PUTATIVE RNA HELICASE I8 VARIOLA VIRUS 548-589 PVIE1_HCMVT 55 KD IMMEDIATE-EARLY PROTEIN 1 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  78-112 171-205 368-402 416-450 PVIE1_MCMVS 55 KD IMMEDIATE-EARLY PROTEIN 1 HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE)  78-112 171-205 368-402 416-450 PVIE2_NPVOP IMMEDIATE-EARLY PROTEIN 1 MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 244-297 PVIEN_NPVAC IMMEDIATE-EARLY PROTEIN IE-2 ORGYIA PSEUDOTSUGATA MULTICAPSID  94-128 305-395 POLYHEDROSIS VIRUS PVIF_CAEVC IMMEDIATE-EARLY REGULATORY AUTOGRAPHA CALIFORNICA NUCLEAR 277-407 PROTEIN IE-N POLYHEDROSIS VIRUS PVIF_FIVPE VIRION INFECTIVITY FACTOR CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 23-92 (STRAIN CORK) PVIF_FIVSD VIRION INFECTIVITY FACTOR FELINE IMMUNODEFICIENCY VIRUS 53-94 (ISOLATE PETALUMA) PVIF_HC1A2 VIRION INFECTIVITY FACTOR FELINE IMMUNODEFICIENCY VIRUS 32-80 (ISOLATE SAN DIEGO) PVIF_HV1B1 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (ARV2/SF2 ISOLATE PVIF_HC1B5 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (BH10, BRU, HXB2, PV PVIF_HV1EL VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (BH5 ISOLATE) PVIF_HV1JR VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (ELI ISOLATE) PVIF_HV1MA VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (JRCSF ISOLATE) PVIF_HV1MN VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  2-36 (MAL ISOLATE) PVIF_HV1N5 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (MN ISOLATE) PVIF_HV1NA VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (NEW YORK-5 ISOL PVIF_HVIND VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (ISOLATE NIT-A) PVIF_HV1OY VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (NDK ISOLATE) PVIF_HV1RH VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (OYI ISOLATE) PVIF_HV1U4 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (RF/HAT ISOLATE) PVIF_HV1Z2 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 (STRAIN UGANDAN PVIF_HV1Z6 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (Z2/CDC-Z34 ISOLAT PVIF_HV2D2 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (ZAIRE 6 ISOLATE) PVIF_HV2NZ VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 147-195 (ISOLATE D205,7) PVIF_HV2RO VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 152-193 (ISOLATE NIH-Z) PVIF_OMVVS VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 163-197 (ISOLATE ROD) PVIF_SIVAI VIRION INFECTIVITY FACTOR OVINE LENTIVIRUS (STRAIN SA-OMVV)  44-114 PVIF_SIVAG VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS  2-58 150-202 (AGM155 ISOLATE) PVIF_SIVA1 VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 17-58 (AGM3 ISOLATE) PVIF_SIVAT VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS  2-36 143-187 (ISOLATE AGM/CLONE GR1 PVIF_SIVCZ VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 20-58 150-195 (TYO-1 ISOLATE) PVIF_SIVGB VIRION INFECTIVITY FACTOR CHIMPANZEE IMMUNODEFICIENCY VIRUS  1-42 PVIMP_HSV11 VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS  1-39 (ISOLATE GB1) PVIMP_HSVEB PROBABLE INTEGRAL MEMBRANE PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)  85-134 PVIMP_HSVSA PROBABLE INTEGRAL MEMBRANE PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 148-182 335-369 PVIMP_VZVD INTEGRAL MEMBRANE PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  80-129 PVINT_SSV1 PROBABLE INTEGRAL MEMBRANE PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 107-151 155-189 267-301 PVJ01_VACCC PROBABLE INTEGRASE SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  85-130 138-172 PVJ01_VACCV PROTEIN J1 VACCINIA VIRUS (STRAIN COPENHAGEN) 22-56 PVJ01_VARV PROTEIN J1 VACCINIA VIRUS (STRAIN WR) 22-56 PVK03_VACCC PROTEIN J1 VARIOLA VIRUS 22-56 PVK03_VACCV PROTEIN K3 VACCINIA VIRUS (STRAIN COPENHAGEN) 38-82 PVK07_VACCV PROTEIN K3 VACCINIA VIRUS (STRAIN WR) 38-82 PVL02_VACCC PROTEIN K7 VACCINIA VIRUS 115-149 (STRAIN WR), AND (STRAIN COPENHAGEN) PVL02_VACCV PROTEIN L2 VACCINIA VIRUS (STRAIN COPENHAGEN) 47-81 PVL02_VARV PROTEIN L2 VACCINIA VIRUS (STRAIN WR) 47-92 PVL1_CRPVK PROTEIN L2 VARIOLA VIRUS 47-81 PVL1_FPVL PROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) 261-295 331-383 PAPILLOMAVIRUS (STRAIN KANS PVL1_HPV05 PROBABLE L1 PROTEIN AVIAN PAPILLOMAVIRUS FPV-L 38-90 PVL1_HPV08 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5 355-393 PVL1_HPV1A PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 354-392 PVL1_HPV47 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 345-379 PVL1_PAPVD PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 353-391 PVL1_REOVD PROBABLE L1 PROTEIN DEER PAPILLOMAVIRUS 23-57 PVL2_HPV05 MAJOR CORE PROTEIN LAMBDA 1 REOVIRUS (TYPE 3/STRAIN DEARING)  94-142 437-471 PVL2_HPV08 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 341-375 PVL2_HPV16 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 354-392 PVL2_HPV1A PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 16 295-333 PVL2_HPV31 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 345-379 PVL2_HPV35 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 288-326 PVL2_HPV47 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 292-333 PVL2_HPV58 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 341-375 PVL2_HPV5B PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 293-327 PVL3_REOVD PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 341-375 PVL3_REOVJ MINOR CORE PROTEIN LAMBDA 3 REOVIRUS (TYPE 3/STRAIN DEARING) 107-148 1112- 1178 PVL3_REOVL MINOR CORE PROTEIN LAMBDA 3 REOVIRUS (TYPE 2/STRAIN D5/JONES) 1112- 1178 PVL96_IRV1 MINOR CORE PROTEIN LAMBDA 3 REOVIRUS (TYPE 1/STRAIN LANG) 107-148 331-365 1112- 1178 PVM01_VACCC L96 PROTEIN TIPULA IRIDESCENT VIRUS 146-180 198-236 PVM1_REOVL PROTEIN M1 VACCINIA VIRUS (STRAIN COPENHAGEN)  5-56 PVM21_REOVD MINOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 287-321 PROTEIN MU-2 PVM22_REOVD MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING) 416-450 619-663 PROTEIN MU-1/MU-1C PVM2_REOVJ MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING) 416-450 618-662 PROTEIN MU-1/MU-1C PVM2_REOVL MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 2/STRAIN D5/JONES) 416-450 618-662 PROTEIN MU-1/MU-1C PVM3_REOVD MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 416-450 618-662 PROTEIN MU-1/MU-1C PVMA2_BRSVA MAJOR NONSTRUCTURAL PROTEIN MU-NS REOVIRUS (TYPE 3/STRAIN DEARING) 135-190 337-371 523-558 618-690 PVMA2_HRSVA MATRIX GLYCOPROTEIN M2 BOVINE RESPIRATORY SYNCYTIAL VIRUS 42-90 (STRAIN A51908) PVMA2_TRTV MATRIX GLYCOPROTEIN M2 HUMAN RESPIRATORY SYNCYTIAL VIRUS 42-90 (STRAIN A2) PVMAT_CDVO MATRIX GLYCOPROTEIN M2 TURKEY RHINOTRACHEITIS VIRUS 36-70 PVMAT_INCJJ MATRIX PROTEIN CANINE DISTEMPER VIRUS 193-234 (STRAIN ONDERSTEPOORT) PVMAT_NDVA MATRIX (M) PROTEIN INFLUENZA C VIRUS (STRAIN C/JJ/50)  73-114 151-208 PVMAT_NDVB MATRIX PROTEIN NEWCASTLE DISEASE VIRUS 310-358 (STRAIN AUSTRALIA-VICTORIA/32) PVMAT_PI3B MATRIX PROTEIN NEWCASTLE DISEASE VIRUS 324-358 (STRAIN BEAUDETTE C/45) PVMAT_PI3H4 MATRIX PROTEIN BOVINE PARAINFLUENZA 3 VIRUS  99-133 204-252 PVMAT_RABVA MATRIX PROTEIN HUMAN PARAINFLUENZA 3 VIRUS  99-133 204-252 (STRAIN NIH 47885) PVMAT_RABVC MATRIX PROTEIN RABIES VIRUS (STRAIN AVO1)  69-103 PVMAT_RABVE MATRIX PROTEIN RABIES VIRUS (STRAIN CVS-11)  69-103 PVMAT_RABVN MATRIX PROTEIN RABIES VIRUS (STRAIN ERA)  69-103 PVMAT_RABVP MATRIX PROTEIN RABIES VIRUS (STRAIN NISHIGAHARA RCEH)  69-103 PVMAT_RABVS MATRIX PROTEIN RABIES VIRUS (STRAIN PV)  69-103 PVMAT_SYNV MATRIX PROTEIN RABIES VIRUS (STRAIN SAD B19)  69-103 PVMAT_VSVIG MATRIX PROTEIN SONCHUS YELLOW NET VIRUS 246-280 PVME1_CVBM MATRIX PROTEIN VESICULAR STOMATITIS VIRUS 198-232 (SEROTYPE INDIANA/STRAIN G PVME1_CVPFS E1 GLYCOPROTEIN BOVINE CORONAVIRUS (STRAIN MEBUS) 175-209 PVME1_CVPPU E1 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS  98-146 212-257 CORONAVIRUS (S PVME1_CVPRM E1 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 212-257 CORONAVIRUS (S PVME1_CVTKE E1 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 212-257 (STRAIN RM4) PVME1_FIPV E1 GLYCOPROTEIN TURKEY ENTERIC CORONAVIRUS 28-62 175-209 PVME1_IBV6 E1 GLYCOPROTEIN PRECURSOR FELINE INFECTIOUS PERITONITIS VIRUS 212-257 (STRAIN 79-1146) PVME1_IBVB E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-55 177-218 (STRAIN 6/82) PVME1_IBVB2 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-55 177-218 (STRAIN BEAUDETTE) PVME1_IBVK E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-55 177-218 (STRAIN BEAUDETTE M4 PVMEM_EBV E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 177-218 (STRAIN KB8523) PVMP_CAMVC PROBABLE MEMBRANE PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 36-94 PVMP_CAMVD MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN CM-1841) PVMP_CAMVE MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN D/H) PVMP_CAMVN MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN BBC) PVMP_CAMVS MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN NY8153) PVMP_CAMVW MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN STRASBOURG) PVMP_CERV MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN W260) PVMP_FMVD MOVEMENT PROTEIN CARNATION ETCHED RING VIRUS 212-246 PVMP_SOCMV MOVEMENT PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 217-251 PVMSA_HPBDB MOVEMENT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS  76-118 PVMSA_HPBDC MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS 272-313 324-361 (BROWN SHANGHAI DUCK ISOLATE S PVMSA_HPBDU MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS 271-312 323-360 (STRAIN CHINA) PVMSA_HPBDW MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS 234-275 289-323 PVMSA_HPBGS MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS 272-313 324-361 (WHITE SHANGHAI DUCK ISOLATE S3 PVMSA_HPBHE MAJOR SURFACE ANTIGEN PRECURSOR GROUND SQUIRREL HEPATITIS VIRUS 210-244 PVMSA_WHV1 MAJOR SURFACE ANTIGEN PRECURSOR HERON HEPATITIS B VIRUS 294-328 PVMSA_WHV59 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCK HEPATITIS VIRUS 1 208-242 PVMSA_WHV7 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCK HEPATITIS VIRUS 59 213-247 PVMSA_WHV81 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCK HEPATITIS VIRUS 7 213-247 PVMT1_DHVI1 PROBABLE MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 8 213-247 PRECURSOR (INFECTIOUS CLONE) PVMT1_IAANN MATRIX PROTEIN 1 DHORI VIRUS (STRAIN INDIAN/1313/61) 201-235 PVMT1_IABAN MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/ANN ARBOR/6/60) PVMT1_IACAO MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/BANGKOK/1/79) PVMT1_IAFOW MATRIX (M1) PROTEIN INFLUENZA A VIRUS 31-79 (STRAIN A/CAMEL/MONGOLIA/82) PVMT1_IAFPR MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/FORT WARREN/1/50), AND (STR PVMT1_IAFPW MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PVMT1_IALE1 MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/FOWL PLAGUE VIRUS/WEYBRID PVMT1_IALE2 MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/LENINGRAD/134/57) PVMT1_IAMAN MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/LENINGRAD/134/17/57) PVMT1_IAPOC MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/MALLARD/NEW YORK/6750/78) PVMT1_IAPUE MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/PORT CHALMERS/1/73) PVMT1_IAUDO MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/PUERTO RICO/8/34) PVMT1_IAW1L MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/UDORN/307/72) PVMT1_IAZI1 MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/WILSON-SMITH/33 PVMT1_INBAC MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/SWINE/IOWA/15/30 PVMT1_INBAD MATRIX (M1) PROTEIN INFLUENZA B VIRUS 175-209 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PVMT1_INBLE MATRIX (M1) PROTEIN INFLUENZA B VIRUS 175-209 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE]) PVMT1_INBSI MATRIX (M1) PROTEIN INFLUENZA B VIRUS 175-209 (STRAIN B/LEE/40) PVMT2_INBAC MATRIX (M1) PROTEIN INFLUENZA B VIRUS 175-209 (STRAIN B/SINGAPORE/222/79) PVMT2_INBAD PROBABLE MATRIX (M2) PROTEIN INFLUENZA B VIRUS 132-184 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PVMT2_INBLE PROBABLE MATRIX (M2) PROTEIN INFLUENZA B VIRUS 132-184 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE]) PVMT2_INBSI PROBABLE MATRIX (M2) PROTEIN INFLUENZA B VIRUS 132-184 (STRAIN B/LEE/40) PVMT8_MYXVL PROBABLE MATRIX (M2) PROTEIN INFLUENZA B VIRUS 132-184 (STRAIN B/SINGAPORE/222/79) PVN01_VACCC M-T8 PROTEIN MYXOMA VIRUS (STRAIN LAUSANNE) 46-80 145-197 PVN01_VACCV PROTEIN N1 VACCINIA VIRUS (STRAIN COPENHAGEN)  64-112 PVN34_ROTBS PROTEIN N1 VACCINIA VIRUS (STRAIN WR)  64-112 PVN34_ROTPC NONSTRUCTURAL PROTEIN NS34 BOVINE ROTAVIRUS  64-169 (GROUP C/STRAIN SHINTOKU) PVNCA_AAV2 NONSTRUCTURAL PROTEIN NS34 PORCINE ROTAVIRUS  64-117 121-169 (GROUP C/STRAIN COWDEN) PVNCA_RSV DNA REPLICATION PROTEIN ADENO-ASSOCIATED VIRUS 2  91-125 217-251 PVNCN_PAVBO MAJOR NONCAPSID PROTEIN RICE STRIPE VIRUS 129-163 PVNCS_ADVG PROBABLE NONCAPSID PROTEIN NP1 BOVINE PARVOVIRUS 221-255 PVNCS_AEDEV NONCAPSID PROTEIN NS-1 ALEUTIAN MINK DISEASE PARVOVIRUS 19-60 270-304 (STRAIN G) PVNCS_FPV19 NONCAPSID PROTEIN NS-1 AEDES DENSONUCLEOSIS VIRUS 276-339 521-571 585-640 715-760 780-849 (STRAIN GKV 002 002) PVNCS_MEVA NONCAPSID PROTEIN NS-1 FELINE PANLEUKOPENIA VIRUS 53-98 (STRAIN 193) PVNCS_MUMIM NONCAPSID PROTEIN NS-1 MINK ENTERITIS VIRUS 53-98 (STRAIN ABASHIRI) PVNCS_MUMIV NONCAPSID PROTEIN NS-1 MURINE MINUTE VIRUS (STRAIN MVMI) 35-91 261-297 PVNCS_PAVBO NONCAPSID PROTEIN NS-1 MURINE MINUTE VIRUS 35-87 259-297 PVNCS_PAVCN PROBABLE NONCAPSID PROTEIN NS1 BOVINE PARVOVIRUS 181-222 PVNCS_PAVHB NONCAPSID PROTEIN NS-1 CANINE PARVOVIRUS (STRAIN N) 53-98 PVNCS_PAVHH NONCAPSID PROTEIN NS-1 HUMAN PARVOVIRUS B19 236-270 PVNCS_PAVPN NONCAPSID PROTEIN NS-1 HAMSTER PARVOVIRUS H1 35-76 259-297 PVNS1_BTV10 NONCAPSID PROTEIN NS-1 PORCINE PARVOVIRUS (STRAIN NADL-2) 24-77 169-210 309-346 PVNS1_BTV17 NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 10/ISOLATE USA) PVNS1_BTV1A NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 17/ISOLATE USA) PVNS1_BTV1S NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 1/ISOLATE AUSTRALIA) PVNS1_BTV20 NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVNS1_EHDV2 NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 20/ISOLATE AUSTRALIA) PVNS1_IAANN NONSTRUCTURAL PROTEIN NS1 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 401-454 (SEROTYPE 2/STRAI PVNS1_IACAO NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/ANN ARBOR/6/60) PVNS1_IACKG NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 37-71 (STRAIN A/CAMEL/MONGOLIA/82 PVNS1_IACKJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/CHICKEN/GERMANY/N/49) PVNS1_IADA2 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/CHICKEN/JAPAN/24) PVNS1_IADE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/DUCK/ALBERTA/60/76) PVNS1_IADU3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/DUCK/ENGLAND/1/56) PVNS1_IAFOM NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/DUCK/UKRAINE/1/63) PVNS1_IAFOW NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/FORT MONMOUTH/1/47) PVNS1_IAFPR NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/FORT WARREN/1/50, AND (STRA PVNS1_IALE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PVNS1_IALEN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/LENINGRAD/134/57) PVNS1_IAMA6 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/LENINGRAD/54/1) PVNS1_IAMAN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/MALLARD/ALBERTA/88/76 PVNS1_IAMAO NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/MALLARD/NEW YORK/6750/78) PVNS1_IAMYN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/MALLARD/NEW YORK/6874/78 PVNS1_IAPI0 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/MYNAH/HANEDA-THAI/76) PVNS1_IAPI1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PINTAIL/ALBERTA/119/79 PVNS1_IAPI2 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PINTAIL/ALBERTA/121/79) PVNS1_IAPI3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PINTAIL/ALBERTA/268/78 PVNS1_IAPUE NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PINTAIL/ALBERTA/358/79) PVNS1_IATKB NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PUERTO RICO/8/34) PVNS1_IATKC NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/TURKEY/BETHLEHEM-GLILIT/14 PVNS1_IATKR NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/TURKEY/CANADA/63) PVNS1_IATRS NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/TURKEY/OREGON/71) PVNS1_IATRT NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/TERN/SOUTH AFRICA/61 PVNS1_IAZI1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/TERN/TURKMENIA/18/72) PVNS1_INBAC NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/SWINE/IOWA/15/30) PVNS1_INBGA NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/ANN ARBOR/1/66[COLD-ADAPTE PVNS1_INBHK NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/GA/86) PVNS1_INBHT NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/HONG KONG/8/73), AND (STRAIN PVNS1_INBID NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/HT/84) PVNS1_INBLE NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/ID/86) PVNS1_INBMD NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/LEE/40) PVNS1_INBPA NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/MARYLAND/59) PVNS1_INBRU NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 277-337 (STRAIN B/PA/79) PVNS1_INBSI NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 139-173 (STRAIN B/RU/69) PVNS1_INBSJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/SINGAPORE/222/79) PVNS1_INBVJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/SINGAPORE/64) PVNS1_INBYA NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/VICTORIA/87) PVNS2_AHSV9 NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/YAMAGATA/1/73) PVNS2_BTV17 NONSTRUCTURAL PROTEIN NS2 AFRICAN HORSE SICKNESS VIRUS  67-101 (SEROTYPE 9) PVNS2_BTV1X NONSTRUCTURAL PROTEIN NS2 BLUETONGUE VIRUS 203-237 (SEROTYPE 17/ISOLATE USA) PVNS2_CVMJH NONSTRUCTURAL PROTEIN NS2 BLUETONGUE VIRUS (SEROTYPE 10) 203-237 PVNS2_EHDV2 NONSTRUCTURAL PROTEIN NS2 MURINE CORONAVIRUS MHV (STRAIN JHM)  71-105 PVNS2_IAALA NONSTRUCTURAL PROTEIN NS2 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 206-272 276-311 (SEROTYPE 2/STRAI PVNS2_IAANA NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/ALASKA/6/77), AND (STRAIN A/U PVNS2_IAANN NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/ANAS ACUTA/PRIMORJE/695/76) PVNS2_IACHI NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/ANN ARBOR/6/60), AND (STRAIN PVNS2_IACKG NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/CHILE/1/83) PVNS2_IACKJ NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/CHICKEN/GERMANY/N/49) PVNS2_IADA2 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-90 (STRAIN A/CHICKEN/JAPAN/24) PVNS2_IADE1 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/DUCK/ALBERTA/60/76) PVNS2_IADU3 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-90 (STRAIN A/DUCK/ENGLAND/1/56) PVNS2_IAFOM NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-90 (STRAIN A/DUCK/UKRAINE/1/63) PVNS2_IAFOW NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/FORT MONMOUTH/1/47) PVNS2_IAFPR NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/FORT WARREN/1/50) PVNS2_IALE2 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PVNS2_IALEN NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/LENINGRAD/134/17/57) PVNS2_IAMA6 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/LENINGRAD/54/1) PVNS2_IAMA8 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/MALLARD/ALBERTA/88/76) PVNS2_IAMAN NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/MALLARD/ALBERTA/827/78) PVNS2_IAMAO NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/MALLARD/NEW YORK/6750/78) PVNS2_IAMYN NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/MALLARD/NEW YORK/6874/78) PVNS2_IAPI0 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-90 (STRAIN A/MYNAH/HANEDA-THAI/76) PVNS2_IAPI1 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/PINTAIL/ALBERTA/119/79) PVNS2_IAPI2 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/PINTAIL/ALBERTA/121/79) PVNS2_IAPUE NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/PINTAIL/ALBERTA/268/78) PVNS2_IATKB NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/PUERTO RICO/8/34) PVNS2_IATKR NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/TURKEY/BETHLEHEM-GLILIT/14 PVNS2_IATRS NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/TURKEY/OREGON/71 PVNS2_IAUSS NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-52 (STRAIN A/TERN/SOUTH AFRICA/61) PVNS2_INBLE NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/USSR/90/77) PVNS2_INBYA NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS  2-43  59-119 (STRAIN B/LEE/40 PVNS2_INCJJ NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS  2-43  59-119 (STRAIN B/YAMAGATA/1/73) PVNS2_PVM NONSTRUCTURAL PROTEIN NS2 INFLUENZA C VIRUS 57-98 (STRAIN C/JJ/50) PVNS3_AHSV3 NONSTRUCTURAL PROTEIN 2 PNEUMONIA VIRUS OF MICE  70-104 PVNS3_AHSV9 NONSTRUCTURAL PROTEIN NS3 AFRICAN HORSE SICKNESS VIRUS 44-78 166-215 (SEROTYPE 3) PVNS3_BRD NONSTRUCTURAL PROTEIN NS3 AFRICAN HORSE SICKNESS VIRUS 37-78  88-122 166-215 (SEROTYPE 9) PVNS3_CVPFS NONSTRUCTURAL PROTEIN NS3 BROADHAVEN VIRUS 26-98 102-147 PVNS4_CVH22 NONSTRUCTURAL PROTEIN 3-1 PORCINE TRANSMISSIBLE GASTROENTERITIS 13-51 CORONAVIRUS (S PVNS4_RSV NONSTRUCTURAL PROTEIN 4 HUMAN CORONAVIRUS (STRAIN 229E) 11-52 PVNS7_CVCAE NONSTRUCTURAL PROTEIN NS4 RICE STRIPE VIRUS  2-40 PVNS7_CVFE3 NONSTRUCTURAL PROTEIN 7 CANINE ENTERIC CORONAVIRUS (STRAIN K378) 11-47 PVNS7_FIPV NONSTRUCTURAL PROTEIN 7 FELINE ENTERIC CORONAVIRUS (STRAIN 79-1683)  1-42 PVNSC_CDVO NONSTRUCTURAL PROTEIN 7 FELINE INFECTIOUS PERITONITIS VIRUS  1-42 (STRAIN 79-1146) PVNSC_MEASE NONSTRUCTURAL PROTEIN C CANINE DISTEMPER VIRUS 50-84  95-152 (STRAIN ONDERSTEPOORT) PVNSC_MEASI NONSTRUCTURAL PROTEIN C MEASLES VIRUS (STRAIN EDMONSTON) 43-84 PVNSC_MEASY NONSTRUCTURAL PROTEIN C MEASLES VIRUS (STRAIN IP-3-CA) 43-84 PVNSC_PI1HB NONSTRUCTURAL PROTEIN C MEASLES VIRUS (STRAIN YAMAGATA-1) 43-84 PVNSC_PI1HC NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 133-167 (STRAIN C35) PVNSC_PI1HD NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 133-167 (STRAIN C39) PVNSC_PI1HE NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 133-167 (STRAIN C1-5/73) PVNSC_PI3H4 NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 40-75 133-167 (STRAIN C1-14/83) PVNSC_SEND6 NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 3 VIRUS  58-133 161-199 (STRAIN NIH 47885) PVNSC_SENDH NONSTRUCTURAL PROTEIN C SENDAI VIRUS (STRAIN 6/94) 133-167 PVNSC_SENDZ NONSTRUCTURAL PROTEIN C SENDAI VIRUS (STRAIN HARRIS) 133-167 PVNSM_INSV NONSTRUCTURAL PROTEIN C SENDAI VIRUS (STRAIN Z) 133-167 PVNST_BUNGE NONSTRUCTURAL PROTEIN NS-M IMPATIENS NECROTIC SPOT VIRUS (INSV)  44-102 262-296 PVNST_BUNL7 NONSTRUCTURAL PROTEIN NS-S BUNYAVIRUS GERMISTON 34-75 PVNST_BUNLC NONSTRUCTURAL PROTEIN NS-S BUNYAVIRUS LA CROSSE (ISOLATE L74)  5-39 PVNST_MAGV NONSTRUCTURAL PROTEIN NS-S BUNYAVIRUS LA CROSSE  5-39 PVNST_TOSV NONSTRUCTURAL PROTEIN NS-S MAGUARI VIRUS 35-69 PVNST_UUK NONSTRUCTURAL PROTEIN NS-S TOSCANA VIRUS (TOS) 144-183 PVNUA_PRVKA NONSTRUCTURAL PROTEIN NS-S UUKUNIEMI VIRUS (UUK) 139-173 PVNUC_DHVI 1 PROBABLE NUCLEAR ANTIGEN PSEUDORABIES VIRUS (STRAIN KAPLAN) (PRV) 1134- 1175 PVNUC_EBOV NUCLEOPROTEIN DHORI VIRUS (STRAIN INDIAN/1313/61) (DHO) 209-243 PVNUC_IAANA NUCLEOPROTEIN EBOLA VIRUS 191-225 227-261 329-369 PVNUC_IAANN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/ANAS ACUTA/PRIMORJE/695/76) PVNUC_IABRA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-408 (STRAIN A/ANN ARBOR/6/60) PVNUC_IABUD NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-408 (STRAIN A/BRAZIL/11/78) PVNUC_IACAL NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PVNUC_IACKG NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/CALIFORNIA/10/78) PVNUC_IACKP NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/CHICKEN/GERMANY/N/49) PVNUC_IADAU NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/CHICKEN/PENNSYLVANIA/1/83) PVNUC_IADBE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/DUCK/AUSTRALIA/749/80) PVNUC_IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/DUCK/BEIJING/1/78) PVNUC_IADE1 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 360-408 (STRAIN A/DUCK/CZECHOSLOVAKIA/56) PVNUC_IADE2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/DUCK/ENGLAND/1/56) PVNUC_IADHK NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/DUCK/ENGLAND/1/62) PVNUC_IADM2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/DUCK/HONG KONG/7/75) PVNUC_IADMA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/DUCK/MEMPHIS/928/74 PVNUC_IADNZ NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/DUCK/MANITOBA/1/53) PVNUC_IADU2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/DUCK/NEW ZEALAND/31/76) PVNUC_IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS  96-154 357-408 (STRAIN A/DUCK/UKRAINE/2/60) PVNUC_IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/ENGLAND/19/55) PVNUC_IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/FORT MONMOUTH/1/47) PVNUC_IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS 357-408 (STRAIN A/FORT WARREN/1/50) PVNUC_IAFPR NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/FOWL PLAGUE VIRUS/DOBSONA PVNUC_IAGRE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 360-408 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PVNUC_IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 113-154 357-408 (STRAIN A/GREY TEAL/AUSTRALIA/2/79) PVNUC_IAGU2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-408 (STRAIN A/GULL/MARYLAND/5/77) PVNUC_IAGU3 NUCLEOPROTEIN INFLUENZA A VIRUS  96-154 357-409 (STRAIN A/GULL/MARYLAND/704/77) PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-409 (STRAIN A/GULL/MARYLAND/1824/78) PVNUC_IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-409 (STRAIN A/GULL/MARYLAND/1815/79) PVNUC_IAGUM NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-409 (STRAIN A/GULL/ASTRAKHAN/227/84) PVNUC_IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-409 (STRAIN A/GULL/MASSACHUSETTS/26/80) PVNUC_IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-409 (STRAIN A/GULL/MINNESOTA/945/80) PVNUC_IAHJI NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/HICKOX/40) PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/EQUINE/JILLIN/1/89) PVNUC_IAHMI NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/EQUINE/LONDON/1416/73) PVNUC_IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 (STRAIN A/EQUINE/MIAMI/1/63) PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/HONG KONG/1/68) PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/HONG/KONG/5/83) PVNUC_IAHTE NUCLEOPROTEIN INFLUENZA A VIRUS  96-154 357-408 (STRAIN A/EQUINE/PRAGUE/1/56) PVNUC_IAKIE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 PVNUC_IALEN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/KIEV/59/79) PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/LENINGRAD/54/1) PVNUC_IAMAN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 PVNUC_IAMIN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/MALLARD/NEW YORK/6750/78) PVNUC_IANEJ NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/MINK/SWEDEN/84) PVNUC_IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/NEW JERSEY/8/76) PVNUC_IAOHI NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/NT/60/68) PVNUC_IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/OHIO/4/83) PVNUC_IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/PARROT/ULSTER/73) PVNUC_IARUD NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/PUERTO RICO/8/34) PVNUC_IASE0 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/RUDDY TURNSTONE/NEW JERSE PVNUC_IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SEAL/MASSACHUSETTS/1/80) PVNUC_IASIN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-408 (STRAIN A/SHEARWATER/AUSTRALIA/72) PVNUC_IATEI NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/SINGAPORE/1/57) PVNUC_IATKN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/TEAL/ICELAND/29/80) PVNUC_IATKO NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/TURKEY/MINNESOTA/1661/81) PVNUC_IATRS NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/TURKEY/ONTARIO/7732/66) PVNUC_IATRT NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 360-408 (STRAIN A/TERN/SOUTH AFRICA/61) PVNUC_IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-405 (STRAIN A/TERN/TURKMENIA/18/72) PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/TEXAS/1/77) PVNUC_IAUSS NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/UDORN/307/72) PVNUC_IAV16 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-408 (STRAIN A/USSR/90/77) PVNUC_IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS 357-408 (STRAIN A/VICTORIA/5/68) PVNUC_IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-409 (STRAIN A/WHALE/MAINE/328/84) PVNUC_IAWIL NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/WHALE/PACIFIC OCEAN/19/76) PVNUC_IAWIS NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/WILSON-SMITH/33) PVNUC_IAZ29 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/WISCONSIN/3523/88) PVNUC_IAZ41 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/29/37) PVNUC_IAZCA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/41/49) PVNUC_IAZDA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/SWINE/CAMBRIDGE/1/35) PVNUC_IAZGE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/SWINE/DANDONG/9/83) PVNUC_IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/GERMANY/2/81) PVNUC_IAZH3 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/SWINE/HONG KONG/6/76) PVNUC_IAZH4 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/HONG KONG/126/82) PVNUC_IAZI1 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/HONG KONG/127/82) PVNUC_IAZI2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/IOWA/15/30) PVNUC_IAZI3 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/IOWA/1976/31) PVNUC_IAZJ1 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/IOWA/46) PVNUC_IAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/ITALY/437/76) PVNUC_IAZJ3 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/ITALY/2/79) PVNUC_IAZJ4 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/ITALY/141/81) PVNUC_IAZJA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/ITALY/839/89) PVNUC_IAZMA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/JAMESBURG/42) PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/MAY/54) PVNUC_IAZOH NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/NETHERLANDS/12/85) PVNUC_IAZON NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/OHIO/23/35) PVNUC_IAZTE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/ONTARIO/2/81) PVNUC_IAZW1 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/TENNESSEE/24/77) PVNUC_IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/WISCONSIN/1/57) PVNUC_INBAA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/WISCONSIN/1/61) PVNUC_INBAC NUCLEOPROTEIN INFLUENZA B VIRUS  75-142 480-514 (STRAIN B/ANN ARBOR/1/86) PVNUC_INBAD NUCLEOPROTEIN INFLUENZA B VIRUS  75-142 480-514 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PVNUC_INBLE NUCLEOPROTEIN INFLUENZA B VIRUS  75-145 480-514 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE]) PVNUC_INBSI NUCLEOPROTEIN INFLUENZA B VIRUS  75-146 480-514 (STRAIN B/LEE/40) PVNUC_INCCA NUCLEOPROTEIN INFLUENZA B VIRUS  75-142 480-514 (STRAIN B/SINGAPORE/222/79) PVNUC_MABVM NUCLEOPROTEIN INFLUENZA C VIRUS  92-203 406-447 (STRAIN C/CALIFORNIA/78) PVNUC_MABVP NUCLEOPROTEIN MARBURG VIRUS (STRAIN MUSOKE) 173-207 322-407 PVO01_VACCC NUCLEOPROTEIN MARBURG VIRUS (STRAIN POPP) 173-207 322-407 PVO01_VARV PROTEIN O1 VACCINIA VIRUS (STRAIN COPENHAGEN) 102-145 245-279 341-382 581-615 PVOR1_FXMV PROTEIN O1 VARIOLA VIRUS 102-145 245-279 341-382 581-615 PVOR1_NMV 152 KD PROTEIN FOXTAIL MOSAIC VIRUS 293-327 PVOR1_PMV 186 KD PROTEIN NARCISSUS MOSAIC VIRUS (NMV) 1519- 1575 PVOR1_PVMR 176 KD PROTEIN PAPAYA MOSAIC POTEXVIRUS (PMV)  1-39 299-337 1474- 1532 PVOR1_PVX 223 KD PROTEIN POTATO VIRUS M (STRAIN RUSSIAN) (PVM) 597-638 682-759 PVOR1_PVXCP 165 KD PROTEIN POTATO VIRUS X (PVX) 516-550 PVOR1_SMYEA 165 KD PROTEIN POTATO VIRUS X (STRAIN CP) (PVX) 510-547 PVOR1_WCMVM 150 KD PROTEIN STRAWBERRY MILD YELLOW EDGE- 308-342 931-965 ASSOCIATED VIRUS (SMYE PVOR1_WCMVO 147 KD PROTEIN WHITE CLOVER MOSAIC VIRUS 1240- (STRAIN M) (WCMV) 1289 PVP10_NPVAC 147 KD PROTEIN WHITE CLOVER MOSAIC VIRUS 1240- (STRAIN O) (WCMV) 1289 PVP10_NPVOP P10 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR  7-41 POLYHEDROSIS VIRUS ( PVP10_RBSDV P10 PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID  7-50 POLYHEDROSIS VIRUS PVP10_RGDV PROTEIN S10 RICE BLACK STREAKED DWARF VIRUS 339-382 395-429 506-556 (RBSDV) PVP10_WTV NONSTRUCTURAL PROTEIN PNS10 RICE GALL DWARF VIRUS (RGDV) 186-273 PVP11_RDV NONSTRUCTURAL PROTEIN PNS10 WOUND TUMOR VIRUS (WTV) 220-254 PVP11_WTV NONSTRUCTURAL PROTEIN PNS11 RICE DWARF VIRUS (RDV) 25-80 273-314 PVP12_RDV NONSTRUCTURAL PROTEIN PNS11 WOUND TUMOR VIRUS (WTV) 16-74 PVP12_WTV NONSTRUCTURAL PROTEIN P11 RICE DWARF VIRUS (RDV)) 140-181 PVP18_WTVNJ NONSTRUCTURAL PROTEIN PNS12 WOUND TUMOR VIRUS (WTV)  68-108 PVP19_HSVEB NONSTRUCTURAL PROTEIN PNS12 WOUND TUMOR VIRUS (STRAIN NJ)  68-108 (WTV) PVP23_HCMVA CAPSID ASSEMBLY AND DNA MATURATION EQUINE HERPESVIRUS TYPE 1 189-231 PROTE (STRAIN AB4P) (EHV-1) PVP23_HSV6U PROBABLE CAPSID PROTEIN VP23 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 41-82 146-180 PVP24_EBOV PROBABLE CAPSID PROTEIN VP23 HERPES SIMPLEX VIRUS 47-81 (TYPE 6/STRAIN UGANDA-1102) PVP26_HSVEB MEMBRANE-ASSOCIATED STRUCTURAL EBOLA VIRUS 166-200 PROTEIN V PVP26_HSVSA CAPSID PROTEIN VP26 EQUINE HERPESVIRUS TYPE 1 36-77 (STRAIN AB4P) (EHV-1) PVP26_NPVOP CAPSID PROTEIN VP26 HERPESVIRUS SAIMIRI (STRAIN 11) 41-78 PVP26_VZVD P26 PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 118-159 POLYHEDROSIS VIRUS PVP2_AHSV4 CAPSID PROTEIN VP26 VARICELLA-ZOSTER VIRUS 47-81 (STRAIN DUMAS) (VZV) PVP2_BTV10 OUTER CAPSID PROTEIN VP2 AFRICAN HORSE SICKNESS VIRUS 136-188 270-304 410-465 614-662 684-720  976- (SEROTYPE 4/STRAIN VACCI 1056 PVP2_BTV11 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS 168-225 (SEROTYPE 10/ISOLATE USA) PVP2_BTV17 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS  77-111 559-593 (SEROTYPE 11/ISOLATE USA) PVP2_BTV1S OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS  77-111 168-209 (SEROTYPE 17/ISOLATE USA) PVP2_EHDV1 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS 119-153 576-610 668-702 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP2_ROTBR OUTER CAPSID PROTEIN VP2 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS  72-106 247-301 405-453 461-495 895-929 (SEROTYPE 1) (EHDV PVP2_ROTBU RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN RF)  2-94 482-516 523-557 607-655 675-754 PVP2_ROTHW RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN UK)  2-94 483-517 524-558 608-656 676-755 PVP2_ROTPC RNA-BINDING PROTEIN VP2 HUMAN ROTAVIRUS 17-97 492-526 533-567 617-658 685-764 (SEROTYPE 1/STRAIN WA) PVP2_ROTS1 RNA-BINDING PROTEIN VP2 PORCINE ROTAVIRUS  1-50 52-99 194-228 515-551 599-643 705-746 (GROUP C/STRAIN COWDEN) PVP30_ASFE7 RNA-BINDING PROTEIN VP2 SIMIAN 11 ROTAVIRUS 36-96 483-517 608-656 680-755 (STRAIN SA11) PVP31_FRG3V PHOSPHOPROTEIN P30 AFRICAN SWINE FEVER VIRUS 29-89 (STRAIN E-75) (ASFV) PVP32_ASFB7 EARLY 31 KD PROTEIN FROG VIRUS 3 (FV3) 227-261 PVP35_EBOV PHOSPHOPROTEIN P32 AFRICAN SWINE FEVER VIRUS 29-89 (STRAIN BA71V) (ASFV) PVP35_NPVAC POLYMERASE COMPLEX PROTEIN VP35 EBOLA VIRUS  80-119 PVP35_NPVBM EARLY 35 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR  54-102 POLYHEDROSIS VIRUS PVP35_VACCC EARLY 35 KD PROTEIN BOMBYX MORI NUCLEAR POLYHEDROSIS  54-102 224-258 VIRUS (BMNPV) PVP35_VACCP IMMUNODOMINANT ENVELOPE VACCINIA VIRUS (STRAIN COPENHAGEN) 140-181 PROTEIN P35 PVP35_VACCV IMMUNODOMINANT ENVELOPE VACCINIA VIRUS (STRAIN L-IVP) 17-51 PROTEIN P35 PVP35_VARV IMMUNODOMINANT ENVELOPE VACCINIA VIRUS (STRAIN WR) 140-181 PROTEIN P35 PVP3_AHSV4 IMMUNODOMINANT ENVELOPE VARIOLA VIRUS 141-182 PROTEIN P35 PVP3_BTV10 VP3 CORE PROTEIN AFRICAN HORSE SICKNESS VIRUS 173-214 240-274 667-704 (SEROTYPE 4/STRAIN VACCI PVP3_BTV17 VP3 CORE PROTEIN BLUETONGUE VIRUS 214-255 853-894 (SEROTYPE 10/ISOLATE USA) PVP3_BTV1A VP3 CORE PROTEIN BLUETONGUE VIRUS 214-255 853-894 (SEROTYPE 17/ISOLATE USA) PVP3_EHDV1 VP3 CORE PROTEIN BLUETONGUE VIRUS 214-255 853-894 (SEROTYPE 1/ISOLATE AUSTRALIA) PVP3_EHDVA VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 208-246 798-832 851-892 (SEROTYPE 1) (EHDV PVP3_GFLV VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 208-246 735-770 798-832 851-892 PVP3_RDV P3 PROTEIN GRAPEVINE FANLEAF VIRUS (GFLV)  96-133 PVP3_ROTPC MAJOR 114 KD STRUCTURAL PROTEIN RICE DWARF VIRUS (RDV) 299-337 817-872 PVP3_ROTS1 INNER CORE PROTEIN VP3 PORCINE ROTAVIRUS 24-58 229-263 329-395 406-446 640-688 (GROUP C/STRAIN COWDEN) PVP40_EBV INNER CORE PROTEIN VP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 26-76 244-278 331-365 415-492 662-696 PVP40_HSV11 CAPSID PROTEIN P40 EPSTEIN-BARR VIRUS 433-467 (STRAIN B95-8) (HUMAN HERPESVIRUS 4) PVP40_HSVEB CAPSID PROTEIN P40 HERPES SIMPLEX VIRUS 206-257 599-633 (TYPE 1/STRAIN 17) PVP40_ILTVT CAPSID PROTEIN P40 EQUINE HERPESVIRUS TYPE 1 180-245 (STRAIN AB4P) (EHV-1) PVP40_SCMVC CAPSID PROTEIN P40 INFECTIOUS LARYNGOTRACHEITIS VIRUS  1-35 509-557 (STRAIN THORNE V88 PVP40_VZVD CAPSID PROTEIN P40 SIMIAN CYTOMEGALOVIRUS 457-498 (STRAIN COLBURN) PVP41_NPVAC CAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS 167-246 486-522 (STRAIN DUMAS) (VZV) PVP41_ROTS1 STRUCTURAL GLYCOPROTEIN GP41 AUTOGRAPHA CALIFORNICA NUCLEAR 132-166 POLYHEDROSIS VIRUS ( PVP42_ROTS1 OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11)  1-35 484-518 528-630 PVP4A_VACCC OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11)  1-35 237-518 531-646 PVP4A_VACCV MAJOR CORE PROTEIN P4A PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 355-359 718-763 794-828 857-891 PVP4A_VARV MAJOR CORE PROTEIN P4A PRECURSOR VACCINIA VIRUS (STRAIN WR) 262-296 355-359 718-763 794-828 857-891 PVP4B_FOWPV MAJOR CORE PROTEIN P4A PRECURSOR VARIOLA VIRUS 355-389 719-764 795-829 858-892 PVP4B_VACCC MAJOR CORE PROTEIN P4B PRECURSOR FOWLPOX VIRUS 131-172 296-330 PVP4B_VACCV MAJOR CORE PROTEIN P4B PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN)  3-37 125-163 249-283 PVP4B_VARV MAJOR CORE PROTEIN P4B PRECURSOR VACCINIA VIRUS (STRAIN WR)  3-37 125-163 249-283 PVP4_BTV10 MAJOR CORE PROTEIN P4B PRECURSOR VARIOLA VIRUS  3-37 125-163 249-283 PVP4_BTV11 VP4 CORE PROTEIN BLUETONGUE VIRUS 579-617 619-653 (SEROTYPE 10/ISOLATE USA) PVP4_BTV13 VP4 CORE PROTEIN BLUETONGUE VIRUS 569-607 609-643 (SEROTYPE 11/ISOLATE USA) PVP4_BTV2A VP4 CORE PROTEIN BLUETONGUE VIRUS 569-607 609-643 (SEROTYPE 13/ISOLATE USA) PVP4_NCDV VP4 CORE PROTEIN BLUETONGUE VIRUS 569-607 609-643 (SEROTYPE 2/ISOLATE USA) PVP4_RDV OUTER CAPSID PROTEIN VP4 NEBRASKA CALF DIARRHEA VIRUS 484-518 528-630 (STRAIN NCDV-LINCOLN) PVP4_ROTB4 NONSTRUCTURAL PROTEIN PNS4 RICE DWARF VIRUS (RDV) 388-437 444-478 627-679 PVP4_ROTBC OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS  1-35 112-146 338-379 484-518 528-653 (SEROTYPE 6/STRAIN B641) PVP4_ROTBU OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS  1-35 484-518 528-630 (STRAIN C486) PVP4_ROTEH OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS  1-35 112-146 338-379 484-518 528-653 (STRAIN UK) PVP4_ROTG1 OUTER CAPSID PROTEIN VP4 EQUINE ROTAVIRUS  1-35 112-146 227-274 345-379 484-518 528-653 (STRAIN H-2) PVP4_ROTH1 OUTER CAPSID PROTEIN VP4 ROTAVIRUS (GROUP B/STRAIN IDIR) 117-151 476-519 PVP4_ROTH5 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 236-273 337-378 483-517 530-645 (SEROTYPE 1/STRAIN 1076) PVP4_ROTH6 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 236-273 337-378 483-517 527-652 (SEROTYPE 2/STRAIN RV-5) PVP4_ROTHD OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 112-146 237-274 338-379 484-518 531-646 (SEROTYPE 1/STRAIN 69M) PVP4_ROTHJ OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 236-273 337-378 483-517 527-652 (SEROTYPE 2/STRAIN DS1) PVP4_ROTHK OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 237-274 345-379 484-518 528-588 (STRAIN K8) PVP4_ROTHL OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 337-378 483-517 527-652 (STRAIN KU) PVP4_ROTHM OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 236-273 337-378 483-517 527-652 (STRAIN L26) PVP4_ROTHN OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 337-378 483-517 530-645 (SEROTYPE 1/STRAIN M37) PVP4_ROTHP OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 237-274 338-379 484-518 531-645 (SEROTYPE 3/STRAIN MCN13) PVP4_ROTHR OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 236-273 337-378 483-517 527-652 (SEROTYPE 3/STRAIN P) PVP4_ROTHT OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-38  91-146 227-274 (SEROTYPE 3/STRAIN RRV) PVP4_ROTHV OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 236-273 337-378 483-517 530-644 (SEROTYPE 4/STRAIN ST. THOMAS 3) PVP4_ROTHW OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 237-273 344-378 483-517 527-652 (SEROTYPE 4/STRAIN VA70 PVP4_ROTP5 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 237-273 344-378 483-517 527-652 (SEROTYPE 1/STRAIN WA) PVP4_ROTPC OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS 112-146 484-518 528-629 (SEROTYPE 5/STRAIN OSU) PVP4_ROTPG OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS  6-40 127-161 241-278 293-334 580-614 (GROUP C/STRAIN COWDEN) PVP4_ROTPY OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS  1-35 236-273 337-378 483-517 530-564 569-638 (STRAIN GOTTFRIED) PVP4_ROTRH OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS  1-35 112-146 237-274 484-518 528-629 (STRAIN YM) PVP4_RPTSF OUTER CAPSID PROTEIN VP4 RHESUS ROTAVIRUS  1-38 112-146 237-274 338-379 484-522 531-646 PVP4_ROTSS OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS  1-35 484-518 528-630 (STRAIN SA11-FEM) PVP4_WTV DE OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS  1-35 237-274 345-379 484-518 531-646 (STRAIN SA11-SEM) PVP5_AHSV4 NONSTRUCTURAL PROTEIN PNS4 WOUND TUMOR VIRUS (WTV) 28-62 565-621 PVP5_BRD OUTER CAPSID PROTEIN VP5 AFRICAN HORSE SICKNESS VIRUS  7-58 113-229 (SEROTYPE 4/STRAIN VACCI PVP5_BTV10 OUTER CAPSID PROTEIN VP5 BROADHAVEN VIRUS (BRD) 45-86  98-226 PVP5_BTV11 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58  92-150 154-222 404-438 (SEROTYPE 10/ISOLATE USA) PVP5_BTV13 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58  92-150 154-222 404-445 (SEROTYPE 11/ISOLATE USA) PVP5_BTV1A OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58 154-222 404-438 (SEROTYPE 13/ISOLATE USA) PVP5_BTV1S OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58  92-143 148-222 404-438 (SEROTYPE 1/ISOLATE AUSTRALIA) PVP5_BTV2A OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58  92-143 148-222 404-438 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP5_EHDV1 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58  92-222 404-438 (SEROTYPE 2/ISOLATE USA) PVP5_RDV OUTER CAPSID PROTEIN VP5 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 24-58  92-126 163-233 291-325 399-433 (SEROTYPE 1) (EHDV PVP5_WTV OUTER COAT PROTEIN P5 RICE DWARF VIRUS (RDV) 38-86  95-136 505-594 PVP61_BTV10 OUTER COAT PROTEIN P5 WOUND TUMOR VIRUS (WTV) 434-503 547-581 751-798 PVP61_MRDV VP6 PROTEIN BLUETONGUE VIRUS 163-215 (SEROTYPE 10/ISOLATE USA) PVP61_NPVAC PROBABLE NONSTRUCTURAL 41.0 KD MAIZE ROUGH DWARF VIRUS (MRDV) 128-202 PROTEIN PVP62_BTV10 61 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 29-96 351-386 POLYHEDROSIS VIRUS ( PVP64_NPVOP VP6 PROTEIN BLUETONGUE VIRUS 47-88 159-207 214-251 (SEROTYPE 10/ISOLATE USA) PVP67_NPVAC MAJOR ENVELOPE GLYCOPROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 296-361 431-479 PRECURSOR POLYHEDROSIS VIRUS PVP67_NPVGM MAJOR ENVELOPE GLYCOPROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 44-78 289-364 443-477 PRECURSOR POLYHEDROSIS VIRUS ( PVP6_BTV11 MAJOR ENVELOPE GLYCOPROTEIN GALLERIA MELLONELLA NUCLEAR 206-281 POLYHEDROSIS VIRUS (GMN PVP6_BTV13 VP6 PROTEIN BLUETONGUE VIRUS 159-211 (SEROTYPE 11/ISOLATE USA) PVP6_BTV17 VP6 PROTEIN BLUETONGUE VIRUS 159-211 (SEROTYPE 13/ISOLATE USA) PVP6_BTV1S VP6 PROTEIN BLUETONGUE VIRUS  68-102 159-211 (SEROTYPE 17/ISOLATE USA) PVP6_BTV2A VP6 PROTEIN BLUETONGUE VIRUS 12-78 163-211 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP6_RDV VP6 PROTEIN BLUETONGUE VIRUS 44-78 135-187 (SEROTYPE 2/ISOLATE USA) PVP6_WTV STRUCTURAL PROTEIN P6 RICE DWARF VIRUS (RDV) 150-191 296-344 360-401 PVP6_WTVNJ STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS (WTV) 144-178 286-334 400-434 PVP74_NPVAC STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS 144-178 286-334 (STRAIN NJ) (WTV) PVP74_NPVCF P74 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 387-456 POLYHEDROSIS VIRUS ( PVP75_HSVSA P74 PROTEIN CHORISTONEURA FUMIFERANA NUCLEAR 385-453 POLYHEDROSIS VIRU PVP79_NPVAC PROBABLE MEMBRANE ANTIGEN 75 HERPESVIRUS SAIMIRI (STRAIN 11) 50-99 163-211 931-984 PVP7_BTV10 79 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 44-78 363-397 406-440 POLYHEDROSIS VIRUS ( PVP7_BTV13 VP7 CORE PROTEIN BLUETONGUE VIRUS 184-228 (SEROTYPE 10/ISOLATE USA), (SEROTYPE PVP7_BTV17 VP7 CORE PROTEIN BLUETONGUE VIRUS 201-235 (SEROTYPE 13/ISOLATE USA) PVP7_BTV1A VP7 CORE PROTEIN BLUETONGUE VIRUS 184-228 (SEROTYPE 17/ISOLATE USA) PVP7_BTV1S VP7 CORE PROTEIN BLUETONGUE VIRUS 184-235 (SEROTYPE 1/ISOLATE AUSTRALIA) PVP7_BTV2A VP7 CORE PROTEIN BLUETONGUE VIRUS 184-228 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP7_EHDV1 VP7 CORE PROTEIN BLUETONGUE VIRUS 184-228 (SEROTYPE 2/ISOLATE USA) PVP7_RDV VP7 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 16-50 134-178 (SEROTYPE 1) (EHDV PVP7_WTV NONSTRUCTURAL PROTEIN PNS7 RICE DWARF VIRUS (RDV) 47-95 172-255 PVP80_NPVAC NONSTRUCTURAL PROTEIN PNS7 WOUND TUMOR VIRUS (WTV) 47-84 195-243 458-495 PVP87_NPVOP CAPSID PROTEIN P80 AUTOGRAPHA CALIFORNICA NUCLEAR  7-51  99-142 156-204 221-298 POLYHEDROSIS VIRUS ( PVP8_BTV10 CAPSID PROTEIN P87 ORGYIA PSEUDOTSUGATA MULTICAPSID  80-162 410-451 POLYHEDROSIS VIRUS PVP8_BTV11 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS  54-102 185-219 (SEROTYPE 10/ISOLATE USA) PVP8_BTV13 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS  54-102 185-219 (SEROTYPE 11/ISOLATE USA) PVP8_BTV17 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS  54-102 185-219 (SEROTYPE 13/ISOLATE USA) PVP8_BTV1A NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS  54-102 185-219 (SEROTYPE 17/ISOLATE USA) PVP8_BTV1S NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS  54-102 185-219 (SEROTYPE 1/ISOLATE AUSTRALIA) PVP8_BTV2A NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS  54-102 185-219 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP8_FOWPV NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS  54-102 185-219 (SEROTYPE 2/ISOLATE USA) PVP9_RDV STRUCTURAL PROTEIN VP8 PRECURSOR FOWLPOX VIRUS 193-245 PVP9_WTV NONSTRUCTURAL PROTEIN PNS9 RICE DWARF VIRUS (RDV) 13-47 186-226 PVP9_WTVNJ STRUCTURAL PROTEIN P9 WOUND TUMOR VIRUS (WTV) 140-212 PVPG_BYDV1 STRUCTURAL PROTEIN P9 WOUND TUMOR VIRUS 140-212 (STRAIN NJ) (WTV) PVPHE_NPVAC PUTATIVE GENOME-LINKED PROTEIN BARLEY YELLOW DWARF VIRUS 25-59 PRECURSOR (ISOLATE MAV-PS1) (BYDV) PVPHE_NPVOP 29 KD POLYHEDRAL ENVELOPE PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 146-223 POLYHEDROSIS VIRUS ( PVPR_SIVML 32 KD POLYHEDRAL ENVELOPE PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 131-201 206-265 POLYHEDROSIS VIRUS PVPU_HV1A2 VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS  78-115 (K78 ISOLATE) (SIV-MAC) PVPU_HV1B1 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-38 (ARV2/SF2 ISOLATE PVPU_HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-72 (BH10 ISOLATE) (HI PVPU_HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  5-72 (BH8 ISOLATE) (HIV PVPU_HV1BR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-59 (BRAIN ISOLATE) (H PVPU_HV1C4 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-72 (BRU ISOLATE) (HIV PVPU_HV1EL VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  3-40 (CDC-451 ISOLATE) PVPU_HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  6-40 (ELI ISOLATE) (HIV- PVPU_HV1J3 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  5-72 (HXB2 ISOLATE) (HI PVPU_HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  2-50 (JH3 ISOLATE) (HIV- PVPU_HV1MA VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-59 (JRCSF ISOLATE) (H PVPU_HV1ND VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  5-50 (MAL ISOLATE) (HI PVPU_HV1PV VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-40 (NDK ISOLATE) (HI PVPU_HV1RH VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-72 (PV22 ISOLATE) (HI PVPU_HV1S1 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-39 (RF/HAT ISOLATE) ( PVPU_HV1Z2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-59 (SF162 ISOLATE) (HI PVPU_SIVCZ VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  6-40 (Z2/CDC-Z34 ISOLAT PVPX_HV2D2 VPU PROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 21-78 (SIV(CPZ)) (CIV) PVRNA_BSMV VPX PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 42-85 (ISOLATE D205,7) (H PVS05_ROTS1 ALPHA-A PROTEIN BARLEY STRIPE MOSAIC VIRUS (BSMV) 40-74 857-898 PVS06_ROTBS NONSTRUCTURAL PROTEIN NCVP2 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 248-287 PVS06_ROTGA VP6 PROTEIN BOVINE ROTAVIRUS  6-44 (GROUP C/STRAIN SHINTOKU) PVS06_ROTGI VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV)  69-144 (ADULT DIARRHEA ROTA PVS06_ROTHC VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN IDIR) 24-58  64-103 PVS06_ROTPC VP6 PROTEIN HUMAN ROTAVIRUS  9-43 (GROUP C/STRAIN BRISTOL) PVS07_ROTBJ VP6 PROTEIN PORCINE ROTAVIRUS  9-43 (GROUP C/STRAIN COWDEN) PVS07_ROTBU GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN KN-4)  2-36 282-320 PVS07_ROTP5 NONSTRUCTURAL PROTEIN NCVP3 BOVINE ROTAVIRUS (STRAIN UK)  88-153 199-236 PVS07_ROTS1 NONSTRUCTURAL PROTEIN NCVP3 PORCINE ROTAVIRUS  88-162 202-236 (SEROTYPE 5/STRAIN OSU) PVS08_ROTBU NONSTRUCTURAL PROTEIN NCVP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11)  88-153 199-236 PVS08_ROTS1 NONSTRUCTURAL PROTEIN NS2/VP9 BOVINE ROTAVIRUS (STRAIN UK)  2-70  75-119 160-226 PVS09_ROTB4 NONSTRUCTURAL PROTEIN NCVP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11)  2-46 144-212 217-255 PVS09_ROTB5 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS  2-54 282-320 (SEROTYPE 6/STRAIN B641) PVS09_ROTB6 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN A5)  2-43 282-320 PVS09_ROTBA GLYCOPROTEIN VP7 BOVINE ROTAVIRUS  2-54 282-320 (SEROTYPE 6/STRAIN 61A) PVS09_ROTBB GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN A44)  2-54 282-320 PVS09_ROTBK GLYCOPROTEIN VP7 BOVINE ROTAVIRUS  2-54 282-320 (SEROTYPE 10/STRAIN B223) PVS09_ROTBN GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN KK3)  2-54 282-320 PVS09_ROTBT GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN NCDV)  2-54 282-320 PVS09_ROTBU GLYCOPROTEIN VP7 BOVINE ROTAVIRUS  2-43 282-320 (SEROTYPE 1/STRAIN T449) PVS09_ROTC7 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN UK)  2-54 282-320 PVS09_ROTEL GLYCOPROTEIN VP7 CHICKEN ROTAVIRUS A 285-326 (SEROTYPE 7/STRAIN CH2) PVS09_ROTGA GLYCOPROTEIN VP7 EQUINE ROTAVIRUS (STRAIN L338) 282-320 PVS09_ROTGI GLYCOPROTEIN VP7 PRECURSOR ROTAVIRUS (GROUP B/STRAIN ADRV) 43-77 (ADULT DIARRHEA ROTA PVS09_ROTH4 GLYCOPROTEIN VP7 PRECURSOR ROTAVIRUS (GROUP B/STRAIN IDIR) 45-79 PVS09_ROTH9 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS  2-43 282-320 (SEROTYPE 4/STRAIN RV-4) PVS09_ROTHA GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE G/STRAIN RK9) PVS09_ROTHB GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN HU5) PVS09_ROTHD GLYCOPROTEIN VP7 HUMAN ROTAVIRUS  2-43 282-320 (SEROTYPE G/STRAIN B37) PVS09_ROTHH GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN DS1) PVS09_ROTHL GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN HN126) PVS09_ROTHM GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (STRAIN L26)  1-35 282-320 PVS09_ROTHO GLYCOPROTEIN VP7 HUMAN ROTAVIRUS  2-43 282-320 (SEROTYPE 1/STRAIN M37) PVS09_ROTHP GLYCOPROTEIN VP7 HUMAN ROTAVIRUS  2-43 282-320 (SEROTYPE 1/STRAIN MO AND STRAIN D) PVS09_ROTHR GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 3/STRAIN P) PVS09_ROTHS GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 3/STRAIN RRV) PVS09_ROTHT GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN S2) PVS09_ROTHV GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 18-56 208-242 282-320 (SEROTYPE 4/STRAIN ST. THOMAS 3) PVS09_ROTHW GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 18-56 208-242 282-320 (SEROTYPE 4/STRAIN VA70) PVS09_ROTP2 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS  2-43 282-320 (SEROTYPE 1/STRAIN WA) PVS09_ROTP3 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE 3/STRAIN AT/76) PVS09_ROTP4 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE 3/STRAIN CRW-8) PVS09_ROTP5 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS  2-56 208-242 282-320 (SEROTYPE 4/STRAIN OSU) PVS09_ROTP6 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE 5/STRAIN OSU) PVS09_ROTPB GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE 5/STRAIN TFR-41) PVS09_ROTPK GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 18-56 208-242 282-320 (SEROTYPE 4/STRAIN BEN-144) PVS09_ROTPM GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (STRAIN K) 18-56 282-320 PVS09_ROTPY GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 18-56 208-242 282-320 (SEROTYPE 4/STRAIN BMI-1) PVS09_ROTRH GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (STRAIN YM)  1-35 282-320 PVS09_ROTS1 GLYCOPROTEIN VP7 RHESUS ROTAVIRUS 282-320 PVS10_ROTBN GLYCOPROTEIN VP7 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 282-320 PVS10_ROTBS NONSTRUCTURAL GLYCOPROTEIN NCVP5 BOVINE ROTAVIRUS (STRAIN NCDV)  73-161 PVS10_ROTBU MINOR OUTER CAPSID PROTEIN BOVINE ROTAVIRUS 17-58 (GROUP C/STRAIN SHINTOKU) PVS10_ROTH2 NONSTRUCTURAL GLYCOPROTEIN NCVP5 BOVINE ROTAVIRUS (STRAIN UK)  73-161 PVS10_ROTH7 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (STRAIN A28)  73-162 PVS10_ROTH8 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (STRAIN A64/CLONE 2)  73-162 PVS10_ROTHC NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (STRAIN A64/CLONE 6)  73-162 PVS10_ROTHW MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 121-158 (GROUP C/STRAIN BRISTOL) PVS10_ROTS1 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS  73-136 (SEROTYPE 1/STRAIN WA) PVS11_ROTGA NONSTRUCTURAL GLYCOPROTEIN NCVP5 SIMIAN 11 ROTAVIRUS (STRAIN SA11)  73-162 PVS11_ROTGI NONSTRUCTURAL PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV) 24-65  96-130 (ADULT DIARRHEA ROTA PVS11_ROTH5 NONSTRUCTURAL PROTEIN ROTAVIRUS (GROUP B/STRAIN IDIR)  9-68 PVS11_ROTH6 MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 100-145 (SEROTYPE 2/STRAIN RV-5) PVS11_ROTHB MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 107-144 (SEROTYPE 1/STRAIN 69M) PVS11_ROTHD MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 107-144 (SEROTYPE G/STRAIN B37) PVS11_ROTHW MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 111-145 (SEROTYPE 2/STRAIN DS1) PVS11_ROTS1 MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 111-145 (SEROTYPE 1/STRAIN WA) PVS48_TBRVC MINOR OUTER CAPSID PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 111-145 PVSH_MUMP1 SATELLITE RNA 48 KD PROTEIN TOMATO BLACK RING VIRUS 217-265 (STRAIN C) (TBRV) PVSH_MUMP2 SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN SBL-1),  9-46 AND MUMPS VIRUS (STRAIN SBL) PVSH_MUMP4 SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN EDINGBURGH 2), 13-47 AND (STRAIN EDINGB PVSH_MUMPA SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN EDINGBURGH 4) 13-47 PVSH_MUMPB SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN MATSUYAMA) 13-51 PVSH_MUMPE SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN BELFAST) 13-52 PVSH_MUMPJ SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN ENDERS)  9-46 PVSH_MUMPK SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN JERYL-LYNN)  9-46 PVSH_MUMPL SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN KILHAM)  9-51 PVSH_MUMPM SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN BRISTOL 1) 13-55 PVSH_MUMPT SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 17-51 PVSH_MUMPU SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN TAKAHASHI) 13-47 PVSI1_REOVD SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS 13-47 (STRAIN URABE VACCINE AM9) PVSI1_REOVJ SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 3/STRAIN DEARING)  8-122 127-175 222-259 PVSI1_REOVL SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 2/STRAIN D5/JONES)  1-178 PVSI2_REOVD SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 1/STRAIN LANG)  3-107 112-198 PVSI2_REOVL SIGMA 2 PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 350-384 PVSIS_REOVD SIGMA 2 PROTEIN REOVIRUS (TYPE 1/STRAIN LANG) 350-384 PVSIS_REOVJ SIGMA 1-S PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING)  85-119 PVST2_HEVBU SIGMA 1-S PROTEIN REOVIRUS (TYPE 2/STRAIN D5/JONES)  7-45 PVST2_HEVME STRUCTURAL PROTEIN 2 PRECURSOR HEPATITIS E VIRUS (STRAIN BURMA) (HEV) 318-352 PVST2_HEVMY STRUCTURAL PROTEIN 2 PRECURSOR HEPATITIS E VIRUS (STRAIN MEXICO) (HEV) 317-351 PVST2_HEVPA STRUCTURAL PROTEIN 2 PRECURSOR HEPATITIS E VIRUS (STRAIN MYANMAR) (HEV) 318-352 PVST2_HEVRH STRUCTURAL PROTEIN 2 PRECURSOR HEPATITIS E VIRUS (STRAIN PAKISTAN) (HEV) 318-352 PVT3A_CAPVI STRUCTURAL PROTEIN 2 HEPATITIS E VIRUS (ISOLATE RHESUS) (HEV) 186-220 PVT4_CAPVI PROTEIN T3A CAPRIPOXVIRUS (STRAIN INS-1) 120-158 PVT4_CAPVK T4 PROTEIN CAPRIPOXVIRUS (STRAIN INS-1)  86-120 PVTER_EBV T4 PROTEIN CAPRIPOXVIRUS (STRAIN KS-1)  86-120 PVTER_HCMVA PROBABLE DNA PACKAGING PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 235-290 595-629 (HUMAN HERPESVIRUS 4) PVTER_HSV6U PROBABLE DNA PACKAGING PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 417-451 617-658 PVTER_HSVEB PROBABLE DNA PACKAGING PROTEIN HERPES SIMPLEX VIRUS 468-502 (TYPE 6/STRAIN UGANDA-1102) PVTER_HSVI1 PROBABLE DNA PACKAGING PROTEIN EQUINE HERPESVIRUS TYPE 1 11-45 (STRAIN AB4P) (EHV-1) PVTER_HSVSA PROBABLE DNA PACKAGING PROTEIN ICTALURID HERPESVIRUS 1  98-136 698-744 (CHANNEL CATFISH VIRUS) (CCV) PVTER_VZVD PROBABLE DNA PACKAGING PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 226-267 PVV_PI4HA PROBABLE DNA PACKAGING PROTEIN VARICELLA-ZOSTER VIRUS 588-622 (STRAIN DUMAS) (VZV) PVY1_SEND6 V PROTEIN HUMAN PARAINFLUENZA 4A VIRUS  4-38 (STRAIN TOSHIBA) (PIV-4A) PY101_SSV1 Y1 PROTEIN SENDAI VIRUS (STRAIN 6/94) 104-138 PY108_SSV1 HYPOTHETICAL 10.1 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARITCLE SSV1 16-80 PY110_SSV1 HYPOTHETICAL 10.8 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARITCLE SSV1  4-65 PY119_SSV1 HYPOTHETICAL 11.0 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARITCLE SSV1 55-59 PY11K_TYDVA HYPOTHETICAL 11.9 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARITCLE SSV1 30-96 PY12K_FCVC6 HYPOTHETICAL 11.2 KD PROTEIN TOBACCO YELLOW DWARF VIRUS 63-87 (STRAIN AUSTRALIA) (TYDV) PY12K_FCVF9 HYPOTHETICAL 12.2 KD PROTEIN FELINE CALICIVIRUS  4-38 IN COAT PROTEIN (STRAIN CF1/68 FIV) (FCV) PY12K_RHDV HYPOTHETICAL 12.1 KD PROTEIN FELINE CALICIVIRUS  4-38 IN COAT PROTEIN (STRAIN F9) (FCV) PY12K_RHDV3 HYPOTHETICAL 12.7 KD PROTEIN RABBIT HEMORRHAGIC DISEASE VIRUS 13-50 IN COAT PROTEI (RHDV) PY13K_CLVK HYPOTHETICAL 12.7 KD PROTEIN RABBIT HEMORRHAGIC DISEASE VIRUS 13-50 IN COAT PROTEIN (STRAIN V-351) (RHDV) PY13K_CLVN HYPOTHETICAL 13.1 KD PROTEIN CASSAVA LATENT VIRUS 40-77 (STRAIN WEST KENYAN 844) PY13K_NPVOP HYPOTHETICAL 13.1 KD PROTEIN CASSAVA LATENT VIRUS 43-77 (STRAIN NIGERIAN) PY13K_SSV1 HYPOTHETICAL 14.5 KD PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 16-67 IN 39 KD PROTEIN POLYHEDROSIS VIRUS PY14K_SSV1 HYPOTHETICAL 13.2 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  2-36 62-96 PY168_ADE02 HYPOTHETICAL 13.7 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  5-39 PY16K_SSV1 HYPOTHETICAL PROTEIN C-168 HUMAN ADENOVIRUS TYPE 2 119-166 PY17K_SSV1 HYPOTHETICAL 15.6 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  1-35  77-111 PY18K_SSV1 HYPOTHETICAL 17.8 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  1-45 119-153 PY20K_SSV1 HYPOTHETICAL 18.0 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 102-136 PY28K_SSV1 HYPOTHETICAL 20.4 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  73-107 PY2_SOCMV HYPOTHETICAL 28.5 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 127-180 PY31K_SSV1 HYPOTHETICAL PROTEIN 2 SOYBEAN CHLOROTIC MOTTLE VIRUS 117-154 PY32K_SSV1 HYPOTHETICAL 31.5 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  7-97 100-141 PY38K_NPVAC HYPOTHETICAL 31.7 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 230-278 PY3_SOCMV HYPOTHETICAL 37.7 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 133-241 POLYHEDROSIS VIRUS ( PY5K9_SSV1 HYPOTHETICAL PROTEIN 3 SOYBEAN CHLOROTIC MOTTLE VIRUS 115-149 PY7_SOCMV HYPOTHETICAL 5.9 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  1-51 PY85K_SSV1 HYPOTHETICAL PROTEIN 7 SOYBEAN CHLOROTIC MOTTLE VIRUS 56-94 PY8_SOCMV HYPOTHETICAL 85.7 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  81-125 503-537 546-587 658-700 PYB01_FOWPM HYPOTHETICAL PROTEIN 8 SOYBEAN CHLOROTIC MOTTLE VIRUS 46-83 PYB04_FOWPM HYPOTHETICAL BAMHI-ORF1 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH])  74-115 184-221 PYB05_FOWPM HYPOTHETICAL BAMHI-ORF4 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 29-70 PYB06_FOWPM HYPOTHETICAL BAMHI-ORF5 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH])  3-37 61-95 PYB07_FOWPM HYPOTHETICAL BAMHI-ORF6 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 115-149 PYB10_FOWPM HYPOTHETICAL BAMHI-ORF7 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 344-378 PYB12_FOWPM HYPOTHETICAL BAMHI-ORF10 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 162-253 PYB13_FOWPM HYPOTHETICAL BAMHI-ORF12 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH])  4-47 117-153 PYBL2_EBV HYPOTHETICAL BAMHI-ORF13 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 122-163 PYDH1_HSVS7 HYPOTHETICAL BBLF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 458-506 (HUMAN HERPESVIRUS 4) PYF30_FOWP1 HYPOTHETICAL 24.1 KD PROTEIN IN HERPESVIRUS SAIMIRI (STRAIN 484-77) 147-188 DHFR 3′REGION PYGA1_HSVMB HYPOTHETICAL 30.9 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 160-204 PYGA1_HSVMM HYPOTHETICAL 23.6 KD PROTEIN MAREK'S DISEASE HERPESVIRUS 176-211 IN GLYCOPROTEI (STRAIN BC-1) (MDHV) PYH22_VACCV HYPOTHETICAL 23.6 KD PROTEIN MAREK'S DISEASE HERPESVIRUS 176-211 IN GLYCOPROTEI (STRAIN MD5) (MDHV) PYHR3_VACCV HYPOTHETICAL 21.7 KD HINDIII-C VACCINIA VIRUS (STRAIN WR) 34-78  95-139 PROTEIN PYKR4_EBV HYPOTHETICAL HOST RANGE 27.4 KD VACCINIA VIRUS (STRAIN WR) 24-58 181-222 PROTEIN PYL15_ADE41 HYPOTHETICAL BKRF4 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 16-58 (HUMAN HERPESVIRUS 4) PYLR2_EBV HYPOTHETICAL 12.4 KD PROTEIN IN HUMAN ADENOVIRUS TYPE 41 39-81 33 KD PROTEIN PYOR1_COYMV HYPOTHETICAL BLRF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8)  64-125 (HUMAN HERPESVIRUS 4) PYOR2_COYMV HYPOTHETICAL 23 KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS  94-147 (COYMV) PYOR2_LELV HYPOTHETICAL 15 KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS 33-77 (COYMV) PYOR3_TTV1 HYPOTHETICAL 28.4 KD PROTEIN LELYSTAD VIRUS (LV) 100-134 PYOR5_ADEG1 HYPOTHETICAL 6.9 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 14-54 (STRAIN KRA1) (TTV1) PYORA_TTV1 HYPOTHETICAL 31.5 KD PROTEIN AVIAN ADENOVIRUS GAL1  70-127 (STRAIN PHELPS) (FOWL ADENOVIRU PYORD_TTV1 HYPOTHETICAL 8.1 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 21-67 (STRAIN KRA1) (TTV1) PYORE_TTV1 HYPOTHETICAL 15.4 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1  6-51  89-130 (STRAIN KRA1) (TTV1) PYORL_TTV1 HYPOTHETICAL 15.3 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1  78-122 (STRAIN KRA1) (TTV1) PYORQ_TTV1 HYPOTHETICAL 26.8 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1  1-45 (STRAIN KRA1) (TTV1) PYORT_TTV1 HYPOTHETICAL 7.3 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1  1-43 (STRAIN KRA1) (TTV1) PYORW_TTV1 HYPOTHETICAL 38.7 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1  4-38 281-315 (STRAIN KRA1) (TTV1) PYP12_RTBV HYPOTHETICAL 12.1 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1  4-89 (STRAIN KRA1) (TTV1) PYP12_RTBVP HYPOTHETICAL P12 PROTEIN RICE TUNGRO BACILLIFORM VIRUS (RTBV) 33-72 PYP24_RTBV HYPOTHETICAL P12 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 33-72 (ISOLATE PHILIPPINES) (RTE PYP24_RTBVP HYPOTHETICAL P24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS (RTBV)  51-101 106-157 PYP46_RTBV HYPOTHETICAL P24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS  51-101 106-157 (ISOLATE PHILIPPINES) (RT PYP46_RTBVP HYPOTHETICAL P46 PROTEIN RICE TUNGRO BACILLIFORM VIRUS (RTBV)  49-111 197-231 PYP63_NPVAC HYPOTHETICAL P46 PROTEIN RICE TUNGRO BACILLIFORM VIRUS  49-111 197-231 (ISOLATE PHILIPPINES) (RT PYP7A_TNVA HYPOTHETICAL PROTEIN IN P6.5 5′REGION AUTOGRAPHA CALIFORNICA NUCLEAR 32-73 POLYHEDROSIS VIRUS ( PYPOH_NPVAC HYPOTHETICAL P7A PROTEIN TOBACCO NECROSIS VIRUS (STRAIN A) (TNV)  1-65 PYPOL_IPNVJ HYPOTHETICAL 23.6 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 116-153 IN POLYHEDRIN 5 POLYHEDROSIS VIRUS ( PYQ1_AMEPV HYPOTHETICAL 17.3 KD PROTEIN INFECTIOUS PANCREATIC NECROSIS VIRUS 25-66 (SEROTYPE JASPER) PYQ3_AMEPV HYPOTHETICAL 7.6 KD PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV)  9-61 IN TK 5′REGION PYRF2_HSV6G HYPOTHETICAL PROTEIN IN TK 3′REGION AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV)  1-57 62-96 149-183 PYRF3_HSV6G HYPOTHETICAL PROTEIN RF2 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 193-264 PYRF4_HSV6G HYPOTHETICAL PROTEIN RF3 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 134-175 PYRP2_IRV6 HYPOTHETICAL PROTEIN RF4 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 252-286 404-442 PYRR1_EBV REPETITIVE PROTEIN ORF2 CHILO IRIDESCENT VIRUS (CIV)  1-45 (INSECT IRIDESCENT VIRUS TYP PYSR1_EBV HYPOTHETICAL BRRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8)  96-130 (HUMAN HERPESVIRUS 4) PYTR1_EBV HYPOTHETICAL BSRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8)  98-177 (HUMAN HERPESVIRUS 4) PYUB2_NPVOP HYPOTHETICAL BTRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 390-424 (HUMAN HERPESVIRUS 4) PYVAC_VACCC HYPOTHETICAL 24.0 KD PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 25-69 170-204 IN UBIQUITIN 3′RE POLYHEDROSIS VIRUS PYVAG_VACCC HYPOTHETICAL 14.4 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 29-63 PYVAH_VACCC HYPOTHETICAL 9.3 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  3-37 PYVAN_VACCC HYPOTHETICAL 14.5 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  78-112 PYVBH_VACCC HYPOTHETICAL 7.9 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 23-57 PYVCC_VACCC HYPOTHETICAL 7.4 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  5-39 PYVDB_VACCC HYPOTHETICAL 9.2 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 11-48 PYVDB_VACCV HYPOTHETICAL 8.5 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 29-80 PYVDC_VACCV HYPOTHETICAL 8.5 KD PROTEIN VACCINIA VIRUS (STRAIN WR) 46-80 PYVGB_VACCC HYPOTHETICAL 7.3 KD PROTEIN VACCINIA VIRUS (STRAIN WR)  7-41 PYVHA_VACCC HYPOTHETICAL 8.4 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 10-51 HYPOTHETICAL 8.1 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  9-53

TABLE VI 107 X 178 X 4 SEARCH MOTIF RESULTS SUMMARY FOR ALL VIRAL (NON-BACTERIOPHAGE) PROTEINS PCGENE 107x178x4 All Viruses (no bacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 AREA 9 P194K_TRVSY POT 194 KD PRO TOBACCO RATTLE VIRUS (STRAIN SYM) 387-414 1087- 1142- 1114 1169 PAANT_HDVAM DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAANT_HDVD3 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAANT_HDVIT DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAANT_HDVM2 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAANT_HDVS1 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 16-43 106-133 PAANT_HDVS2 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 16-43 106-133 PAANT_HDVWO DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAT3H_FOWPM ANTITHROMBIN-III HOMOLOG FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 72-106 PAT11_VACCV 94 KD A-TYPE INCLUSION PRO VACCINIA VIRUS (STRAIN WR) 14-56 67-94 424-472 570-625 PAT11_VARV 81 KD A-TYPE INCLUSION PRO VARIOLA VIRUS 67-94 425-504 571-605 PAT12_HSVI1 ALPHA TRANS-IND FACTOR 78 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 308-335 KD PRO PAT12_HSVIF ALPHA TRANS-IND FACTOR 77 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F) 308-335 KD PRO PAT12_HSVEB ALPHA TRANS-IND FACTOR 82 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 294-321 KD PRO PATIN_HSVEB ALPHA TRANS-IND PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 255-289 PATI_COWPX A-TYPE INCLUSION PROTEIN COWPOX VIRUS 14-56 67-94 426-498 572-620 837-841 934-990 1234- 1261 PBZLF_EBV BZLF1 TRANS-ACTIVATOR EPSTEIN-BARR VIRUS (STRAIN B95-8) 193-220 PROTEIN PCAHH_VACCC CELL SURFACE-BINDING VACCINIA VIRUS (STRAIN COPENHAGEN) 84-111 117-144 PROTEIN PCAHH_VACCV CELL SURFACE-BINDING VACCINIA VIRUS (STRAIN WR) 84-111 117-144 PROTEIN PCAHH_VARV CELL SURFACE-BINDING VARIOLA VIRUS 84-111 117-144 PROTEIN PCELF_HSVEB CELL FUSION PROTEIN EQUINE HERPESVIRUS TYPE 1 312-339 PRECURSOR (STRAINS AB4P and Ky A) PCGH2_HSVSA CYCLIN HOMOLOG HERPESVIRUS SAIMIRI (STRAIN 11) 127-154 PCOA1_POVHA COAT PROTEIN VP1 HAMSTER POLYOMAVIRUS 159-186 PCOA2_BFDV COAT PROTEIN VP2 BUDGERIGAR FLEDGLING DISEASE VIRUS 160-187 PCOA2_POVBO COAT PROTEIN VP2 BOVINE POLYOMAVIRUS 49-76 PCOA2-POVJC COAT PROTEIN VP2 POLYOMAVIRUS JC 37-64 PCOA2_POVLY COAT PROTEIN VP2 LYMPHOTROPIC POLYOMAVIRUS 170-204 PCOA2_POVMK COAT PROTEIN VP2 MOUSE POLYOMAVIRUS (STRAIN KILHAM) 22-49 PCOA2_SV40 COAT PROTEIN VP2 SIMIAN VIRUS 40 178-205 PCOA3_AAV2 PROBABLE COAT PROTEIN 3 ADENO-ASSOCIATED VIRUS 2 120-147 PCOA3-TTV1 COAT PROTEIN TP3 THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 3-30 PCOAT_ADVG COAT PROTEIN VP1 ALEUTIAN MINK DISEASE PARVOVIRUS 194-221 (STRAIN G) PCOAT_BLRV COAT PROTEIN BEAN LEAFROLL VIRUS 96-123 PCOAT_CAMVC COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-184) 63-90 193-220 461-488 PCOAT_CAMVD COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 64-91 194-221 PCOAT_CAMVE COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC) 63-90 193-220 PCOAT_CAMVN COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153) 63-90 192-219 461-488 PCOAT_CAMVS COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN 64-91 194-221 STRASBOURG) PCOAT_CARMV COAT PROTEIN CARNATION MOTTLE VIRUS 16-43 PCOAT_CHVP1 MAJOR CAPSID PROTEIN PARAMECIUM BURSARIA CHLORELLA VIRUS 1 41-86 PCOAT_CNV COAT PROTEIN CUCUMBER NECROSIS VIRUS 328-362 PCOAT_CSMV COAT PROTEIN CHLORIS STRIATE MOSAIC VIRUS 62-89 PCOAT_CYMV COAT PROTEIN CLOVER YELLOW MOSAIC VIRUS 170-200 PCOAT_FCVC6 COAT PROTEIN FELINE CALICIVIRUS (STRAIN CFI/68 FIV) 566-600 PCOAT_FCVF4 COAT PROTEIN FELINE CALICIVIRUS (STRAIN JAPANESE F4) 516-543 566-600 PCOAT_FCVF9 COAT PROTEIN FELINE CALICIVIRUS (STRAIN F9) 519-546 569-603 PCOAT_FMVD PROBABLE COAT PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 220-247 358-385 PCOAT_LSV COAT PROTEIN LILY SYMPTOMLESS VIRUS 32-700 246-273 PCOAT_MISV COAT PROTEIN MISCANTHUS STREAK VIRUS 139-166 PCOAT_ORSV COAT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS 106-133 PCOAT_PAVHB PROBABLE COAT PROTEIN VP1 HUMAN PARVOVIRUS B19 524-551 569-596 PCOAT_POPMV COAT PROTEIN POPLAR MOSAIC VIRUS (ISOLATE ATCC PV275) 46-73 PCOAT_SOCMV COAT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 128-162 PCOAT_TAMV GENOME POLYPROTEIN TAMARILLO MOSAIC VIRUS 21-48 PCOAT_TAV COAT PROTEIN TOMATO ASPERMY VIRUS 23-50 PCOAT_TBSVB COAT PROTEIN TOMATO BUSHY STUNT VIRUS (STRAIN BS-3) 3-30 41-68 PCOAT_TBSVC COAT PROTEIN TOMATO BUSHY STUNT VIRUS (STRAIN CHERRY) 97-134 PCOAT_TCV COAT PROTEIN TURNIP CRINKLE VIRUS 232-259 PCOAT_TMGMV COAT PROTEIN TOBACCO MILD GREEN MOSAIC VIRUS 104-131 PCOAT_TMV COAT PROTEIN TOBACCO MOSAIC VIRUS (VULGARE) 104-131 PCOAT_TMVCO COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN COWPEA) 78-132 PCOAT_TMVDA COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN DAHLEMENSE) 104-131 PCOAT_TMVER COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN ER) 104-131 PCOAT_TMVO COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN O AND KOKUBU) 104-131 PCOAT_TMVOM COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN OM) 104-131 PCOAT_TMVTO COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN TOMATO/L) 104-131 PCOAT_TNVA COAT PROTEIN TOBACCO NECROSIS VIRUS (STRAIN A) 90-117 PCOAT_TRVPS COAT PROTEIN TOBACCO RATTLE VIRUS (STRAINS PSG and PLB) 118-145 PCOAT_TYDVA COAT PROTEIN TOBACCO YELLOW DWARF VIRUS (STRAIN 10-37 AUSTRALIA) PCOAT_TYMV COAT PROTEIN TURNIP YELLOW MOSAIC VIRUS 41-68 PCOAT_TYMVA COAT PROTEIN TURNIP YELLOW MOSAIC VIRUS (AUSTRALIAN 41-68 ISOLATE) PDNB2_ADE07 EARLY E2A DNA-BINDING HUMAN ADENOVIRUS TYPE 7 46-73 PROTEIN PDNB1_EBV MAJOR DNA-BINDING PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 977-1004 1041- 1068 PDNB1_HCMVA MAJOR DNA-BINDING PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 437-464 PDNB1_HSVSA MAJOR DNA-BINDING PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 333-368 512-539 PDNBI_MCMVS MAJOR DNA-BINDING PROTEIN MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 584-618 PDNBI_POVJC DNA-BINDING PROTEIN POLYOMAVIRUS JC 2-29 PDNBI_SCMVC MAJOR DNA-BINDING PROTEIN SIMIAN CYTOMEGALOVIRUS (STRAIN COLBURN) 435-462 532-559 PDNLI_VACCC DNA LIGASE VACCINIA VIRUS (STRAIN COPENHAGEN) 104-131 172-199 358-385 PDNLI_VACCV DNA LIGASE VACCINIA VIRUS (STRAIN WR) 104-131 172-199 358-385 PDNLI_VARV DNA LIGASE VARIOLA VIRUS 104-131 172-199 358-385 PDPOL_ADE12 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 12 403-431 PDPOL_CBEPV DNA POLYMERASE CHORISTONEURA BIENNIS ENTOMOPOXVIRUS 23-64 202-240 PDPOL_CHVN2 DNA POLYMERASE CHLORELLA VIRUS NY-2A 338-365 PDPOL_CHVP1 DNA POLYMERASE PARAMECIUM BURSARIA CHLORELLA VIRUS 1 338-365 PDPOL_FOWPV DNA POLYMERASE FOWLPOX VIRUS 17-51 370-416 621-655 772-799 PDPOL_HCMVA DNA POLYMERASE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 753-780 PDPOL_HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS (BROWN SHANGHAI 5-39 DUCK ISOLATE S5) PDPOL_HPBDC DNA POLYMERASE DUCK HEPATITIS B VIRUS (STRAIN CHINA) 5-39 PDPOL_HPBDW DNA POLYMERASE DUCK HEPATITIS B VIRUS (WHITE SHANGHAI 5-39 304-331 DUCK ISOLATE S31) PDPOL_HPBGS DNA POLYMERASE GROUND SQUIRREL HEPATITIS VIRUS 271-325 PDPOL_HPBHE DNA POLYMERASE HERON HEPATITIS B VIRUS 5-39 PDPOL_HPBVP DNA POLYMERASE HEPATITIS B VIRUS 456-483 (SUBTYPE ADW/STRAIN PHILIPPINO/PFDW294) PDPOL_HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE ADYW) 443-470 PDPOL_HSVI1 DNA POLYMERASE ICTALURID HERPESVIRUS 1 328-366 710-737 PDPOL_HSVSA DNA POLYMERASE HERPESVIRUS SAIMIRI (STRAIN 11) 625-652 PDPOL_NPVAC DNA POLYMERASE AUTOGRAPHA CALIFORNICA NUCLEAR 598-643 POLYHEDROSIS VIRUS PDPOL_NPVLD DNA POLYMERASE LYMANTRIA DISPAR MULTICAPSID NUCLEAR 357-384 POLYHEDROSIS VIRUS PDPOL_VACCC DNA POLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN) 770-797 PDPOL_VACCV DNA POLYMERASE VACCINIA VIRUS (STRAIN WR) 770-797 PDPOL_VARV DNA POLYMERASE VARIOLA VIRUS 769-796 PDPOL_WHV1 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 1 285-326 PDPOL_WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 59 290-331 PDPOL_WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 7 212-242 290-331 PDPOL_WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 211-241 289-330 PDPOL_WHV81 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 212-242 290-331 PDTXH_CORBE DIPHTH TOXIN HOMOLOG CORYNEPHAGE BETA 516-533 CRM228 PREC PDTX_CORBE DIPHTHERIA TOXIN PRECURSOR CORYNEPHAGE BETA 523-560 PDTX_COROM DIPHTHERIA TOXIN PRECURSOR CORYNEPHAGE OMEGA 516-533 PDUT_HSVE4 DEOXYU 5′-TRIPHOSPH EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 90-117 NUCHYDROLASE PDUT_HSVSA DEOXYU 5′-TRIPHOSPH HERPESVIRUS SAIMIRI (STRAIN 11) 179-213 NUCHYDROLASE PE1BL_ADE07 E1B PROTEIN, LARGE HUMAN ADENOVIRUS TYPE 7 126-153 T-ANTIGEN PE1BL_ADE40 E1B PROTEIN, LARGE HUMAN ADENOVIRUS TYPE 40 136-163 T-ANTIGEN PE1BS_ADE12 E1B PROTEIN, SMALL HUMAN ADENOVIRUS TYPE 12 3-30 T-ANTIGEN PE1BS_ADEM1 E1B PROTEIN, SMALL MOUSE ADENOVIRUS TYPE 1 122-173 T-ANTIGEN PE314_ADE02 EARLY E3B 14 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 2-29 PE314_ADE07 EARYL E3 15.3 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 21-48 PE320_ADE03 EARLY E3 20.1 KD HUMAN ADENOVIRUS TYPE 3 5-32 70-100 GLYCOPROTEIN PE320_ADE35 EARLY E3 20.3 KD HUMAN ADENOVIRUS TYPE 35 70-107 GLYCOPROTEIN PE321_ADE35 EARLY E3 20.6 KD HUMAN ADENOVIRUS TYPE 35 125-161 GLYCOPROTEIN PE3GL_ADEM1 EARLY E3 17.7 KD MOUSE ADENOVIRUS TYPE 1 38-66 GLYCOPROTEIN PEAR_EBV EARLY ANTIGEN PROTEIN R EPSTEIN-BARR VIRUS (STRAIN B95-8) 55-82 PEFT1_VARV EARLY TRANS FACTOR 70 KD VARIOLA VIRUS 307-341 470-497 SUBUNIT PENV_AVIRE ENV POLYPROTEIN AVIAN RETICULOENDOTHELIOSIS VIRUS 420-468 PENV_AVISN ENV POLYPROTEIN AVIAN SPLEEN NECROSIS VIRUS 6-33 426-474 PENV_BAEVM ENV POLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 395-452 PENV_BIV06 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 17-44 544-603 631-695 (ISOLATE 106) PENV_BIV27 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 17-44 573-632 660-724 (ISOLATE 127) PENV_BLVAF ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (AMERICAN 304-377 ISOLATE FLK) PENV_BLVAU ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (AUSTRALIAN 304-377 ISOLATE) PENV_BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (AMERICAN 304-377 ISOLATE VDM) PENV_BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (BELGIUM 311-377 ISOLATE LB285) PENV_BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (BELGIUM 304-377 ISOLATE LB59) PENV_BLVJ ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (JAPANESE 304-377 ISOLATE BLV-1) PENV_CAEVG ENV POLYPROTEIN CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 165-192 (STRAIN G63) PENV_EIAV1 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (CLONE P3.2-1) PENV_EIAV2 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-695 (CLONE P3.2-2) PENV_EIAV3 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (CLONE P3.2-3) PENV_EIAV5 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 669-696 (CLONE P3.2-5) PENV_EIAV9 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (CLONE 1369) PENV_EIAVC ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (CLONE CL22) PENV_EIAVW ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (STRAIN WSU5) PENV_EIAVY ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (ISOLATE WYOMING) PENV_FENV1 ENV POLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1 33-60 517-544 PENV_FIVPE ENV POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS (ISOLATE 650-680 722-749 PETALUMA) PENV_FIVSD ENV POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS (ISOLATE 639-668 720-747 SAN DIEGO) PENV_FIVT2 ENV POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS (ISOLATE 640-679 721-748 TM2) PENV_FLVC6 ENV POLYPROTEIN FELINE LEUKEMIA PROVIRUS (CLONE CFE-6) 509-538 PENV_FLVGL ENV POLYPROTEIN FELINE LEUKEMIA VIRUS (STRAIN A/GLASGOW-1) 490-519 PENV_FLVLB ENV POLYPROTEIN FELINE LEUKEMIA VIRUS (STRAIN LAMBDA-B1) 510-539 PENV_FLVSA ENV POLYPROTEIN FELINE LEUKEMIA VIRUS (STRAIN SARMA) 487-516 PENV_FOAMV ENV POLYPROTEIN HUMAN SPUMARETROVIRUS 14-41 318-355 866-893 PENV_FSVGA ENV POLYPROTEIN FELINE SARCOMA VIRUS (STRAIN 510-539 GARDNER-ARNSTEIN) PENV_FSVGB ENV POLYPROTEIN FELINE SARCOMA VIRUS (STRAIN GA) 490-519 PENV_FSVSM ENV POLYPROTEIN FELINE SARCOMA VIRUS (STRAIN SM) 493-522 PENV_GALV ENV POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 176-203 523-564 PENV_HTL1A ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 342-376 (STRAIN ATK) PENV_HTL1C ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 342-376 (CARIBBEAN ISOLATE) PENV_HTL1M ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 342-376 (ISOLATE MT-2) PENV_HTLV2 ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE II 336-370 PENV_HV1A2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 544-592 630-682 790-825 (ARV2/SF2 ISOLATE) PENV_HV1B1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 631-683 791-818 (BH10 ISOLATE) PENV_HV1B8 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 540-589 626-678 786-813 (BH8 ISOLATE) PENV_HV1BN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 267-294 338-365 562-590 628-679 787-815 (BRAIN ISOLATE) PENV_HV1BR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 550-599 636-688 796-823 (BRU ISOLATE) PENV_HV1C4 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 397-424 557-606 643-695 803-835 (CDC-451 ISOLATE) PENV_HV1EL ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 386-413 543-591 628-680 (ELI ISOLATE) PENV_HV1H2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 631-683 791-818 (HXB2 ISOLATE) PENV_HV1H3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 631-683 791-818 (HXB3 ISOLATE) PENV_HV1J3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 350-377 556-605 642-694 802-829 (JH3 ISOLATE) PENV_HV1JR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 336-363 622-675 783-811 (JRCSF ISOLATE) PENV_HV1KB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 274-301 555-596 637-677 776-824 (STRAIN KB-1-GP32) PENV_HV1MA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 547-595 633-707 794-826 (MAL ISOLATE) PENV_HV1MF ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 543-592 629-681 789-816 (MFA ISOLATE) PENV_HV1MN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-370 567-595 632-684 791-819 (MN ISOLATE) PENV_HV1N5 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 326-360 (NEW YORK-5 ISOLATE) PENV_HV1ND ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 249-290 536-583 621-673 783-813 (NDK ISOLATE) PENV_HV1OY ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 544-593 630-704 789-820 (OYI ISOLATE) PENV_HV1PV ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 631-683 791-818 (PV22 ISOLATE) PENV_HV1RH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 280-307 351-378 554-602 640-692 800-832 (RF/HAT ISOLATE) PENV_HV1S1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 333-363 536-585 622-674 782-809 (SF162 ISOLATE) PENV_HV1S3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 541-589 627-679 787-815 (SF33 ISOLATE) PENV_HV1SC ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 338-365 545-593 631-683 (SC ISOLATE) PENV_HV1W1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 338-365 545-593 631-683 791-818 (WMJ1 ISOLATE) PENV_HV1W2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 334-361 536-584 622-674 782-809 (WMJ2 ISOLATE) PENV_HV1Z2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 542-591 628-680 790-820 (Z2/CDC-Z34 ISOLATE) PENV_HV1Z3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 251-292 (ZAIRE 3 ISOLATE) PENV_HV1Z6 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 256-297 545-593 630-682 792-822 (ZAIRE 6 ISOLATE) PENV_HV1Z8 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 266-307 573-601 634-678 797-828 (Z-84 ISOLATE) PENV_HV1ZH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 627-666 791-823 (ZAIRE HZ321 ISOLATE) PENV_HV2BE ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 61-88 532-591 621-648 653-697 (ISOLATE BEN) PENV_HV2CA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 534-593 623-650 655-699 (ISOLATE CAM2) PENV_HV2D1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 61-88 523-550 555-582 644-688 (ISOLATE D194) PENV_HV2G1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 60-87 524-551 556-583 613-640 645-693 (ISOLATE GHANA-1) PENV_HV2NZ ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 61-88 524-551 556-583 613-640 662-689 (ISOLATE N1H-Z) PENV_HV2RO ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 58-85 533-592 622-698 (ISOLATE ROD) PENV_HV2S2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 442-476 527-554 559-586 648-682 (ISOLATE ST/24 1C#2) PENV_HV2SB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 557-584 614-673 (ISOLATE SBL1SY) PENV_HV2ST ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 442-476 527-554 559-586 648-692 (ISOLATE ST) PENV_MCFF ENV POLYPROTEIN MINK CELL FOCUS-FORMING MURINE LEUKEMIA 473-512 VIRUS PENV_MCFF3 ENV POLYPROTEIN MINK CELL FOCUS-FORMING MURINE LEUKEMIA 488-515 VIRUS (ISOLATE C1-3) PENV_MLVAV ENV POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 517-544 PENV_MLVCB ENV POLYPROTEIN CAS-BR-E MURINE LEUKEMIA VIRUS 510-539 PENV_MLVF5 ENV POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS (ISOLATE 57) 523-553 PENV_MLVFF ENV POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS (ISOLATE FB29) 523-553 PENV_MLVFP ENV POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS (ISOLATE 523-553 PVC-211) PENV_MLVHO ENV POLYPROTEIN HOMULV MURINE LEUKEMIA VIRUS 510-540 PENV_MLVK1 ENV POLYPROTEIN KIRSTEN MURINE LEUKEMIA VIRUS 40-81 PENV_MLVMO ENV POLYPROTEIN MOLONEY MURINE LEUKEMIA VIRUS 502-543 PENV_MLVRD ENV POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 497-538 PENV_MLVRK ENV POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS (STRAIN 497-538 KAPLAN) PENV_MMTVB ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 458-485 562-589 PENV_MMTVG ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 458-485 562-589 PENV_MPMV ENV POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 422-470 PENV_MSVFB ENV POLYPROTEIN FBJ MURINE OSTEOSARCOMA VIRUS 57-84 PENV_OMVVS ENV POLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV) 42-69 196-223 780-807 PENV_RMCFV ENV POLYPROTEIN RAUSCHER MINK CELL FOCUS-INDUCING VIRUS 487-517 PENV_SFV1 ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 14-41 866-901 PENV_SFV3L ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/STRAIN LK3) 18-45 319-357 673-700 863-898 PENV_SIVA1 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS (AGM155 269-310 561-588 592-619 652-679 697-724 ISOLATE) PENV_SIVAG ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS (AGM3 270-301 566-593 597-624 658-685 703-730 ISOLATE) PENV_SIVA1 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 257-291 336-372 548-603 634-708 (ISOLATE AGM/CLONE GRI-1) PENV_SIVAT ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 3-30 268-298 590-617 651-678 (TYO-1 ISOLATE) PENV_SIVCZ ENV POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 160-187 253-289 336-366 526-584 627-654 PENV_SIVGB ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 8-35 158-185 589-650 784-816 (ISOLATE GB1) PENV_SIVM1 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 120-150 550-609 671-715 (MM142-83 ISOLATE) PENV_SIVM2 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 156-215 277-289 (MM251 ISOLATE) PENV_SIVMK ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 553-608 (K6W ISOLATE) PENV_SIVML ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 549-608 (K78 ISOLATE) PENV_SIVS4 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 281-308 553-612 642-669 691-718 (F236/SMH4 ISOLATE) PENV_SIVSP ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 286-313 554-595 646-722 (PBJ/BC13 ISOLATE) PENV_SMRVH ENV POLYPROTEIN SQUIRREL MONKEY RETROVIRUS (SMRV-H) 400-462 PENV_SRV1 ENV POLYPROTEIN SIMIAN RETROVIRUS SRV-1 409-471 PENV_VILV ENV POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514) 22-62 773-800 PENV_VILV1 ENV POLYPROTEIN VISNA LENTIVIRUS 22-62 780-807 (STRAIN 1514/CLONE LV1-1KS1) PENV_VILV2 ENV POLYPROTEIN VISNA LENTIVIRUS 22-62 782-809 (STRAIN 1514/CLONE LV1-1KS2) PETF1_FOWP1 EARLY TRANS FACTOR FOWLPOX VIRUS (STRAIN FP-1) 190-224 70 KD SUBUNIT PETF1_SFVKA EARLY TRANS FACTOR SHOPE FIBROMA VIRUS (STRAIN KASZA) 306-340 469-496 550-587 70 KD SUBUNIT PETF1_VACCC EARLY TRANS FACTOR VACCINIA VIRUS (STRAIN COPENHAGEN) 307-341 470-497 70 KD SUBUNIT PETF1_VACCV EARLY TRANS FACTOR VACCINIA VIRUS (STRAIN WR) 307-341 470-497 70 KD SUBUNIT PETF2_VACCC EARLY TRANSCRIPTION VACCINIA VIRUS (STRAIN COPENHAGEN) 66-97 174-210 302-332 FACTOR 82 PETF2_VARV EARLY TRANSCRIPTION VARIOLA VIRUS 66-97 174-210 302-332 FACTOR 82 PEXON_VZVD ALKALINE EXONUCLEASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 109-139 PFIB2_ADE40 41.4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 179-237 PFIB2_ADE41 41.4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 178-216 PFIBP_ADE02 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 2 308-335 PFIBP_ADE40 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 324-351 446-473 PFIBP_ADE41 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 339-366 461-488 PFIBP_ADEB3 FIBER PROTEIN BOVINE ADENOVIRUS TYPE 3 118-145 164-191 PFIBP_ADEM1 FIBER PROTEIN MOUSE ADENOVIRUS TYPE 1 275-305 325-352 PFOSX_MSVFR V-FOS/FOX TRANSFORMING FBR MURINE OSTEOSARCOMA VIRUS 138-169 PROTEIN PFOS_AVINK P55-V-FOS TRANSFORMING AVIAN RETROVIRUS NK24 116-147 PROTEIN PFOS_MSVFB P55-V-FOS TRANSFORMING FBJ MURINE OSTEOSARCOMA VIRUS 162-193 PROTEIN PGAG_AVISN GAG POLYPROTEIN AVIAN SPLEEN NECROSIS VIRUS 270-297 PGAG_EIAVY GAG POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 144-171 (ISOLATE WYOMING) PGAG_FOAMV GAG POLYPROTEIN HUMAN SPUMARETROVIRUS 621-648 PGAG_GALV GAG POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 396-442 447-474 PGAG_HV1A2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 91-118 (ARV2/SF2 ISOLATE) PGAG_HV1J3 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 91-118 (JH3 ISOLATE) PGAG_HV1MN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-118 (MN ISOLATE) PGAG_HV2BE GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 88-115 (ISOLATE BEN) PGAG_HV2D1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 88-115 (ISOLATE D194) PGAG_HV2NZ GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 88-115 (ISOLATE NIH-Z) PGAG_HV2ST GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 88-115 (ISOLATE ST) PGAG_IPHA RETROVIRUS-RELATED GAG HAMSTER INTRACISTERNAL A-PARTICLE 270-297 POLYPROTEI PGAG_IPMA RETROVIRUS-RELATED GAG MOUSE INTRACISTERNAL A-PARTICLE 33-60 69-103 232-259 POLYPROTEI PGAG_IPMAE RETROVIRUS-RELATED GAG MOUSE INTRACISTERNAL A-PARTICLE 96-130 POLYPROTEI PGAG_MMTVB GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 84-151 156-187 PGAG_MMTVC GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN C3H) 84-116 PGAG_MMTVG GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 84-151 156-187 PGAG_MPMV GAG POLYPROTEIN SIMIAN MASON-PFIZER VIRUS (MPMV) 222-260 PGAG_SCVLA MAJOR COAT PROTEIN SACCHAROMYCES CEREVISIAE VIRUS L-A 497-531 624-651 PGAG_SIVAI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 473-507 (ISOLATE AGM/CLONE GR1-1) PGAG_SIVMK GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 88-115 (K6W ISOLATE) PGAG_SIVMS GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 88-115 (STM ISOLATE) PGAG_SIVS4 GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 88-115 (F236/SMH4 ISOLATE) PGAG_SIVSP GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 88-115 (PBJ/BC13 ISOLATE) PGAG_SMSAV GAG POLYPROTEIN SIMIAN SARCOMA VIRUS 397-443 PGAG_SRV1 GAG POLYPROTEIN SIMIAN RETROVIRUS SRV-1 223-261 PHELI_HSVEB PROBABLE HELICASE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 184-211 321-348 PHELI_HSVSA PROBABLE HELICASE HERPESVIRUS SAIMIRI (STRAIN 11) 418-449 PHELI_VZVD PROBABLE HELICASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 490-517 701-728 PHEMA_CVBF HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN F15) 208-242 PRECURSOR PHEMA_CVBLY HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN LY-138) 208-242 PRECURSOR PHEMA_CVBM HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN MEBUS) 208-242 PRECURSOR PHEMA_CVBQ HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN QUEBEC) 208-242 PRECURSOR PHEMA_CVHOC HEMAGGLUTININ-ESTERASE HUMAN CORONAVIRUS (STRAIN OC43) 208-242 PRECURSOR PHEMA_IAA1C HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/A1CH1/2/68) 387-453 PHEMA_IABAN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 24-51 371-437 A/BANGKOK/1/79) PHEMA_IABUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/BUDGERIGAR/HOKKAIDO/1/77) PHEMA_IACAO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 9-36 A/CAMEL/MONGOLIA/82) PHEMA_IACKA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/CHICKEN/ALABAMA/1/75) PHEMA_IACKG HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 31-58 382-441 494-528 A/CHICKEN/GERMANY/N/49) PHEMA_IACKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 396-426 A/CHICKEN/PENNSYLVANIA/1/83) PHEMA_IACKQ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 396-426 A/CHICKEN/PENNSYLVANIA/1370/83) PHEMA_IACKV HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 119-146 384-443 A/CHICKEN/VICTORIA/1/85) PHEMA_IADA1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/DUCK/ALBERTA/28/76) PHEMA_IADA2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 423-453 499-543 A/DUCK/ALBERTA/60/76) PHEMA_IADA3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/DUCK/ALBERTA/78/76) PHEMA_IADA4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 418-478 A/DUCK/ALBERTA/35/76) PHEMA_IADCZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/DUCK/CZECHOSLOVAKIA/56) PHEMA_IADE1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-55 402-453 506-533 A/DUCK/ENGLAND/1/56) PHEMA_IADH1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/5/77) PHEMA_IADH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/8/80) PHEMA_IADH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/33/80) PHEMA_IADH4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/7/82) PHEMA_IADH5 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/21/82) PHEMA_IADH6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/9/85) PHEMA_IADH7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/10/85) PHEMA_IADIR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 415-445 A/DUCK/IRELAND/113/83) PHEMA_IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-56 A/DUCK/MEMPHIS/546/76) PHEMA_IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/DUCK/MEMPHIS/928/74) PHEMA_IADMA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 31-58 A/DUCK/MANITOBA/1/53) PHEMA_IADNY HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-55 A/DUCK/NEW YORK/12/78) PHEMA_IADNZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/DUCK/NEW ZEALAND/31/76) PHEMA_IADU1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-55 A/DUCK/UKRAINE/1/60) PHEMA_IADU3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/DUCK/UKRAINE/1/63) PHEMA_IAEN6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 24-51 A/ENGLAND/878/69) PHEMA_IAEN7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453 A/ENGLAND/321/77) PHEMA_IAFPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 177-221 384-442 A/FOWL PLAGUE VIRUS/ROSTOCK/34) PHEMA_IAGRE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/GREY TEAL/AUSTRALIA/2/79) PHEMA_IAGU2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 505-532 A/GULL/MARYLAND/704/77) PHEMA_IAGUA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 504-531 A/GULL/ASTRAKHAN/227/84) PHEMA_IAHAL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/ALGIERS/72) PHEMA_IAHAR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/HARBIN/1/88) 29-56 PHEMA_IAHC6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/CAMBRIDGE/1/63) PHEMA_IAHC7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/CAMBRIDGE/1/73) PHEMA_IAHCD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/C.DETROIT/1/64) PHEMA_IAHDE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/DETROIT/1/64) PHEMA_IAHFO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/FONTAINEBLEAU/76) PHEMA_IAHK6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/KENTUCKY/2/86) PHEMA_IAHK7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/KENTUCKY/1/87) PHEMA_IAHLE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/LEXINGTON/1/66) PHEMA_IAHLO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/LONDON/1416/73) PHEMA_IAHMI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/MIAMI/1/63) PHEMA_IAHNM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/NEW MARKET/76) PHEMA_IAHNN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/NEW MARKET/1/77) PHEMA_IAHPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/PRAGUE/1/56) PHEMA_IAHRO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/ROMANIA/80) PHEMA_IAHSA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/SANTIAGO/1/85) PHEMA_IAHSP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/SAO PAULO/1/76) PHEMA_IAHSW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN) 29-56 194-221 388-457 A/EQUINE/SWITZERLAND/137/72 PHEMA_IAHTE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/TENNESSEE/5/86) PHEMA_IAHTO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-455 A/EQUINE/TOKYO/71) PHEMA_IAHUR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/URUGUAY/1/63) PHEMA_IAJAP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 196-223 A/JAPAN/305/57) PHEMA_IAKIE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 425-478 A/KIEV/59/79) PHEMA_IALEN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 425-478 A/LENINGRAD/54/1) PHEMA_IAMAA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 380-450 A/MALLARD/ASTRAKHAN/244/82) PHEMA_IAMAB HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 385-455 A/MALLARD/ASTRAKHAN/263/82) PHEMA_IAMAO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/MALLARD/NEW YORK/6874/78) PHEMA_IAME1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453 A/MEMPHIS/1/71) PHEMA_IAME2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453 A/MEMPHIS/102/72) PHEMA_IAME6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 24-51 371-437 A/MEMPHIS/6/86) PHEMA_IAMIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 31-58 382-441 A/MINK/SWEDEN/84) PHEMA_IANT6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/NT/60/68) PHEMA_IAP1L HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 505-534 A/PILOT WHALE/MAINE/328/84) PHEMA_IAPUE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 425-478 A/PUERTO RICO/8/34) PHEMA_IAQU7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 24-51 A/QU/7/70) PHEMA_IARUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/RUDDY TURNSTONE/NEW JERSEY/47/85) PHEMA_IASE2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/SEAL/MASSACHUSETTS/133/82) PHEMA_IASH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 28-56 160-187 506-547 A/SHEARWATER/AUSTRALIA/72) PHEMA_IASTA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 119-146 384-443 A/STARLING/VICTORIA/5156/85) PHEMA_IATA1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 A/TAIWAN/1/86) PHEMA_IATK1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 415-445 A/TURKEY/IRELAND/1378/83) PHEMA_IATKM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/TURKEY/MINNESOTA/833/80) PHEMA_IATKO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 507-534 A/TURKEY/ONTARIO/7732/66) PHEMA_IATKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 424-454 493-539 A/TURKEY/ONTARIO/6118/68) PHEMA_IATKR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 32-62 194-221 381-422 A/TURKEY/OREGON/71) PHEMA_IATKW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 419-449 500-536 A/TURKEY/WISCONSIN/1/66) PHEMA_IATRA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-55 A/TERN/AUSTRALIA/G70C/75) PHEMA_IAUDO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453 A/UDORN/307/72) PHEMA_IAUSS HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/USSR/90/77) 29-56 425-478 PHEMA_IAVI7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 41-68 388-454 A/VICTORIA/3/75) PHEMA_IAWIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 424-477 A/WILSON-SMITH/33) PHEMA_IAXIA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 A/XIANFENG/3/89) PHEMA_IAZCO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453 A/SWINE/COLORADO/1/77) PHEMA_IAZH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/SWINE/HONG KONG/81/78) PHEMA_IAZH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/SWINE/HONG KONG/126/82) PHEMA_IAZIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 418-478 506-547 A/SWINE/INDIANA/1726/88) PHEMA_IAZNJ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 418-478 506-547 A/SWINE/NEW JERSEY/11/76) PHEMA_IAZUK HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/SWINE/UKKEL/1/84) PHEMA_INBBE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/BEIJING/1/87) 400-431 439-483 PHEMA_INBBO HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/BONN/43) 390-421 429-473 PHEMA_INBEN HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 398-429 437-481 B/ENGLAND/222/82) PHEMA_INBHK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 391-418 429-473 B/HONG KONG/8/73) PHEMA_INBLE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/LEE/40) 399-430 438-482 PHEMA_INBMD HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 389-420 428-472 B/MARYLAND/59) PHEMA_INBME HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 393-424 432-476 B/MEMPHIS/6/86) PHEMA_INBOR HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 398-429 437-481 B/OREGON/5/80) PHEMA_INBS1 HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 398-429 437-481 B/SINGAPORE/222/79) PHEMA_INBUS HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 391-422 430-474 B/USSR/100/83) PHEMA_INBVI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 393-424 432-476 B/VICTORIA/3/85) PHEMA_INBVK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 400-431 439-483 B/VICTORIA/2/87) PHEMA_INCCA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 495-571 C/CALIFORNIA/78) PHEMA_INCEN HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 483-559 C/ENGLAND/892/83) PHEMA_INCGL HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 483-559 C/GREAT LAKES/1167/54) PHEMA_INCHY HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 482-558 C/HYOGO/1/83) PHEMA_INCJH HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 496-572 C/JOHANNESBURG/1/66) PHEMA_INCKY HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 482-558 (STRAIN C/KYOTO/41/82) PHEMA_INCMI HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 482-558 (STRAIN C/MISSISSIPPI/80) PHEMA_INCNA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 482-558 (STRAIN C/NARA/82) PHEMA_INCP1 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/PIG/BEIJING/10/81) PHEMA_INCP2 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/PIG/BEIJING/115/81) PHEMA_INCP3 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/PIG/BEIJING/439/82) PHEMA_INCTA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/TAYLOR/1233/47) PHEMA_INCYA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/YAMAGATA/10/81) PHEMA_NDVA HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN AUSTRALIA-VICTORIA/32) PHEMA_NDVB HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN BEAUDETTE C/45) PHEMA_NDVD HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN D26/76) PHEMA_NDVH HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN B1-HITCHNER/47) PHEMA_NDVI HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN ITALIEN/45) PHEMA_NDVM HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN MIYADERA/51) PHEMA_NDVQ HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN QUEENSLAND/66) PHEMA_NDVTG HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN TEXAS G.B./48) PHEMA_NDVU HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN ULSTER/67) PHEMA_PHODV HEMAGGLUTININ- PHOCINE DISTEMPER VIRUS 39-66 46-73 NEURAMINIDASE PHEMA_PI1HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 1 VIRUS 79-110 366-393 NEURAMINIDASE (STRAIN WASHINGTON/1957) PHEMA_PI3B HEMAGGLUTININ- BOVINE PARAINFLUENZA 3 VIRUS 66-93 NEURAMINIDASE PHEMA_PI3H4 HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN NIH 47885) PHEMA_PI3HA HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN AUS/124854/74) PHEMA_PI3HT HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-76 NEURAMINIDASE (STRAIN TEX/545/80) PHEMA_PI3HU HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 23-70 NEURAMINIDASE (STRAIN TEX/9305/82) PHEMA_PI3HV HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN TEX/12677/83) PHEMA_PI3HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN WASH/641/79) PHEMA_PI3HX HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN WASH/1511/73) PHEMA_RACVI HEMAGGLUTININ PRECURSOR RACCOON POXVIRUS 166-214 256-283 PHEMA_SEND5 HEMAGGLUTININ- SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 79-106 NEURAMINIDASE PHEMA_SENDF HEMAGGLUTININ- SENDAI VIRUS (STRAIN FUSHIMI) 79-106 NEURAMINIDASE PHEMA_SENDH HEMAGGLUTININ- SENDAI VIRUS (STRAIN HARRIS) 79-106 NEURAMINIDASE PHEMA_SENDJ HEMAGGLUTININ- SENDAI VIRUS (STRAIN HVJ) 79-106 NEURAMINIDASE PHEMA_SENDZ HEMAGGLUTININ- SENDAI VIRUS (STRAIN Z) 79-106 NEURAMINIDASE PHEMA_SV41 HEMAGGLUTININ- SIMIAN VIRUS 41 22-52 394-421 NEURAMINIDASE PHEMA_VACCC HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 119-146 175-202 216-243 PHEMA_VACCI HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN IHD-J) 109-146 175-202 216-243 PHEMA_VACCT HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN TIAN TAN) 119-146 175-202 216-243 PHEMA_VACCV HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN WR) 109-146 175-202 215-242 PHEMA_VARV HEMAGGLUTININ PRECURSOR VARIOLA VIRUS 111-148 177-211 214-244 PHEX9_ADE02 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 2 100-134 PHEX9_ADE05 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 5 100-134 PHEX9_ADE07 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPES 3 and 7 97-127 PHEX_ADE02 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 2 146-173 359-386 433-460 PHEX_ADE05 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 5 348-375 PHEX_ADE40 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 40 396-423 PHEX_ADEB3 HEXON PROTEIN BOVINE ADENOVIRUS TYPE 3 305-338 PHI38_COWPX HEMORRHAGE-INDUCING COWPOX VIRUS 28-55 38 KD PROTEIN PHRG_COWPX HOST RANGE PROTEIN COWPOX VIRUS 462-489 PI196_ASFB7 LATE PROTEIN I196L AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 12-43 PI226_ASFB7 LATE PROTEIN I226R AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 113-147 PIBMP_CAMV4 INCLUSION BODY MATRIX CAULIFLOWER MOSAIC VIRUS (STRAIN D4) 17-44 PROTEIN PIBMP_CAMVD INCLUSION BODY MATRIX CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 17-44 PROTEIN PIBMP_CAMVP INCLUSION BODY MATRIX CAULIFLOWER MOSAIC VIRUS (STRAIN PV147) 383-410 PROTEIN PIBMP_CERV INCLUSION BODY MATRIX CARNATION ETCHED RING VIRUS 6-33 PROTEIN PIBMP_FMVD INCLUSION BODY MATRIX FIGWORT MOSAIC VIRUS (STRAIN DXS) 372-407 PROTEIN PIBMP_SOCMV INCLUSION BODY MATRIX SOYBEAN CHLOROTIC MOTTLE VIRUS 3-48 331-358 PROTEIN PIC18_HCMVA PROB PROC & TRANSPORT HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 294-324 PRO UL56 PIC18_HSVSA PROBABLE PROC & TRANSPORT HERPESVIRUS SAIMIRI (STRAIN 11) 58-85 482-522 PRO PIC18_MCMVS PROB PROC & TRANSPORT MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 661-691 PRO PIE63_HSV11 TRANSCRIPTIONAL REGULATOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 248-275 IE63 PIE68_HSV11 IMMEDIATE-EARLY PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 40-67 IE68 PIE68_HSVSA IMMEDIATE-EARLY PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 48-78 PIR05_HCMVA HYPOTHETICAL PROTEIN IRL5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 22-49 PIR12_HCMVA HYPOTHETICAL PROTEIN IRL12 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 74-162 PIR13_HCMVA HYPOTHETICAL PROTEIN IRL13 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 31-62 PKFES_FSVGA TYROSINE KINASE TRANSF FELINE SARCOMA VIRUS (STRAIN 106-150 PROTEIN FES GARDNER-ARNSTEIN) PKFGR_FSVGR TYROSINE KINASE TRANSF FELINE SARCOMA VIRUS (STRAIN 218-252 PROTEIN FGR GARDNER-RASHEED) PKFMS_FSVMD FMS TYROSINE KINASE TRANSF FELINE SARCOMA VIRUS (STRAIN 327-362 PROTEIN MCDONOUGH) PKFPS_FUJSV TYROSINE KINASE TRANSF FUJINAMI SARCOMA VIRUS 155-243 349-397 PROTEIN FPS PKITH_AMEPV THYMIDINE KINASE AMSACTA MOOREI ENTOMOPOXVIRUS 47-84 PKITH_CAPVK THYMIDINE KINASE CAPRIPOXVIRUS (STRAIN KS-1) 41-68 PKITH_HSVSA THYMIDINE KINASE HERPESVIRUS SAIMIRI (STRAIN 11) 340-386 PKITH_ILTVT THYMIDINE KINASE INFECTIOUS LARYNGOTRACHEITIS VIRUS 334-361 (STRAIN THORNE V882) PKR74_HSVI1 GENE 74 PROTEIN KINASE ICTALURID HERPESVIRUS 1 491-518 PKRB1_VACCC 30 KD PROTEIN KINASE VACCINIA VIRUS (STRAIN COPENHAGEN) 141-168 HOMOLOG PKRB1_VACCV 30 KD PROTEIN KINASE VACCINIA VIRUS (STRAIN WR) 141-168 HOMOLOG PKRB2_VACCC POSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STRAIN COPENHAGEN) 147-174 PKRB2_VACCV POSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STRAIN WR) 147-174 PKRF1_VACCC POSSIBLE PROTEIN KINASE F10 VACCINIA VIRUS (STRAIN COPENHAGEN) 47-74 PKRF1_VARV POSSIBLE PROTEIN KINASE F10 VARIOLA VIRUS 47-74 PKROS_AVISU ROS TYROSINE KINASE AVIAN SARCOMA VIRUS (STRAIN UR2) 111-138 TRANSF PROTEIN PKRYK_AVIR3 TYROSINE KINASE TRANSF AVIAN RETROVIRUS RPL30 22-49 PROTEIN RYK PKYES_AVISY TYROSINE KINASE TRANSF AVIAN SARCOMA VIRUS (STRAIN Y73) 199-233 PROTEIN YES PL100_ADE02 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 386-413 PL100_ADE05 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 386-413 PL100_ADE40 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 40 191-231 PL100_ADE41 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 41 206-233 PLMP1_EBV LATENT MEMBRANE PROTEIN 1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 148-175 PLMP1_EBVC LATENT MEMBRANE PROTEIN 1 EPSTEIN-BARR VIRUS (STRAIN CAO) 148-175 PLMP1_EBVR LATENT MEMBRANE PROTEIN 1 EPSTEIN-BARR VIRUS (STRAIN RAJI) 148-175 PLMP2_EBV GENE TERMINAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 294-321 PMCEL_SFVKA MRNA CAPPING ENZYME, SHOPE FIBROMA VIRUS (STRAIN KASZA) 54-156 289-316 497-524 622-656 LARGE SUBUNI PMCEL_VACCC MRNA CAPPING ENZYME, VACCINIA VIRUS (STRAIN COPENHAGEN) 85-112 291-318 630-657 LARGE SUBUNI PMCEL_VACCV MRNA CAPPING ENZYME, VACCINIA VIRUS (STRAIN WR) 85-112 291-318 630-657 LARGE SUBUNI PMCEL_VARV MRNA CAPPING ENZYME, VARIOLA VIRUS 85-112 291-318 630-657 LARGE SUBUNI PMCE_ASFB7 MRNA CAPPING ENZYME AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 279-313 PMOVP_CGMVS MOVEMENT PROTEIN CUCUMBER GREEN MOTTLE MOSAIC VIRUS 170-197 (WATERMELON STRAIN W) PMOVP_CGMVW MOVEMENT PROTEIN CUCUMBER GREEN MOTTLE MOSAIC VIRUS 170-197 (WATERMELON STRAIN SH) PMOVP_ORSV MOVEMENT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS 53-90 PMOVP_TOMVA MOVEMENT PROTEIN TOMATO MOSAIC VIRUS (STRAIN LIIA) 46-80 PMOVP_TOMVL MOVEMENT PROTEIN TOMATO MOSAIC VIRUS (STRAIN LII) 46-80 PMTC1_CHVN1 MODIFICATION METHYLASE CHLORELLA VIRUS NC-1A 143-170 229-256 CVIBI PMTC2_CHVP1 MODIFICATION METHYLASE PARAMECIUM BURSARIA CHLORELLA VIRUS 1 4-31 130-172 CVIAII PMYC_AVIM2 MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS CMII 232-266 375-402 PMYC_AVIMC MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS MC29 233-267 376-403 PMYC_AVIMD MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS HBI 233-267 376-403 PMYC_AVIME MYC TRANSFORMING PROTEIN AVIAN RETROVIRUS MH2E21 239-268 377-404 PMYC_AVIOK MYC TRANSFORMING PROTEIN AVIAN RETROVIRUS OK10 227-261 370-397 PMYC_FLV MYC TRANSFORMING PROTEIN FELINE LEUKEMIA VIRUS 393-420 PMYC_FLVTT MYC TRANSFORMING PROTEIN FELINE LEUKEMIA PROVIRUS FTT 393-420 PNCAP_BEV NUCLEOCAPSID PROTEIN BERNE VIRUS 49-76 129-156 PNCAP_BUNLC NUCLEOCAPSID PROTEIN BUNYAVIRUS LA CROSSE 85-112 PNCAP_BUNSH NUCLEOCAPSID PROTEIN BUNYAVIRUS SNOWSHOE HARE 96-123 PNCAP_BUNYW NUCLEOCAPSID PROTEIN BUNYAMWERA VIRUS 48-75 189-220 PNCAP_CCHFV NUCLEOCAPSID PROTEIN CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS 223-271 (ISOLATE C68031) PNCAP_CDVO NUCLEOCAPSID PROTEIN CANINE DISTEMPER VIRUS (STRAIN 140-174 ONDERSTEPOORT) PNCAP_CHAV NUCLEOCAPSID PROTEIN CHANDIPURA VIRUS (STRAIN 1653514) 40-74 PNCAP_CVCAE NUCLEOCAPSID PROTEIN CANINE ENTERIC CORONAVIRUS (STRAIN K378) 191-227 PNCAP_CVPPU NUCLEOCAPSID PROTEIN PORCINE TRANSMISSIBLE GASTROENTERITIS 191-227 CORONAVIRUS (STRAIN PURD PNCAP_CVPR8 NUCLEOCAPSID PROTEIN PORCINE RESPIRATORY CORONAVIRUS 191-227 (STRAIN 86/137004/BRITISH ISOLAT PNCAP_CVPRM NUCLEOCAPSID PROTEIN PORCINE RESPIRATORY CORONAVIRUS 191-227 (STRAIN RM4) PNCAP_DUGBV NUCLEOCAPSID PROTEIN DUGBE VIRUS 238-265 PNCAP_FIPV NUCLEOCAPSID PROTEIN FELINE INFECTIOUS PERITONITIS VIRUS 182-209 (STRAIN 79-1146) PNCAP_HAZVJ NUCLEOCAPSID PROTEIN HAZARA VIRUS (ISOLATE JC280) 6-33 256-283 PNCAP_HRSV1 NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 4-31 74-108 112-141 (SUBGROUP B/STRAIN 18537) PNCAP_HRSVA NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 4-31 (STRAIN A2) PNCAP_LASSG NUCLEOCAPSID PROTEIN LASSA VIRUS (STRAIN GA391) 64-99 147-174 PNCAP_LASSJ NUCLEOCAPSID PROTEIN LASSA VIRUS (STRAIN JOSIAH) 64-99 467-504 PNCAP_LYCVA NUCLEOCAPSID PROTEIN LYMPHOCYTIC CHORIOMENINGITIS VIRUS 64-97 (STRAIN ARMSTRONG) PNCAP_MAGV NUCLEOCAPSID PROTEIN MAGUARI VIRUS 41-68 192-219 PNCAP_MOPEI NUCLEOCAPSID PROTEIN MOPEIA VIRUS 64-99 PNCAP_PI1HC NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 377-404 455-482 PNCAP_PI1HW NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 377-404 444-488 (STRAIN WASHINGTON/1957) PNCAP_PI3H4 NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 3 VIRUS 376-403 (STRAIN N1H) 47885 PNCAP_PTPV NUCLEOCAPSID PROTEIN PUNTA TORO PHLEBOVIRUS 3-30 PNCAP_PUUMH NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN HALLNAS B1) 2-29 PNCAP_PUUMS NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN SOTKAMO) 2-29 PNCAP_PVM NUCLEOCAPSID PROTEIN PNEUMONIA VIRUS OF MICE 93-120 PNCAP_RABVA NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN AVO1) 133-167 PNCAP_RABVP NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN PV) 133-167 PNCAP_RABVS NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN SAD B19) 133-167 PNCAP_SEND5 NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 363-404 PNCAP_SENDE NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN ENDERS) 363-404 PNCAP_SENDZ NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z) 363-404 PNCAP_SFSV NUCLEOCAPSID PROTEIN SANDFLY FEVER SICILIAN VIRUS 4-31 PNCAP_SV41 NUCLEOCAPSID PROTEIN SIMIAN VIRUS 41 507-534 PNCAP_TACV NUCLEOCAPSID PROTEIN TACARIBE VIRUS 50-77 PNCAP_TOSV NUCLEOCAPSID PROTEIN TOSCANA VIRUS 6-33 PNCAP_UUK NUCLEOCAPSID PROTEIN UUKUNIEMI VIRUS 68-102 PNCAP_VHSV0 NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIA VIRUS 284-314 (STRAIN 07-71) PNCAP_VHSVM NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIA VIRUS 149-176 284-314 (STRAIN MAKAH) PNCAP_VSVIG NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS (SEROTYPE) 56-83 INDIANA/STRAIN GLASGOW PNCAP_VSVJO NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS (SEROTYPE 67-94 338-365 NEW) JERSEY/STRAIN OGDEN PNCAP_VSVSJ NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS 56-83 (STRAIN SAN JUAN) PNEF_HV1EL NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 81-119 (ELI ISOLATE) PNEF_HV1ND NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 81-119 (NDK ISOLATE) PNEF_HV1Z6 NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 86-124 (ZAIRE 6 ISOLATE) PNEF_SIVAI NEGATIVE FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 96-137 (ISOLATE AGM/CLONE GRI-1) PNRAM_IABDA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 47-81 A/BLACK DUCK/AUSTRALIA/702/78) PNRAM_IACAO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 33-64 A/CAMEL/MONGOLIA/82 PNRAM_IACHI NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/CHILE/1/83) 16-43 50-91 PNRAM_IADA1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 51-81 A/DUCK/ALBERTA/28/76) PNRAM_IADGE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 21-48 A/DUCK/GERMANY/49) PNRAM_IAFPW NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 10-48 52-80 197-224 A/FOWL PLAGUE VIRUS/WEYBRIDGE) PNRAM_IAHCO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 197-224 386-413 A/EQUINE/COR/16/74) PNRAM_IAHK1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 5-44 46-76 364-400 A/EQUINE/KENTUCKY/1/81) PNRAM_IAKIE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/KIEV/59/79) 50-81 PNRAM_IALEN NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 50-81 A/LENINGRAD/54/1) PNRAM_IAME1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 16-43 50-81 A/MEMPHIS/1/71H-A/BELLAMY/42N) PNRAM_IAPAR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 16-43 50-81 A/PARROT/ULSTER/73) PNRAM_IAPUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 16-43 A/PUERTO RICO/8/34) PNRAM_IARUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49-88 A/RUDDY TURNSTONE/NEW JERSEY/60/85) PNRAM_IATRA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49-82 A/TERN/AUSTRALIA/G70C/75) PNRAM_IAUSS NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/USSR/90/77) 50-81 PNRAM_IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49-88 A/WHALE/MAINE/1/84) PNRAM_IAWIL NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 16-43 A/WILSON-SMITH/33) PNRAM_INBLE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/LEE/40) 4-35 PNS1_SIDEV PROB NONSTRUC PRO BOMBYX DENSONUCLEOSIS VIRUS 283-310 PRECURSOR PNS2_SIDEV PROB NONSTRUC PRO BOMBYX DENSONUCLEOSIS VIRUS 42-69 PRECURSOR PNSS_INSVN NON-STRUCTURAL PROTEIN IMPATIENS NECROTIC SPOT VIRUS 95-122 (STRAIN NL-07) PNSS_TSWVB NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS 5-32 432-462 (BRAZILIAN ISOLATE CPNH1/BR-01) PNSS_TSWVL NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS (STRAIN L3) 5-32 PNTP1_AMEPV NUCLEOSIDE TRIPHOS- AMSACTA MOOREI ENTOMOPOXVIRUS 28-69 PHATASE I PNTP1_CBEPV NUCLEOSIDE TRIPHOS- CHORISTONEURA BIENNIS ENTOMOPOXVIRUS 122-166 347-374 524-551 PHATASE I PNTP1_VACCC NUCLEOSIDE TRIPHOS- VACCINIA VIRUS (STRAIN COPENHAGEN) 65-92 394-421 514-587 PHATASE I PNTP1_VACCV NUCLEOSIDE TRIPHOS- VACCINIA VIRUS (STRAIN WR) 65-92 394-421 514-587 PHATASE I PNTP1_VARV NUCLEOSIDE TRIPHOS- VARIOLA VIRUS 300-327 420-447 455-493 PHATASE I PP100_HSV6U MAJOR ANTIGENIC STRUCTL HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 81-108 189-216 688-715 785-812 PROTEIN UGANDA-1102) PPAP1_VACCC POLY(A) POL CATALYTIC VACCINIA VIRUS (STRAIN COPENHAGEN) 88-115 SUBUNIT PPAP1_VACCV POLY(A) POL CATALYTIC VACCINIA VIRUS (STRAIN WR) 88-115 SUBUNIT PPAP1_VARV POLY(A) POL CATALYTIC VARIOLA VIRUS 88-115 SUBUNIT PPAP2_CAPVK POLY(A) POL REG SUBUNIT CAPRIPOXVIRUS (STRAIN KS-1) 118-145 PPAP2_FOWPV POLY(A) POL REG SUBUNIT FOWLPOX VIRUS 27-54 PPE12_NPVAC 12.1 KD PROTEIN IN PE AUTOGRAPHA CALIFORNICA NUCLEAR 61-105 5′REGION POLYHEDROSIS VIRUS PPE12_NPVOP 11.5 KD PROTEIN IN P26 ORGYIA PSEUDOTSUGATA MULTICAPSID 61-95 5′REGION POLYHEDROSIS VIRUS PPE38_NPVAC MAJOR IMMEDIATE EARLY AUTOGRAPHA CALIFORNICA NUCLEAR 204-248 PROTEIN POLYHEDROSIS VIRUS PPE48_NPVAC 48.3 KD IN PE-P26 AUTOGRAPHA CALIFORNICA NUCLEAR 4-38 51-78 INTERGENIC REGION POLYHEDROSIS VIRUS PPEN3_ADEGX PENTON PROTEIN AVIAN ADENOVIRUS GAL10 (STRAIN SA2) 96-123 PPOL1_BAYMG GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 1272- 1775- 2236- (GERMAN ISOLATE) 1299 1802 2263 PPOL1_BAYMJ GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 1774- 2234- (JAPANESE STRAIN II-1) 1801 2261 PPOL1_GCMV RNA1 POLYPROTEIN HUNGARIAN GRAPEVINE CHROME 481-508 1909- MOSAIC VIRUS 1941 PPOL1_GFLV RNA1 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 170-197 636-677 958-985 1161- 1195 PPOL1_TBRVS RNA1 POLYPROTEIN TOMATO BLACK RING VIRUS (STRAIN S) 1096- 1123 PPOL2_BAYMG GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 240-281 801-828 (GERMAN ISOLATE) PPOL2_BAYMJ GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 240-267 801-828 (JAPANESE STRAIN II-1) PPOL2_GCMV RNA2 POLYPROTEIN HUNGARIAN GRAPEVINE CHROME MOSAIC VIRUS 11-38 PPOL2_GFLV RNA2 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 549-576 PPOL2_TRSVR RNA2 POLYPROTEIN TOMATO RINGSPOT VIRUS 982- (ISOLATE RASPBERRY) 1009 PPOLG_BOVEV GENOME POLYPROTEIN BOVINE ENTEROVIRUS (STRAIN VG-5-27) 17-44 1030- 1145- 1057 1172 PPOLG_BVDVN GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS (ISOLATE NADL) 629-660 1082- 1303- 2233- 2476- 2609- 3613- 1112 1330 2261 2503 2636 3642 PPOLG_BVDVS GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS (STRAIN SD-1) 1303- 2143- 2519- 2802- 3523- 1333 2171 2546 2829 3550 PPOLG_BYMV GENOME POLYPROTEIN BEAN YELLOW MOSAIC VIRUS 96-123 PPOLG_COXA2 GENOME POLYPROTEIN COXSACKIEVIRUS A21 (STRAIN COE) 7-43 664-694 1062- 1900- 1099 1930 PPOLG_COXA9 GENOME POLYPROTEIN COXSACKIEVIRUS A9 (STRAIN GRIGGS) 1040- 1076 PPOLG_COXB1 GENOME POLYPROTEIN COXSACKIEVIRUS B1 645-672 841-868 1021- 1057 PPOLG_COXB3 GENOME POLYPROTEIN COXSACKIEVIRUS B3 1024- 1881- 1060 1908 PPOLG_COXB4 GENOME POLYPROTEIN COXSACKIEVIRUS B4 644-673 1022- 1058 PPOLG_COXB5 GENOME POLYPROTEIN COXSACKIEVIRUS B5 1024- 1060 PPOLG_CYVV GENOME POLYPROTEIN CLOVER YELLOW VEIN VIRUS 120-154 PPOLG_DEN1S GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN SINGAPORE 1858- 2890- 2989- S275/90) 1885 2935 3016 PPOLG_DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681) 1544- 1858- 2908- 2982- 3117- 1571 1885 2935 3016 3147 PPOLG_DEN27 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681-PDK53) 1544- 1858- 2485- 2908- 2982- 3117- 1571 1885 2519 2935 3016 3147 PPOLG_DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN JAMAICA) 1544- 1858- 2908- 3117- 3346- 1571 1885 2935 3147 3373 PPOLG_DEN2P GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN PR159/S1) 1544- 1858- 2905- 2979- 3114-3343- 1571 1885 2932 3013 3144 3370 PPOLG_DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TONGA 1974) 1134- 1448- 1161 1475 PPOLG_DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 837-864 1542- 1857- 2494- 2980- 3345- 1569 1884 2521 3014 3372 PPOLG_DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4 2885- 2977- 3342- 2930 3011 3369 PPOLG_EC11G GENOME POLYPROTEIN ECHOVIRUS 11 (STRAIN GREGORY) 213-249 PPOLG_EMCV GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 70-108 1484- 1522- 1518 1563 PPOLG_EMCVB GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 70-97 1486- 1524- (STRAIN EMC-B NONDIABETOGENIC) 1520 1565 PPOLG_EMCVD GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 70-97 1486- 1524- (STRAIN EMC-D DIABETOGENIC) 1520 1565 PPOLG_ENMG3 GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS 70-108 (STRAIN 37A) PPOLG_ENMGO GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS 3-41 PPOLG_FMDV1 GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 302-329 1119- (STRAIN A10-61) 1146 PPOLG_FMDVA GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 301-328 1119- (STRAIN A12) 1146 PPOLG_FMDVO GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 1119- (STRAINS O1K AND O1BFS) 1146 PPOLG_FMDVS GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 101-128 (STRAIN C1-SANTA PAU [C-S8]) PPOLG_HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1) 702-729 PPOLG_HCVA GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN ALFORT) 699-726 1195- 1303- 1434- 3068- 3406- 1232 1333 1461 3095 3440 PPOLG_HCVB GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN BRESCIA) 699-726 1195- 3068- 3406- 3532- 1232 3095 3440 3559 PPOLG_HCVBK GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE BK) 702-729 1045- 1072 PPOLG_HCVH GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE H) 702-729 1045- 1072 PPOLG_HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J6) 374-401 2089- 2116 PPOLG_HCVJ8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J8) 1049- 2089- 1076 2116 PPOLG_HCVJA GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE JAPANESE) 378-405 702-729 1045- 1072 PPOLG_HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-JT) 702-729 1045- 1072 PPOLG_HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE TAIWAN) 702-729 1045- 1072 PPOLG_HPAV2 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 24A) 203-237 1021- 1117- 1454- 1048 1149 1481 PPOLG_HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 43C) 203-237 1021- 1117- 1454- 1048 1149 1481 PPOLG_HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 18F) 203-237 1021- 1117- 1454- 1048 1149 1481 PPOLG_HPAVC GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN CR326) 203-237 PPOLG_HPAVG GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN GA76) 182-216 PPOLG_HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN HM-175) 203-237 1021- 1103- 1048 1149 PPOLG_HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN LA) 203-237 1021- 1103- 1048 1149 PPOLG_HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN MBB) 203-237 1021- 1103- 1048 1149 PPOLG_HPAVS GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS (STRAIN AGM-27) 207-241 1025- 1115- 1052 1192 PPOLG_HPAVT GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS (STRAIN CY-145) 203-237 PPOLG_HRV14 GENOME POLYPROTEIN HUMAN RHINOVIRUS 14 17-44 559-586 652-679 1877- 1904 PPOLG_HRV1B GENOME POLYPROTEIN HUMAN RHINOVIRUS 1B 1132- 1855- 1159 1882 PPOLG_HRV2 GENOME POLYPROTEIN HUMAN RHINOVIRUS 2 1125- 1552- 1152 1593 PPOLG_HRV89 GENOME POLYPROTEIN HUMAN RHINOVIRUS 89 883-910 1141- 1566- 1862- 1168 1607 1889 PPOLG_HUEV7 GENOME POLYPROTEIN HUMAN ENTEROVIRUS 70 (STRAIN J670/71) 876-910 PPOLG_IBDVO STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-277 (STRAIN OH) PPOLG_JAEV1 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS (STRAIN SA-14) 214-248 983- 2796- 1010 2823 PPOLG_JAEV5 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS (STRAIN SA(V)) 214-248 983- 2796- 1010 2823 PPOLG_JAEVJ GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS (STRAIN 214-248 983- 2796- JAOARS982) 1010 2823 PPOLG_JAEVN GENOME POLYPROTEIN JAPANESE ENCEPHALAITS VIRUS (STRAIN 141-175 911-938 NAKAYAMA) PPOLG_KUNJM GENOME POLYPROTEIN KUNJIN VIRUS (STRAIN MRM61C) 980-1007 PPOLG_LANVT GENOME POLYPROTEIN LANGAT VIRUS (STRAIN TP21) 431-465 1634- 1661 PPOLG_LANVY GENOME POLYPROTEIN LANGAT VIRUS (STRAIN YELANTSEV) 431-465 PPOLG_LIV GENOME POLYPROTEIN LOUPING ILL VIRUS 431-465 PPOLG_LIVSB GENOME POLYPROTEIN LOUPING ILL VIRUS (STRAIN SB 526) 151-185 PPOLG_MCFA GENOME POLYPROTEIN MOSQUITO CELL FUSING AGENT 671-698 3056- 3303- 3083 3330 PPOLG_MDMV GENOME POLYPROTEIN MAIZE DWARF MOSAIC VIRUS 10-37 PPOLG_MVEV GENOME POLYPROTEIN MURRAY VALLEY ENCEPHALITIS VIRUS 212-256 PPOLG_OMV GENOME POLYPROTEIN ORNITHOGALUM MOSAIC VIRUS 24-51 946-973 PPOLG_PEMVC GENOME POLYPROTEIN PEPPER MOTTLE VIRUS (CALIFORNIA ISOLATE) 377-404 704-738 831-858 900-927 1167- 1485- 1787- 2433- 1201 1512 1814 2464 PPOLG_POL1M GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY) 1060- 1901- 1100 1931 PPOLG_POL1S GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN SABIN) 670-697 1063- 1903- 1101 1933 PPOLG_POL2L GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN LANSING) 1061- 1901- 1099 1931 PPOLG_POL2W GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN W-2) 1061- 1901- 1099 1931 PPOLG_POL32 GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAIN 23127) 1060- 1900- 1098 1930 PPOLG_POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAINS P3/LEON/37 1060- 1900- AND P3/LEON 12A[1]B) 1098 1930 PPOLG_PPVD GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN D) 921-948 1498- 2771- 948 1525 2798 PPOLG_PPVEA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN EL AMAR) 1146- 1187 PPOLG_PPVNA GENOME POLYPROTEIN PLUM POX POTYVIRUS (ISOLATE NAT) 920-947 1497- 2770- 1524 2800 PPOLG_PPVRA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN RANKOVIC) 920-947 1497- 2770- 1524 2797 PPOLG_PRSVH GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS (STRAIN P/MUTANT HA) 500-527 PPOLG_PRSVP GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS (STRAIN P/MUTANT 391-418 HA 5-1) PPOLG_PRSVW GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS (STRAIN W) 489-516 PPOLG_PSBMV GENOME POLYPROTEIN PEA SEED-BORNE MOSAIC VIRUS (STRAIN DPD1) 271-315 1132- 1510- 1177 1537 PPOLG_PVYC GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN C) (PVY) 433-460 701-735 PPOLG_PVYHU GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN HUNGARIAN) 218-245 433-460 701-735 1486- 1777- 1513 1811 PPOLG_PVYN GENOME POLYPROTEIN POTATA VIRUS Y (STRAIN N) 433-460 701-735 1486- 1777- 1513 1811 PPOLG_PVYO GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN O) 433-460 701-735 PPOLG_PYFV1 GENOME POLYPROTEIN PARSNIP YELLOW FLECK VIRUS (ISOLATE P-121) 1124- 2707- 1151 2734 PPOLG_SUMVS GENOME POLYPROTEIN SUGARCANE MOSAIC VIRUS (STRAIN SC) 10-37 PPOLG_SVDVH GENOME POLYPROTEIN SWINE VESICULAR DISEASE VIRUS 1024- (STRAIN H/3 ′76) 1060 PPOLG_SVDVU GENOME POLYPROTEIN 1024-1060 PPOLG_TBEVS GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 87-121 234-272 1632- 2265- 2909- (STRAIN SOFJIN) 1661 2292 2936 PPOLG_TBEVW GENOME POLYPROTEIN BORNE ENCEPHALATIS VIRUS 1632- (WESTERN SUBTYPE) 1659 PPOLG_TEV GENOME POLYPROTEIN TOBACCO ETCH VIRUS 845-872 1148- 1416- 1773- 1175 1443 1800 PPOLG_TMEVB GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS VIRUS 79-117 200-227 (STRAIN BEAN 8386) PPOLG_TMEVD GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS VIRUS 90-117 200-227 (STRAIN DA) PPOLG_TMEVG GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS VIRUS 90-117 200-227 (STRAIN GDVII) PPOLG_TUMV GENOME POLYPROTEIN TURNIP MOSAIC VIRUS 232-262 773-800 PPOLG_TVMV GENOME POLYPROTEIN TOBACCO VEIN MOTTLING VIRUS 406-433 670-704 2708- 2742 PPOLG_WMV2 GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II 202-229 PPOLG_WNV GENOME POLYPROTEIN WEST NILE VIRUS 210-254 3385- 3412 PPOLG_YEFV1 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN 17D) 436-463 PPOLG_YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN PASTEUR 17D-204) 436-463 PPOLG_ZYMV GENOME POLYPROTEIN ZUCCHINI YELLOW MOSAIC VIRUS 69-96 PPOLH_POL1M GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY) 1063- 1903- 1101 1933 PPOLN_EEVVT NONSTRUCTURAL VENEZUELAN EQUINE ENCEPHALITIS VIRUS 1402- 1894- POLYPROTEIN (STRAIN TRINIDAD DONKEY) 1467 1921 PPOLN_FCVC6 NON-STRUCTURAL FELINE CALICIVIRUS (STRAIN CFI/68 FIV) 445-472 POLYPROTEIN PPOLN_FCVF9 NON-STRUCTURAL FELINE CALICIVIRUS (STRAIN F9) 1034- POLYPROTEIN 1061 PPOLN_HEVBU NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN BURMA) 219-246 349-376 POLYPROTEIN PPOLN_HEVME NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN MEXICO) 219-246 349-376 POLYPROTEIN PPOLN_HEVMY N-STRUCTURAL HEPATITIS E VIRUS (STRAIN MYANMAR) 219-246 349-376 POLYPROTEIN PPOLN_HEVPA NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN PAKISTAN) 218-245 348-375 POLYPROTEIN PPOLN_MIDDV NONSTRUCTURAL MIDDELBURG VIRUS 955-982 POLYPROTEIN PPOLN_ONNVG NONSTRUCTURAL O'NYONG-NYONG VIRUS (STRAIN GULU) 2453- POLYPROTEIN 2480 PPOLN_RHDV NON-STRUCTURAL RABBIT HEMORRHAGIC DISEASE VIRUS 313-347 1657- POLYPROTEIN 1684 PPOLN_RRVN NONSTRUCTURAL ROSS RIVER VIRUS (STRAIN NB5092) 1057- 1477- 2418- POLYPROTEIN 1084 1504 2445 PPOLN_RRVT NONSTRUCTURAL ROSS RIVER VIRUS (STRAIN T48) 146-173 1087- POLYPROTEIN 1114 PPOLN_RUBVT NONSTRUCTURAL RUBELLA VIRUS (STRAIN THERIEN) 2060- POLYPROTEIN 2087 PPOLN_SFV NONSTRUCTURAL SEMLIKI FOREST VIRUS 1154- POLYPROTEIN 1181 PPOLN_SINDO NONSTRUCTURAL SINDBIS VIRUS (SUBTYPE OCKELBO/STRAIN 936-970 POLYPROTEIN EDSBYN 82-5) PPOLN_WEEV NONSTRUCTURAL WESTERN EQUINE ENCEPHALITIS VIRUS 4-31 POLYPROTEIN PPOLS_IBDV5 STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN 52/70) PPOLS_IBDVA STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN AUSTRALIAN 002-73) PPOLS_IBDVC STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN CU-1) PPOLS_IBDVE STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN E) PPOLS_IBDVP STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 212-239 (STRAIN PBG-98) PPOLS_IBDVS STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN STC) PPOLS_ONNVG STRUCTURAL POLYPROTEIN O'NYONG-NYONG VIRUS (STRAIN GULU) 356-383 PPOLS_RRVN STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092) 939-973 PPOLS_RRVT STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48) 939-973 PPOLS_SINDO STRUCTURAL POLYPROTEIN SINDBIS VIRUS (SUBTYPE OCKELBO/STRAIN 1138- EDSBYN 82-5) 1165 PPOLS_SINDV STRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAINS HRSP AND HRLP) 1138- 1165 PPOLS_WEEV STRUCTURAL POLYPROTEIN WESTERN EQUINE ENCEPHALITIS VIRUS 920-947 PPOL_BAEVM POL POLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 675-706 715-742 PPOL_CAEVC POL POLYPROTEIN CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 886-924 (STRAIN CORK) PPOL_COYMV PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE VIRUS 333-360 838-865 1075- 1178- 1313- 1102 1205 1347 PPOL_EIAV9 POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS (CLONE 1369) 472-505 826-853 PPOL_EIAVC POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS (CLONE CL22) 472-505 826-853 PPOL_EIAVY POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 471-504 825-852 (ISOLATE WYOMING) PPOL_FENV1 POL POLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1 532-599 627-654 PPOL_FIVPE POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 442-473 (ISOLATE PETALUMA) PPOL_FMVD ENZYMATIC POLYPROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 403-430 PPOL_GALV POL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 535-562 676-703 PPOL_HTL1A POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 674-712 (STRAIN ATK) PPOL_HTL1C POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 674-712 (CARIBBEAN ISOLATE) PPOL_HV1A2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 218-245 620-661 (ARV2/SF2 ISOLATE) PPOL_HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257 637-673 (BH10 ISOLATE) PPOL_HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257 632-673 (BH5 ISOLATE) PPOL_HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257 632-673 (BRU ISOLATE) PPOL_HV1EL POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 624-660 (ELI ISOLATE) PPOL_HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 218-245 620-661 921-951 (HXB2 ISOLATE) PPOL_HV1JR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 222-249 624-665 (JRCSF ISOLATE) PPOL_HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 476-510 619-660 (MAL ISOLATE) PPOL_HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 221-248 623-664 (MN ISOLATE) PPOL_HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 218-245 625-661 (NEW YORK-5 ISOLATE) PPOL_HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 624-660 (NDK ISOLATE) PPOL_HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 218-245 620-661 (OYI ISOLATE) PPOL_HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257 637-673 (PV22 ISOLATE) PPOL_HV1RH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 619-660 (RF/HAT ISOLATE) PPOL_HV1U4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 613-540 619-660 (STRAIN UGANDAN/IOSLATE U PPOL_HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 619-660 (Z2/CDC-Z34 ISOLATE) PPOL_HV2BE POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 491-582 (ISOLATE BEN) PPOL_HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 471-562 (ISOLATE CAM2) PPOL_HV2D1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 509-600 (ISOLATE D194) PPOL_HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 491-568 (ISOLATE D205,7) PPOL_HV2G1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 471-562 (ISOLATE GHANA-1) PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 471-529 (ISOLATE NIH-Z) PPOL_HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 472-563 (ISOLATE ROD) PPOL_HV2SB POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 473-562 (ISOLATE SBLISY) PPOL_HV2ST POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 491-582 (ISOLATE ST) PPOL_IPHA PUTATIVE POL POLYPROTEIN HAMSTER INTRACISTERNAL A-PARTICLE 200-227 354-381 461-499 PPOL_IPMA PUTATIVE POL POLYPROTEIN MOUSE INTRACISTERNAL A-PARTICLE 211-238 302-329 400-427 PPOL_IPMAI PROBABLE POL POLYPROTEIN MOUSE INTRACISTERNAL A-PARTICLE 130-157 221-248 PPOL_JSRV POL POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 204-231 PPOL_MLVAK POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS 453-480 PPOL_MLVAV POL POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 805-832 PPOL_MLVRD POL POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 716-743 805-832 PPOL_MLVRK POL POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 101-128 190-217 (STRAIN KAPLAN) PPOL_MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 574-612 670-697 PPOL_OMVVS POL POLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV) 67-94 471-505 873-900 PPOL_RSVP POL POLYPROTEIN ROUS SARCOMA VIRUS (STRAIN PRAGUE C) 797-824 PPOL_RTBV POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 7-44 59-93 176-203 202-229 410-437 447-476 1022- 1049 PPOL_RTBVP POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 7-44 59-93 176-203 202-229 410-437 447-476 1022- (ISOLATE PHILIPPINES) 1049 PPOL_SFV1 POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 427-454 PPOL_SIVA1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 431-458 547-574 637-671 (AGM155 ISOLATE) PPOL_SIVA2 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 45-72 (AGM266 ISOLATE) PPOL_SIVA3 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 71-98 (AGM385 ISOLATE) PPOL_SIVAG POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 436-463 482-516 642-669 (AGM3 ISOLATE) PPOL_SIVAI POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 478-515 (ISOLATE AGM/CLONE GR1-1) PPOL_SIVAT POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 657-691 (TYO-1 ISOLATE) PPOL_SIVCZ POL POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 242-269 626-685 (SIV(CPZ)) PPOL_SIVGB POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 227-254 636-670 (ISOLATE GB1) PPOL_SIVM1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 533-560 (MM142-83 ISOLATE) PPOL_SIVMK POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 533-560 (K6W ISOLATE) PPOL_SIVS4 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 496-523 (F236/SMH4 ISOLATE) PPOL_SIVSP POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 499-526 (PBJ/BC13 ISOLATE) PPOL_SMRVH POL POLYPROTEIN SQUIRREL MONKEY RETROVIRUS (SMRV-H) 601-628 PPOL_SOCMV ENZYMATIC POLYPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 268-295 348-419 PPOL_SRV1 POL POLYPROTEIN SIMIAN RETROVIRUS SRV-1 578-612 670-697 PPOL_VILV POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514) 490-524 881-919 PPOL_VILV1 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/CLONE LV1-1KS1) 89-116 490-524 881-919 PPOL_VILV2 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/CLONE LV1-1KS2) 490-524 881-919 PPR73_MMTVB PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 288-315 PPR73_MMTVC PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN C3H) 45-79 PPR73_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 167-201 PPYHD_CPVBM POLYHEDRIN PRECURSOR BOMBYX MORI CYTOPLASMIC POLYHEDROSIS 37-71 VIRUS PPYHD_NPVAC POLYHEDRIN AUTOGRAPHA CALIFORNICA NUCLEAR 13-47 POLYHEDROSIS VIRUS PPYHD_NPVAS POLYHEDRIN AGROTIS SEGETUM NUCLEAR POLYHEDROSIS 14-48 201-228 VIRUS PPYHD_NPVBM POLYHEDRIN BOMBYX MORI NUCLEAR POLYDEDROSIS VIRUS 12-46 PPYHD_NPVBS POLYHEDRIN BUZURA SUPPRESSARIA NUCLEAR POLYHEDROSIS 14-48 VIRUS PPYHD_NPVHC POLYHEDRIN HYPHANTRIA CUNEA NUCLEAR POLYHEDROSIS 13-40 VIRUS PPYHD_NPVLD POLYHEDRIN LYMANTRIA DISPAR MULTICAPSID NUCLEAR 14-48 POLYHEDROSIS VIRUS PPYHD_NPVMB POLYHEDRIN MAMESTRA BRASSICAE NUCLEAR POLYHEDROSIS 14-48 VIRUS PPYHD_NPVOP POLYHEDRIN ORGYIA PSEUDOTSUGATA MULTICAPSID 13-47 POLYHEDROSIS VIRUS PPYHD_NPVOS POLYHEDRIN ORGYIA PSEUDOTSUGATA SINGLE CAPSID 14-48 NUCLEAR POLYHEDROSIS VIRUS PPYHD_NPVPF POLYHEDRIN PANOLIS FLAMMEA MULTIPLE NUCLEOCAPSID 14-48 POLYHEDROSIS VIRUS PPYHD_NPVSE POLYHEDRIN SPODOPTERA EXIGUA NUCLEAR POLYHEDROSIS 14-48 VIRUS (STRAIN US) PPYHD_NPVSF POLYHEDRIN SPODOPTERA FRUGIPERDA NUCLEAR 14-48 POLYHEDROSIS VIRUS PREV_SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 41-68 (TYO-1 ISOLATE) PREV_VILV REV PROTEIN VISNA LENTIVIRUS (STRAIN 1514) 22-62 PRIR1_ASFM2 RIBONUC-DIPHOSPH REDUCT AFRICAN SWINE FEVER VIRUS (ISOLATE MALAWI 7-41 88-119 363-390 LARGE CHA LIL 20/1) PRIR1_HCMVA RIBONUC-DIPHOSPH REDUCT HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 622-649 LARGE CHA PRIR1_HSVEB RIBONUC-DIPHOSPH REDUCT EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 75-102 LARGE CHA PRIR1_HSVSA RIBONUC-DIPHOSPH REDUCT HERPESVIRUS SAIMIRI (STRAIN 11) 324-351 LARGE CHA PRIR1_VACCC RIBONUC-DIPHOSPH REDUCT VACCINIA VIRUS (STRAIN COPENHAGEN) 367-401 LARGE CHA PRIR1_VACCV RIBONUC-DIPHOSPH REDUCT VACCINIA VIRUS (STRAIN WR) 367-401 LARGE CHA PRIR1_VARV RIBONUC-DIPHOSPH REDUCT VARIOLA VIRUS 367-401 LARGE CHA PRIR1_VZVD RIBONUC-DIPHOSPH REDUCT VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 119-146 LARGE CHA PRIR2_HSVB3 RIBONUC-DIPHOSPH REDUCT BOVINE HERPESVIRUS TYPE 1 (STRAIN 34) 90-117 SMALL CHA PRP94_VACCV RNA-POL-ASSOC TRANS SPEC VACCINIA VIRUS (STRAIN WR) 41-68 513-540 FACTOR PRP94_VARV RNA-POL-ASSOC TRANS SPEC VARIOLA VIRUS 41-75 77-104 513-540 FACTOR PRPO1_VACCC DNA-DIRECTED RNA POL VACCINIA VIRUS (STRAIN COPENHAGEN) 237-264 587-616 810-837 961-992 147 KD PRPO1_VACCV DNA-DIRECTED RNA POL VACCINIA VIRUS (STRAIN WR) 237-264 587-616 810-837 961-992 1011- 147 KD 1038 PRPO1_VARV DNA-DIRECTED RNA POL VARIOLA VIRUS 237-264 587-616 810-837 961-992 147 KD PRPO2_CAPVK DNA-DIRECTED RNA POL CAPRIPOXVIRUS (STRAIN KS-1) 19-65 114-155 132 KD PRPO2_COWPX DNA-DIRECTED RNA POL COWPOX VIRUS 211-241 481-509 132 KD PRPO2_VACCV DNA-DIRECTED RNA POL VACCINIA VIRUS (STRAIN WR) 211-241 481-509 132 KD PRPO2_VARV DNA-DIRECTED RNA POL VARIOLA VIRUS 211-241 481-509 132 KD PRPO4_CAPVK DNA-DIRECTED RNA POL 35 KD CAPRIPOXVIRUS (STRAIN KS-1) 36-63 PRPO7_VACCV DNA-DIRECTED RNA POL 19 KD VACCINIA VIRUS (STRAIN WR) 8-35 43-70 PRPO7_VARV DNA-DIRECTED RNA POL 19 KD VARIOLA VIRUS 43-70 PRPOA_LELV RNA-DIRECTED RNA LELYSTAD VIRUS 1533- POLYMERASE 1560 PRPOL_EAV RNA-DIRECTED RNA EQUINE ARTERITIS VIRUS 888-915 1639- POLYMERASE 1673 PRRP1_IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN A/KOREA/426/68) 575-602 POL SUB P1 PRRP2_IAANN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN A/ANN ARBOR/6/60) 119-146 POL SUB P2 PRRP2_IADH2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 119-146 POL SUB P2 A/DUCK/HOKKAIDO/8/80) PRRP2_IAFPR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN A/FOWL 119-146 POL SUB P2 PLAGUE VIRUS/ROSTOCK/34) PRRP2_IAGU2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 119-146 POL SUB P2 A/GULL/MARYLAND/704/77) PRRP2_IAHLO RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/EQUINE/LONDON/1416/73) PRRP2_IAHTE RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/EQUINE/TENNESSEE/5/86) PRRP2_IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/KOREA/426/68) PRRP2_IALE1 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/LENINGRAD/134/57) PRRP2_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/LENINGRAD/134/17/57) PRRP2_IAMAN RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/MALLARD/NEW YORK/6750/78) PRRP2_IANT6 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/NT/60/68) PRRP2_IAP10 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/PINTAIL/ALBERTA/119/79) PRRP2_IAPUE RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/PUERTO RICO/8/34) PRRP2_IARUD RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/RUDDY TURNSTONE/NEW JERSEY/47/85) PRRP2_IASIN RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SINGAPORE/1/57) PRRP2_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/TURKEY/MINNESOTA/833/80) PRRP2_IAVI7 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 327-354 POL SUB P2 (STRAIN A/VICTORIA/3/75) PRRP2_IAWIL RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/WILSON-SMITH/33) PRRP2_IAZH2 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SWINE/HONG KONG/81/78) PRRP2_IAZH3 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SWINE/HONG KONG/126/82) PRRP2_IAZI1 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SWINE/IOWA/15/30) PRRP2_IAZTF RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SWINE/TENNESSEE/26/77) PRRP2_INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS 157-194 POL SUB P2 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP2_INBAD RNA-DIRECTED RNA INFLUENZA B VIRUS 164-194 POL SUB P2 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE) PRRP2_INBS1 RNA-DIRECTED RNA INFLUENZA B VIRUS 157-194 POL SUB P2 (STRAIN B/SINGAPORE/222/79) PRRP3_IABUD RNA-DIRECTED RNA INFLUENZA A VIRUS 537-567 POL SUB P3 (STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PRRP3_IACH1 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN A/CHILE/1/83) 331-358 POL SUB P3 PRRP3_IAHPR RNA-DIRECTED RNA INFLUENZA A VIRUS 331-361 480-507 POL SUB P3 (STRAIN A/EQUINE/PRAGUE/1/56) PRRP3_IAZTE RNA-DIRECTED RNA INFLUENZA A VIRUS 487-514 POL SUB P3 (STRAIN A/SWINE/TENNESSEE/24/77) PRRP3_INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS 2-33 472-509 POL SUB P3 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP3_INBAD RNA-DIRECTED RNA INFLUENZA B VIRUS 2-33 472-509 POL SUB P3 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE) PRRP3_INCBE RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN C/BERLIN/1/85) 509-536 POL SUB P3 PRRP3_INCJJ RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN C/JJ/50) 509-536 POL SUB P3 PRRP3_THOGV RNA-DIRECTED RNA THOGOTO VIRUS 149-176 358-385 POL SUB P3 PRRPA_CVH22 RNA-DIRECTED RNA HUMAN CORONAVIRUS (STRAIN 229E) 516-543 724-751 1971- 3781- POLYMERASE 2008 3811 PRRPA_CVMJH RNA-DIRECTED RNA MURINE CORONAVIRUS MHV (STRAIN JHM) 624-651 4326- POLYMERASE 4353 PRRPB_BEV RNA-DIRECTED RNA BERNE VIRUS 27-54 557-584 943-984 POLYMERASE PRRPB_CVMA5 RNA-DIRECTED RNA MURINE CORONAVIRUS MHV (STRAIN A59) 885-915 1129- POLYMERASE 1170 PRRPB_CVMJH RNA-DIRECTED RNA MURINE CORONAVIRUS MHV (STRAIN JHM) 885-915 1129- POLYMERASE 1170 PRRPB_CVPFS RNA-DIRECTED RNA PORCINE TRANSMISSIBLE GASTROENTERITIS 20-47 353-380 385-412 POLYMERASE CORONAVIRUS (STRAIN FS722 PRRPB_IBVB RNA-DIRECTED RNA AVIAN INFECTIOUS BRONCHITIS VIRUS 1510- 2296- 2547- POLYMERASE (STRAIN BEAUDETTE) 1547 2331 2574 PRRPB_IBVK RNA-DIRECTED RNA AVIAN INFECTIOUS BRONCHITIS VIRUS 165-200 416-443 POLYMERASE (STRAIN KB8523) PRRPL_BTV10 RNA-DIRECTED RNA BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 1032- POLYMERASE 1059 PRRPL_BUNYW RNA POLYMERASE BUNYAMWERA VIRUS 80-114 317-350 1802- 1892- 1861 1919 PRRPL_CDVO RNA POLYMERASE BETA CANINE DISTEMPER VIRUS (STRAIN 24-51 SUBUNIT ONDERSTEPOORT) PRRPL_HANTV RNA POLYMERASE HANTANN VIRUS (STRAIN 76-118) 404-433 461-510 564-591 738-765 905-946 1993- 2020 PRRPL_HRSVA RNA POLYMERASE BETA HUMAN RESPIRATORY SYNCYTIAL VIRUS 103-192 210-237 667-694 788-815 1007- 1138- 1453- 1776- 2062- SUBUNIT (STRAIN A2) 1034 1165 1480 1803 2089 PRRPL_MABVM RNA-DIRECTED RNA MARBURG VIRUS (STRAIN MUSOKE) 991-1018 1143- 1490- 1811- 2029- 2216- POLYMERASE 1170 1524 1838 2067 2266 PRRPL_MABVP RNA-DIRECTED RNA MARBURG VIRUS (STRAIN POPP) 991-1018 1490- 2239- POLYMERASE 1524 2267 PRRPL_MEASE RNA POLYMERASE BETA MEASLES VIRUS (STRAIN EDMONSTON) 95-122 196-223 2121- SUBUNIT 2148 PRRPL_MUMPM RNA POLYMERASE BETA MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 111-142 780-807 1602- SUBUNIT 1632 PRRPL_NDVB RNA POLYMERASE BETA NEWCASTLE DISEASE VIRUS (STRAIN 250-284 477-504 1979- SUBUNIT BEAUDETTE C/45) 2013 PRRPL_PI2HT RNA POLYMERASE BETA HUMAN PARAINFLUENZA 2 VIRUS (STRAIN 322-349 1564- 1687- 1901- SUBUNIT TOSHIBA) 1598 1721 1946 PRRPL_PI3H4 RNA POLYMERASE BETA HUMAN PARAINFLUENZA 3 VIRUS (STRAIN 52-86 136-163 608-638 1081- 1994- 2115- SUBUNIT NIH 47885) 1123 2036 2142 PRRPL_PUUMH RNA-DIRECTED RNA PUUMALA VIRUS (STRAIN HALLNAS B1) 388-415 557-591 731-758 864-891 926-953 1940- 1998- POLYMERASE 1971 2025 PRRPL_RABVP RNA POLYMERASE BETA RABIES VIRUS (STRAIN PV) 204-231 605-632 2068- SUBUNIT 2123 PRRPL_RABVS RNA POLYMERASE BETA RABIES VIRUS (STRAIN SAD B19) 204-231 605-632 2068- SUBUNIT 2123 PRRPL_RDV RNA-DIRECTED RNA RICE DWARF VIRUS 855-882 POLYMERASE PRRPL_RVFVZ RNA-DIRECTED RNA RIFT VALLEY FEVER VIRUS (STRAIN ZH-548 M12) 1536- 1653- POLYMERASE 1563 1687 PRRPL_SEND5 RNA POLYMERASE BETA SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 629-656 1082- 1729- 2145- SUBUNIT 1116 1756 2180 PRRPL_SENDE RNA POLYMERASE BETA SENDAI VIRUS (STRAIN ENDERS) 449-476 902-936 1549- 1965- SUBUNIT 1576 2000 PRRPL_SENDZ RNA POLYMERASE BETA SENDAI VIRUS (STRAIN 2) 629-656 1082- 1729- 2145- SUBUNIT 1116 1756 2180 PRRPL_SEOU8 RNA-DIRECTED RNA SEOUL VIRUS (STRAIN 80-39) 461-488 564-591 731-758 905-932 POLYMERASE PRRPL_SV5WR RNA POLYMERASE BETA SIMIAN VIRUS 5 (STRAIN 21004-WR) 1096- 1250- 1680- 2120- SUBUNIT 1123 1277 1710 2147 PRRPL_SYNV RNA POLYMERASE BETA SONCHUS YELLOW NET VIRUS 825-859 1092- 1490- 1973- 2080- SUBUNIT 1119 1520 2000 2107 PRRPL_TSWVB RNA-DIRECTEED RNA TOMATO SPOTTED WILT VIRUS (BRAZILIAN 477-504 542-573 1119- 1195- 1330- 1415- 1671- 1857- 2083- POLYMERASE ISOLATE CPNH1/BR-01) 1150 1229 1357 1442 1698 1884 2110 2166- 2324- 2771- 2193 2368 2798 PRRPL_UUK RNA POLYMERASE UUKUNIEMI VIRUS 142-187 1037- 1304- 1071 1331 PRRPL_VSVJH RNA POLYMERASE BETA VESICULAR STOMATITIS VIRUS (SEROTYPE 1530- 1809- SUBUNIT NEW JERSEY/STRAIN HAZELHU 1557 1836 PRRPL_VSVJO RNA POLYMERASE BETA VESICULAR STOMATITIS VIRUS (SEROTYPE 1205- 1809- SUBUNIT NEW JERSEY/STRAIN OGDEN) 1232 1836 PRRPL_VSVSJ RNA POLYMERASE BETA VESICULAR STOMATITIS VIRUS 1540- 1768- SUBUNIT (STRAIN SAN JUAN) 1567 1798 PRRPO_ACLSV RNA-DIRECTED RNA APPLE CHLOROTIC LEAF SPOT VIRUS 228-264 564-591 POLYMERASE PRRPO_BWYVF PUTATIVE RNA-DIR RNA POL BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 356-383 PRRPO_BYDV1 PUTATIVE RNA-DIR RNA POL BARLEY YELLOW DWARF VIRUS 772-799 (ISOLATE MAV-PS1) PRRPO_BYDVP PUTATIVE RNA-DIR RNA POL BARLEY YELLOW DWARF VIRUS (ISOLATE PAV) 772-799 PRRPO_BYDVR PUTATIVE RNA-DIR RNA POL BARLEY YELLOW DWARF VIRUS (ISOLATE P-PAV) 772-799 PRRPO_CARMV PUTATIVE RNA-DIR RNA POL CARNATION MOTTLE VIRUS 93-127 277-304 667-694 PRRPO_CGMVS PUTATIVE RNA-DIR RNA POL CUCUMBER GREEN MOTTLE MOSAIC VIRUS 387-414 1040- (WATERMELON STRAIN SH) 1067 PRRPO_IBDV5 PUTATIVE RNA-DIR RNA POL AVIAN INFECTIOUS BURSAL DISEASE VIRUS 336-363 392-419 (STRAIN 52/70) PRRPO_IBDVA PUTATIVE RNA-DIR RNA POL AVIAN INFECTIOUS BURSAL DISEASE VIRUS 661-688 717-744 (STRAIN AUSTRALIAN 002-73) PRRPO_IPNVJ PUTATIVE RNA-DIR RNA POL INFECTIOUS PANCREATIC NECROSIS VIRUS 773-800 (SEROTYPE JASPER) PRRPO_IPNVS PUTATIVE RNA-DIR RNA POL INFECTIOUS PANCREATIC NECROSIS VIRUS 773-800 (SEROTYPE SP) PRRPO_LYCVA RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 834-886 1052- (STRAIN ARMSTRONG) 1079 PRRPO_PPMVS PUTATIVE RNA-DIR RNA POL PEPPER MILD MOTTLE VIRUS (STRAIN SPAIN) 402-429 709-736 1072- 1099 PRRPO_REOVD RNA-DIRECTED RNA REOVIRUS (TYPE 3/STRAIN DEARING) 61-88 POLYMERASE PRRPO_REOVL RNA-DIRECTED RNA REOVIRUS (TYPE 1/STRAIN LANG) 61-88 POLYMERASE PRRPO_ROTBR RNA-DIR RNA POL BOVINE ROTAVIRUS (STRAIN RF) 68-95 218-245 791-818 SUBUNIT VP1 PRRPO_ROTBU RNA-DIR RNA POL BOVINE ROTAVIRUS (STRAIN UK) 65-95 218-245 791-841 975-1002 SUBUNIT VP1 PRRPO_ROTPC RNA-DIR RNA POL PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 3-44 75-102 363-390 543-585 SUBUNIT VP1 PRRPO_ROTPG RNA-DIR RNA POL PORCINE ROTAVIRUS (STRAIN GOTTFRIED 65-95 102-129 791-839 973-1002 SUBUNIT VP1 PRRPO_ROTS1 RNA-DIR RNA POL SIMIAN 11 ROTAVIRUS (STRAIN SA11) 65-95 791-839 975-1002 SUBUNIT VP1 PRRPO_SCVLA RNA-DIRECTED RNA SACCHAROMYCES CEREVISIAE VIRUS L-A 147-188 POLYMERASE PRRPO_TACV RNA POLYMERASE TACARIBE VIRUS 163-204 241-271 1107- 1978- 1134 2008 PRRPO_TMGMV PUTATIVE RNA-DIR RNA POL TOBACCO MILD GREEN MOSAIC VIRUS 230-257 1316- 1397- (TMV STRAIN U2) 1343 1424 PRRPP_BRSVA RNA POLYMERASE ALPHA BOVINE RESPIRATORY SYNCYTIAL VIRUS 99-133 SUBUNIT (STRAIN A51908) PRRPP_CDVO RNA POLYMERASE ALPHA CANINE DISTEMPER VIRUS (STRAIN 315-370 SUBUNIT ONDERSTEPOORT) PRRPP_HRSV RNA POLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-141 SUBUNIT PRRPP_HRSV1 RNA POLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-141 SUBUNIT (SUBGROUP B/STRAIN 18537) PRRPP_HRSVA RNA POLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-141 SUBUNIT (STRAIN A2) PRRPP_HRSVL RNA POLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-141 SUBUNIT (SUBGROUP A/STRAIN LONG) PRRPP_MEASE RNA POLYMERASE ALPHA MEASLES VIRUS (STRAIN EDMONSTON) 315-370 SUBUNIT PRRPP_MEASI RNA POLYMERASE ALPHA MEASLES VIRUS (STRAIN IP-3-CA) 315-370 SUBUNIT PRRPP_MEASY RNA POLYMERASE ALPHA MEASELS VIRUS (STRAIN YAMAGATA-1) 315-370 SUBUNIT PRRPP_PI1HB RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C35) 84-111 234-261 375-416 SUBUNIT PRRPP_PI1HC RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 84-111 234-261 375-416 SUBUNIT PRRPP_PI1HD RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 VIRUS (STRAIN 84-111 232-262 375-416 SUBUNIT CI-5/73) PRRPP_PI1HE RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 VIRUS (STRAIN 84-111 244-271 375-416 SUBUNIT CI-14/83) PRRPP_PI2H RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 167-194 222-256 SUBUNIT PRRPP_PI2HT RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 167-194 222-256 SUBUNIT (STRAIN TOSHIBA) PRRPP_PI3B RNA POLYMERASE ALPHA BOVINE PARAINFLUENZA 3 VIRUS 34-91 255-282 285-314 SUBUNIT PRRPP_PI3H4 RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 3 VIRUS 114-144 269-299 SUBUNIT (STRAIN NIH 47885) PRRPP_PI4HA RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 4A VIRUS 4-38 SUBUNIT (STRAIN TOSHIBA) PRRPP_RABVP RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN PV) 93-127 SUBUNIT PRRPP_SEND5 RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 330-357 379-420 SUBUNIT PRRPP_SEND6 RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN 6/94) 330-357 379-420 SUBUNIT PRRPP_SENDF RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN FUSHIMI) 330-357 379-420 SUBUNIT PRRPP_SENDH RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN HARRIS) 330-357 379-420 SUBUNIT PRRPP_SENDZ RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN Z) 330-357 379-420 SUBUNIT PRRPP_SV5 RNA POLYMERASE ALPHA SIMIAN VIRUS 5 (STRAIN W3) 205-232 236-263 SUBUNIT PSODC_VACCV SUPEROXIDE DISMUTASE VACCINIA VIRUS (STRAIN WR) 72-99 LIKE PROTEIN PSODC_VARV SUPEROXIDE DISMUTASE VARIOLA VIRUS 72-99 LIKE PROTEIN PSPHR_AMEPV SPHEROIDIN AMSACTA MOOREI ENTOMOPOXVIRUS 91-118 140-167 227-261 361-390 PSPI1_MYXVL SERPIN 1 MYXOMA VIRUS (STRAIN LAUSANNE) 286-313 PSPI2_VACCV SERINE PROTEINASE VACCINIA VIRUS (STRAIN WR) 59-86 INHIBITOR 2 PSPIA_VACCC SERINE PROTEASE INH 2 VACCINIA VIRUS (STRAIN COPENHAGEN) 18-65 HOMOLOG PT2C2_CHVP1 TYPE II RESTRICTION ENZYME PARAMECIUM BURSARIA CHLORELLA VIRUS 1 16-43 CVIAII PTAA2_VACCV TRANS-ACTIVATOR VACCINIA VIRUS 95-133 PROTEIN A2 PTAG8_FOWPV TRANS-ACTIVATOR FOWLPOX VIRUS 3-51 PROTEIN FP0 PTAG8_VACCV TRANS-ACTIVATOR VACCINIA VIRUS 3-30 PROTEIN GK1 PTAG8_VARV TRANS-ACTIVATOR VARIOLA VIRUS 3-30 PROTEIN GK1 PTALA_BFDV LARGE T ANTIGEN BUDGERIGAR FLEDGLING DISEASE VIRUS 291-318 PTALA_POVBO LARGE T ANTIGEN BOVINE POLYOMAVIRUS 502-537 PTALA_POVHA LARGE T ANTIGEN HAMSTER POLYOMAVIRUS 587-621 PTALA_POVLY LARGE T ANTIGEN LYMPHOTROPIC POLYOMAVIRUS 224-258 616-684 PTALA_POVM3 LARGE T ANTIGEN MOUSE POLYOMA VIRUS (STRAIN 3) 513-540 PTALA_POVMA LARGE T ANTIGEN MOUSE POLYOMA VIRUS (STRAIN A2) 511-538 PTALA_POVMC LARGE T ANTIGEN MOUSE POLYOMA VIRUS (STRAIN CRAWFORD 508-535 SMALL-PLAQUE) PTATR_NPVAC TRANS-ACT TRANS REG AUTOGRAPHA CALIFORNICA NUCLEAR 407-434 489-523 532-559 PROTEIN POLYHEDROSIS VIRUS PTATR_NPVBM TRANS-ACT TRANS REG BOMBYX MORI NUCLEAR POLYHEDROSIS VIRUS 412-439 494-528 537-564 PROTEIN PTATR_NPVOP TRANS-ACT TRANS REG ORGYIA PSEUDOTSUGATA MULTICAPSID 512-554 PROTEIN POLYHEDROSIS VIRUS PTEGU_EBV LARGE TEGUMENT PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 145-172 1215- 1344- 1876- 1242 1371 1903 PTEGU_HCMVA PROBABLE LARGE TEGUMENT HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 1251- 2202- PROTEIN 1281 2229 PTEGU_HSV11 LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 667-694 1673- 1710 PTEGU_HSV6G LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 102-129 228-262 567-611 962-993 1098- 1661- 1884- 1181 1688 1911 PTEGU_HSVEB LARGE TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 229-256 566-593 1205- 1232 PTEGU_HSVSA PROBABLE LARGE TEGUMENT HERPESVIRUS SAIMIRI (STRAIN 11) 524-607 672-700 777-814 846-898 949-986 990-1017 1467- 2102- PROTEIN 1497 2135 PTEGU_VZVD LARGE TEGUMENT PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 1121- 1579- 1158 1609 PTERM_ADE07 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 7 375-413 PTMAF_AVIS4 TRANSFORMING PROTEIN MAF AVIAN MUSCULOAPONEUROTIC FIBROSARCOMA 302-336 VIRUS AS42 PTOP1_SFVKA DNA TOPOISOMERASE I SHOPE FIBROMA VIRUS (STRAIN KASZA) 38-65 132-176 PTOP1_VACCV DNA TOPOISOMERASE I VACCINIA VIRUS 38-65 PTOP1_VARV DNA TOPOISOMERASE I VARIOLA VIRUS 38-65 PTOP2_ASFM2 DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS (ISOLATE MALAWI 902-936 LIL 20/1) PTYSY_HSVAT THYMIDYLATE SYNTHASE HERPESVIRUS ATELES 116-143 PTYSY_HSVSA THYMIDYLATE SYNTHASE HERPESVIRUS SAIMIRI (STRAIN 11) 120-147 PUL06_EBV VIRION PROTEIN BBRF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 115-142 313-340 542-569 PUL06_HSV11 VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 586-613 PUL06_HSVEB VIRION GENE 56 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 640-667 PUL06_HSVSA VIRION GENE 43 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 15-42 302-358 368-402 PUL08_HCMVA HYPOTHETICAL PROTEIN UL8 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 6-47 PUL11_EBV HYPOTHETICAL PROTEIN BBLF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 15-42 PUL13_HCMVA HYPOTHETICAL PROTEIN UL13 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 347-374 PUL14_HSVEB HYPOTHETICAL GENE 48 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 247-286 PROTEIN PUL14_VZVD HYPOTHETICAL GENE 46 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 64-101 PROTEIN PUL16_HCMVA HYPOTHETICAL PROTEIN UL16 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 81-112 PUL20_HCMVA HYPOTH PRO UL20 PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 34-61 PUL21_HSVEB GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 44-71 PUL21_VZVD GENE 38 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 380-407 PUL25_HSVSA VIRION GENE 19 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 34-61 204-231 362-389 PUL31_HCMVA HYPOTHETICAL PROTEIN UL31 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 167-194 254-284 PUL32_HSVEB MAJOR ENVELOPE EQUINE HERPESVIRUS TYPE 1 345-375 GLYCOPROTEIN 300 PUL34_HSV11 VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 116-143 PUL34_HSVSA GENE 67 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 208-235 PUL34_VZVD VIRION GENE 34 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 112-139 PUL35_HCMVA HYPOTHETICAL PROTEIN UL35 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 535-562 PUL37_HSV11 PROTEIN UL37 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 470-497 853-884 PUL37_HSVEB GENE 23 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 715-749 987-1014 PUL37_HSVSA GENE 63 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 31-65 685-737 PUL37_VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 107-134 485-512 719-746 976-1003 PUL41_VZVD HOST SHUTOFF VIRION VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 330-364 PROTEIN PUL42_HSV11 DNA-BINDING PROTEIN UL42 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 231-258 PUL43_VZVD GENE 15 MEMBRANE PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 129-156 312-349 PUL47_HCMVA PROTEIN UL47 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 114-148 448-485 763-790 802-853 PUL47_HSV11 VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 448-515 PUL47_HSV1F VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F) 488-515 PUL47_HSVE4 97 KD ALPHA TRANS- EQUINE HERPESVIRUS TYPE 4 190-217 INDUCING PROTEIN PUL50_HCMVA PROTEIN UL50 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 159-186 PUL52_EBV PROB DNA REPLICATION EPSTEIN-BARR VIRUS (STRAIN B95-8) 185-212 787-814 PROTEIN B SLF1 PUL52_HSVEB DNA REPLICATION EQUINE HERPESVIRUS TYPE 1 (STRAIN AB41′) 193-220 943-970 PROTEIN UL52 PUL52_HSVSA PROB DNA REP GENE 56 HERPESVIRUS SAIMIRI (STRAIN 11) 130-157 PROTEIN PUL52_VZVD PROB DNA REP GENE 6 VARICELLA-ZOSTER VIRUS 301-337 PROTEIN (STRAIN DUMAS) PUL59_HCMVA HYPOTHETICAL PROTEIN UL59 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 74-101 PUL70_HCMVA PROB DNA REP PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 65-92 UL70 PUL73_HCMVA UL73 GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 5-73 PRECURSOR PUL73_HSVSA HYPOTHETICAL GENE 53 HERPESVIRUS SAIMIRI (STRAIN 11) 9-36 PROTEIN PUL74_HCMVA HYPOTHETICAL PROTEIN UL74 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 45-79 PUL87_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 409-436 B(C)RF1 PUL87_HSV6U HYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 536-563 729-768 UGANDA-1102) PUL87_HSVSA HYPOTHETICAL GENE 24 HERPRESVIRUS SAIMIRI (STRAIN 11) 582-609 PROTEIN PUL92_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 107-144 168-196 BDLF4 PUL92_HSVSA HYPOTHETICAL GENE 31 HERPESVIRUS SAIMIRI (STRAIN 11) 92-122 PROTEIN PUL93_HCMVA PROTEIN UL93 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 26-53 314-381 PUL95_HCMVA HYPOTHETICAL PROTEIN UL95 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 37-71 PUL95_HSV6U HYPOTHETICAL PROTEIN 13R HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 73-100 105-134 UGANDA-1102) PULA4_HCMVA VIRION PROTEIN UL104 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 4-31 443-477 PULB9_HCMVA HYPOTHETICAL PROTEIN UL119 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 33-78 PULD0_HCMVA HYPOTHETICAL PROTEIN UL130 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 90-124 PUNG_HSVSA URACIL-DNA GLYCOSYLASE HERPESVIRUS SAIMIRI (STRAIN 11) 135-176 PUNG_SFVKA URACIL-DNA GLYCOSYLASE SHOPE FIBROMA VIRUS (STRAIN KASZA) 81-115 PUNG_VACCC URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN COPENHAGEN) 85-116 129-156 PUNG_VACCV URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN WR) 85-116 129-156 PUNG_VARV URACIL-DNA GLYCOSYLASE VARIOLA VIRUS 85-116 PUS09_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 20-47 HXLF3 PUS14_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 277-308 HVLF4 PUS18_HCMVA MEMBRANE PROTEIN HWLF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 191-218 PV121_ASFL5 LIS 121-1 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN LIS57) 2-29 PV125_AMVLE 125 KD PROTEIN ALFALFA MOSAIC VIRUS (STRAIN 425/ISOLATE 702-729 LEIDEN) PV137_ASFL5 LIS 137 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN LIS57) 2-29 PV13K_TRVPL 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PLB) 59-86 PV143_NPVAC HELICASE AUTOGRAPHA CALIFORNICA NUCLEAR 496-560 945-972 POLYHEDROSIS VIRUS PV16K_TRVPS 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PSG) 79-113 PV1A_BBMV 1A PROTEIN BROAD BEAN MOTTLE VIRUS 23-54 710-737 840-868 PV1A_BMV 1A PROTEIN BROME MOSAIC VIRUS 22-58 384-411 836-863 892-919 PV1A_CCMV 1A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 249-276 PV1A_CMVFN 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 11-38 PV1A_CMVO 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN O) 11-38 864-902 PV1A_CMVQ 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Q) 11-38 PV1A_PSVJ 1A PROTEIN PEANUT STUNT VIRUS (STRAIN J) 4-38 372-399 PV1A_TAV 1A PROTEIN TOMATO ASPERMY VIRUS 11-38 271-298 376-403 857-884 PV25K_NPVAC 25 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 4-31 POLYHEDROSIS VIRUS PV29K_PEBV 29.6 KD PROTEIN PEA EARLY BROWNING VIRUS 140-170 PV29K_TRVSY 29 KD PROTEIN TOBACCO RATTLE VIRUS 170-197 PV29K_TRVTC 29 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 48-75 PV2A_BBMV 2A PROTEIN BROAD BEAN MOTTLE VIRUS 301-328 PV2A_CCMV 2A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 178-205 PV2A_CMVFN 2A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 792-819 PV2A_PSVJ 2A PROTEIN PEANUT STUNT VIRUS (STRAIN J) 325-352 717-751 PV2A_TAV 2A PROTEIN TOMATO ASPERMY VIRUS 313-340 722-756 PV30K_HCMVE 30 KD MAJOR EARLY PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN 194-221 EISENHARDT) PV30K_TRVTC 29.1 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 130-160 PV33P_ADE41 33 KD PHOSPHOPROTEIN HUMAN ADENOVIRUS TYPE 41 15-42 PV362_ASFB7 K′362 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 75-102 PV363_ASFB7 D′363 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 3-30 172-199 PV3A_BMV 3A PROTEIN BROME MOSAIC VIRUS 11-38 PV3A_CMVFN 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 222-252 PV3A_CMVM 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN M) 217-252 PV3A_CMVO 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN O) 222-253 PV3A_CMVY 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Y) 222-253 PV3A_IBVB 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 25-57 (STRAIN BEAUDETTE) PV3A_IBVU5 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 29-56 (STRAIN UK/183/66) PV3B_IBVB 3B PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 6-33 (STRAIN BEAUDETTE) PV50K_BYDVP 50 KD PROTEIN BARLEY YELLOW DWARF VIRUS (ISOLATE PAV) 119-146 PV51K_BWYVF 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 113-147 424-451 PV51K_BWYVG 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE GB1) 113-147 424-451 PV56K_PLRV1 56 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 124-151 438-472 PV56K_PLRVW 56 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN WAGENINGEN) 124-151 438-472 PV58K_BSMV 58 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS 128-155 PV70K_PLRV1 69.7 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 110-140 PV70K_PLRVW 69.7 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN WAGENINGEN) 110-140 PV90K_AMVLE 90 KD PROTEIN ALFALFA MOSAIC VIRUS (STRAIN 425/ 107-134 ISOLATE LEIDEN) PVA06_VACCC PROTEIN A6 VACCINIA VIRUS (STRAIN COPENHAGEN) 157-216 250-277 283-310 314-355 PVA06_VACCV PROTEIN A6 VACCINIA VIRUS (STRAIN WR) 156-215 249-276 282-309 313-354 PVA06_VARV PROTEIN A6 VARIOLA VIRUS 157-216 250-277 283-310 314-355 PVA08_VACCC PROTEIN A8 VACCINIA VIRUS (STRAIN COPENHAGEN) 176-206 PVA08_VARV PROTEIN A8 VARIOLA VIRUS 176-206 PVA09_VARV PROTEIN A9 VARIOLA VIRUS 60-95 PVA11_VACCC PROTEIN A11 VACCINIA VIRUS (STRAIN COPENHAGEN) 219-283 PVA11_VARV PROTEIN A11 VARIOLA VIRUS 220-284 PVA18_VARV 56 KD ABORTIVE LATE PROTEIN VARIOLA VIRUS 440-467 PVA20_VACCC PROTEIN A20 VACCINIA VIRUS (STRAIN COPENHAGEN) 8-67 330-357 PVA20_VARV PROTEIN A20 VARIOLA VIRUS 8-67 330-357 PVA22_VACCC PROTEIN A22 VACCINIA VIRUS (STRAIN COPENHAGEN) 45-72 PVA22_VARV PROTEIN A22 VARIOLA VIRUS 56-83 PVA23_VACCC PROTEIN A23 VACCINIA VIRUS (STRAIN COPENHAGEN) 95-144 PVA23_VARV PROTEIN A23 VARIOLA VIRUS 95-144 PVA28_VACCV PROTEIN A28 VACCINIA VIRUS (STRAIN WR) 22-49 PVA28_VARV PROTEIN A28 VARIOLA VIRUS 22-49 PVA30_VACCV PROTEIN A30 VACCINIA VIRUS (STRAIN WR) 12-55 PVA31_VACCC PROTEIN A31 VACCINIA VIRUS (STRAIN COPENHAGEN) 88-115 PVA31_VARV PROTEIN A31 VARIOLA VIRUS 88-122 PVA34_VACCC PROTEIN A34 VACCINIA VIRUS (STRAIN COPENHAGEN) 87-114 PVA34_VACCV PROTEIN A34 VACCINIA VIRUS (STRAIN WR) 87-114 PVA34_VARV PROTEIN A34 VARIOLA VIRUS 87-114 PVA36_VACCV PROTEIN A36 PRECURSOR VACCINIA VIRUS (STRAIN WR) 120-155 PVA36_VARV PROTEIN A36 PRECURSOR VARIOLA VIRUS 127-154 PVA38_VACCC PROTEIN A38 VACCINIA VIRUS (STRAIN COPENHAGEN) 44-81 PVA38_VACCV PROTEIN A38 VACCINIA VIRUS (STRAIN WR) 44-81 PVA38_VARV PROTEIN A38 VARIOLA VIRUS 44-91 PVA39_VACCC PROTEIN A39 VACCINIA VIRUS (STRAIN COPENHAGEN) 37-71 155-182 PVA39_VACCV PROTEIN A39 VACCINIA VIRUS (STRAIN WR) 75-109 193-220 PVA43_VACCC PROTEIN A43 VACCINIA VIRUS (STRAIN COPENHAGEN) 145-172 PVA43_VACCV PROTEIN A43 VACCINIA VIRUS (STRAIN WR) 145-172 PVA43_VARV PROTEIN A43 VARIOLA VIRUS 146-173 PVA47_VACCC PROTEIN A47 VACCINIA VIRUS (STRAIN COPENHAGEN) 143-184 PVA47_VACCV PROTEIN A47 VACCINIA VIRUS (STRAIN WR) 143-184 PVA47_VARV PROTEIN A47 VARIOLA VIRUS 142-184 PVA49_VACCC PROTEIN A49 VACCINIA VIRUS (STRAIN COPENHAGEN) 61-91 PVA49_VACCV PROTEIN A49 VACCINIA VIRUS (STRAIN WR) 61-91 PVA49_VARV PROTEIN A49 VARIOLA VIRUS 61-91 PVA55_VACCC PROTEIN A55 VACCINIA VIRUS (STRAIN COPENHAGEN) 55-82 126-156 435-462 PVA55_VACCV PROTEIN A55 VACCINIA VIRUS (STRAIN WR) 55-82 126-156 435-462 PVAL1_BCTV AL1 PROTEIN BEET CURLY TOP VIRUS 22-49 PVAL3_CLVK AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN WEST 79-106 KENYAN 844) PVAL3_CLVN AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN NIGERIAN) 79-106 PVAL3_SLCV AL3 PROTEIN SQUASH LEAF CURL VIRUS 101-128 PVAL3_TYLCV AL3 PROTEIN TOMATO YELLOW LEAF CURL VIRUS 79-129 PVAT_CAMVC APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841) 22-70 93-129 PVAT_CAMVD APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 22-70 PVAT_CAMVE APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC) 22-70 93-129 PVAT_CAMVN APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153) 22-70 93-129 PVAT_CAMVP APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN PV147) 22-70 93-129 PVAT_CAMVS APHID TRANSMISSION PROTEIN 22-70 93-130 PVAT_CAMVW APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN W260) 36-70 PVAT_CERV APHID TRANSMISSION PROTEIN CARNATION ETCHED RING VIRUS 102-138 PVAT_FMVD APHID TRANSMISSION PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 52-82 103-130 PVB03_VACCV PROTEIN B3 VACCINIA VIRUS (STRAIN WR) 108-135 PVB04_VACCC PROTEIN B4 VACCINIA VIRUS (STRAIN COPENHAGEN) 92-123 182-211 286-313 324-361 PVB04_VACCV PROTEIN B4 VACCINIA VIRUS (STRAIN WR) 92-123 182-211 286-313 324-361 PVB04_VARV PROTEIN B4 VARIOLA VIRUS 89-127 182-211 286-313 324-361 PVB05_VACC0 PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN LC16MO) 254-284 PRO PREC PVB05_VACCC PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN COPENHAGEN) 254-284 PRO PREC PVB05_VACCL PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN LISTER) 254-284 PRO PREC PVB05_VACCV PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN WR) 254-284 PRO PREC PVB07_VACCV PROTEIN B7 PRECURSOR VACCINIA VIRUS (STRAIN WR) 28-62 PVB08_VACCC PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 26-53 PVB08_VACCV PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAIN WR) 26-53 PVB11_VACCC PROTEIN B11 VACCINIA VIRUS (STRAIN COPENHAGEN) 21-54 PVB11_VACCV PROTEIN B11 VACCINIA VIRUS (STRAIN WR) 5-38 PVB16_COWPX IL-1 BIND PRO PRECURSOR COWPOX VIRUS 113-140 PVB17_VACCC PROTEIN B17 VACCINIA VIRUS (STRAIN COPENHAGEN) 258-285 PVB17_VACCV PROTEIN B17 VACCINIA VIRUS (STRAIN WR) 258-285 PVB18_VACCC PROTEIN B18 VACCINIA VIRUS (STRAIN COPENHAGEN) 337-375 PVB18_VACCV PROTEIN B18 VACCINIA VIRUS (STRAIN WR) 337-375 PVB18_VARV PROTEIN B18 VARIOLA VIRUS 337-378 PVB19_VACCC SURFACE ANTIGEN S VACCINIA VIRUS (STRAIN COPENHAGEN) 182-212 PRECURSOR PVB19_VACCD SURFACE ANTIGEN S VACCINIA VIRUS (STRAIN DAIREN I) 180-210 PRECURSOR PVB19_VACCV SURFACE ANTIGEN S VACCINIA VIRUS (STRAIN WR) 180-210 PRECURSOR PVB19_VARV SURFACE ANTIGEN S VARIOLA VIRUS 180-210 PRECURSOR PVB20_VACCC PROTEIN B20 VACCINIA VIRUS (STRAIN COPENHAGEN) 48-82 PVB21_VACCV PROTEIN B21 VACCINIA VIRUS (STRAIN WR) 64-91 PVBL1_BGMV BL1 PROTEIN BEAN GOLDEN MOSAIC VIRUS 120-147 248-275 PVBL1_CLVK BL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN WEST 118-145 KENYAN 844) PVBL1_CLVN BL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN NIGERIAN) 118-145 PVBL1_PYMVV BL1 PROTEIN POTATO YELLOW MOSIAC VIRUS (ISOLATE 120-147 VENEZUELA) PVC02_VACCC PROTEIN C2 VACCINIA VIRUS (STRAIN COPENHAGEN) 405-432 PVC02_VACCV PROTEIN C2 VACCINIA VIRUS (STRAIN WR) 41-71 405-432 PVC04_SFVKA PROTEIN C4 SHOPE FIBROMA VIRUS (STRAIN KASZA) 209-236 484-515 PVC04_VACCC PROTEIN C4 VACCINIA VIRUS (STRAIN COPENHAGEN) 12-46 PVC04_VACCV PROTEIN C4 VACCINIA VIRUS (STRAIN WR) 12-16 PVC04_VARV PROTEIN C4 VARIOLA VIRUS 12-46 PVC05_SFVKA HYPOTHETICAL PROTEIN C5 SHOPE FIBROMA VIRUS (STRAIN KASZA) 85-125 152-179 PVC05_VACCC PROTEIN C5 VACCINIA VIRUS (STRAIN COPENHAGEN) 38-65 PVC05_VACCV PROTEIN C5 VACCINIA VIRUS (STRAIN WR) 38-65 PVC05_VARV PROTEIN C5 VARIOLA VIRUS 36-66 PVC07_VACCV PROTEIN C7 VACCINIA VIRUS (STRAIN WR) 80-111 PVC07_VARV PROTEIN C7 VARIOLA VIRUS 80-111 PVC09_VACCC PROTEIN C9 VACCINIA VIRUS (STRAIN COPENHAGEN) 42-69 82-116 178-205 252-279 289-325 575-605 PVC09_VACCV PROTEIN C9 VACCINIA VIRUS (STRAIN WR) 42-69 82-116 178-205 252-279 289-325 575-605 PVC10_VACCC PROTEIN C10 VACCINIA VIRUS (STRAIN COPENHAGEN) 136-180 PVC10_VACCV PROTEIN C10 VACCINIA VIRUS (STRAIN WR) 136-163 PVC10_VARV PROTEIN C10 VARIOLA VIRUS 136-163 PVC13_SFVKA PROTEIN C13 SHOPE FIBROMA VIRUS (STRAIN KASZA) 3-30 39-66 137-182 206-240 PVC17_VACCC PROTEIN C17/B23 VACCINIA VIRUS (STRAIN COPENHAGEN) 111-152 PVC18_VACCC PROTEIN C18/B24 VACCINIA VIRUS (STRAIN COPENHAGEN) 40-74 PVC19_SFVKA PROTEIN C19 SHOPE FIBROMA VIRUS (STRAIN KASZA) 56-97 PVC20_VACCC PROTEIN C20/B26 VACCINIA VIRUS (STRAIN COPENHAGEN) 72-99 PVC22_VARV PROTEIN C22/B28 HOMOLOG VARIOLA VIRUS 299-326 PVCAP_EBV MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 847-874 PVCAP_HSV6U MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 136-170 355-382 UGANDA-1102) PVCAP_HSVSA MAJOR CAPSID PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 769-799 PVCG3_NPVAC DNA-BINDING PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 133-165 199-248 POLYHEDROSIS VIRUS PVCOM_ADE02 MINOR CORE PROTEIN HUMAN ADENOVIRUS TYPE 2 88-115 PVCOM_ADE05 MINOR CORE PROTEIN HUMAN ADENOVIRUS TYPE 5 87-114 PVD05_FOWP1 92.6 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 6-33 184-211 321-348 PVD05_VACCC PROTEIN D5 VACCINIA VIRUS (STRAIN COPENHAGEN) 240-267 333-360 PVD05_VACCV PROTEIN D5 VACCINIA VIRUS (STRAIN WR) 240-267 PVD05_VARV PROTEIN D5 VARIOLA VIRUS 240-267 PVD09_VACCC PROTEIN D9 VACCINIA VIRUS (STRAIN COPENHAGEN) 123-150 PVD09_VACCV PROTEIN D9 VACCINIA VIRUS (STRAIN WR) 123-150 PVD09_VARV PROTEIN D9 VARIOLA VIRUS 123-160 PVD10_SFVKA PROTEIN D10 SHOPE FIBROMA VIRUS (STRAIN KASZA) 18-52 PVDBP_CERV DNA-BINDING PROTEIN CARNATION ETCHED RING VIRUS 2-35 PVE02_VARV PROTEIN E2 VARIOLA VIRUS 282-322 PVE06_VACCC PROTEIN E6 VACCINIA VIRUS (STRAIN COPENHAGEN) 89-116 437-464 PVE06_VACCV PROTEIN E6 VACCINIA VIRUS (STRAIN WR) 89-116 437-464 PVE06_VARV PROTEIN E6 VARIOLA VIRUS 89-116 367-394 437-464 PVE1_HPV18 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 60-87 PVE1_HPV2A E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 2A 21-48 PVE1_HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 180-207 PVE1_HPV39 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 103-130 PVE1_HPV41 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 55-89 PVE1_HPV42 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 42 25-59 PVE1_HPV47 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 146-173 PVE1_HPV57 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57 21-48 PVE26_NPVAC EARLY 25.9 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 72-113 POLYHEDROSIS VIRUS PVE2_CRPVK PROBABLE E2 PROTEIN COTTONTAIL RABBIT (SHOPE) PAPILLOMAVIRUS 5-34 (STRAIN KANSAS) PVE2_HPV05 PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5 17-51 PVE2_HPV13 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 13 157-184 334-361 PVE2_HPV16 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 16 61-105 312-342 PVE2_HPV18 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 313-340 PVE2_HPV1A E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 159-186 PVE2_HPV2A E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 2A 159-193 PVE2_HPV33 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 304-331 PVE2_HPV35 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 158-192 327-354 PVE2_HPV39 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 7-34 323-357 PVE2_HPV47 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 17-51 148-175 276-303 PVE2_HPV51 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 137-184 PVE2_HPV57 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57 166-193 PVE2_HPV58 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 2-36 309-336 PVE2_HPV5B PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 17-51 PVE2_PAPVE PROBABLE E2 PROTEIN EUROPEAN ELK PAPILLOMAVIRUS 120-150 PVE2_PCPV1 E2 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS TYPE 1 267-294 327-361 PVE4_HPV05 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5 202-229 PVE4_HPV11 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11 81-108 PVE4_HPV16 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 16 66-93 PVE4_HPV18 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 59-86 PVE4_HPV31 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 75-102 PVE4_HPV41 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 63-97 PVE4_HPV5B PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 202-229 PVE5A_HPV11 PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11 30-60 PVE5A_HPV6B PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B 30-60 PVE5A_HPV6C PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6C 30-60 PVE5_HPV35 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 27-54 PVE5_HPV5B PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 11-41 PVE5_PCPV1 PROBABLE E5 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS TYPE 1 35-62 PVE6_HPV18 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 75-102 PVE6_HPV31 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 69-96 PVE6_HPV39 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 71-102 PVE6_HPV41 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 119-146 PVE6_HPV45 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 45 75-102 PVE6_HPV51 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 72-99 PVE6_HPVME E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE ME180 71-102 PVE94_NPVAC EARLY 94 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 620-647 POLYHEDROSIS VIRUS PVEF_GVTN VIRAL ENHANCING FACTOR TRICHOPLUSIA NI GRANULOSIS VIRUS 411-438 PVENV_DHV11 ENVELOPE GLYCOPROTEIN DHORI VIRUS (STRAIN INDIAN/1313/61) 318-366 PRECURSOR PVENV_EAV PROBABLE ENVELOPE PROTEIN EQUINE ARTERITIS VIRUS 120-147 PVENV_THOGV ENVELOPE GLYCOPROTEIN THOGOTO VIRUS 313-347 PRECURSOR PVF03_VACCC PROTEIN F3 VACCINIA VIRUS (STRAIN COPENHAGEN) 71-110 185-212 PVF03_VACCV PROTEIN F3 VACCINIA VIRUS (STRAIN WR) 71-110 185-212 PVF05_VACCP 36 KD MAJOR MEMBRANE VACCINIA VIRUS (STRAIN L-IVP) 33-60 PRO PRECURSO PVF05_VACCV 36 KD MAJOR MEMBRANE VACCINIA VIRUS (STRAIN WR) 33-60 PRO PRECURSO PVF06_VARV PROTEIN F6 VARIOLA VIRUS 10-44 PVF11_VACCC PROTEIN F11 VACCINIA VIRUS (STRAIN COPENHAGEN) 274-321 PVF11_VACCP PROTEIN F11 VACCINIA VIRUS (STRAIN L-IVP) 270-317 PVF11_VARV PROTEIN F11 VARIOLA VIRUS 274-321 PVF12_VACCC PROTEIN F12 VACCINIA VIRUS (STRAIN COPENHAGEN) 10-37 113-140 554-581 PVF12_VACCP PROTEIN F12 VACCINIA VIRUS (STRAIN L-IVP) 10-37 113-140 554-581 PVF12_VARV PROTEIN F12 VARIOLA VIRUS 10-37 202-236 554-581 PVF16_VACCC PROTEIN F16 VACCINIA VIRUS (STRAIN COPENHAGEN) 35-62 152-179 PVF16_VACCP PROTEIN F16 VACCINIA VIRUS (STRAIN L-IVP) 35-62 152-179 PVF16_VARV PROTEIN F16 VARIOLA VIRUS 35-62 149-179 PVFP4_FOWPV PROTEIN FP4 FOWLPOX VIRUS 146-173 PVFUS_ORNFNZ 10 KD FUSION PROTEIN ORF VIRUS (STRAIN NZ2) 59-86 PVFUS_VACCC 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 37-64 PVFUS_VACCV KD FUSION PROTEIN VACCINIA VIRUS (STRAIN WR) 37-64 PVG01_VACCC PROTEIN G1 VACCINIA VIRUS (STRAIN COPENHAGEN) 225-252 301-335 PVG01_VACCV PROTEIN G1 VACCINIA VIRUS (STRAIN WR) 164-191 240-274 PVG01_VARV PROTEIN G1 VARIOLA VIRUS 225-252 301-335 PVG02_VACCV ISATIN-B-TSC DEP PROTEIN VACCINIA VIRUS (STRAIN WR) 96-123 PVG02_VARV ISATIN-B-TSC DEP PROTEIN VARIOLA VIRUS 96-123 PVG03_HSVEB GENE 3 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 146-176 PVG03_HSVEK GENE 3 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN 146-176 KENTUCKY A) PVG05_VACCC PROTEIN G5 VACCINIA VIRUS (STRAIN COPENHAGEN) 48-75 131-161 225-289 355-389 PVG05_VARV PROTEIN G5 VARIOLA VIRUS 48-75 124-161 255-289 355-389 PVG07_HSVI1 HYPOTH GENE 7 MEMB PRO ICTALURID HERPESVIRUS 1 71-98 PVG09_VACCC PROTEIN F1 VACCINIA VIRUS (STRAIN COPENHAGEN) 308-338 PVG09_VACCV PROTEIN F1 VACCINIA VIRUS (STRAIN WR) 271-301 PVG09_VARV PROTEIN F1 VARIOLA VIRUS 308-338 PVG12_SPVIR GENE 12 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 11-45 PVG17_HSVI1 HYPOTHETICAL GENE 17 ICTALURID HERPESVIRUS 1 177-204 PROTEIN PVG18_HSVI1 HYPOTHETICAL GENE 18 ICTALURID HERPESVIRUS 1 174-208 PROTEIN PVG1_SPVIR CAPSID PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 260-287 PVG1_SPV4 CAPSID PROTEIN SPIROPLASMA VIRUS 4 287-314 383-410 PVG22_HSVI1 HYPOTHETICAL GENE 22 ICTALURID HERPESVIRUS 1 373-400 581-622 668-705 766-824 PROTEIN PVG24_HSVI1 HYPOTHETICAL GENE 24 ICTALURID HERPESVIRUS 1 31-58 PROTEIN PVG28_HSVI1 HYPOTHETICAL GENE 28 ICTALURID HERPESVIRUS 1 253-290 497-528 PROTEIN PVG2R_AMEPV HYPOTHETICAL G2R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS 33-64 91-118 PVG2_SPV1R GENE 2 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 285-326 PVG2_SPV4 GENE 2 PROTEIN SPIROPLASMA VIRUS 4 146-173 175-205 262-310 PVG34_HSVI1 HYPOTHETICAL GENE 34 ICTALURID HERPESVIRUS 1 95-122 PROTEIN PVG37_HSVI1 HYPOTHETICAL GENE 37 ICTALURID HERPESVIRUS 1 442-469 PROTEIN PVG39_HSVI1 HYPOTHETICAL GENE 39 ICTALURID HERPESVIRUS 1 651-678 1088- PROTEIN 1115 PVG3L_AMEPV HYPOTHETICAL G3L PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS 2-29 PVG3_SPVIR GENE 3 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 15-49 PVG3_SPV4 GENE 3 PROTEIN SPIROPLASMA VIRUS 4 18-52 87-148 PVG45_HSVSA HYPOTHETICAL GENE 45 HERPESVIRUS SAIMIRI (STRAIN 11) 138-165 PROTEIN PVG46_HSVI1 PROBABLE MAJOR ICTALURID HERPESVIRUS 1 142-169 346-373 897-924 973-1007 GLYCOPROTEIN PVG48_HSVSA HYPOTHETICAL GENE 48 HERPESVIRUS SAIMIRI (STRAIN 11) 360-394 PROTEIN PVG4R_AMEPV G4R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS 4-31 PVG4_SPV1R GENE 4 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 116-146 PVG51_HSVI1 HYPOTH GENE 51 MEMBRANE ICTALURID HERPESVIRUS 1 34-61 87-114 PROTEIN PVG52_HSVSA HYPOTHETICAL GENE 52 HERPESVIRUS SAIMIRI (STRAIN 11) 47-74 PROTEIN PVG56_HSVI1 HYPOTHETICAL GENE 56 ICTALURID HERPESVIRUS 1 582-609 PROTEIN PVG5_SPV1R GENE 5 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 65-92 PVG5_SPV4 GENE 5 PROTEIN SPIROPLASMA VIRUS 4 56-83 PVG63_HSVI1 HYPOTHETICAL GENE 63 ICTALURID HERPESVIRUS 1 550-584 PROTEIN PVG64_HSVI1 HYPOTHETICAL GENE 64 ICTALURID HERPESVIRUS 1 447-504 PROTEIN PVG65_HSVI1 HYPOTHETICAL GENE 65 ICTALURID HERPESVIRUS 1 1213- PROTEIN 1254 PVG66_HSVI1 HYPOTHETICAL GENE 66 ICTALURID HERPESVIRUS 1 362-406 PROTEIN PVG67_HSVI1 HYPOTHETICAL GENE 67 ICTALURID HERPESVIRUS 1 1342- PROTEIN 1369 PVG68_HSVI1 HYPOTHETICAL GENE 68 ICTALURID HERPESVIRUS 1 261-288 PROTEIN PVG72_HSVI1 HYPOTHETICAL GENE 72 ICTALURID HERPESVIRUS 1 447-481 PROTEIN PVG75_HSVI1 HYPOTHETICAL GENE 75 ICTALURID HERPESVIRUS 1 388-422 PROTEIN PVG76_HSVI1 HYPOTHETICAL GENE 76 ICTALURID HERPESVIRUS 1 200-227 PROTEIN PVG7_SPV4 GENE 7 PROTEIN SPIROPLASMA VIRUS 4 14-44 PVGF1_IBVB F1 PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 1230- 2408- 1260 2435 PVGL2_CVBF E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN F15) 399-426 642-676 1022- 1278- 1084 1305 PVGL2_CVBL9 E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN L9) 399-426 1022- 1278- 1084 1305 PVGL2_CVBLY E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN LY-138) 399-426 642-676 1022- 1278- 1084 1305 PVGL2_CVBM E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS) 399-426 642-676 1022- 1278- 1084 1305 PVGL2_CVBQ E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN QUEBEC) 399-426 642-676 1022- 1278- 1084 1305 PVGL2_CVBV E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN VACCINE) 399-426 642-676 1022- 1278- 1084 1305 PVGL2_CVH22 E2 GLYCOPROTEIN PRECURSOR HUMAN CORONAVIRUS (STRAIN 229E) 770-797 809-875 1056- 1112 PVGL2_CVM4 E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN 643-684 1030- WILD TYPE 4) 1092 PVGL2_CVMA5 E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN A59) 36-63 591-632 978-1040 PVGL2_CVMJC E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN 643-684 1030- JHMV/VARIANT CL-2) 1092 PVGL2_CVMJH E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN JHM) 502-543 889-951 PVGL2_CVPFS E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-110 692-733 1072- 1353- CORONAVIRUS (STRAIN FS722 1145 1389 PVGL2_CVPM1 E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-110 692-733 1069- 1353- CORONAVIRUS (STRAIN MILLE 1145 1389 PVGL2_CVPPR E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 73-107 690-731 1067- 1351- CORONAVIRUS (STRAIN PUR46 1143 1387 PVGL2_CVPPU E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-107 690-731 1067- 1351- CORONAVIRUS (STRAIN PURD 1143 1387 PVGL2_CVPR8 E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS (STRAIN 468-509 845-921 1129- 86/137004/BRITISH ISOLAT 1165 PVGL2_CVPRM E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 468-509 845-921 1129- (STRAIN RM4) 1165 PVGL2_CVPRT E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-107 690-731 1067- 1353- CORONAVIRUS (STRAIN NEB72 1143 1387 PVGL2_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN B95-8) 68-102 GLYCOPROTEIN PVGL2_FIPV E2 GLYCOPROTEIN PRECURSOR FELINE INFECTIOUS PERITONITIS VIRUS 189-233 454-481 709-736 1072- 1356- (STRAIN 79-1146) 1148 1392 PVGL2_IBV6 E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 809-836 876-903 1057- (STRAIN 6/82) 1091 PVGL2_IBVB E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 808-835 875-902 1056- (STRAIN BEAUDETTE) 1090 PVGL2_IBVD2 E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 809-836 876-903 1057- (STRAIN D274) 1091 PVGL2_IBVK E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 808-835 875-902 1056- (STRAIN KB8523) 1090 PVGL2_IBVM E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 808-835 875-902 1056- (STRAIN M41) 1090 PVGLB_EBV GLYCOPROTEIN GP110 EPSTEIN-BARR VIRUS (STRAIN B95-8) 95-122 631-658 PRECURSOR PVGLB_HCMVA GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 25-88 397-424 440-467 851-878 PVGLB_HCMVT GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 50-88 397-424 435-462 852-879 PVGLB_HSVB1 GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUS TYPE 1 427-454 PVGLB_HSVB2 GLYCOPROTEIN B-1 BOVINE HERPESVIRUS TYPE 2 (STRAIN BMV) 447-474 PRECURSOR PVGLB_HSVE1 GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (ISOLATE HVS25A) 443-470 934-961 PVGLB_HSVE4 GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 4 486-513 616-643 PVGLB_HSVEA GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB1) 443-470 934-961 PVGLB_HSVEB GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 443-470 934-961 PVGLB_HSVEL GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 443-470 933-960 (STRAIN KENTUCKY D) PVGLB_HSVMD GLYCOPROTEIN B PRECURSOR MAREK'S DISEASE HERPESVIRUS (STRAIN RB-1B) 93-120 352-379 PVGLB_MCMVS GLYCOPROTEIN B PRECURSOR MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 381-408 441-475 PVGLC_HSV11 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 469-510 PVGLC_HSV1K GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 469-510 PVGLC_HSVEB GLYCOPROTEIN C PRECURSOR EQUINE HERPESVIRUS TYPE 1 124-151 PVGLC_VZVD GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 295-322 PVGLC_VZVS GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN SCOTT) 295-322 PVGLE_HSV2 GLYCOPROTEIN E PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2) 111-148 PVGLF_BRSVA FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 216-243 442-469 486-531 PRECURSOR (STRAIN A51908) PVGLF_BRSVC FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 216-243 444-471 488-533 PRECURSOR (STRAIN COPENHAGEN) PVGLF_BRSVR FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 216-243 444-471 488-533 PRECURSOR (STRAIN RB94) PVGLF_CDVO FUSION GLYCOPROTEIN CANINE DISTEMPER VIRUS (STRAIN 252-293 340-367 PRECURSOR ONDERSTEPOORT) PVGLF_HRSV1 FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65 154-203 442-471 488-515 PRECURSOR (SUBGROUP B/STRAIN 18537) PVGLF_HRSVA FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 213-243 488-518 PRECURSOR (STRAIN A2) PVGLF_HRSVL FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 216-243 444-471 488-515 PRECURSOR (SUBGROUP A/STRAIN LONG) PVGLF_HRSVR FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 213-243 442-471 488-518 PRECURSOR (STRAIN RSS-2) PVGLF_MEASE FUSION GLYCOPROTEIN MEASLES VIRUS (STRAINS EDMONSTON 228-262 PRECURSOR AND HALLE) PVGLF_MEASI FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN IP-3-CA) 231-265 PRECURSOR PVGLF_MEASY FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN YAMAGATA-1) 228-262 PRECURSOR PVGLF_MUMP1 FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN SBL-1) 20-54 447-486 PRECURSOR PVGLF_MUMPM FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 20-54 447-486 PRECURSOR PVGLF_MUMPR FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN RW) 20-54 447-486 PRECURSOR PVGLF_MUMPS FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN SBL) 151-178 426-511 PRECURSOR PVGLF_NDVA FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSOR AUSTRALIA-VICTORIA/32) PVGLF_NDVB FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSOR BEAUDETTE C/45) PVGLF_NDVH3 FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN HER/33) 151-178 426-512 PRECURSOR PVGLF_NDVH4 FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSOR B1-HITCHNER/47) PVGLF_NDVI FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN ITALIEN/45) 151-178 426-512 PRECURSOR PVGLF_NDVL FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN LAS/46) 151-178 192-219 426-512 PRECURSOR PVGLF_NDVM FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 437-512 PRECURSOR MIYADERA/51) PVGLF_NDVQ FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 433-512 PRECURSOR QUEENSLAND/66) PVGLF_NDVT FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN TEXAS) 151-178 426-512 PRECURSOR PVGLF_NDVTG FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSOR TEXAS G.B./48) PVGLF_NDVU FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN ULSTER/67) 151-178 426-512 PRECURSOR PVGLF_PHODV FUSION GLYCOPROTEIN PHOCINE DISTEMPER VIRUS 36-63 221-262 309-336 PRECURSOR PVGLF_PI1HC FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 147-174 210-266 PRECURSOR PVGLF_PI2H FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 90-117 141-175 238-266 483-528 PRECURSOR PVGLF_PI2HG FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 90-117 141-175 238-266 483-528 PRECURSOR (STRAIN GREER) PVGLF_PI2HT FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 90-117 141-175 238-266 483-528 PRECURSOR (STRAIN TOSHIBA) PVGLF_PI3B FUSION GLYCOPROTEIN BOVINE PARAINFLUENZA 3 VIRUS 115-182 207-241 459-497 PRECURSOR PVGLF_PI3H4 FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 3 VIRUS 115-182 207-241 459-497 PRECURSOR (STRAIN N1H 47885) PVGLF_RINDK FUSION GLYCOPROTEIN RINDERPEST VIRUS (STRAIN KABETE O) 224-265 458-485 PRECURSOR PVGLF_RINDL FUSION GLYCOPROTEIN RINDERPEST VIRUS (STRAIN L) 224-265 458-506 PRECURSOR PVGLF_SEND5 FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 122-149 211-245 480-507 PRECURSOR PVGLF_SENDF FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN FUSHIMI) 122-149 211-245 480-507 PRECURSOR PVGLF_SENDH FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN HARRIS) 122-149 211-245 480-507 PRECURSOR PVGLF_SENDJ FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN HVJ) 122-149 211-245 480-507 PRECURSOR PVGLF_SENDZ FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z) 122-149 211-245 480-507 PRECURSOR PVGLF_SV41 FUSION GLYCOPROTEIN SIMIAN VIRUS 41 144-185 241-269 459-496 PRECURSOR PVGLF_SV5 FUSION GLYCOPROTEIN SIMIAN VIRUS 5 (STRAIN W3) 137-171 417-444 PRECURSOR PVGLF_TRTV FUSION GLYCOPROTEIN TURKEY RHINOTRACHEITIS VIRUS 124-161 193-200 457-484 PRECURSOR PVGLG_BEFV SPIKE GLYCOPROTEIN BOVINE EPHEMERAL FEVER VIRUS 523-557 PRECURSOR PVGLG_BRSVC MAJOR SURFACE BOVINE RESPIRATORY SYNCYTIAL VIRUS 92-123 GLYCOPROTEIN G (STRAIN COPENHAGEN) PVGLG_HRSV1 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL VIRUS 63-93 GLYCOPROTEIN G (SUBGROUP B/STRAIN 18537) PVGLG_HRSV4 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL VIRUS 66-107 GLYCOPROTEIN G (STRAIN RSB5857) PVGLG_HRSV5 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL VIRUS 243-273 GLYCOPROTEIN G (STRAIN RSB6190) PVGLG_HRSV8 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL VIRUS 66-93 GLYCOPROTEIN G (SUBGROUP B/STRAIN 8/60) PVGLG_HSVE4 GLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUS TYPE 4 271-298 PVGLG_HSVEB GLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 383-410 PVGLG_RABVT SPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN STREET) 489-519 PRECURSOR PVGLG_VSVIG SPIKE GLYCOPROTEIN VESICULAR STOMATITIS VIRUS (SEROTYPE 472-499 PRECURSOR INDIANA/STRAIN GLASGOW) PVGLH_EBV GLYCOPROTEIN GP85 EPSTEIN-BARR VIRUS (STRAIN B95-8) 549-576 619-648 PRECURSOR PVGLH_HCMVA GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 107-136 270-297 PVGLH_HCMVT GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 106-135 PVGLH_HSV6G GLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 62-89 360-403 PVGLH_HSVSA GLYCOPROTEIN H PRECURSOR HERPESVIRUS SAIMIRI (STRAIN 11) 388-415 PVGLI_HCMVA IE GLYCOPROTEIN PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 47-111 PVGLM_BUNGE M POLYPROTEIN PRECURSOR BUNYAVIRUS GERMISTON 512-546 914-941 1128- 1255 PVGLM_BUNL7 M POLYPROTEIN PRECURSOR BUNYAVIRUS LA CROSSE (ISOLATE L74) 913-950 PVGLM_BUNYW M POLYPROTEIN PRECURSOR BUNYAMWERA VIRUS 340-374 504-535 682-709 PVGLM_DUGBV M POLYPROTEIN PRECURSOR DUGBE VIRUS 945-972 PVGLM_HANTB M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN B-1) 73-100 693-720 PVGLM_HANTH M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN HOJO) 75-102 PVGLM_HANTL M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN LEE) 75-102 PVGLM_HANTV M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN 76-118) 75-102 PVGLM_INSV M POLYPROTEIN PRECURSOR IMPATIENS NECROTIC SPOT VIRUS 628-655 1069- 1101 PVGLM_PHV M POLYPROTEIN PRECURSOR PROSPECT HILL VIRUS 69-96 PVGLM_PUUMH M POLYPROTEIN PRECURSOR PUUMALA VIRUS (STRAIN HALLNAS B1) 72-110 PVGLM_PUUMS M POLYPROTEIN PRECURSOR PUUMALA VIRUS (STRAIN SOTKAMO) 72-110 PVGLM_SEOU8 M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN 80-39) 513-540 693-720 PVGLM_SEOUR M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN R22) 73-100 513-540 694-721 PVGLM_SEOUS M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN SR-11) 73-100 513-540 694-721 PVGLN_BEFV NONSTRUCT GLYCOPRO GNS BOVINE EPHEMERAL FEVER VIRUS 523-564 PRECURSOR PVGLP_BEV PEPLOMER GLYCOPROTEIN BERNE VIRUS 48-82 1145- 1184- 1505- PRECURSOR 1179 1211 1532 PVGLY_JUNIN GLYCOPROTEIN POLYPROTEIN JUNIN ARENAVIRUS 14-41 PRECURSO PVGLY_LASSG GLYCOPROTEIN POLYPROTEIN LASSA VIRUS (STRAIN GA391) 86-113 PRECURSO PVGLY_MOPEI GLYCOPROTEIN POLYPROTEIN MOPEIA VIRUS 86-113 316-346 PRECURSO PVGLY_PIARV GLYCOPROTEIN POLYPROTEIN PICHINDE ARENAVIRUS 334-375 PRECURSO PVGLY_TACV GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS 109-136 315-350 PRECURSO PVGLY_TACV5 GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS (STRAIN V5) 303-338 PRECURSO PVGLY_TACV7 GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS (STRAIN V7) 302-337 PRECURSO PVGLY_TACVT GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS (STRAIN TRVL 11598) 303-338 PRECURSO PVGNM_CPSMV GENOME POLYPROTEIN M COWPEA SEVERE MOSAIC VIRUS (STRAIN DG) 192-221 PVGP8_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN B95-8) 104-149 ANTIGEN GP85 PVGP_EBOV STRUCTURAL GLYCOPROTEIN EBOLA VIRUS 280-314 PRECURSO PVGP_MABVM STRUCTURAL GLYCOPROTEIN MARBURG VIRUS (STRAIN MUSOKE) 559-589 619-646 PRECURSO PVGP_MABVP STRUCTURAL GLYCOPROTEIN MARBURG VIRUS (STRAIN POPP) 559-589 619-646 PRECURSO PVH05_VACCC PROTEIN H5 VACCINIA VIRUS (STRAIN COPENHAGEN) 132-166 PVH05_VACCV PROTEIN H5 VACCINIA VIRUS (STRAIN WR) 132-166 PVH05_VARV PROTEIN H5 VARIOLA VIRUS 64-91 150-184 PVHEL_LSV PROBABLE HELICASE LILY SYMPTOMLESS VIRUS 130-160 PVHRP_VACCC HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 241-275 PVHRP_VACCV HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN WR) 241-275 PV101_VACCC PROTEIN I1 VACCINIA VIRUS (STRAIN COPENHAGEN) 90-117 153-180 VI01_VARV PROTEIN I1 VARIOLA VIRUS 90-117 153-180 VI03_VACCC PROTEIN I3 VACCINIA VIRUS (STRAIN COPENHAGEN) 160-190 VI03_VACCV PROTEIN I3 VACCINIA VIRUS (STRAIN WR) 160-190 VI03_VARV PROTEIN I3 VARIOLA VIRUS 160-190 VI08_VACCC PUTATIVE RNA HELICASE 18 VACCINIA VIRUS (STRAIN COPENHAGEN) 290-317 548-575 593-632 VI08_VACCV PUTATIVE RNA HELICASE 18 VACCINIA VIRUS (STRAIN WR) 290-317 548-575 593-632 VI08_VARV PUTATIVE RNA HELICASE 18 VARIOLA VIRUS 290-317 548-575 593-632 VIE1_MCMVS IMMEDIATE-EARLY PROTEIN 1 MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 261-288 VIE2_NPVOP IMMEDIATE-EARLY ORGYIA PSEUDOTSUGATA MULTICAPSID 355-385 PROTEIN IE-2 POLYHEDROSIS VIRUS VIEN_NPVAC IE-REG PROTEIN IE-N AUTOGRAPHA CALIFORNICA NUCLEAR 217-325 343-400 POLYHEDROSIS VIRUS VIF_HV1RH VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 62-89 (RF/HAT ISOLATE) VIF_SIVAI VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 2-36 (ISOLATE AGM/CLONE GRI-1) VIMP_HSVEB PROB INTEGRAL MEMBRANE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 147-174 PROTEIN VIMP_HSVSA INTEGRAL MEMBRANE HERPESVIRUS SAIMIRI (STRAIN 11) 80-107 PROTEIN VINT_SSV1 PROBABLE INTEGRASE SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 73-100 VJ01_VACCC PROTEIN J1 VACCINIA VIRUS (STRAIN COPENHAGEN) 22-56 VJ01_VACCV PROTEIN J1 VACCINIA VIRUS (STRAIN WR) 22-56 VJ01_VARV PROTEIN J1 VARIOLA VIRUS 22-56 VL1_CRPVK PROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) PAPILLOMAVIRUS 331-383 (STRAIN KANSAS) VL1_FPVL PROBABLE L1 PROTEIN AVIAN PAPILLOMAVIRUS FPV-L 38-65 VL1_HPV08 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 354-392 VL1_HPV18 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 183-210 VL1_HPV33 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 19-46 VL1_HPV41 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 345-372 VL1_HPV51 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 19-46 VL1_HPV58 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 45-72 VL2_HPV1A PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 407-445 VL2_HPV41 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 415-442 VL3_REOVD MINOR CORE PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 330-357 LAMBDA 3 VL3_REOVL MINOR CORE PROTEIN REOVIRUS (TYPE 1/STRAIN LANG) 330-357 LAMBDA 3 VL96_IRV1 L96 PROTEIN TIPULA IRIDESCENT VIRUS 146-180 625-652 PVM1_REOVL MINOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 290-317 PROTEIN MU PVM21_REOVD MAJOR VIRION STRUC PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 625-662 MU-1/MU- PVM22_REOVD MAJOR VIRION STRUC PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 624-661 MU-1/MU- PVM2_REOVJ MAJOR VIRION STRUC PROTEIN REOVIRUS (TYPE 2/STRAIN D5/JONES) 624-661 MU-1/MU- PVM3_REOVD MAJOR NONSTRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING) 159-186 343-370 456-483 631-690 PROTEIN MU-N PVMA2_BRSVA MATRIX GLYCOPROTEIN M2 BOVINE RESPIRATORY SYNCYTIAL VIRUS 124-152 (STRAIN A51908) PVMA2_HRSVA MATRIX GLYCOPROTEIN M2 HUMAN RESPIRATORY SYNCYTIAL VIRUS 124-151 (STRAIN A2) PVMAT_BRSVA MATRIX PROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 219-246 (STRAIN A51908) PVMAT_HRSVA MATRIX PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 219-246 (STRAIN A2) PVMAT_INCJJ MATRIX (M) PROTEIN INFLUENZA C VIRUS (STRAIN C/JJ/50) 151-185 PVMAT_NDVA MATRIX PROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 247-274 AUSTRALIA-VICTORIA/32) PVMAT_PI2HT MATRIX PROTEIN HUMAN PARAINFLUENZA 2 VIRUS 96-123 (STRAIN TOSHIBA) PVMAT_P13B MATRIX PROTEIN BOVINE PARAINFLUENZA 3 VIRUS 201-231 PVMAT_PI3H4 MATRIX PROTEIN HUMAN PARAINFLUENZA 3 VIRUS 201-231 (STRAIN NIH 47885) PVMAT_SV41 MATRIX PROTEIN SIMIAN VIRUS 41 323-353 PVME1_CVBM E1 GLYCOPROTEIN BOVINE CORONAVIRUS (STRAIN MEBUS) 175-209 PVME1_CVTKE E1 GLYCOPROTEIN TURKEY ENTERIC CORONAVIRUS 175-209 PVME1_IBV6 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-48 184-218 (STRAIN 6/82) PVME1_IBVB E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-48 184-218 (STRAIN BEAUDETTE) PVME1_IBVB2 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-48 184-218 (STRAIN BEAUDETTE M42) PVME1_IBVK E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 184-218 (STRAIN KB8523) PVMP_CAMVC MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841) 220-254 273-324 PVMP_CAMVD MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 29-56 220-254 273-324 PVMP_CAMVE MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC) 227-254 273-324 PVMP_CAMVN MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153) 220-254 273-324 PVMP_CAMVS MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 220-254 273-324 (STRAIN STRASBOURG) PVMP_CAMVW MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN W260) 220-254 273-324 PVMP_CERV MOVEMENT PROTEIN CARNATION ETCHED RING VIRUS 26-53 100-127 PVMP_SOCMV MOVEMENT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 4-31 78-118 PVMSA_HPBHE MAJOR SURFACE ANTIGEN HERON HEPATITIS B VIRUS 294-328 PRECURSOR PVMT1_DHVI1 MATRIX PROTEIN 1 DHORI VIRUS (STRAIN INDIAN/1313/61) 38-65 237-264 PVMT8_MYXVL M-T8 PROTEIN MYXOMA VIRUS (STRAIN LAUSANNE) 163-190 PVMT9_MYXVL MT-9 PROTEIN MYXOMA VIRUS (STRAIN LAUSANNE) 465-492 PVN34_ROTPC NONSTRUCTURAL PROTEIN PROCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 83-113 NS34 PVNCN_PAVBO PROBABLE NONCAPSID BOVINE PARVOVIRUS 149-176 PROTEIN NP1 PVNCS_ADVG NONCAPSID PROTEIN NS-1 ALEUTIAN MINK DISEASE PARVOVIRUS (STRAIN G) 86-148 PVNCS_AEDEV NONCAPSID PROTEIN NS-1 AEDES DENSONUCLEOSIS VIRUS 14-41 279-339 487-517 585-612 780-817 821-848 (STRAIN GK V 002 002) PVNCS_MUMIM NONCAPSID PROTEIN NS-1 MURINE MINUTE VIRUS (STRAIN MVMI) 35-62 262-289 PVNCS_MUMIV NONCAPSID PROTEIN NS-1 MURINE MINUTE VIRUS 35-62 262-289 PVNCS_PAVHB NONCAPSID PROTEIN NS-1 HUMAN PARVOVIRUS B19 236-270 PVNCS_PAVHH NONCAPSID PROTEIN NS-1 HAMSTER PARVOVIRUS H1 35-62 PVNCS_PAVPN NONCAPSID PROTEIN NS-1 PORCINE PARVOVIRUS (STRAIN NADL-2) 24-55 169-196 316-346 PVNS1_EHDV2 NONSTRUCTURAL PROTEIN NS1 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 411-438 (SEROTYPE 2/STRAIN ALBERTA) PVNS1_IAALA NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ALASKA/6/77) 171-198 PVNS1_IAANN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ANN ARBOR/6/60) 171-198 PVNS1_IACHI NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/CHILE/1/83) 171-198 PVNS1_IACKG NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/CHICKEN/GERMANY/N/49) PVNS1_IACKJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 168-195 A/CHICKEN/JAPAN/24) PVNS1_IADA2 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/DUCK/ALBERTA/60/76) PVNS1_IAFOM NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/FORT MONMOUTH/1/47) PVNS1_IAFOW NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/FORT WARREN/1/50) PVNS1_IALE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/LENINGRAD/134/57) PVNS1_IAMA6 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/MALLARD/ALBERTA/88/76) PVNS1_IAPI1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/PINTAIL/ALBERTA/121/79) PVNS1_IAPI3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/PINTAIL/ALBERTA/358/79) PVNS1_IATKB NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/TURKEY/BETHLEHEM-GLILIT/1492-B/82) PVNS1_IATKC NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/TURKEY/CANADA/63) PVNS1_IATRT NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/TERN/TURKMENIA/18/72) PVNS1_IAUDO NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/UDORN/307/72) 171-198 PVNS1_IAUSS NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/USSR/90/77) 171-198 PVNS1_INBPA NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN B/PA/79) 171-198 PVNS2_IATKR NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS (STRAIN 87-114 A/TURKEY/OREGON/71) PVNS2_INBLE NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS (STRAIN B/LEE/40) 51-78 PVNS2_INBYA NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS (STRAIN B/YAMAGATA/1/73) 51-78 PVNS2_INCJJ NONSTRUCTURAL PROTEIN NS2 INFLUENZA C VIRUS (STRAIN C/JJ/50) 71-98 PVNS3_CVPFS NONSTRUCTURAL PROTEIN 3-1 PORCINE TRANSMISSIBLE GASTROENTERITIS 9-36 CORONAVIRUS (STRAIN FS772 PVNS4_CVH22 NONSTRUCTURAL PROTEIN 4 HUMAN CORONAVIRUS (STRAIN 229E) 9-36 PVNS4_RSV NONSTRUCTURAL PROTEIN NS4 RICE STRIPE VIRUS 6-40 PVNS7_CVCAE NONSTRUCTURAL PROTEIN 7 CANINE ENTERIC CORONAVIRUS (STRAIN K378) 11-45 PVNS7_CVFE3 NONSTRUCTURAL PROTEIN 7 FELINE ENTERIC CORONAVIRUS 8-42 (STRAIN 79-1683) PVNS7_CVPFS NONSTRUCTURAL PROTEIN 7 PORCINE TRANSMISSIBLE GASTROENTERITIS 34-61 CORONAVIRUS (STRAIN FS772 PVNS7_CVPPU NONSTRUCTURAL PROTEIN 7 PORCINE TRANSMISSIBLE GASTROENTERITIS 34-61 CORONAVIRUS (STRAIN PURD PVNS7_CVPRM NONSTRUCTURAL PROTEIN 7 PORCINE RESPIRATORY CORONAVIRUS 34-61 PVNS7_FIPV NONSTRUCTURAL PROTEIN 7 FELINE INFECTIOUS PERITONITS VIRUS 8-42 (STRAIN 79-1146) PVNSC_PI1HE NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 41-75 (STRAIN CI-14/83) PVNSC_PI3H4 NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 3 VIRUS 58-99 (STRAIN NIH 47885) PVNSM_INSV NONSTRUCTURAL PROTEIN IMPATIENS NECROTIC SPOT VIRUS 262-296 NS-M PVNST_BUNLC NONSTRUCTURAL PROTEIN BUNYAVIRUS LA CROSSE 57-84 NS-S PVNST_TOSV NONSTRUCTURAL PROTEIN TOSCANA VIRUS 146-180 NS-S PVNUC_EBOV NUCLEOPROTEIN EBOLA VIRUS 331-369 PVNUC_IAANA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/ANAS ACUTA/PRIMORJE/695/76) PVNUC_IAANN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/ANN ARBOR/6/60) PVNUC_IABRA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/BRAZIL/11/78) 378-405 PVNUC_IABUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/BUDGERIGAR/HOKKAIDO/1/77) PVNUC_IACAL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/CALIFORNIA/10/78) PVNUC_IACKG NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/CHICKEN/GERMANY/N/49) PVNUC_IACKP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/CHICKEN/PENNSYLVANIA/1/83) PVNUC_IADAU NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/AUSTRALIA/749/80) PVNUC_IADBE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/BEIJING/1/78) PVNUC_IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/CZECHOSLOVAKIA/56) PVNUC_IADE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/ENGLAND/1/) PVNUC_IADE2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/ENGLAND/1/62) PVNUC_IADHK NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/HONG KONG/7/75) PVNUC_IADM2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/MEMPHIS/928/74) PVNUC_IADMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/MANITOBA/1/53) PVNUC_IADNZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/NEW ZEALAND/31/76) PVNUC_IADU2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/UKRAINE/2/60) PVNUC_IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/ENGLAND/19/55) PVNUC_IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/FORT MONMOUTH/1/47) PVNUC_IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/FORT WARREN/1/50) PVNUC_IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/FOWL PLAGUE VIRUS/DOBSON/‘DUTCH’/27) PVNUC_IAFPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/FOWL PLAGUE VIRUS/ROSTOCK/34) PVNUC_IAGRE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GREY TEAL/AUSTRALIA/2/79) PVNUC_IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MARYLAND/5/77) PVNUC_IAGU2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MARYLAND/704/77) PVNUC_IAGU3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MARYLAND/1824/78) PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MARYLAND/1815/79) PVNUC_IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/ASTRAKHAN/227/84) PVNUC_IAGUM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MASSACHUSETTS/26/80) PVNUC_IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MINNESOTA/945/80) PVNUC_IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/HICKOX/40) 378-405 PVNUC_IAHJI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/JILLIN/1/89) PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/LONDON/1416/73) PVNUC_IAHMI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/MIAMI/1/63) PVNUC_IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/68) 378-405 PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/HONG KONG/5/83) 378-405 PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/PRAGUE/1/56) PVNUC_IAHTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/TENNESSEE/5/86) PVNUC_IAKIE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/KIEV/59/79) 378-405 PVNUC_IALEN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/LENINGRAD/54/1) 378-405 PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/MALLARD/ASTRAKHAN/244/82) PVNUC_IAMAN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/MALLARD/NEW YORK/6750/78) PVNUC_IAMIN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/MINK/SWEDEN/84) PVNUC_IANEJ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/NEW JERSEY/8/76) PVNUC_IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/NT/60/68) 378-405 PVNUC_IAOHI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/OHIO/4/83) 378-405 PVNUC_IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/PARROT/ULSTER/73) PVNUC_IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/PUERTO RICO/8/34) PVNUC_IARUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/RUDDY TURNSTONE/NEW JERSEY/47/85) PVNUC_IASE0 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SEAL/MASSACHUSETTS/1/80) PVNUC_IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SHEARWATER/AUSTRALIA/72) PVNUC_IAS1N NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SINGAPORE/1/57) PVNUC_IATE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TEAL/ICELAND/29/80) PVNUC_IATKN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TURKEY/MINNESOTA/1661/81) PVNUC_IATKO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TURKEY/ONTARIO/7732/66) PVNUC_IATRS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TERN/SOUTH AFRICA/61) PVNUC_IATRT NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TERN/TURKMENIA/18/72) PVNUC_IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/TEXAS/1/77) 378-405 PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/UDORN/307/72) 378-405 PVNUC_IAUSS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/USSR/90/77) 378-405 PVNUC_IAVI6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/VICTORIA/5/68) 378-405 PVNUC_IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/WHALE/MAINE/328/84) PVNUC_IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/WHALE/PACIFIC OCEAN/19/76) PVNUC_IAWIL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/WILSON-SMITH/33) PVNUC_IAWIS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/WISCONSIN/3523/88) PVNUC_IAZ29 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/SWINE/29/37) 378-405 PVNUC_IAZ41 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/SWINE/41/49) 378-405 PVNUC_IAZCA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/CAMBRIDGE/1/35) PVNUC_IAZDA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/DANDONG/9/83) PVNUC_IAZGE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/GERMANY/2/81) PVNUC_IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/HONG KONG/6/76) PVNUC_IAZH3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/HONG KONG/126/82) PVNUC_IAZH4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/HONG KONG/127/82) PVNUC_IAZI1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/IOWA/15/30) PVNUC_IAZI2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/IOWA/1976/31) PVNUC_IAZI3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/SWINE/IOWA/46) 378-405 PVNUC_IAZJ1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ITALY/437/76) PVNUC_IAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ITALY/2/79) PVNUC_IAZJ3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ITALY/141/81) PVNUC_IAZJ4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ITALY/839/89) PVNUC_IAZJA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/JAMESBURG/42) PVNUC_IAZMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/SWINE/MAY/54) 378-405 PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/NETHERLANDS/12/85) PVNUC_IAZOH NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/OHIO/23/35) PVNUC_IAZON NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ONTARIO/2/81) PVNUC_IAZTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/TENNESSEE/24/77) PVNUC_IAZW1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/WISCONSIN/1/57) PVNUC_IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/WISCONSIN/1/61) PVNUC_INCCA NUCLEOPROTEIN INFLUENZA C VIRUS (STRAIN 99-126 416-443 451-478 C/CALIFORNIA/78) PVNUC_MABVM NUCLEOPROTEIN MARBURG VIRUS (STRAIN MUSOKE) 366-407 PVNUC_MABVP NUCLEOPROTEIN MARBURG VIRUS (STRAIN POPP) 366-407 PVO01_VACCC PROTEIN O1 VACCINIA VIRUS (STRAIN COPENHAGEN) 7-37 109-138 581-608 PVO01_VARV PROTEIN O1 VARIOLA VIRUS 7-37 109-138 581-608 PVOR1_FXMV 152 KD PROTEIN FOXTAIL MOSAIC VIRUS 1023- 1050 PVOR1_NMV 186 KD PROTEIN NARCISSUS MOSAIC VIRUS 996-1023 1527- 1561 PVOR1_PMV 176 KD PROTEIN PAPAYA MOSAIC POTEXVIRUS 948-978 1481- 1532 PVOR1_PVMR 223 KD PROTEIN POTATO VIRUS M (STRAIN RUSSIAN) 597-627 PVOR1_PVX 165 KD PROTEIN POTATO VIRUS X 698-725 1017- 1044 PVOR1_PVXX3 165 KD PROTEIN POTATO VIRUS X (STRAIN X3) 698-725 1017- 1044 PVOR1_SMYEA 150 KD PROTEIN STRAWBERRY MILD YELLOW EDGE-ASSOCIATED 312-342 691-721 VIRUS PVP10_NPVAC P10 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 7-41 POLYHEDROSIS VIRUS PVP10_NPVOP P10 PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 7-48 POLYHEDROSIS VIRUS PVP10_NPVSE P10 PROTEIN SPODOPTERA EXIGUA NUCLEAR POLYHEDROSIS 6-33 37-64 VIRUS (STRAIN US) PVP10_RGDV NONSTRUCTURAL PROTEIN RICE GALL DWARF VIRUS 205-242 PNS10 PVP10_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 151-181 227-254 PNS10 PVP11_RDV NONSTRUCTURAL PROTEIN RICE DWARF VIRUS 53-80 PNS11 PVP12_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 81-108 PNS12 PVP18_WTVNJ NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS (STRAIN NJ) 81-108 PNS12 PVP19_AMCV CORE PROTEIN P19 ARTICHOKE MOTTLED CRINKLE VIRUS 73-100 PVP19_TBSVC CORE PROTEIN P19 TOMATO BUSHY STUNT VIRUS (STRAIN CHERRY) 73-100 PVP23_HSVSA PROBABLE CAPSID PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 2-29 VP23 PVP26_HSVEB CAPSID PROTEIN VP26 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 36-63 PVP26_HSVSA CAPSID PROTEIN VP26 HERPESVIRUS SAIMIRI (STRAIN 11) 48-75 PVP2_AHSV4 OUTER CAPSID PROTEIN VP2 AFRICAN HORSE SICKNESS VIRUS 277-304 410-437 632-662 907-934 (SEROTYPE 4/STRAIN VACCINE) PVP2_BTV13 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 13/ISOLATE USA) 815-846 PVP2_BTV1A OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 898-925 1/ISOLATE AUSTRALIA) PVP2_BTV1S OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 119-146 1/ISOLATE SOUTH AFRICA) PVP2_EHDV1 OUTER CAPSID PROTEIN VP2 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 72-103 415-453 (SEROTYPE 1) PVP2_ROTBR RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN RF) 39-94 523-553 PVP2_ROTBU RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN UK) 39-94 524-554 PVP2_ROTHW RNA-BINDING PROTEIN VP2 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 70-101 533-567 PVP2_ROTPC RNA-BINDING PROTEIN VP2 PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 52-99 128-156 518-545 705-746 PVP2_ROTS1 RNA-BINDING PROTEIN VP2 SIMIAN 11 ROTOVIRUS (STRAIN SA11) 36-96 PVP30_ASFE7 PHOSPHOPROTEIN P30 AFRICAN SWINE FEVER VIRUS (STRAIN E-75) 39-75 PVP32_ASFB7 PHOSPHOPROTEIN P32 AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 39-75 PVP35_EBOV POLYMERASE COMPLEX EBOLA VIRUS 83-119 PROTEIN VP35 PVP35_MABVM POLYMERASE COMPLEX MARBURG VIRUS (STRAIN MUSOKE) 80-107 231-258 PROTEIN VP35 PVP35_MABVP POLYMERASE COMPLEX MARBURG VIRUS (STRAIN POPP) 80-107 231-258 PROTEIN VP35 PVP35_NPVAC EARLY 35 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 270-297 POLYHEDROSIS VIRUS PVP35_NPVBM EARLY 35 KD PROTEIN BOMBYX MORI NUCLEAR POLYHEDROSIS VIRUS 68-102 PVP35_VACCV IMMUNODOM ENV PRO P35 VACCINIA VIRUS (STRAIN WR) 178-205 PVP39_NPVAC MAJOR CAPSID PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 134-161 264-291 POLYHEDROSIS VIRUS PVP39_NPVOP MAJOR CAPSID PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 263-290 POLYHEDROSIS VIRUS PVP3_AHSV4 VP3 CORE PROTEIN AFRICAN HORSE SICKNESS VIRUS 132-159 (SEROTYPE 4/STRAIN VACCINE) PVP3_BTV10 VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 214-252 PVP3_BTV17 VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 17/ISOLATE USA) 214-252 PVP3_BTV1A VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 214-252 AUSTRALIA) PVP3_EHDV1 VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 209-243 798-832 (SEROTYPE 1) PVP3_EHDVA VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 798-832 (SEROTYPE 2/STRAIN AUSTRAL PVP3_GFLV P3 PROTEIN GRAPEVINE FANLEAF VIRUS 99-133 PVP3_ROTPC INNER CORE PROTEIN VP3 PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 39-66 329-384 PVP3_ROTS1 INNER CORE PROTEIN VP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 26-67 350-377 451-497 619-692 PVP40_EBV CAPSID PROTEIN P40 EPSTEIN-BARR VIRUS (STRAIN B95-8) 440-470 PVP40_HSVSA CAPSID PROTEIN P40 HERPESVIRUS SAIMIRI (STRAIN 11) 205-232 344-372 PVP40_ILTVI CAPSID PROTEIN P40 INFECTIOUS LARYNGOTRACHEITIS VIRUS 515-549 (STRAIN THORNE V882) PVP40_VZVD CAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 174-208 495-522 PVP41_ROTS1 OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 8-35 589-619 PVP42_ROTS1 OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 8-35 584-622 PVP4A_VACCC MAJOR CORE PROTEIN P4A VACCINIA VIRUS (STRAIN COPENHAGEN) 48-75 PRECURSOR PVP4A_VACCV MAJOR CORE PROTEIN P4A VACCINIA VIRUS (STRAIN WR) 48-75 PRECURSOR PVP4A_VARV MAJOR CORE PROTEIN P4A VARIOLA VIRUS 48-75 PRECURSOR PVP4B_FOWPV MAJOR CORE PROTEIN P4B FOWLPOX VIRUS 80-110 PRECURSOR PVP4B_VACCC MAJOR CORE PROTEIN P4B VACCINIA VIRUS (STRAIN COPENHAGEN) 7-37 PRECURSOR PVP4B_VACCV MAJOR CORE PROTEIN P4B VACCINIA VIRUS (STRAIN WR) 7-37 PRECURSOR PVP4B_VARV MAJOR CORE PROTEIN P4B VARIOLA VIRUS 7-37 PRECURSOR PVP4_BTV10 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 34-61 576-603 PVP4_BTV11 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 13/ISOLATE USA) 34-61 576-603 PVP4_BTV13 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 2/ISOLATE USA) 34-61 576-603 PVP4_BTV2A OUTER CAPSID PROTEIN VP4 NEBRASKA CALF DIARRHEA VIRUS 552-622 (STRAIN NCDV-LINCOLN) PVP4_NCDV OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS (SEROTYPE 6/STRAIN B641) 595-629 PVP4_ROTB4 OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS (STRAIN C486) 8-35 584-622 PVP4_ROTBC OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS (STRAIN UK) 595-629 PVP4_ROTBU OUTER CAPSID PROTEIN VP4 EQUINE ROTAVIRUS (STRAIN H-2) 112-146 235-269 552-629 PVP4_ROTEH OUTER CAPSID PROTEIN VP4 ROTAVIRUS (GROUP B/STRAIN IDIR) 5-32 PVP4_ROTG1 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN 1076) 8-35 572-628 PVP4_ROTH1 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN RV-5) 8-35 279-306 565-621 PVP4_ROTH5 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN 69M) 8-35 112-139 584-629 PVP4_ROTH6 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN 69M) 8-35 279-306 565-621 PVP4_ROTHD OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN DS1) 8-35 279-306 565-621 PVP4_ROTHJ OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (STRAIN K8) 8-35 111-138 PVP4_ROTHK OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (STRAIN KU) 8-35 77-104 279-306 577-621 PVP4_ROTHL OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (STRAIN L26) 8-35 279-306 565-621 PVP4_ROTHM OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN M37) 8-35 572-610 PVP4_ROTHN OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 3/STRAIN MCN13 8-35 573-628 PVP4_ROTHP OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 3/STRAIN P) 8-35 577-621 PVP4_ROTHR OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 3/STRAIN RRV) 8-38 105-135 235-262 PVP4_ROTHT OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 4/STRAIN 8-35 572-627 ST. THOMAS 3) PVP4_ROTHV OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 4/STRAIN VA70) 8-35 279-306 590-617 PVP4_ROTHW OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 8-35 577-621 PVP4_ROTP5 OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (SEROTYPE 5/STRAIN OSU) 112-146 584-625 PVP4_ROTPC OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 5-33 115-161 293-320 PVP4_ROTPG OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (STRAIN GOTTFRIED) 8-35 572-628 PVP4_ROTPY OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (STRAIN YM) 8-35 112-146 584-625 PVP4_ROTRH OUTER CAPSID PROTEIN VP4 RHESUS ROTARVIRUS 8-38 584-622 PVP4_ROTSF OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11-FEM) 8-35 589-619 PVP4_ROTSS OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11-SEM) 8-35 130-157 584-622 PVP4_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 28-62 PNS4 PVP5_AHSV4 OUTER CAPSID PROTEIN VP5 AFRICAN HORSES SICKNESS VIRUS 113-183 191-218 (SEROTYPE 4/STRAIN VACCINE) PVP5_BTV10 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 53-80 99-126 PVP5_BTV11 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 11/ISOLATE USA) 53-80 92-126 PVP5_BTV13 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 13/ISOLATE USA) 53-80 PVP5_BTV1A OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 53-80 89-126 AUSTRALIA) PVP5_BTV1S OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 53-80 92-126 148-182 SOUTH AFRICA) PVP5_BTV2A OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 2/ISOLATE USA) 53-80 89-126 PVP5_EHDV1 OUTER CAPSID PROTEIN VP5 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 31-80 191-218 399-426 (SEROTYPE 1) PVP5_WTV OUTER COAT PROTEIN P5 WOUND TUMOR VIRUS 648-675 PVP61_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 161-193 PVP61_MRDV PROB NONSTRUCT 41.0 KD PRO MAIZE ROUGH DWARF VIRUS 153-202 PVP61_NPVAC 61 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 36-63 POLYHEDROSIS VIRUS PVP62_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 157-189 PVP64_NPVOP MAJOR ENV GLYCOPRO ORGYIA PSEUDOTSUGATA MULTICAPSID 45-72 PRECURSOR POLYHEDROSIS VIRUS PVP67_NPVAC MAJOR ENV GLYCOPRO AUTOGRAPHA CALIFORNICA NUCLEAR 44-81 PRECURSOR POLYHEDROSIS VIRUS PVP6_BTV11 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 11/ISOLATE USA) 157-189 PVP6_BTV13 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 13/ISOLATE USA) 157-189 PVP6_BTV17 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 17/ISOLATE USA) 157-189 PVP6_BTV1S VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 161-193 SOUTH AFRICA) PVP6_BTV2A VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 2/ISOLATE USA) 133-172 PVP6_RDV STRUCTURAL PROTEIN P6 RICE DWARF VIRUS 10-37 354-381 PVP74_NPVAC P74 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 413-440 POLYHEDROSIS VIRUS PVP75_HSVSA PROBABLE MEMBRANE HERPESVIRUS SAIMIRI (STRAIN 11) 181-208 929-977 ANTIGEN 75 PVP79_NPVAC 79 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 44-78 370-397 POLYHEDROSIS VIRUS PVP7_EHDV1 VP7 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 16-43 (SEROTYPE 1) PVP7_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 458-485 PNS7 PVP80_NPVAC CAPSID PROTEIN P80 AUTOGRAPHA CALIFORNICA NUCLEAR 101-142 240-298 POLYHEDROSIS VIRUS PVP87_NPVOP CAPSID PROTEIN P87 ORGYIA PSEUDOTSUGATA MULTICAPSID 132-159 POLYHEDROSIS VIRUS PVP8_BTV10 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 105-132 PVP8_FOWPV STRUCTURAL PROTEIN VP8 FOWLPOX VIRUS 211-238 PRECURSOR PVP8_WTV OUTER CAPSID PROTEIN P8 WOUND TUMOR VIRUS 29-56 112-143 PVP9_RDV NONSTRUCTURAL PROTEIN RICE DWARF VIRUS 197-224 PNS9 PVP9_WTV STRUCTURAL PROTEIN P9 WOUND TUMOR VIRUS 22-49 PVP9_WTNVJ STRUCTURAL PROTEIN P9 WOUND TUMOR VIRUS (STRAIN NJ) 22-49 PVPHE_NPVAC 29 KD POLYHEDRAL ENVELOPE AUTOGRAPHA CALIFORNICA NUCLEAR 196-223 PROTEIN POLYHEDROSIS VIRUS PVPHE_NPVOP 32 KD POLYHEDRAL ENVELOPE ORGYIA PSEUDOTSUGATA MULTICAPSID 127-186 238-265 PROTEIN POLYHEDROSIS VIRUS PVPRT_ADEM1 ENDOPROTEASE MOUSE ADENOVIRUS TYPE 1 167-194 PVPU_HV1A2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 3-31 (ARV2/SF2 ISOLATE) PVPU_HV1B1 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-48 (BH10 AND HXB3 ISOLATES) PVPU_HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 21-48 (BH8 ISOLATE) PVPU_HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 22-49 (BRAIN ISOLATE) PVPU_HV1BR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-48 (BRU ISOLATE) PVPU_HV1C4 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 3-30 (CDC-451 ISOLATE) PVPU_HV1EL VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 6-33 (ELI ISOLATE) PVPU_HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-48 (HXB2 ISOLATE) PVPU_HV1J3 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 2-29 (JH3 ISOLATE) PVPU_HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 22-49 (JRCSF ISOLATE) PVPU_HV1MA VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-32 (MAL ISOLATE) PVPU_HV1ND VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 6-33 (NDK ISOLATE) PVPU_HV1PV VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-48 (PV22 ISOLATE) PVPU_HV1S1 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 22-49 (SF162 ISOLATE) PVPU_SIVCZ VPU PROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 51-78 PVPX_LDV VPX PROTEIN LACTATE DEHYDROGENASE-ELEVATING VIRUS 64-94 PVRNA_BSMV ALPHA-A PROTEIN BARLEY STRIPE MOSAIC VIRUS 1051- 1078 PVS06_ROTBS VP6 PROTEIN BOVINE ROTAVIRUS (GROUP C/STRAIN SHINTOKU) 6-43 PVS06_ROTGA VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV) 114-144 PVS06_ROTGI VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN IDIR) 28-55 PVS06_ROTHC VP6 PROTEIN HUMAN ROTAVIRUS 9-44 PVS06_ROTPC VP6 PROTEIN PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 9-44 PVS07_ROTBJ GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN KN-4) 2-29 PVS07_ROTBU NONSTRUCTURAL PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 91-146 199-236 NCVP3 PVS07_ROTP5 NONSTRUCTURAL PROTEIN PORCINE ROTAVIRUS (SEROTYPE 5/STRAIN OSU) 91-146 202-236 NCVP3 PVS07_ROTS1 NONSTRUCTURAL PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 91-146 199-236 NCVP3 PVS08_ROTBU NONSTRUCTURAL PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 164-201 NS2/VP9 PVS08_ROTS1 NONSTRUCTURAL PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 164-201 217-251 NCVP4 PVS09_ROTB4 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (SEROTYPE 6/STRAIN B641) 2-29 PVS09_ROTB5 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN A5) 2-29 PVS09_ROTBU GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN UK) 2-29 PVS09_ROTGA GLYCOPROTEIN VP7 ROTAVIRUS (GROUP B/STRAIN ADRV) 210-237 PRECURSOR PVS09_ROTH4 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 4/STRAIN RV-4) 2-29 PVS09_ROTHA GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN HU5) 2-29 PVS09_ROTHB GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE G/STRAIN B37) 2-29 PVS09_ROTHD GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN DS1) 2-29 PVS09_ROTHH GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN HN126) 2-29 PVS09_ROTHM GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN M37) 2-29 PVS09_ROTHO GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN MO 2-29 AND STRAIN D) PVS09_ROTHP GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 3/STRAIN P) 2-29 PVS09_ROTHS GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN S2) 2-29 PVS09_ROTHW GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 2-29 PVS09_ROTP2 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 3/STRAIN AT/76) 2-29 PVS09_ROTP3 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 3/STRAIN CRW-8) 2-29 PVS09_ROTS1 GLYCOPROTEIN VP7 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 2-29 PVS10_ROTBS MINOR OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (GROUP C/STRAIN SHINTOKU) 125-152 PVS10_ROTS1 NONSTRUCTURAL GLYCO- SIMIAN 11 ROTAVIRUS (STRAIN SA11) 113-140 PROTEIN NCVP5 PVS11_ROTBU MINOR OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 13-40 114-145 PVS11_ROTBV MINOR OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (STRAIN VMRI) 13-40 114-145 PVS11_ROTGA NONSTRUCTURAL PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV) 31-60 (ADULT DIARRHEA ROTAVIRUS) PVS11_ROTH5 MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN RV-5) 13-40 111-145 PVS11_ROTHD MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN DS1) 13-40 111-145 PVS11_ROTHW MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 111-145 PVS11_ROTRA MINOR OUTER CAPSID PROTEIN RABBIT ROTAVIRUS (STRAIN ALABAMA) 118-145 PVS11_ROTS1 MINOR OUTER CAPSID PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 111-146 PVSH_MUMP1 SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS 9-46 PVSH_MUMPA SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN MATSUYAMA) 12-41 PVSH_MUMPB SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN BELFAST) 9-41 PVSH_MUMPE SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN ENDERS) 9-46 PVSH_MUMPJ SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN JERYL-LYNN) 9-46 PVSH_MUMPK SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN KILHAM) 9-46 PVSH_MUMPL SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN BRISTOL 1) 9-46 PVSH_MUMPM SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 12-41 PVSH_MUMPR SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN RW) 9-41 PVSH_MUMPU SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN URABE VACCINE AM9) 12-41 PVSI1_REOVD SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 3/STRAIN DEARING) 26-63 71-122 127-168 222-259 PVSI1_REOVJ SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 2/STRAIN D5/JONES) 4-104 130-193 PVSI1_REOVL SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 1/STRAIN LANG) 4-52 75-104 112-160 PVSI2_REOVD SIGMA 2 PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 350-384 PVSI3_REOVJ SIGMA 3 PROTEIN REOVIRUS (TYPE 2/STRAIN D5/JONES) 289-316 PVSIS_REOVD SIGMA 1-S PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 90-117 PVSIS_REOVL SIGMA 1-S PROTEIN REOVIRUS (TYPE 1/STRAIN LANG) 50-77 PVT3A_CAPVI PROTEIN T3A CAPRIPOXVIRUS (STRAIN INS-1) 124-158 PVT5_SFVKA PROTEIN T5 SHOPE FIBROMA VIRUS (STRAIN KASZA) 250-277 PVTER_EBV PROBABLE DNA PACKAGING EPSTEIN-BARR VIRUS (STRAIN B95-8) 234-290 PROTEIN PVTER_HCMVA PROBABLE DNA PACKAGING HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 417-451 PROTEIN PVTER_HSV6U PROBABLE DNA PACKAGING HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 176-203 PROTEIN UGANDA-1102) PVTER_HSVI1 PROBABLE DNA PACKAGING ICTALURID HERPESVIRUS 1 710-737 PROTEIN PVTER_VZVD PROBABLE DNA PACKAGING VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 394-421 PROTEIN PVTP3_TTV1V VIRAL PROTEIN TPX THERMOPROTEUS TENAX VIRUS 1 (STRAIN VT3) 169-196 PVTPX_TTV1 VIRAL PROTEIN TPX THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 169-196 PVV_PI4HA V PROTEIN HUMAN PARAINFLUENZA 4A VIRUS 4-38 (STRAIN TOSHIBA) PY101_SSV1 HYPOTHETICAL 10.1 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 25-65 PROTEIN PY108_SSV1 HYPOTHETICAL 10.8 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 4-61 PROTEIN PY119_SSV1 HYPOTHETICAL 11.9 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 30-78 PROTEIN PY11K_TYDVA HYPOTHETICAL 11.2 KD TOBACCO YELLOW DWARF VIRUS 53-87 PROTEIN (STRAIN AUSTRALIA) PY13K_NPVAC HYPOTH 13.1 KD IN 39 KD AUTOGRAPHA CALIFORNICA NUCLEAR 85-112 5′REGION POLYHEDROSIS VIRUS PY13K_SSV1 HYPOTHETICAL 13.2 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 59-86 PROTEIN PY14K_SSV1 HYPOTHETICAL 13.7 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 5-39 PROTEIN PY16K_NPVAC HYPOTH IN 39 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 80-107 5′REGION POLYHEDROSIS VIRUS PY16K_SSV1 HYPOTHETICAL 15.6 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 77-111 PROTEIN PY17K_SSV1 HYPOTHETICAL 17.8 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 9-36 119-153 PROTEIN PY18K_MSVN HYPOTHETICAL 17.7 KD MAIZE STREAK VIRUS (NIGERIAN ISOLATE) 34-61 PROTEIN PY18K_MSVS HYPOTHETICAL 17.2 KD MAIZE STREAK VIRUS (SOUTH-AFRICAN ISOLATE) 34-61 PROTEIN PY20K_SSV1 HYPOTHETICAL 20.4 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 76-103 PROTEIN PY28K_SSV1 HYPOTHETICAL 28.5 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 93-164 PROTEIN PY2_SOCMV HYPOTHETICAL PROTEIN 2 SOYBEAN CHLOROTIC MOTTLE VIRUS 118-148 PY31K_SSV1 HYPOTHETICAL 31.5 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 24-97 PROTEIN PY32K_SSV1 HYPOTHETICAL 31.7 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 233-267 PROTEIN PY38K_NPVAC HYPOTHETICAL 37.7 KD AUTOGRAPHA CALIFORNICA NUCLEAR 133-184 PROTEIN POLYHEDROSIS VIRUS PY3_SOCMV HYPOTHETICAL PROTEIN 3 SOYBEAN CHLOROTIC MOTTLE VIRUS 122-149 PY7_SOCMV HYPOTHETICAL PROTEIN 7 SOYBEAN CHLOROTIC MOTTLE VIRUS 56-94 PY85K_SSV1 HYPOTHETICAL 85.7 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 81-121 546-573 658-700 PROTEIN PY8_SOCMV HYPOTHETICAL PROTEIN 8 SOYBEAN CHLOROTIC MOTTLE VIRUS 13-40 PYB01_FOWPM HYPOTHETICAL BAMHI-ORF1 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 74-108 152-179 184-218 PROTEIN PYB05_FOWPM HYPOTHETICAL BAMHI-ORF5 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 62-89 PROTEIN PYB10_FOWPM HYPOTHETICAL BAMHI-ORF10 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 162-197 214-241 PROTEIN PYB12_FOWPM HYPOTHETICAL BAMHI-ORF12 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 11-38 PROTEIN PYB13_FOWPM HYPOTHETICAL BAMHI-ORF13 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 128-167 PROTEIN PYBL3_FOAMV BEL-3 PROTEIN HUMAN SPUMARETROVIRUS 87-116 PYDH1_HSVS7 HYPOTH 24.1 KD IN DHFR HERPESVIRUS SAIMIRI (STRAIN 484-77) 161-188 3′REGION PYDH1_HSVSC HYPOTH 28.7 KD IN DHFR HERPESVIRUS SAIMIRI (SUBGROUP C/STRAIN 488) 52-82 3′REGION PYDH4_HSVSC HYPOTH 9.9 KD IN DHFR HERPESVIRUS SAIMIRI (SUBGROUP C/STRAIN 488) 53-83 3′REGION PYF26_FOWP1 HYPOTHETICAL 25.9 KD FOWLPOX VIRUS (STRAIN FP-1) 8-35 PROTEIN PYF30_FOWP1 HYPOTHETICAL 30.9 KD FOWLPOX VIRUS (STRAIN FP-1) 170-204 PROTEIN PYH22_VACCV HYPOTH 21.7 KD HINDIII-C PRO VACCINIA VIRUS (STRAIN WR) 37-64 95-126 144-171 PYHR3_VACCV HYPOTH HOST RANGE 27.4 KD VACCINIA VIRUS (STRAIN WR) 31-58 179-206 PRO PYKR2_EBV HYPOTHETICAL BKRF2 EPSTEIN-BARR VIRUS (STRAIN B95-8) 90-121 PROTEIN PYKR4_EBV HYPOTHETICAL BKRF4 EPSTEIN-BARR VIRUS (STRAIN B95-8) 19-53 PROTEIN PYL15_ADE41 HYPOTH 12.4 KD IN 33 KD HUMAN ADENOVIRUS TYPE 41 47-86 REGION PYLR3_EBV HYPOTHETICAL BLRF3 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 27-54 PYOR1_COYMV HYPOTHETICAL 23 KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS 94-143 PYOR2_COYMV HYPOTHETICAL 15 KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS 35-76 PYOR3_WCMVM HYPOTHETICAL 13 KD PROTEIN WHITE CLOVER MOSAIC VIRUS (STRAIN M) 64-94 PYOR3_WCMVO HYPOTHETICAL 13 KD PROTEIN WHITE CLOVER MOSAIC VIRUS (STRAIN O) 65-95 PYOR5_ADEG1 HYPOTHETICAL 31.5 KD AVIAN ADENOVIRUS GALI (STRAIN PHELPS) 92-119 PROTEIN PYORA_TTV1 HYPOTHETICAL 8.1 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 23-57 PYORL_TTV1 HYPOTHETICAL 26.8 KD THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 15-42 PROTEIN PYORQ_TTV1 HYPOTHETICAL 7.3 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 3-31 PYORW_TTV1 HYPOTHETICAL 12.1 KD THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 4-40 PROTEIN PYP12_RTBV HYPOTHETICAL P12 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 44-71 PYP12_RTBVP HYPOTHETICAL P12 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 44-71 (ISOLATE PHILIPPINES) PYP24_RTBV HYPOTHETICAL P24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 59-101 106-157 PYP24_RTBVP HYPOTHETICAL P24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 51-101 106-157 (ISOLATE PHILIPPINES) PYP46_RTBV HYPOTHETICAL P46 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 58-107 197-231 PYP46_RTBVP HYPOTHETICAL P46 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 58-107 197-231 (ISOLATE PHILIPPINES) PYP63_NPVAC HYPOTH PRO P6.5 5′REGION AUTOGRAPHA CALIFORNICA NUCLEAR 44-71 POLYHEDROSIS VIRUS PYP63_NPVOP HYPOTH 40.0 KD IN P6.5 ORGYIA PSEUDOTSUGATA MULTICAPSID 325-352 5′REGION POLYHEDROSIS VIRUS PYPOH_NPVAC HYPOTH 23.6 KD IN AUTOGRAPHA CALIFORNICA NUCLEAR 116-153 POLYHEDRIN 5′REGION POLYHEDROSIS VIRUS PYPOL_IPNVN HYPOTHETICAL 17.0 KD INFECTIOUS PANCREATIC NECROSIS VIRUS 5-32 PROTEIN (STRAIN N1) PYQ3_AMEPV HYPOTHETICAL PROTEIN IN AMSACTA MOOREI ENTOMOPOXVIRUS 8-57 59-96 156-183 TK 3′REGION PYRF1_HSV6G HYPOTHETICAL PROTEIN RF1 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 208-235 PYRF2_HSV6G HYPOTHETICAL PROTEIN RF2 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 223-257 268-299 PYRF3_HSV6G HYPOTHETICAL PROTEIN RF3 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 141-168 PYRF4_HSV6G HYPOTHETICAL PROTEIN RF4 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 404-441 PYRP2_IRV6 REPETITIVE PROTEIN ORF2 CHILO IRIDESCENT VIRUS 10-45 PYVAG_VACCC HYPOTHETICAL 9.3 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 7-34 PYVAH_VACCC HYPOTHETICAL 14.5 KD VACCINIA VIRUS (STRAIN COPENHAGEN) 81-112 PROTEIN PYVDB_VACCC HYPOTHETICAL 8.5 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 29-77 PYVDB_VACCV HYPOTHETICAL 8.5 KD PROTEIN VACCINIA VIRUS (STRAIN WR) 46-77 PYVDH_VACCV HYPOTHETICAL 7.2 KD PROTEIN VACCINIA VIRUS (STRAIN WR) 20-50 PYVGB_VACCC HYPOTHETICAL 8.4 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 10-44 PYZL2_EBV HYPOTHETICAL BZLF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 152-179

TABLE VII 107 × 178 × 4 SEARCH MOTIF RESULTS SUMMARY (PREFERRED VIRAL SEQUENCES) PCGENE 107 × 178 × 4 All Viruses (no bacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 AREA 9 PPOL_MLVAK POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS 453-480 PENV_MLVAV ENV POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 517-544 PPOL_MLVAV POL POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 805-832 PMYC_AVIM2 MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS 232-266 375-402 VIRUS CMII PMYC_AVIMD MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS 233-267 376-403 VIRUS HBI PMYC_AVIMC MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS 233-267 376-403 VIRUS MC29 VL1_FPVL PROBABLE L1 PROTEIN AVIAN PAPILLOMA VIRUS 38-65 FPV-L PVGLB_HSVB1 GLYCOPROTEIN I BOVINE HERPES VIRUS TYPE 1 427-454 PRECURSOR PRIR2_HSVB3 RIBONUC-DIPHOSPH REDUCT BOVINE HERPES VIRUS TYPE 1 90-117 SMALL CHA (STRAIN 34) PVGLB_HSVB2 GLYCOPROTEIN B-1 BOVINE HERPES VIRUS TYPE 2 447-474 PRECURSOR (STRAIN BMV) PENV_BIV06 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY 17-44 544-603 631-695 VIRUS (ISOLATE 106) PENV_BIV27 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY 17-44 573-632 660-724 VIRUS (ISOLATE 127) PENV_BLVAF ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (AMERICAN ISOLATE FLK) PENV_BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (AMERICAN ISOLATE VDM) PENV_BLVAU ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (AUSTRALIAN ISOLATE) PENV_BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 311-377 (BELGIUM ISOLATE LB285) PENV_BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (BELGIUM ISOLATE LB59) PENV_BLVJ ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (JAPANESE ISOLATE BLV-1) PHEMA_P13B HEMAGGLUTININ- BOVINE PARAINFLUENZA 3 66-93 NEURAMINIDASE VIRUS PRRPP_P13B RNA POLYMERASE ALPHA BOVINE PARAINFLUENZA 3 34-91 255-282 285-314 SUBUNIT VIRUS PVGLF_P13B FUSION GLYCOPROTEIN BOVINE PARAINFLUENZA 3 115-182 207-241 459-497 PRECURSOR VIRUS PVMAT_P13B MATRIX PROTEIN BOVINE PARAINFLUENZA 3 201-231 VIRUS PRRPP_BRSVA RNA POLYMERASE ALPHA BOVINE RESPIRATORY 99-133 SUBUNIT SYNCYTIAL VIRUS (STRAIN A51908) PVGLF_BRSVA FUSION GLYCOPROTEIN BOVINE RESPIRATORY 38-65 154-202 216-243 442-469 486-531 PRECURSOR SYNCYTIAL VIRUS (STRAIN A51908) PVMA2_BRSVA MATRIX GLYCOPROTEIN M2 BOVINE RESPIRATORY 124-152 SYNCYTIAL VIRUS (STRAIN A51908) PVMAT_BRSVA MATRIX PROTEIN BOVINE RESPIRATORY 219-246 SYNCYTIAL VIRUS (STRAIN A51908) PVGLF_BRSVC FUSION GLYCOPROTEIN BOVINE RESPIRATORY 38-65 154-202 216-243 444-471 488-533 PRECURSOR SYNCYTIAL VIRUS (STRAIN COPENHAGEN) PVGLG_BRSVC MAJOR SURFACE BOVINE RESPIRATORY 92-123 GLYCOPROTEIN G SYNCYTIAL VIRUS (STRAIN COPENHAGEN) PVGLF_BRSVR FUSION GLYCOPROTEIN BOVINE RESPIRATORY 38-65 154-202 216-243 444-471 488-533 PRECURSOR SYNCYTIAL VIRUS (STRAIN RB94) PENV_MLVCB ENV POLYPROTEIN CAS-BR-E MURINE LEUKEMIA 510-539 VIRUS PENV_SIVCZ ENV POLYPROTEIN CHIMPANZEE IMMUNO- 160-187 253-289 336-366 526-584 627-654 DEFICIENCY VIRUS PVPU_SIVCZ VPU PROTEIN CHIMPANZEE IMMUNO- 51-78 DEFICIENCY VIRUS PPOL_SIVCZ POL POLYPROTEIN CHIMPANZEE IMMUNO- 242-269 626-685 DEFICIENCY VIRUS (SIV(CPZ)) PVE2_CRPVK PROBABLE E2 PROTEIN COTTONTAIL RABBIT (SHOPE) 5-34 PAPILLOMAVIRUS (STRAIN KANSAS) VL1_CRPVK PROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) 331-383 PAPILLOMAVIRUS (STRAIN KANSAS) PPOLG_DEN1S GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 1858-1885 2890-2935 2989-3016 SINGAPORE S275/90) PPOLG_DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-1571 1858-1885 2908-2935 2982-3016 3117-3147 16681) PPOLG_DEN27 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-1571 1858-1885 2485-2519 2908-2935 2982-3016 3117-3147 16681-PDK53) PPOLG_DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-1571 1858-1885 2908-2935 3117-3147 3346-3373 JAMAICA PPOLG_DEN2P GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-1571 1858-1885 2905-2932 2979-3013 3114-3144 3343-3370 PR159/S1) PPOLG_DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1134-1161 1448-1475 TONGA 1974) PPOLG_DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 837-864 1542-1569 1857-1884 2494-2521 2980-3014 3345-3372 PPOLG_DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4 2885-2930 2977-3011 3342-3369 PDPOL_HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS 5-39 SHANGHAI DUCK ISOLATE S5) PDPOL_HPBDC DNA POLYMERASE DUCK HEPATITIS B VIRUS 5-39 (STRAIN CHINA) PDPOL_HPBDW DNA POLYMERASE DUCK HEPATITIS B VIRUS 5-39 304-331 (WHITE SHANGHAI DUCK ISOLATE S31) PTEGU_EBV LARGE TEGUMENT EPSTEIN-BARR VIRUS (STRAIN 145-172 1215-1242 1344-1371 1876-1903 PROTEIN B95-8) PUL06_EBV VIRION PROTEIN BBRF1 EPSTEIN-BARR VIRUS (STRAIN 115-142 313-340 542-569 B95-8) PUL11_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN 15-42 BBLF1 B95-8) PUL52_EB PROB DNA REPLICATION EPSTEIN-BARR VIRUS (STRAIN 185-212 787-814 PROTEIN BSLF1 B95-8) PUL87_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN 409-436 B(C)RF1 B95-8) PUL92_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN 107-144 168-196 BDLF4 B95-8) PVCAP_EBV MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS (STRAIN 847-874 B95-8) PVGL2_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 68-102 GLYCOPROTEIN B95-8) PVGLB_EBV GLYCOPROTEIN GP110 EPSTEIN-BARR VIRUS (STRAIN 95-122 631-658 PRECURSOR B95-8) PVGLH_EBV GLYCOPROTEIN GP85 EPSTEIN-BARR VIRUS (STRAIN 549-576 619-648 PRECURSOR B95-8) PVGP8_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 104-149 ANTIGEN GP85 B95-8) PVP40_EBV CAPSID PROTEIN P40 EPSTEIN-BARR VIRUS (STRAIN 440-470 B95-8) PVTER_EBV PROBABLE DNA EPSTEIN-BARR VIRUS (STRAIN 234-290 PACKAGING PROTEIN B95-8) PYKR2_EBV HYPOTHETICAL BKRF2 EPSTEIN-BARR VIRUS (STRAIN 90-121 PROTEIN B95-8) PYKR4_EBV HYPOTHETICAL BKRF4 EPSTEIN-BARR VIRUS (STRAIN 19-53 PROTEIN B95-8) PYLR3_EBV HYPOTHETICAL BLRF3 EPSTEIN-BARR VIRUS (STRAIN 27-54 PROTEIN B95-8) PYZL2_EBV HYPOTHETICAL BZLF2 EPSTEIN-BARR VIRUS (STRAIN 152-179 PROTEIN B95-8) PBZLF_EBV BZLF1 TRANS-ACTIVATOR EPSTEIN-BARR VIRUS (STRAIN 193-220 PROTEIN B95-8) PDNB1_EBV MAJOR DNA-BINDING EPSTEIN-BARR VIRUS (STRAIN 977-1004 1041-1068 PROTEIN B95-8) PEAR_EBV EARLY ANTIGEN PROTEIN R EPSTEIN-BARR VIRUS (STRAIN 55-82 B95-8) PLMP1_EBV LATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 148-175 PROTEIN 1 B95-8) PLMP2_EBV GENE TERMINAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN 294-321 B95-8) PLMP1_EBVC LATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 148-175 PROTEIN 1 CAO) PLMP1_EBVR LATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 148-175 PROTEIN 1 RAJI) PUL32_HSVEB MAJOR ENVELOPE EQUINE HERPES VIRUS TYPE 1 345-375 GLYCOPROTEIN 300 PVGLC_HSVEB GLYCOPROTEIN C EQUINE HERPES VIRUS TYPE 1 124-151 PRECURSOR PVGLB_HSVE1 GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 1 443-470 934-961 PRECURSOR (ISOLATE HVS25A) PVGLB_HSVEA GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 1 443-470 934-961 PRECURSOR (STRAIN AB1) PATI2_HSVEB ALPHA TRANS-IND FACTOR EQUINE HERPES VIRUS TYPE 1 294-321 82 KD PRO (STRAIN AB4P) PATIN_HSVEB ALPHA TRANS-IND PROTEIN EQUINE HERPES VIRUS TYPE 1 255-289 (STRAIN AB4P) PHELI_HSVEB PROBABLE HELICASE EQUINE HERPES VIRUS TYPE 1 184-211 321-348 (STRAIN AB4P) PRIRI_HSVEB RIBONUC-DIPHOSPH EQUINE HERPES VIRUS TYPE 1  75-102 REDUCT LARGE CHA (STRAIN AB4P) PTEGU_HSVEB LARGE TEGUMENT PROTEIN EQUINE HERPES VIRUS TYPE 1 229-256 566-593 1205-1232 (STRAIN AB4P) PUL06_HSVEB VIRION GENE 56 PROTEIN EQUINE HERPES VIRUS TYPE 1 640-667 (STRAIN AB4P) PUL14_HSVEB HYPOTHETICAL GENE 48 EQUINE HERPES VIRUS TYPE 1 247-286 PROTEIN (STRAIN AB4P) PUL21_HSVEB GENE 40 PROTEIN EQUINE HERPES VIRUS TYPE 1 44-71 (STRAIN AB4P) PUL37_HSVEB GENE 23 PROTEIN EQUINE HERPES VIRUS TYPE 1 715-749  987-1014 (STRAIN AB4P) PUL52_HSVEB DNA REPLICATION PROTEIN EQUINE HERPES VIRUS TYPE 1 193-220 943-970 UL52 (STRAIN AB4P) PVG03_HSVEB GENE 3 PROTEIN EQUINE HERPES VIRUS TYPE 1 146-176 (STRAIN AB4P) PVGLB_HSVEB GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 1 443-470 934-961 PRECURSOR (STRAIN AB4P) PVGLG_HSVEB GLYCOPROTEIN G EQUINE HERPES VIRUS TYPE 1 383-410 PRECURSOR (STRAIN AB4P) VIMP_HSVEB PROB INTEGRAL MEMBRANE EQUINE HERPES VIRUS TYPE 1 147-174 PROTEIN (STRAIN AB4P) PVP26_HSVEB CAPSID PROTEIN VP26 EQUINE HERPES VIRUS TYPE 1 36-63 (STRAIN AB4P) PVG03_HSVEK GENE 3 PROTEIN EQUINE HERPES VIRUS TYPE 1 146-176 (STRAIN KENTUCKY A) PVGLB_HSVEL GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 1 443-470 933-960 PRECURSOR (STRAIN KENTUCKY D) PCELF_HSVEB CELL FUSION PROTEIN EQUINE HERPES VIRUS TYPE 1 312-339 PRECURSOR (STRAINS AB4P and Ky A) PUL47_HSVE4 97 KD ALPHA TRANS-INDUCING EQUINE HERPES VIRUS TYPE 4 190-217 PROTEIN PVGLB_HSVE4 GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 4 486-513 616-643 PRECURSOR PVGLG_HSVE4 GLYCOPROTEIN G EQUINE HERPES VIRUS TYPE 4 271-298 PRECURSOR PDUT_HSVE4 DEOXYU 5′-TRIPHOSPH EQUINE HERPES VIRUS TYPE 4  90-117 NUCHYDROLASE (STRAIN 1942) PVE2_PAPVE PROBABLE E2 PROTEIN EUROPEAN ELK PAPILLOMA- 120-150 VIRUS PENV_FIVPE ENV POLYPROTEIN FELINE IMMUNODEFICIENCY 650-680 722-749 VIRUS (ISOLATE PETALUMA) PPOL_FIVPE POL POLYPROTEIN FELINE IMMUNODEFICIENCY 442-473 VIRUS (ISOLATE PETALUMA) PENV_FIVSD ENV POLYPROTEIN FELINE IMMUNODEFICIENCY 639-668 720-747 VIRUS (ISOLATE SAN DIEGO) PENV_FIVT2 ENV POLYPROTEIN FELINE IMMUNODEFICIENCY 640-679 721-748 VIRUS (ISOLATE TM2) PENV_FLVC6 ENV POLYPROTEIN FELINE LEUKEMIA PROVIRUS 509-538 (CLONE CFE-6) PMYC_FLVTT MYC TRANSFORMING FELINE LEUKEMIA PROVIRUS 393-420 PROTEIN FTT PMYC_FLV MYC TRANSFORMING FELINE LEUKEMIA VIRUS 393-420 PROTEIN PENV_FLVGL ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 490-519 (STRAIN A/GLASGOW-1) PENV_FLVLB ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 510-539 (STRAIN LAMBDA-B1) PENV_FLVSA ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 487-516 (STRAIN SARMA) PENV_MLVF5 ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 523-553 VIRUS (ISOLATE 57) PENV_MLVTF ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 523-553 VIRUS (ISOLATE FB29) PENV_MLVFP ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 523-553 VIRUS (ISOLATE PVC-211) PENV_GALV ENV POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 176-203 523-564 PGAG_GALV GAG POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 396-442 447-474 PPOL_GALV POL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 535-562 676-703 PDPOL_HPBGS DNA POLYMERASE GROUND SQUIRREL HEPATITIS 271-325 VIRUS PPOLG_HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1117-1149 1454-1481 18F) PPOLG_HPAV2 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1117-1149 1454-1481 24A) PPOLG_HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1117-1149 1454-1481 43C) PPOLG_HPAVC GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 CR326) PPOLG_HPAVG GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 182-216 GA76) PPOLG_HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1103-1149 HM-175) PPOLG_HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1103-1149 LA) PPOLG_HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1103-1149 MBB) PDPOL_HPBVP DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 456-483 ADW/STRAIN PHILIPPINO/ PFDW294) PDPOL_HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 443-470 ADYW) PPOLG_HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1) 702-729 PPOLG_HCVBK GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 702-729 1045-1072 BK) PPOLG_HCVH GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE H) 702-729 1045-1072 PPOLG_HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 374-401 2089-2116 HC-J6) PPOLG_HCVJ8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1049-1076 2089-2116 HC-J8) PPOLG_HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 702-729 1045-1072 HC-JT) PPOLG_HCVJA GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 378-405 702-729 1045-1072 JAPANESE) PPOLG_HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 702-729 1045-1072 TAIWAN) PAANT_HDVAM DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PAANT_HDVD3 DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PAANT_HDVS1 DELTA ANTIGEN HEPATITIS DELTA VIRUS 16-43 106-133 (ISOLATE AMERICAN) PAANT_HDVS2 DELTA ANTIGEN HEPATITIS DELTA VIRUS 16-43 106-133 (ISOLATE AMERICAN) PAANT_HDVWO DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PAANT_HDVIT DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PAANT_HDVM2 DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PPOLN_HEVBU NON-STRUCTURAL POLY- HEPATITIS E VIRUS (STRAIN 219-246 349-376 PROTEIN BURMA) PPOLN_HEVME NON-STRUCTURAL POLY- HEPATITIS E VIRUS (STRAIN 219-246 349-376 PROTEIN MEXICO) PPOLN_HEVMY N-STRUCTURAL POLY- HEPATITIS E VIRUS (STRAIN 219-246 349-376 PROTEIN MYANMAR) PPOLN_HEVPA NON-STRUCTURAL POLY- HEPATITIS E VIRUS (STRAIN 218-245 348-375 PROTEIN PAKISTAN) PDPOL_HPBHE DNA POLYMERASE HERON HEPATITIS B VIRUS 5-39 PVMSA_HPBHE MAJOR SURFACE ANTIGEN HERON HEPATITIS B VIRUS 294-328 PRECURSOR PIE63_HSV11 TRANSCRIPTIONAL HERPES SIMPLEX VIRUS 248-275 REGULATOR IE63 (TYPE 1/STRAIN 17) PIE68_HSV11 IMMEDIATE-EARLY HERPES SIMPLEX VIRUS 40-67 PROTEIN IE68 (TYPE 1/STRAIN 17) PTEGU_HSV11 LARGE TEGUMENT HERPES SIMPLEX VIRUS 667-694 1673-1710 PROTEIN (TYPE 1/STRAIN 17) PUL06_HSV11 VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS 586-613 (TYPE 1/STRAIN 17) PUL34_HSV11 VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS 116-143 (TYPE 1/STRAIN 17) PUL37_HSV11 PROTEIN UL37 HERPES SIMPLEX VIRUS 470-497 853-884 (TYPE 1/STRAIN 17) PUL42_HSV11 DNA-BINDING PROTEIN UL42 HERPES SIMPLEX VIRUS 231-258 (TYPE 1/STRAIN 17) PUL47_HSV11 VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS 488-515 (TYPE 1/STRAIN 17) PVGLC_HSV11 GLYCOPROTEIN C HERPES SIMPLEX VIRUS 469-510 PRECURSOR (TYPE 1/STRAIN 17) PAT12_HSV11 ALPHA TRANS-IND FACTOR HERPES SIMPLEX VIRUS 308-335 78 KD PRO (TYPE 1/STRAIN 17) PUL47_HSV1F VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS 488-515 (TYPE 1/STRAIN F) PAT12_HSV1F ALPHA TRANS-IND FACTOR HERPES SIMPLEX VIRUS 308-335 77 KD PRO (TYPE 1/STRAIN F) PVGLC_HSV1K GLYCOPROTEIN C HERPES SIMPLEX VIRUS 469-510 PRECURSOR (TYPE 1/STRAIN KOS) PVGLE_HSV2 GLYCOPROTEIN E HERPES SIMPLEX VIRUS 111-148 PRECURSOR (TYPE 2) PTEGU_HSV6G LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 102-129 228-262 567-611 962-993 1098-1181 1661-1688 1884-1911 (TYPE 6/STRAIN GS) PVGLH_HSV6G GLYCOPROTEIN H HERPES SIMPLEX VIRUS 62-89 360-403 PRECURSOR (TYPE 6/STRAIN GS) PYRF1_HSV6G HYPOTHETICAL PROTEIN RF1 HERPES SIMPLEX VIRUS 208-235 (TYPE 6/STRAIN GS) PYRF2_HSV6G HYPOTHETICAL PROTEIN RF2 HERPES SIMPLEX VIRUS 223-257 268-299 (TYPE 6/STRAIN GS) PYRF3_HSV6G HYPOTHETICAL PROTEIN RF3 HERPES SIMPLEX VIRUS 141-168 (TYPE 6/STRAIN GS) PYRF4_HSV6G HYPOTHETICAL PROTEIN RF4 HERPES SIMPLEX VIRUS 404-441 (TYPE 6/STRAIN GS) PP100_HSV6J MAJOR ANTIGENIC HERPES SIMPLEX VIRUS 81-108 189-216 688-715 785-812 STRUCTL PROTEIN (TYPE 6/STRAIN UGANDA-1102) PUL87_HSV6U HYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS 536-563 729-768 (TYPE 6/STRAIN UGANDA-1102) PUL95_HSV6U HYPOTHETICAL PROTEIN 13R HERPES SIMPLEX VIRUS  73-100 105-134 (TYPE 6/STRAIN UGANDA-1102) PVCAP_HSV6U MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS 136-170 355-382 (TYPE 6/STRAIN UGANDA-1102) PVTER_HSV6U PROBABLE DNA PACKAGING HERPES SIMPLEX VIRUS 176-203 PROTEIN (TYPE 6/STRAIN UGANDA-1102) PTYSY_HSVAT THYMIDYLATE SYNTHASE HERPES VIRUS ATELES 116-143 PDPOL_HSVSA DNA POLYMERASE HERPES VIRUS SAIMIRI 625-652 (STRAIN 11) PDUT_HSVSA DEOXYU 5′-TRIPHOSPH HERPES VIRUS SAIMIRI 179-213 NUCHYDROLASE (STRAIN 11) PHEL1_HSVSA PROBABLE HELICASE HERPES VIRUS SAIMIRI 418-449 (STRAIN 11) PIC18_HSVSA PROBABLE PROC & HERPES VIRUS SAIMIRI 58-85 482-522 TRANSPORT PRO (STRAIN 11) PIE68_HSVSA IMMEDIATE-EARLY PROTEIN HERPES VIRUS SAIMIRI 48-78 (STRAIN 11) PKITH_HSVSA THYMIDINE KINASE HERPES VIRUS SAIMIRI 340-386 (STRAIN 11) PRIR1_HSVSA RIBONUC-DIPHOSPH HERPES VIRUS SAIMIRI 324-351 REDUCT LARGE CHA (STRAIN 11) PTEGU_HSVSA PROBABLE LARGE HERPES VIRUS SAIMIRI 524-607 672-700 777-814 846-898 949-986  990-1017 1467-1497 2102-2135 TEGUMENT PROTEIN (STRAIN 11) PTYSY_HSVSA THYMIDYLATE SYNTHASE HERPES VIRUS SAIMIRI 120-147 (STRAIN 11) PUL06_HSVSA VIRION GENE 43 PROTEIN HERPES VIRUS SAIMIRI 15-42 302-358 368-402 (STRAIN 11) PUL25_HSVSA VIRION GENE 19 PROTEIN HERPES VIRUS SAIMIRI 34-61 204-231 362-389 (STRAIN 11) PUL34_HSVSA GENE 67 PROTEIN HERPES VIRUS SAIMIRI 208-235 (STRAIN 11) PUL37_HSVSA GENE 63 PROTEIN HERPES VIRUS SAIMIRI 31-65 685-737 (STRAIN 11) PUL52_HSVSA PROB DNA REP GENE 56 HERPES VIRUS SAIMIRI 130-157 PROTEIN (STRAIN 11) PUL73_HSVSA HYPOTHETICAL GENE 53 HERPES VIRUS SAIMIRI  9-36 PROTEIN (STRAIN 11) PUL87_HSVSA HYPOTHETICAL GENE 24 HERPES VIRUS SAIMIRI 582-609 PROTEIN (STRAIN 11) PUL92_HSVSA HYPOTHETICAL GENE 31 HERPES VIRUS SAIMIRI 92-122 PROTEIN (STRAIN 11) PUNG_HSVSA URACIL-DNA GLYCOSYLASE HERPES VIRUS SAIMIRI 135-176 (STRAIN 11) PVCAP_HSVSA MAJOR CAPSID PROTEIN HERPES VIRUS SAIMIRI 769-799 (STRAIN 11) PVG45_HSVSA HYPOTHETICAL GENE 45 HERPES VIRUS SAIMIRI 138-165 PROTEIN (STRAIN 11) PVG48_HSVSA HYPOTHETICAL GENE 48 HERPES VIRUS SAIMIRI 360-394 PROTEIN (STRAIN 11) PVG52_HSVSA HYPOTHETICAL GENE 52 HERPES VIRUS SAIMIRI 47-74 PROTEIN (STRAIN 11) PVGLH_HSVSA GLYCOPROTEIN H HERPES VIRUS SAIMIRI 388-415 PRECURSOR (STRAIN 11) VIMP_HSVSA INTEGRAL MEMBRANE HERPES VIRUS SAIMIRI  80-107 PROTEIN (STRAIN 11) PVP23_HSVSA PROBABLE CAPSID PROTEIN HERPES VIRUS SAIMIRI  2-29 VP23 (STRAIN 11) PVP26_HSVSA CAPSID PROTEIN VP26 HERPES VIRUS SAIMIRI 48-75 (STRAIN 11) PVP40_HSVSA CAPSID PROTEIN P40 HERPES VIRUS SAIMIRI 205-232 344-372 (STRAIN 11) PVP75_HSVSA PROBABLE MEMBRANE HERPES VIRUS SAIMIRI 181-208 929-977 ANTIGEN 75 (STRAIN 11) PDNBI_HSVSA MAJOR DNA-BINDING HERPES VIRUS SAIMIRI 333-368 512-539 PROTEIN (STRAIN 11) PCGH2_HSVSA CYCLIN HOMOLOG HERPES VIRUS SAIMIRI 127-154 (STRAIN 11) PYDH1_HSVS7 HYPOTH 24.1 KD IN DHFR HERPES VIRUS SAIMIRI 161-188 3′REGION (STRAIN 484-77) PYDH1_HSVSC HYPOTH 28.7 KD IN DHFR HERPES VIRUS SAIMIRI 52-82 3′REGION (SUBGROUP C/STRAIN 488) PYDH4_HSVSC HYPOTH 9.9 KD IN DHFR HERPES VIRUS SAIMIRI 53-83 3′REGION (SUBGROUP C/STRAIN 488) PENV_MLVHO ENV POLYPROTEIN HOMULV MURINE LEUKEMIA 510-540 VIRUS PDPOL_HCMVA DNA POLYMERASE HUMAN CYTOMEGALO VIRUS 753-780 (STRAIN AD169) PIC18_HCMVA PROB PROC 7 TRANSPORT HUMAN CYTOMEGALO VIRUS 294-324 PRO UL56 (STRAIN AD169) PIR05_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 22-49 IRL5 (STRAIN AD169) PIR12_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS  74-162 IRL12 (STRAIN AD169) PIR13_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 31-62 IRL13 (STRAIN AD169) PRIR1_HCMVA RIBONUC-DIPHOSPH HUMAN CYTOMEGALO VIRUS 622-649 REDUCT LARGE CHA (STRAIN AD169) PTEGU_HCMVA PROBABLE LARGE HUMAN CYTOMEGALO VIRUS 1251-1281 2202-2229 TEGUMENT PROTEIN (STRAIN AD169) PUL08_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS  6-47 UL8 (STRAIN AD169) PUL13_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 347-374 UL13 (STRAIN AD169) PUL16_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS  81-112 UL16 (STRAIN AD169) PUL20_HCMVA HYPOTH PRO UL20 HUMAN CYTOMEGALO VIRUS 34-61 PRECURSOR (STRAIN AD169) PUL31_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 167-194 254-284 UL31 (STRAIN AD169) PUL35_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 535-562 UL35 (STRAIN AD169) PUL47_HCMVA PROTEIN UL47 HUMAN CYTOMEGALO VIRUS 114-148 448-485 763-790 802-853 (STRAIN AD169) PUL50_HCMVA PROTEIN UL50 HUMAN CYTOMEGALO VIRUS 159-186 (STRAIN AD169) PUL59_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS  74-101 UL59 (STRAIN AD169) PUL70_HCMVA PROB DNA REP PROTEIN UL70 HUMAN CYTOMEGALO VIRUS 65-92 (STRAIN AD169) PUL73_HCMVA UL73 GLYCOPROTEIN HUMAN CYTOMEGALO VIRUS  5-73 PRECURSOR (STRAIN AD169) PUL74_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 45-79 UL74 (STRAIN AD169) PUL93_HCMVA PROTEIN UL93 HUMAN CYTOMEGALO VIRUS 26-53 314-381 (STRAIN AD169) PUL95_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 37-71 UL95 (STRAIN AD169) PULA4_HCMVA VIRION PROTEIN UL104 HUMAN CYTOMEGALO VIRUS  4-31 443-477 (STRAIN AD169) PULB9_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 33-78 UL119 (STRAIN AD169) PULD0_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS  90-124 UL130 (STRAIN AD169) PUS09_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 20-47 HXLF3 (STRAIN AD169) PUS14_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 277-308 HVLF4 (STRAIN AD169) PUS18_HCMVA MEMBRANE PROTEIN HUMAN CYTOMEGALO VIRUS 191-218 HWLF5 (STRAIN AD169) PVGLB_HCMVA GLYCOPROTEIN B HUMAN CYTOMEGALO VIRUS 25-88 397-424 440-467 851-878 PRECURSOR (STRAIN AD169) PVGLH_HCMVA GLYCOPROTEIN H HUMAN CYTOMEGALO VIRUS 107-136 270-297 PRECURSOR (STRAIN AD169) PVGLI_HCMVA IE GLYCOPROTEIN HUMAN CYTOMEGALO VIRUS  47-111 PRECURSOR (STRAIN AD169) PVTER_HCMVA PROBABLE DNA HUMAN CYTOMEGALO VIRUS 417-451 PACKAGING PROTEIN (STRAIN AD169) PDNBI_HCMVA MAJOR DNA-BINDING HUMAN CYTOMEGALO VIRUS 437-464 PROTEIN (STRAIN AD169) PV30K_HCMVE 30 KD MAJOR EARLY HUMAN CYTOMEGALO VIRUS 194-221 PROTEIN (STRAIN EISENHARDT) PVGLB_HCMVT GLYCOPROTEIN B HUMAN CYTOMEGALO VIRUS 50-88 397-424 435-462 852-879 PRECURSOR (STRAIN TOWNE) PVGLH_HCMVT GLYCOPROTEIN H HUMAN CYTOMEGALO VIRUS 106-135 PRECURSOR (STRAIN TOWNE) PENV_HV1A2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 544-592 630-682 790-825 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PGAG_HV1A2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY  91-118 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PPOL_HV1A2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 218-245 620-661 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PVPU_HV1A2 VPU PROTEIN HUMAN IMMUNODEFICIENCY  3-31 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PVPU_HV1B1 VPU PROTEIN HUMAN IMMUNODEFICIENCY  5-48 VIRUS TYPE 1 (BH10 AND HXB3 ISOLATES) PENV_HV1B1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 631-683 791-818 VIRUS TYPE 1 (BH10 ISOLATE) PPOL_HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 230-257 637-673 VIRUS TYPE 1 (BH10 ISOLATE) PPOL_HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 230-257 632-673 VIRUS TYPE 1 (BH5 ISOLATE) PENV_HV1B8 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 540-589 626-678 786-813 VIRUS TYPE 1 (BH8 ISOLATE) PVPU_HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY 21-48 VIRUS TYPE 1 (BH8 ISOLATE) PENV_HV1BN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 267-294 338-365 562-590 628-679 787-815 VIRUS TYPE 1 (BRAIN ISOLATE) PVPU_HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY 22-49 VIRUS TYPE 1 (BRAIN ISOLATE) PENV_HV1BR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 550-599 636-688 796-823 VIRUS TYPE 1 (BRU ISOLATE) PPOL_HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 230-257 632-673 VIRUS TYPE 1 (BRU ISOLATE) PVPU_HV1BR VPU PROTEIN HUMAN IMMUNODEFICIENCY  5-48 VIRUS TYPE 1 (BRU ISOLATE) PENV_HV1C4 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 397-424 557-606 643-695 803-835 VIRUS TYPE 1 (CDC-451 ISOLATE) PVPU_HV1C4 VPU PROTEIN HUMAN IMMUNODEFICIENCY  3-30 VIRUS TYPE 1 (CDC-451 ISOLATE) PENV_HV1EL ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 255-296 386-413 543-591 628-680 VIRUS TYPE 1 (ELI ISOLATE) PNEF_HV1EL NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY  81-119 VIRUS TYPE 1 (ELI ISOLATE) PPOL_HVIEL POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 624-660 VIRUS TYPE 1 (ELI ISOLATE) PVPU_HV1EL VPU PROTEIN HUMAN IMMUNODEFICIENCY  6-33 VIRUS TYPE 1 (ELI ISOLATE) PENV_HV1H2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 631-683 791-818 VIRUS TYPE 1 (HXB2 ISOLATE) PPOL_HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 218-245 620-661 921-951 VIRUS TYPE 1 (HXB2 ISOLATE) PVPU_HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY  5-48 VIRUS TYPE 1 (HXB2 ISOLATE) PENV_HV1H3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 631-683 791-818 VIRUS TYPE 1 (HSB3 ISOLATE) PENV_HV1J3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 350-377 556-605 642-694 802-829 VIRUS TYPE 1 (JH3 ISOLATE) PGAG_HV1J3 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY  91-118 VIRUS TYPE 1 (JH3 ISOLATE) PVPU_HV1J3 VPU PROTEIN HUMAN IMMUNODEFICIENCY  2-29 VIRUS TYPE 1 (JH3 ISOLATE) PENV_HV1JR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 336-363 622-675 783-811 VIRUS TYPE 1 (JRCSF ISOLATE) PPOL_HV1JR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 222-249 624-665 VIRUS TYPE 1 (JRCSF ISOLATE) PVPU_HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCY 22-49 VIRUS TYPE 1 (JRCSF ISOLATE) PENV_HV1MA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 547-595 633-707 794-826 VIRUS TYPE 1 (MAL ISOLATE) PPOL_HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 476-510 619-660 VIRUS TYPE 1 (MAL ISOLATE) PVPU_HV1MA VPU PROTEIN HUMAN IMMUNODEFICIENCY 5-32 VIRUS TYPE 1 (MAL ISOLATE) PENV_HV1MF ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 543-592 629-681 789-816 VIRUS TYPE 1 (MFA ISOLATE) PENV_HV1MN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 343-370 567-595 632-684 791-819 VIRUS TYPE 1 (MN ISOLATE) PGAG_HV1MN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY  87-118 VIRUS TYPE 1 (MN ISOLATE) PPOL_HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 221-248 623-664 VIRUS TYPE 1 (MN ISOLATE) PENV_HV1ND ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 249-290 536-583 621-673 783-813 VIRUS TYPE 1 (NDK ISOLATE) PNEF_HV1ND NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY  81-119 VIRUS TYPE 1 (NDK ISOLATE) PPOL_HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 624-660 VIRUS TYPE 1 (NDK ISOLATE) PVPU_HV1ND VPU PROTEIN HUMAN IMMUNODEFICIENCY  6-33 VIRUS TYPE 1 (NDK ISOLATE) PENV_HV1N5 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 326-360 VIRUS TYPE 1 (NEW YORK-5 ISOLATE PPOL_HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 218-245 625-661 VIRUS TYPE 1 (NEW YORK-5 ISOLATE PENV_HV1OY ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 544-593 630-704 789-820 VIRUS TYPE 1 (OY1 ISOLATE) PPOL_HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 218-245 620-661 VIRUS TYPE 1 (OY1 ISOLATE) PENV_HV1PV ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 631-683 791-818 VIRUS TYPE 1 (PV22 ISOLATE) PPOL_HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 230-257 637-673 VIRUS TYPE 1 (PV22 ISOLATE) PVPU_HV1PV VPU PROTEIN HUMAN IMMUNODEFICIENCY 5-48 VIRUS TYPE 1 (PV22 ISOLATE) PENV_HV1RH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 280-307 351-378 554-602 640-692 800-832 VIRUS TYPE 1 (RF/HAT ISOLATE) PPOL_HV1RH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 619-660 VIRUS TYPE 1 (RF/HAT ISOLATE) VIF_HV1RH VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY 62-89 VIRUS TYPE 1 (RF/HAT ISOLATE) PENV_HV1SC ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 338-365 545-593 631-683 VIRUS TYPE 1 (SC ISOLATE) PENV_HV1S1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 333-363 536-585 622-674 782-809 VIRUS TYPE 1 (SF162 ISOLATE) PVPU_HV1S1 VPU PROTEIN HUMAN IMMUNODEFICIENCY 22-49 VIRUS TYPE 1 (SF162 ISOLATE) PENV_HV1S3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 541-589 627-679 787-815 VIRUS TYPE 1 (SF33 ISOLATE) PENV_HV1KB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 274-301 555-596 637-677 776-824 VIRUS TYPE 1 (STRAIN KB-1-GP32) PPOL_HVIU4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 513-540 619-660 VIRUS TYPE 1 (STRAIN UGANDAN/ISOLATE U) PENV_HV1W1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 338-365 545-593 631-683 791-818 VIRUS TYPE 1 (WMJ1 ISOLATE) PENV_HV1W2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 334-361 536-584 622-674 782-809 VIRUS TYPE 1 (WMJ2 ISOLATE) PENV_HV1Z8 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 266-307 573-601 634-678 797-828 VIRUS TYPE 1 (Z-84 ISOLATE) PENV_HV1Z2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 255-296 542-591 628-680 790-820 VIRUS TYPE 1 (Z2/CDC-Z34 ISOLATE) PPOL_HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 619-660 VIRUS TYPE 1 (Z2/CDC-Z34 ISOLATE) PENV_HV1Z3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 251-292 VIRUS TYPE 1 (ZAIRE 3 ISOLATE) PENV_HV1Z6 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 256-297 545-593 630-682 792-822 VIRUS TYPE 1 (ZAIRE 6 ISOLATE) PNEF_HV1Z6 NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY  86-124 VIRUS TYPE 1 (ZAIRE 6 ISOLATE) PENV_HZ1ZH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 627-666 791-823 VIRUS TYPE 1 (ZAIRE HZ321 ISOLATE) PENV_HV2BE ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 61-88 532-591 621-648 653-697 VIRUS TYPE 2 (ISOLATE BEN) PGAG_HV2BE GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY  88-115 VIRUS TYPE 2 (ISOLATE BEN) PPOL_HV2BE POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 491-582 VIRUS TYPE 2 (ISOLATE BEN) PENV_HV2CA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 534-593 623-650 655-699 VIRUS TYPE 2 (ISOLATE CAM2) PPOL_HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 471-562 VIRUS TYPE 2 (ISOLATE CAM2) PENV_HV2D1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 61-88 523-550 555-582 644-688 VIRUS TYPE 2 (ISOLATE D194) PGAG_HV2D1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY  88-115 VIRUS TYPE 2 (ISOLATE D194) PPOL_HV2D1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 509-600 VIRUS TYPE 2 (ISOLATE D194) PPOL_HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 491-568 VIRUS TYPE 2 (ISOLATE D205,7) PENV_HV2G1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 60-87 524-551 556-583 613-640 645-693 VIRUS TYPE 2 (ISOLATE GHANA-1) PPOL_HV2G1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 471-562 VIRUS TYPE 2 (ISOLATE GHANA-1) PENV_HV2NZ ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 61-88 524-551 556-583 613-640 662-689 VIRUS TYPE 2 (ISOLATE NIH-Z) PGAG_HV2NZ GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY  88-115 VIRUS TYPE 2 (ISOLATE NIH-Z) PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 471-529 VIRUS TYPE 2 (ISOLATE NIH-Z) PENV_HV2RO ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 58-85 533-592 622-698 VIRUS TYPE 2 (ISOLATE ROD) PPOL_HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 472-563 VIRUS TYPE 2 (ISOLATE ROD) PENV_HV2SB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 557-584 614-673 VIRUS TYPE 2 (ISOLATE SBLISY) PPOL_HV2SB POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 473-562 VIRUS TYPE 2 (ISOLATE SBLISY) PENV_HV2ST ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 442-476 527-554 559-586 648-692 VIRUS TYPE 2 (ISOLATE ST) PGAG_HV2ST GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 88-115 VIRUS TYPE 2 (ISOLATE ST) PPOL_HV2ST POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 491-582 VIRUS TYPE 2 (ISOLATE ST) PENV_HV2S2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 442-476 527-554 559-586 648-682 VIRUS TYPE 2 (ISOLATE ST/24 1C#2) PVE4_HPV11 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS  81-108 TYPE 11 PVE5A_HPV11 PROBABLE E5A PROTEIN HUMAN PAPILLOMA VIRUS 30-60 TYPE 11 PVE2_HPV13 E2 PROTEIN HUMAN PAPILLOMA VIRUS 157-184 334-361 TYPE 13 PVE2_HPV16 E2 PROTEIN HUMAN PAPILLOMA VIRUS  61-105 312-342 TYPE 16 PVE4_PPV16 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 66-93 TYPE 16 PVE1_HPV18 E1 PROTEIN HUMAN PAPILLOMA VIRUS 60-87 TYPE 18 PVE2_HPV18 E2 PROTEIN HUMAN PAPILLOMA VIRUS 313-340 TYPE 18 PVE4_HPV18 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 59-86 TYPE 18 PVE6_HPV18 E6 PROTEIN HUMAN PAPILLOMA VIRUS  75-102 TYPE 18 VL1_HPV18 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 183-210 TYPE 18 PVE2_HPV1A E2 PROTEIN HUMAN PAPILLOMA VIRUS 159-186 TYPE 1A VL2_HPV1A PROBABLE L2 PROTEIN HUMAN PAPILLOMA VIRUS 407-445 TYPE 1A PVE1_HPV2A E1 PROTEIN HUMAN PAPILLOMA VIRUS 21-48 TYPE 2A PVE2_HPV2A E2 PROTEIN HUMAN PAPILLOMA VIRUS 159-193 TYPE 2A PVE4_HPV31 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS  75-102 TYPE 31 PVE6_HPV31 E6 PROTEIN HUMAN PAPILLOMA VIRUS 69-96 TYPE 31 PVE1_HPV33 E1 PROTEIN HUMAN PAPILLOMA VIRUS 180-207 TYPE 33 PVE2_HPV33 E2 PROTEIN HUMAN PAPILLOMA VIRUS 304-331 TYPE 33 VL1_HPV33 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 19-46 TYPE 33 PVE2_HPV35 E2 PROTEIN HUMAN PAPILLOMA VIRUS 158-192 327-354 TYPE 35 PVE5_HPV35 PROBABLE E5 PROTEIN HUMAN PAPILLOMA VIRUS 27-54 TYPE 35 PVE1_HPV39 E1 PROTEIN HUMAN PAPILLOMA VIRUS 103-130 TYPE 39 PVE2_HPV39 E2 PROTEIN HUMAN PAPILLOMA VIRUS  7-34 323-357 TYPE 39 PVE6_HPV39 E6 PROTEIN HUMAN PAPILLOMA VIRUS  71-102 TYPE 39 PVE1_HPV41 E1 PROTEIN HUMAN PAPILLOMA VIRUS 55-89 TYPE 41 PVE4_HPV41 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 63-97 TYPE 41 PVE6_HPV41 E6 PROTEIN HUMAN PAPILLOMA VIRUS 119-146 TYPE 41 VL1_HPV41 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 345-372 TYPE 41 VL2_HPV41 PROBABLE L2 PROTEIN HUMAN PAPILLOMA VIRUS 415-442 TYPE 41 PVE1_HPV42 E1 PROTEIN HUMAN PAPILLOMA VIRUS 25-59 TYPE 42 PVE6_HPV45 E6 PROTEIN HUMAN PAPILLOMA VIRUS  75-102 TYPE 45 PVE1_HPV47 E1 PROTEIN HUMAN PAPILLOMA VIRUS 146-173 TYPE 47 PVE2_HPV47 E2 PROTEIN HUMAN PAPILLOMA VIRUS 17-51 148-175 276-303 TYPE 47 PVE2_HPV05 PROBABLE E2 PROTEIN HUMAN PAPILLOMA VIRUS 17-51 TYPE 5 PVE4_HPV05 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 202-229 TYPE 5 PVE2_HPV51 E2 PROTEIN HUMAN PAPILLOMA VIRUS 137-284 TYPE 51 PVE6_HPV51 E6 PROTEIN HUMAN PAPILLOMA VIRUS 72-99 TYPE 51 VL1_HPV51 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 19-46 TYPE 51 PVE1_HPV57 E1 PROTEIN HUMAN PAPILLOMA VIRUS 21-48 TYPE 57 PVE2_HPV57 E2 PROTEIN HUMAN PAPILLOMA VIRUS 166-193 TYPE 57 PVE2_HPV58 E2 PROTEIN HUMAN PAPILLOMA VIRUS  2-36 309-336 TYPE 58 VL1_HPV58 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 45-72 TYPE 58 PVE2_HPV5B PROBABLE E2 PROTEIN HUMAN PAPILLOMA VIRUS 17-51 TYPE 5B PVE4_HPV5B PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 202-229 TYPE 5B PVE5_HPV5B PROBABLE E5 PROTEIN HUMAN PAPILLOMA VIRUS 11-41 TYPE 5B PVE5A_HPV6B PROBABLE E5A PROTEIN HUMAN PAPILLOMA VIRUS 30-60 TYPE 6B PVE5A_HPV6C PROBABLE E5A PROTEIN HUMAN PAPILLOMA VIRUS 30-60 TYPE 6C VL1_HPV08 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 354-392 TYPE 8 PVE6_HPVME E6 PROTEIN HUMAN PAPILLOMA VIRUS  71-102 TYPE ME180 PRRPP_PI1HB RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1  84-111 234-261 375-416 SUBUNIT VIRUS (STRAIN C35) PNCAP_PI1HC NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 377-404 455-482 VIRUS (STRAIN C39) PRRPP_PI1HC RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1  84-111 234-261 375-416 SUBUNIT VIRUS (STRAIN C39) PVGLF_PI1HC FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 1 147-174 210-266 PRECURSOR VIRUS (STRAIN C39) PRRPP_PI1HE RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1  84-111 244-271 375-416 SUBUNIT VIRUS (STRAIN CI-14/83) PVNSC_PI1HE NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 41-75 VIRUS (STRAIN CI-14/83) PRRPP_PI1HD RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1  84-111 232-262 375-416 SUBUNIT VIRUS (STRAIN CI-5/73) PHEMA_PI1HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 1  79-110 366-393 NEURAMINIDASE VIRUS (STRAIN WASHINGTON/ 1957) PNCAP_PI1HW NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 377-404 444-488 VIRUS (STRAIN WASHINGTON/ 1957) PRRPP_PI2H RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 167-194 222-256 SUBUNIT VIRUS PVGLF_PI2H FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2  90-117 141-175 238-266 483-528 PRECURSOR VIRUS PVGLF_PI2HG FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2  90-117 114-175 238-266 483-528 PRECURSOR VIRUS (STRAIN GREER) PRRPL_P12HT RNA POLYMERASE BETA HUMAN PARAINFLUENZA 2 322-349 1564-1598 1687-1721 1901-1946 SUBUNIT VIRUS (STRAIN TOSHIBA) PRRPP_PI2HT RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 167-194 222-256 SUBUNIT VIRUS (STRAIN TOSHIBA) PVGLF_PI2HT FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2  90-117 141-175 238-266 483-528 PRECURSOR VIRUS (STRAIN TOSHIBA) PVMAT_PI2HT MATRIX PROTEIN HUMAN PARAINFLUENZA 2  96-123 VIRUS (STRAIN TOSHIBA) PHEMA_PI3HA HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDASE VIRUS (STRAIN AUS/124854/74) PNCAP_PI3H4 NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 3 376-403 VIRUS (STRAIN NIH 47885) PHEMA_PI3H4 HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDASE VIRUS (STRAIN NIH 47885) PRRPL_PI3H4 RNA POLYMERASE BETA HUMAN PARAINFLUENZA 3 52-86 136-163 608-638 1081-1123 1994-2036 2115-2142 SUBUNIT VIRUS (STRAIN NIH 47885) PRRRP_PI3H4 RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 3 114-144 269-299 SUBUNIT VIRUS (STRAIN NIH 47885) PVGLF_PI3H4 FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 3 115-182 207-241 457-497 PRECURSOR VIRUS (STRAIN NIH 47885) PVMAT_PI3H4 MATRIX PROTEIN HUMAN PARAINFLUENZA 3 201-231 VIRUS (STRAIN NIH 47885) PVNSC_PI3H4 NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 3 58-99 VIRUS (STRAIN NIH 47885) PHEMA_PI3HV HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDASE VIRUS (STRAIN TEX/12677/83) PHEMA_PI3HT HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-76 NEURAMINIDASE VIRUS (STRAIN TEX/545/80) PHEMA_PI3HU HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 23-70 NEURAMINIDASE VIRUS (STRAIN TEX/9305/82) PHEMA_PI3HX HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDASE VIRUS (STRAIN WASH/1511/73) PHEMA_PI3HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDASE VIRUS (STRAIN WASH/641/79) PRRPP_PI4HA RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 4A  4-38 SUBUNIT VIRUS (STRAIN TOSHIBA) PVV_PI4HA V PROTEIN HUMAN PARAINFLUENZA 4A  4-38 VIRUS (STRAIN TOSHIBA) PRRPP_HRSV RNA POLYMERASE ALPHA HUMAN RESPIRATORY  99-141 SUBUNIT SYNCYTIAL VIRUS PNCAP_HRSVA NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY  4-31 SYNCYTIAL VIRUS (STRAIN A2) PRRPL_HRSVA RNA POLYMERASE BETA HUMAN RESPIRATORY 103-192 210-237 667-694 788-815 1007-1034 1138-1165 1453-1480 1776-1803 2062-2089 SUBUNIT SYNCYTIAL VIRUS (STRAIN A2) PRRPP_HRSVA RNA POLYMERASE ALPHA HUMAN RESPIRATORY  99-141 SUBUNIT SYNCYTIAL VIRUS (STRAIN A2) PVGLF_HRSVA FUSION GLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-202 213-243 488-518 PRECURSOR SYNCYTIAL VIRUS (STRAIN A2) PVMA2_HRSVA MATRIX GLYCOPROTEIN M2 HUMAN RESPIRATORY 124-151 SYNCYTIAL VIRUS (STRAIN A2) PVMAT_HRSVA MATRIX PROTEIN HUMAN RESPIRATORY 219-246 SYNCYTIAL VIRUS (STRAIN A2) PVGLG_HRSV4 MAJOR SURFACE HUMAN RESPIRATORY  66-107 GLYCOPROTEIN G SYNCYTIAL VIRUS (STRAIN RSB5857) PVGLG_HRSV5 MAJOR SURFACE HUMAN RESPIRATORY 243-273 GLYCOPROTEIN G SYNCYTIAL VIRUS (STRAIN RSB6190) PVGLF_HRSVR FUSION GLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-202 213-243 442-471 488-518 PRECURSOR VIRUS (STRAIN RSS-2) PRRPP_HRSVL RNA POLYMERASE ALPHA HUMAN RESPIRATORY  99-141 SUBUNIT SYNCYTIAL VIRUS (SUBGROUP A/STRAIN LONG) PVGLF_HRSVL FUSION GLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-202 216-243 444-471 488-515 PRECURSOR SYNYTIAL VIRUS (SUBGROUP A/STRAIN LONG) PNCAP_HRSV1 NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY  4-31  74-108 112-141 SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 18537) PRRPP_HRSV1 RNA POLYMERASE ALPHA HUMAN RESPIRATORY  99-141 SUBUNIT SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 18537) PVGLF_HRSV1 FUSION GLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-203 442-471 488-515 PRECURSOR SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 18537) PVGLG_HRSV1 MAJOR SURFACE HUMAN RESPIRATORY 63-93 GLYCOPROTEIN G SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 18537) PVGLG_HRSV8 MAJOR SURFACE HUMAN RESPIRATORY 66-93 GLYCOPROTEIN G SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 8/60) PENV_HTL1C ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA 342-376 VIRUS TYPE 1 (CARIBBEAN ISOLATE) PPOL_HTL1C POL POLYPROTEIN HUMAN T-CELL LEUKEIMA 674-712 VIRUS TYPE I (CARIBBEAN ISOLATE) PENV_HTLIM ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA 342-376 VIRUS TYPE 1 (ISOLATE MT-2) PENV_HTL1A ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA 342-376 VIRUS TYPE 1 (STRAIN ATK) PPOL_HTL1A POL POLYPROTEIN HUMAN T-CELL LEUKEMIA 674-712 VIRUS TYPE 1 (STRAIN ATK) PENV_HTLV2 ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA 336-370 VIRUS TYPE II PDPOL_HSVI1 DNA POLYMERASE ICTALURID HERPES VIRUS 1 328-366 710-737 PKR74_HSVI1 GENE 74 PROTEIN KINASE ICTALURID HERPES VIRUS 1 491-518 PVG07_HSVI1 HYPOTH GENE 7 MEMB PRO ICTALURID HERPES VIRUS 1 71-98 PVG17_HSVI1 HYPOTHETICAL GENE 17 ICTALURID HERPES VIRUS 1 177-204 PROTEIN PVG18_HSVI1 HYPOTHETICAL GENE 18 ICTALURID HERPES VIRUS 1 174-208 PROTEIN PVG22_HSVI1 HYPOTHETICAL GENE 22 ICTALURID HERPES VIRUS 1 373-400 581-622 668-705 766-824 PROTEIN PVG24_HSVI1 HYPOTHETICAL GENE 24 ICTALURID HERPES VIRUS 1 31-58 PROTEIN PVG28_HSVI1 HYPOTHETICAL GENE 28 ICTALURID HERPES VIRUS 1 253-290 497-528 PROTEIN PVG34_HSVI1 HYPOTHETICAL GENE 34 ICTALURID HERPES VIRUS 1  95-122 PROTEIN PVG37_HSVI1 HYPOTHETICAL GENE 37 ICTALURID HERPES VIRUS 1 442-469 PROTEIN PVG39_HSVI1 HYPOTHETICAL GENE 39 ICTALURID HERPES VIRUS 1 651-678 1088-1115 PROTEIN PVG46_HSVI1 PROBABLE MAJOR ICTALURID HERPES VIRUS 1 142-169 346-373 897-924  973-1007 GLYCOPROTEIN PVG51_HSVI1 HYPOTH GENE 51 ICTALURID HERPES VIRUS 1 34-61  87-114 MEMBRANE PROTEIN PVG56_HSVI1 HYPOTHETICAL GENE 56 ICTALURID HERPES VIRUS 1 582-609 PROTEIN PVG63_HSVI1 HYPOTHETICAL GENE 63 ICTALURID HERPES VIRUS 1 550-584 PROTEIN PVG64_HSVI1 HYPOTHETICAL GENE 64 ICTALURID HERPES VIRUS 1 477-504 PROTEIN PVG65_HSVI1 HYPOTHETICAL GENE 65 ICTALURID HERPES VIRUS 1 1213-1254 PROTEIN PVG66_HSVI1 HYPOTHETICAL GENE 66 ICTALURID HERPES VIRUS 1 362-406 PROTEIN PVG67_HSVI1 HYPOTHETICAL GENE 67 ICTALURID HERPES VIRUS 1 1342-1369 PROTEIN PVG68_HSVI1 HYPOTHETICAL GENE 68 ICTALURID HERPES VIRUS 1 261-288 PROTEIN PVG72_HSVI1 HYPOTHETICAL GENE 72 ICTALURID HERPES VIRUS 1 447-481 PROTEIN PVG75_HSVI1 HYPOTHETICAL GENE 75 ICTALURID HERPES VIRUS 1 388-422 PROTEIN PVG76_HSVI1 HYPOTHETICAL GENE 76 ICTALURID HERPES VIRUS 1 200-227 PROTEIN PVTER_HSVI1 PROBABLE DNA ICTALURID HERPES VIRUS 1 710-737 PACKAGING PROTEIN PHEMA_IAHSW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN) 29-56 194-221 388-457 A/EQUINE/SWITZERLAND/137/72 PHEMA_IAAIC HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 AICHI/2/68) PVNS1_IAALA NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 ALASKA/6/77) PVNUC_IAANA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 ANAS ACUTA/PRIMORJE/695/76) PRRP2_IAANN RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 ANN ARBOR/6/60) PVNS1_IAANN NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 ANN ARBOR/6/60) PVNUC_IAANN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 ANN ARBOR/6/60) PHEMA_IABAN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 24-51 371-437 BANGKOK/1/79) PNRAM_IABDA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 47-81 BLACK DUCK/AUSTRALIA/ 702/78) PVNUC_IABRA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 BRAZIL/11/78) PHEMA_IABUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 BUDGERIGAR/HOKKAIDO/1/77) PRRP3_IABUD RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 537-567 SUB P3 BUDGERIGAR/HOKKAIDO/1/77) PVNUC_IABUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 BUDGERIGAR/HOKKAIDO/1/77) PVNUC_IACAL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 CALIFORNIA/10/78) PNRAM_IACAO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 33-64 CAMEL/MONGOLIA/82 PHEMA_IACAO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN A/  9-36 CAMEL/MONGOLIA/82) PHEMA_IACKA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 CHICKEN/ALABAMA/1/75) PHEMA_IACKG HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 31-58 382-441 494-528 CHICKEN/GERMANY/N/49) PVNS1_IACKG NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 CHICKEN/GERMANY/N/49) PVNUC_IACKG NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 CHICKEN/GERMANY/N/49) PVNS1_IACKJ NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 168-195 NS1 CHICKEN/JAPAN/24) PHEMA_IACKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 396-426 CHICKEN/PENNSYLVANIA/1/83) PVNUC_IACKP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 CHICKEN/PENNSYLVANIA/1/83) PHEMA_IACKQ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 396-426 CHICKEN/PENNSYLVANIA/1370/ 83) PHEMA_IACKV HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 119-146 384-443 CHICKEN/VICTORIA/1/85) PNRAM_IACHI NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 50-91 CHILE/1/83) PRRP3_IACHI RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 331-358 SUB P3 CHILE/1/83) PVNS1_IACHI NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 CHILE/1/83) PHEMA_IADA1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 DUCK/ALBERTA/28/76) PNRAM_IADA1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 51-81 DUCK/ALBERTA/28/76) PHEMA_IADA4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 418-478 DUCK/ALBERTA/35/76) PHEMA_IADA2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 423-453 499-543 DUCK/ALBERTA/60/76) PVNS1_IADA2 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 DUCK/ALBERTA/60/76) PHEMA_IADA3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 DUCK/ALBERTA/78/76) PVNUC_IADAU NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/AUSTRALIA/749/80) PVNUC_IADBE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/BEIJING/1/78) PHEMA_IADCZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 DUCK/CZECHOSLOVAKIA/56) PVNUC_IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/CZECHOSLOVAKIA/56) PVNUC_IADE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/ENGLAND/1/) PHEMA_IADE1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55 402-453 506-533 DUCK/ENGLAND/1/56) PVNUC_IADE2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/ENGLAND/1/62) PNRAM_IADGE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 21-48 DUCK/GERMANY/49) PHEMA_IADH7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/10/85) PHEMA_IADH5 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/21/82) PHEMA_IADH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/33/80) PHEMA_IADH1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/5/77) PHEMA_IADH4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/7/82) PHEMA_IADH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/8/80) PRRP2_IADH2 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 DUCK/HOKKAIDO/8/80) PHEMA_IADH6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/9/85) PVNUC_IADHK NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/HONG KONG/7/75) PHEMA_IADIR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 415-445 DUCK/IRELAND/113/83) PHEMA_IADMA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 31-58 DUCK/MANITOBA/1/53) PVNUC_IADMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/MANITOBA/1/53) PHEMA_IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-56 DUCK/MEMPHIS/546/76) PHEMA/IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 DUCK/MEMPHIS/928/74) PVNUC_IADM2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/MEMPHIS/928/74) PHEMA_IADNY HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55 DUCK/NEW YORK/12/78) PHEMA_IADNZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-453 DUCK/NEW ZEALAND/31/76) PVNUC_IADNZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/NEW ZEALAND/31/76) PHEMA_IADU1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55 DUCK/UKRAINE/1/60) PHEMA_IADU3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 DUCK/UKRAINE/1/63) PVNUC_IADU2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/UKRAINE/2/60) PVNUC_IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 ENGLAND/19/55) PHEMA_IAEN7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67 387-453 ENGLAND/321/77) PHEMA_IAEN6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 24-51 ENGLAND/878/69) PHEMA_IAHAL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/ALGIERS/72) PHEMA_IAHCD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/C.DETROIT/1/64) PHEMA_IAHC6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/CAMBRIDGE/1/63) PHEMA_IAHC7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/CAMBRIDGE/1/73) PNRAM_IAHCO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 197-224 386-413 EQUINE/COR/16/74) PHEMA_IAHDE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/DETROIT/1/64) PHEMA_IAHFO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/FONTAINEBLEAU/76) PVNUC_IAHJI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 EQUINE/JILLIN/1/89) PNRAM_IAHK1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/  5-44 46-76 364-400 EQUINE/KENTUCKY/1/81) PHEMA_IAHK7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/KENTUCKY/1/87) PHEMA_IAHK6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/KENTUCKY/2/86) PHEMA_IAHLE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/LEXINGTON/1/66) PHEMA_IAHLO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/LONDON/1416/73) PRRP2_IAHLO RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 EQUINE/LONDON/1416/73) PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 LONDON/1416/73) PHEMA_IAHMI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/MIAMI/1/63) PVNUC_IAHMI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 EQUINE/MIAMI/1/63) PHEMA_IAHNN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/NEW MARKET/1/77) PHEMA_IAHNM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/NEW MARKET/76) PHEMA_IAHPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/PRAGUE/1/56) PRRP3_IAHPR RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 331-361 480-507 SUB P3 EQUINE/PRAGUE/1/56) PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 EQUINE/PRAGUE/1/56) PHEMA_IAHRO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/ROMANIA/80) PHEMA_IAHSA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/SANTIAGO/1/85) PHEMA_IAHSP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/SAO PAULO/1/76) PHEMA_IAHTE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/TENNESSEE/5/86) PRRP2_IAHTE RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 EQUINE/TENNESSEE/5/86) PVNUC_IAHTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 EQUINE/TENNESSEE/5/86) PHEMA_IAHTO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-455 EQUINE/TOKYO/71) PHEMA_IAHUR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/URUGUAY/1/63) PVNS1_IAFOM NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 FORT MONMOUTH/1/47) PVNUC_IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FORT MONMOUTH/1/47) PVNS1_IAFOW NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 FORT WARREN/1/50) PVNUC_IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FORT WARREN/1/50) PVNUC_IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FOWL PLAGUE VIRUS/DOBSON/ ‘DUTCH’/27) PHEMA_IAFPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 177-221 384-442 FOWL PLAGUE VIRUS/ ROSTOCK/34) PRRP2_IAFPR RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 FOWL PLAGUE VIRUS/ ROSTOCK/34) PVNUC_IAFPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FOWL PLAGUE VIRUS/ ROSTOCK/34) PNRAM_IAFPW NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 10-48 52-80 197-224 FOWL PLAGUE VIRUS/ WEYBRIDGE) PHEMA_IAGRE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 GREY TEAL/AUSTRALIA/2/79) PVNUC_IAURE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GREY TEAL/AUSTRALIA/2/79) PHEMA_IAGUA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 504-531 GULL/ASTRAKHAN/227/84) PVNUC_IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/ASTRAKHAN/227/84) PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MARYLAND/1815/79) PVNUC_IAGU3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MARYLAND/1824/78) PVNUC_IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MARYLAND/5/77) PHEMA_IAGU2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 505-532 GULL/MARYLAND/704/77) PRRP2_IAGU2 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 GULL/MARYLAND/704/77) PVNUC_IAGU2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MARYLAND/704/77) PVNUC_IAGUM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MASSACHUSETTS/26/80) PVNUC_IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MINNESOTA/945/80) PHEMA_IAHAR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 HARBIN/1/88) PVNUC_IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 HICKOX/40) PVNUC_IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 HONG KONG/1/68) PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 HONG KONG/5/83) PHEMA_IAJAP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 196-223 JAPAN/305/57) PHEMA_IAKIE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 425-478 KIEV/59/79) PNRAM_IAKIE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-81 KIEV/59/79) PVNUC_IAKIE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 KIEV/59/79) PRRP1_IAKOR RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 575-602 SUB P1 KOREA/426/68) PRRP2_IAKOR RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 KOREA/426/68) PRRP2_IALE2 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 LENINGRAD/134/17/57) PRRP2_IALE1 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 LENINGRAD/134/57) PVNS1_IALE1 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 LENINGRAD/134/57) PHEMA_IALEN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 425-478 LENINGRAD/54/1) PNRAM_IALEN NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-81 LENINGRAD/54/1) PVNUC_IALEN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 LENINGRAD/54/1) PVNS1_IAMA6 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 MALLARD/ALBERTA/88/76) PHEMA_IAMAA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 380-450 MALLARD/ASTRAKHAN/244/82) PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 MALLARD/ASTRAKHAN/244/82) PHEMA_IAMAB HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 385-455 MALLARD/ASTRAKHAN/263/82) PRRP2_IAMAN RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 MALLARD/NEW YORK/6750/78) PVNUC_IAMAN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 MALLARD/NEW YORK/6750/78) PHEMA_IAMAO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 MALLARD/NEW YORK/6874/78) PHEMA_IAME1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67 387-453 MEMPHIS/1/71) PNRMA_IAME1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 50-81 MEMPHIS/1/71H-A/BELLAMY/ 42N) PHEMA_IAME2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67 387-453 MEMPHIS/102/72) PHEMA_IAME6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 24-51 371-437 MEMPHIS/6/86) PHEMA_IAMIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 31-58 382-441 MINK/SWEDEN/84) PVNUC_IAMIN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 MINK/SWEDEN/84) PVNUC_IANEJ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 NEW JERSEY/8/76) PHEMA_IANT6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 NT/60/68) PRRP2_IANT6 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 NT/60/68) PVNUC_IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 NT/60/68) PVNUC_IAOHI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 OHIO/4/83) PNRAM_IAPAR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 50-81 PARROT/ULSTER/73) PVNUC_IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 PARROT/ULSTER/73) PHEMA_IAPIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 505-534 PILOT WHALE/MAINE/328/84 PRRP2_IAP10 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 PINTAIL/ALBERTA/119/79) PVNS1_IAPI1 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 PINTAIL/ALBERTA/121/79) PVNS1_IAPI3 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 PINTAIL/ALBERTA/358/79) PHEMA_IAPUE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 425-478 PUERTO RICO/8/34) PNRAM_IAPUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 PUERTO RICO/8/34) PRRP2_IAPUE RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 PUERTO RICO/8/34) PVNUC_IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 PUERTO RICO/8/34) PHEMA_IAQU7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 24-51 QU/7/70) PHEMA_IARUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 RUDDY TURNSTONE/NEW JERSEY/47/85) PRRP2_IARUD RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 RUDDY TURNSTONE/NEW JERSEY/47/85) PVNUC_IARUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 RUDDY TURNSTONE/NEW JERSEY/47/85) PNRAM_IARUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-88 RUDDY TURNSTONE/NEW JERSEY/60/85) PVNUC_IASE0 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SEAL/MASSACHUSETTS/1/80) PHEMA_IASE2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 SEAL/MASSACHUSETTS/133/82) PHEMA_IASH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 28-56 160-187 506-547 SHEARWATER/AUSTRALIA/72) PVNUC_IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SHEARWATER/AUSTRALIA/72) PRRP2_IASIN RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 SINGAPORE/1/57) PVNUC_IASIN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SINGAPORE/1/57) PHEMA_IASTA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 119-146 384-443 STARLING/VICTORIA/5156/85) PVNUC_IAZ29 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/29/37) PVNUC_IAZ41 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/41/49) PVNUC_IAZCA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/CAMBRIDGE/1/35) PHEMA_IAZCO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67 387-453 SWINE/COLORADO/1/77) PVNUC_IAZDA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/DANDONG/9/83) PVNUC_IAZGE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/GERMANY/2/81) PHEMA_IAZH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 SWINE/HONG KONG/126/82) PRRP2_IAZH3 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 SWINE/HONG KONG/126/82) PVNUC_IAZH3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/HONG KONG/126/82) PVNUC_IAZH4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/HONG KONG/127/82) PVNUC_IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/HONG KONG/6/76) PHEMA_IAZH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 SWINE/HONG KONG/81/78) PRRP2_IAZH2 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 SWINE/HONG KONG/81/78) PHEMA_IAZIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 418-478 506-547 SWINE/INDIANA/1726/88) PRRP2_IAZI1 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 SWINE/IOWA/15/30) PVNUC_IAZI1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/IOWA/15/30) PVNUC_IAZI2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/IOWA/1976/31) PVNUC_IAZI3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/IOWA/46) PVNUC_IAZJ3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ITALY/141/81) PVNUC_IAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ITALY/2/79) PVNUC_IAZJ1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ITALY/437/76) PVNUC_IAZJ4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ITALY/839/89) PVNUC_IAZJA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/JAMESBURG/42) PVNUC_IAZMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/MAY/54) PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/NETHERLANDS/12/85) PHEMA_IAZNJ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 418-478 506-547 SWINE/NEW JERSEY/11/76) PVNUC_IAZOH NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/OHIO/23/35) PVNUC_IAZON NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ONTARIO/2/81) PRRP3_IAZTE RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 487-514 SUB P3 SWINE/TENNESSEE/24/77) PVNUC_IAZTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WINE/TENNESSEE/24/77) PRRP2_IAZTF RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 SWINE/TENNESSEE/26/77) PHEMA_IAZUK HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 SWINE/UKKEL/1/84) PVNUC_IAZW1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/WISCONSIN/1/57) PVNUC_IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/WISCONSIN/1/61) PHEMA_IATAI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 TAIWAN/1/86) PVNUC_IATEI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TEAL/ICELAND/29/80) PHEMA_IATRA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55 TERN/AUSTRALIA/G70C/75) PNRAM_IATRA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-82 TERN/AUSTRALIA/G70C/75) PVNUC_IATRS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TERN/SOUTH AFRICA/61) PVNS1_IATRT NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 TERN/TURKMENIA/18/72) PVNUC_IATRT NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TERN/TURKMENIA/18/72) PVNUC_IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TEXAS/1/77) PVNS1_IATKB NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 TURKEY/BETHLEHEM/GLILIT/ 1492-B/82) PVNS1_IATKC NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 TURKEY/CANADA/63) PHEMA_IATKI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 415-445 TURKEY/IRELAND/1378/83) PVNUC_IATKN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TURKEY/MINNESOTA/1661/81) PHEMA_IATKM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 TURKEY/MINNESOTA/833/80) PRRP2_IATKM RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 TURKEY/MINNESOTA/833/80) PHEMA_IATKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 424-454 493-539 TURKEY/ONTARIO/6118/68) PHEMA_IATKO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 507-534 TURKEY/ONTARIO/7732/66) PVNUC_IATKO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TURKEY/ONTARIO/7732/66) PHEMA_IATKR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 32-62 194-221 381-422 TURKEY/OREGON/71) PVNS2_IATKR NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 87-114 NS2 TURKEY/OREGON/71) PHEMA_IATKW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 419-449 500-536 TURKEY/WISCONSIN/1/66) PHEMA_IAUDO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67 387-453 UDORN/307/72) PVNS1_IAUDO NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 UDORN/307/72) PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 UDORN/307/72) PHEMA_IAUSS HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 425-478 USSR/90/77) PNRAM_IAUSS NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-81 A/USSR/90/77) PVNS1_IAUSS NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 USSR/90/77) PVNUC_IAUSS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 USSR/90/77) PHEMA_IAVI7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 41-68 388-454 VICTORIA/3/75) PRRP2_IAVI7 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 327-354 SUB P2 VICTORIA/3/75) PVNUC_IAVI6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 VICTORIA/5/68) PNRAM_IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-88 WHALE/MAINE/1/84) PVNUC_IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WHALE/MAINE/328/84) PVNUC_IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WHALE/PACIFIC OCEAN/19/76) PHEMA_IAWIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 424-477 WILSON-SMITH/33) PNRAM_IAWIL NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 WILSON-SMITH/33) PRRP2_IAWIL RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 WILSON-SMITH/33) PVNUC_IAWIL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WILSON-SMITH/33) PVNUC_IAWIS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WISCONSIN/3523/88) PHEMA_IAXIA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 XIANFENG/3/89) PPRP2_INBAC RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 157-194 SUB P2 ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP3_INBAC RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 2-33 472-509 SUB P3 ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP2_INBAD RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 164-194 SUB P2 ANN ARBOR/1/66 [WILD-TYPE] PRRP3_INBAD RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 2-33 472-509 SUB P3 ANN ARBOR/1/66 [WILD-TYPE] PHEMA_INBBE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 400-431 439-483 BEIJING/1/87) PHEMA_INBBO HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 390-421 429-473 BONN/43) PHEMA_INBEN HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 398-429 437-481 ENGLAND/222/82) PHEMA_INBHK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 391-418 429-473 HONG KONG/8/73) PHEMA_INBLE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 399-430 438-482 LEE/40) PNRAM_INBLE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 4-35 LEE/40) PVNS2_INBLE NONSTRUCTURAL PROTEIN INFLUENZA B VIRUS (STRAIN B/ 51-78 NS2 LEE/40) PHEMA_INBMD HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 389-420 428-472 MARYLAND/59) PHEMA_INBME HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 393-424 432-476 MEMPHIS/6/86) PHGEMA_INBOR HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 398-429 437-481 OREGON/5/80) PVNS1_INBPA NONSTRUCTURAL PROTEIN INFLUENZA B VIRUS (STRAIN B/ 171-198 NS1 PA/79) PHEMA_INBSI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 398-429 437-481 SINGAPORE/222/79) PRRP2_INBSI RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 157-194 SUB P2 SINGAPORE/222/79) PHEMA_INBUS HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 391-422 430-474 USSR/100/83) PHEMA_INBVK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 400-431 439-483 VICTORIA/2/87) PHEMA_INBVI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 393-424 432-476 VICTORIA/3/85) PVNS2_INBYA NONSTRUCTURAL PROTEIN INFLUENZA B VIRUS (STRAIN B/ 51-78 NS2 YAMAGATA/1/73) PRRP3_INCBE RNA-DIRECTED RNA POL INFLUENZA C VIRUS (STRAIN C/ 509-536 SUB P3 BERLIN/1/85) PHEMA_INCCA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 495-571 CALIFORNIA/78) PVNUC_INCAA NUCLEOPROTEIN INFLUENZA C VIRUS (STRAIN C/  99-126 416-443 451-478 CALIFORNIA/78) PHEMA_INCEN HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 ENGLAND/892/83) PHEMA_INCGL HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 GREAT LAKES/1167/54) PHEMA_INCHY HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558 HYOGO/1/83) PRRP_INCJJ RNA-DIRECTED RNA POL INFLUENZA C VIRUS (STRAIN C/ 509-536 SUB P3 JJ/50) PVMAT_INCJJ MATRIX (M) PROTEIN INFLUENZA C VIRUS (STRAIN C/ 151-185 JJ/50) PVNS2_INCJJ NONSTRUCTURAL PROTEIN INFLUENZA C VIRUS (STRAIN C/ 71-98 NS2 JJ/50) PHEMA_INCJH HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 496-572 JOHANNESBURG/1/66) PHEMA_INCKY HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558 KYOTO/41/82) PHEMA_INCMI HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558 MISSISSIPPI/80) PHEMA_INCNA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558 NARA/82) PHEMA_INCP1 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 PIG/BEIJING/10/81) PHEMA_INCP2 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 PIG/BEIJING/115/81) PHEMA_INCP3 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 PIG/BEIJING/439/82) PHEMA_INCTA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 TAYLOR/1233/47) PHEMA_INCYA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 YAMAGATA/10/81) PENV_MLVKI ENV POLYPROTEIN KIRSTEN MURINE LEUKEMIA 40-81 VIRUS PVGLB_HSVMD GLYCOPROTEIN B PRECURSOR MAREK'S DISEASE HERPES  93-120 352-379 VIRUS (STRAIN RB-1B) PENV_MCFF ENV POLYPROTEIN MINK CELL FOCUS-FORMING 473-512 MURINE LEUKEMIA VIRUS PENV_MCFF3 ENV POLYPROTEIN MINK CELL FOCUS-FORMING 488-515 MURINE LEUKEMIA VIRUS (ISOLATE CI-3) PENV_MLVMO ENV POLYPROTEIN MOLONEY MURINE LEUKEMIA 502-543 VIRUS PDNBI_MCMVS MAJOR DNA-BINDING PROTEIN MURINE CYTOMEGALO VIRUS 584-618 (STRAIN SMITH) PIC18_MCMVS PROB PROC & TRANSPORT PRO MURINE CYTOMEGALO VIRUS 661-691 (STRAIN SMITH) PVGLB_MCMVS GLYCOPROTEIN B PRECURSOR MURINE CYTOMEGALO VIRUS 381-408 441-475 (STRAIN SMITH) VIE1_MCMVS IMMEDIATE-EARLY PROTEIN 1 MURINE CYTOMEGALO VIRUS 261-288 (STRAIN SMITH) PVE2_PCPV1 E2 PROTEIN PYGMY CHIMPANZEE 267-294 327-361 PAPILLOMA VIRUS TYPE 1 PVE5_PCPV1 PROBABLE E5 PROTEIN PYGMY CHIMPANZEE 35-62 PAPILLOMA VIRUS TYPE 1 PENV_MLVRD ENV POLYPROTEIN RADIATION MURINE LEUKEMIA 497-538 VIRUS PPOL_MLVRD POL POLYPROTEIN RADIATION MURINE LEUKEMIA 716-743 805-832 VIRUS PENV_MLVRK ENV POLYPROTEIN RADIATION MURINE LEUKEMIA 497-538 VIRUS (STRAIN KAPLAN) PPOL_MLVRK POL POLYPROTEIN RADIATION MURINE LEUKEMIA 101-128 190-217 VIRUS (STRAIN KAPLAN) PDNBI_SCMBC MAJOR DNA-BINDING PROTEIN SIMIAN CYTOMEGALO VIRUS 435-462 532-559 (STRAIN COLBURN) PPOLG_HPAVS GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS 207-241 1025-1052 1115-1192 (STRAIN AGM-27) PPOLG_HPAVT GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS 203-237 (STRAIN CY-145) PENV_SIVA1 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 269-310 561-588 592-619 652-679 697-724 VIRUS (AGM155 ISOLATE) PPOL_SIVA1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 431-458 547-574 637-671 VIRUS (AGM155 ISOLATE) PPOL_SIVA2 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 45-72 VIRUS (AGM266 ISOLATE) PENV_SIVAG ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 270-301 566-593 597-624 658-685 703-730 VIRUS (AGM3 ISOLATE) PPOL_SIVAG POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 436-463 482-516 642-669 VIRUS (AGM3 ISOLATE) PPOL_SIVA3 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 71-98 VIRUS (AGM385 ISOLATE) PENV_SIVS4 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 281-308 553-612 642-669 691-718 VIRUS (F236/SMH4 ISOLATE) PGAG_SIVS4 GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY  88-115 VIRUS (F236/SMH4 ISOLATE) PPOL_SIVS4 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 496-523 VIRUS (F236/SMH4 ISOLATE) PENV_SIVAI ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 257-291 336-372 548-603 634-708 VIRUS (ISOLATE AGM/CLONE GRI-1) PGAG_SIVAI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 473-507 VIRUS (ISOLATE AGM/CLONE GRI-1) PNEF_SIVAI NEGATIVE FACTOR SIMIAN IMMUNODEFICIENCY  96-137 VIRUS (ISOLATE AGM/CLONE GRI-1) PPOL_SIVAI POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 478-515 VIRUS (ISOLATE AGM/CLONE GRI-1) VIF_SIVAI VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY  2-36 VIRUS (ISOLATE AGM/CLONE GRI-1) PENV_SIVGB ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY  8-35 158-185 589-650 784-816 VIRUS (ISOLATE GB1) PPOL_SIVGB POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 222-254 636-670 VIRUS (ISOLATE GB1) PENV_SIVMK ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 553-608 VIRUS (K6W ISOLATE) PGAG_SIVMK GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY  88-115 VIRUS (K6W ISOLATE) PPOL_SIVMK POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 533-560 VIRUS (K6W ISOLATE) PENV_SIVML ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 549-608 VIRUS (K78 ISOLATE) PENV_SIVM1 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 120-150 550-609 671-715 VIRUS (MM142-83 ISOLATE) PPOL_SIVM1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 553-560 VIRUS (MM142-83 ISOLATE) PENV_SIVM2 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 156-215 277-289 VIRUS (MM251 ISOLATE) PENV_SIVSP ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 286-313 554-595 646-722 VIRUS (PBJ/BC13 ISOLATE) PGAG_SIVSP GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY  88-115 VIRUS (PBJ/BC13 ISOLATE) PPOL_SIVSP POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 499-526 VIRUS (PBJ/BC13 ISOLATE) PGAG_SIVMS GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY  88-115 VIRUS (STM ISOLATE) PENV_SIVAT ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY  3-30 268-298 590-617 651-678 VIRUS (TYO-1 ISOLATE) PPOL_SIVAT POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 657-691 VIRUS (TYO-1 ISOLATE) PREV_SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCY 41-68 VIRUS (TYO-1 ISOLATE) PENV_MPMV ENV POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 422-470 PPOL_MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 574-612 670-697 PGAG_MPMV GAG POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 222-260 (MPMV) PEXON_VZVD ALKALINE EXONUCLEASE VARICELLA-ZOSTER VIRUS 109-139 (STRAIN DUMAS) PHELI_VZVD PROBABLE HELICASE VARICELLA-ZOSTER VIRUS 490-517 701-728 (STRAIN DUMAS) PRIR1_VZVD RIBONUC-DIPHOSPH VARICELLA-ZOSTER VIRUS 119-146 REDUCT LARGE CHA (STRAIN DUMAS) PTEGU_VZVD LARGE TEGUMENT PROTEIN VARICELLA-ZOSTER VIRUS 1121-1158 1579-1609 (STRAIN DUMAS) PUL14_VZVD HYPOTHETICAL GENE 46 VARICELLA-ZOSTER VIRUS  64-101 PROTEIN (STRAIN DUMAS) PUL21_VZVD GENE 38 PROTEIN VARICELLA-ZOSTER VIRUS 380-407 (STRAIN DUMAS) PUL34_VZVD VIRION GENE 24 PROTEIN VARICELLA-ZOSTER VIRUS 112-139 (STRAIN DUMAS) PUL37_VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS 107-134 485-512 719-746  976-1003 (STRAIN DUMAS) PUL41_VZVD HOST SHUTOFF VIRION VARICELLA-ZOSTER VIRUS 330-364 PROTEIN (STRAIN DUMAS) PUL43_VZVD GENE 15 MEMBRANE VARICELLA-ZOSTER VIRUS 129-156 312-349 PROTEIN (STRAIN DUMAS) PUL52_VZVD PROB DNA REP GENE 6 VARICELLA-ZOSTER VIRUS 301-337 PROTEIN (STRAIN DUMAS) PVGLC_VZVD GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 295-322 (STRAIN DUMAS) PVP40_VZVD CAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS 174-208 495-522 (STRAIN DUMAS) PVTER_VZVD PROBABLE DNA PACKAGING VARICELLA-ZOSTER VIRUS 394-421 PROTEIN (STRAIN DUMAS) PVGLC_VZVS GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 295-322 (STRAIN SCOTT) PDPOL_WHV1 DNA POLYMERASE WOODCHUCK HEPATITIS 285-326 VIRUS 1 PDPOL_WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS 290-331 VIRUS 59 PDPOL_WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS 212-242 290-331 VIRUS 7 PDPOL_WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS 211-241 289-330 VIRUS 8 PDPOL_WHV8I DNA POLYMERASE WOODCHUCK HEPATITIS 212-242 290-331 VIRUS 8

TABLE VIII 107 × 178 × 4 SEARCH MOTIF RESULTS SUMMARY FOR ALL PROCARYOTIC PROTEINS PCGENE 107 × 178 × 4 Prokaryotic Sequences FILE NAME PROTEIN ORGANISM AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 AREA 9 P120K_RICRI 120 KD SURFACE-EXPOSED RICKETTSIA RICKETTSII  83-110  240-298  355-382  638-672  746-838 1168-1202 PROTEIN P17K_RICTY 17 KD ANTIGEN PRECURSOR RICKETTSIA TYPHI  67-94 P190K_RICRI 190 KD ANTIGEN PRECURSOR RICKETTSIA RICKETTSII  241-268  460-487  607-634  754-781  829-856  904-931 1220-1254 1544-1571 1723-1750 (CELL SURFACE) 2065-2096 2131-2168 P22KD_DESMO 22.6 KD PROTEIN DESULFUROCOCCUS MOBILIS  25-52  59-89  120-147 P40KD_VIBAN 40 KD PROTEIN PRECURSOR VIBRIO ANGUILLARUM  153-196 P60IM_ECOLI 60 KD INNER-MEMBRANE ESCHERICHIA COLI  511-538 PROTEIN P60IM_PROMI 60 KD INNER-MEMBRANE PROTEUS MIRABILIS  14-41 PROTEIN P65KD_ZYMMO 65 KD PROTEIN ZYMOMONAS MOBILIS  95-122  444-524 P6PGD_BACSU PROB 6-PHOSPHOGLUCONATE BACILLUS SUBTILIS  24-51  218-246 DEHYDROGENASE P6PGD_ECOLI 6-PHOSPHOGLUCONATE ESCHERICHIA COLI  205-232 DEHYDROGENASE P6PGD_SALTY 6-PHOSPHOGLUCONATE SALMONELLA TYPHIMURIUM  205-232 DEHYDROGENASE PAACA_STAAU 6′-AMINOGLYCOSIDE STAPHYLOCOCCUS AUREUS  450-477 N-ACETYLTRANSFERASE PAAT_BACSP ASPARTATE AMINOTRANS- BACILLUS SP  146-173  185-212 FERASE PAAT_ECOLI ASPARTATE AMINOTRANS- ESCHERICHIA COLI  351-378 FERASE PABC_ECOLI ABC PROTEIN ESCHERICHIA COLI  176-203 PABIC_LACLA ABORTIVE PHAGE RESIS- LACTOCOCCUS LACTIS  85-126  170-204  209-273 TANCE PROTEIN ABIC PACCR_AGRTU TRANSCRIPTIONAL AGROBACTERIUM TUMEFACIENS  127-154 REPRESSOR ACCR PACEA_ECOLI ISOCITRATE LYASE ESCHERICHIA COLI  398-432 PACON_BACSU ACONITATE HYDRATASE BACILLUS SUBTILIS  48-75 PACON_ECOLI ACONITATE HYDRATASE ESCHERICHIA COLI  41-68  613-640 PACOR_ALCEU ACETOIN CATABOLISM REG ALCALIGENES EUTROPHUS  85-112 PRO PACP_ECOLI ACYL CARRIER PROTEIN ESCHERICHIA COLI   4-31 PACRA_ECOLI ACRIFLAVIN RESISTANCE ESCHERICHIA COLI  213-247 PROTEIN A PRECURSOR PACRB_ECOLI ACRIFLAVIN RESISTANCE ESCHERICHIA COLI  520-551 PROTEIN B PACRF_ECOLI ACRIFLAVIN RESISTANCE ESCHERICHIA COLI  512-550  726-753 PROTEIN F PACT3_STRCO PUTATIVE KETOACYL STREPTOMYCES COELICOLOR  157-184 REDUCTASE PACTA_LISMO ACTIN-ASSEMBLY INDUCING LISTERIA MONOCYTOGENES  237-264  576-603 PROTEIN PRECURSOR PACVS_NOCLA ACV SYNTHETASE NOCARDIA LACTAMDURANS 3129-3163 PADAA_BACSU METPHOSTRIESTER-DNA BACILLUS SUBTILIS  136-170 ALKYLTRANSFERASE PADDA_BACSU ATP-DEPENDENT NUCLEASE BACILLUS SUBTILIS  398-425  454-481  522-556 1005-1032 SUBUNIT A PADDB_BACSU ATP-DEPENDENT NUCLEASE BACILLUS SUBTILIS  257-284  870-903  943-977 SUBUNIT B PADHI_CLOAB NADPH-DEPENDENT CLOSTRIDIUM ACETOBUTYLICUM  284-311 BUTANOL DEHYDROGENASE PADHA_CLOAB NADH-DEPENDENT BUTANOL CLOSTRIDIUM ACETOBUTYLICUM  298-325 DEHYDROGENASE A PADHB_CLOAB NADH-DEPENDENT BUTANOL CLOSTRIDIUM ACETOBUTYLICUM  298-325 DEHYDROGENASE B PADHE_CLOAB ALCOHOL DEHYDROGENASE CLOSTRIDIUM ACETOBUTYLICUM  653-680  779-806 PADHE_ECOLI ALCOHOL DEHYDROGENASE ESCHERICHIA COLI  271-298 PADIY_ECOLI PUTATIVE REGULATORY ESCHERICHIA COLI  45-72 PROTEIN ADIY PADP1_MYCGE 140 KD ADHESION MYCOPLASMA GENITALIUM  90-131  697-724  923-950  990-1017 1169-1199 1387-1414 PRECURSOR PADP1_MYCPN ADHESION P1 PRECURSOR MYCOPLASMA PNEUMONIAE 1557-1584 PADT_RICPR ADP, ATP CARRIER PROTEIN RICKETTSIA PROWAZEKII  276-307 PAERA_AERHY AEROLYSIN PRECURSOR AEROMONAS HYDROPHILA  278-305 PAGAL_STRMU ALPHA-GALACTOSIDASE STREPTOCOCCUS MUTANS  419-483  597-633 PAGAR_PSEAT BETA-AGARASE PRECURSOR PSEUDOMONAS ATLANTICA  26-53 PAGR_STAAU ACCESSORY GENE STAPHYLOCOCCUS AUREUS  129-159  165-192 REGULATOR PROTEIN PAIL_YEREN ATTACH INVAS LOCUS YERSINIA ENTEROCOLITICA  19-46 PROTEIN PRECURSOR PAK1H_ECOLI ASPARTOKINASE I ESCHERICHIA COLI   3-30  466-493  503-530 PAK2H_ECOLI ASPARTOKINASE II ESCHERICHIA COLI  51-78  608-635 PAK2_BACSU ASPARTATE KINASE II ALPHA BACILLUS SUBTILIS  266-312 AND BETA SUBUNITS PAKAB_CORGL ASPARTATE KINASE ALPHA CORYNEBACTERIUM GLUTMICUM   5-32 AND BETA SUBUNITS PALF_ECOLI FRUCTOSE-BISPHOSPHATE ESCHERICHIA COLI  286-316 ALDOLASE PALGB_PSEAE ALGINATE BIOSYN TRANSL PSEUDOMONAS AERUGINOSA  160-194 REG PROTEIN ALBG PALGE_PSEAE ALGINATE PRODUCTION PSEUDOMONAS AERUGINOSA  349-376 PROTEIN ALGE PRECURSO PALGP_PSEAE TRANSCRIPTIONAL REGULA- PSEUDOMONAS AERUGINOSA  81-115 LATORY PROTEIN ALGP PALKB_PSEOL ALKANE-1 MONOOXYGENASE PSEUDOMONAS OLEOVORANS  115-142 PALKT_PSEOL RUBREDOXIN-NAD(+) PSEUDOMONAS OLEOVORANS  138-172  338-365 REDUCTASE PALR2_ECOLI ALANINE RACEMASE, ESCHERICHIA COLI   9-36 CATABOLIC PRECURSOR PALR_BACST ALANINE RACEMASE BACILLUS STEAROTHERMOPHILUS  326-353 PALSR_BACSU ALS OPERON REGULATORY BACILLUS SUBTILIS  119-146 PROTEIN PALYS_BACSP AUTOLYSIN PRECURSOR BACILLUS SP  157-187 PALYS_BACSU AUTOLYSIN PRECURSOR BACILLUS SUBTILIS  147-191 PALYS_STAAU AUTOLYSIN STRAPHYLOCOCCUS AUREUS  244-271 PAMIA_STRPN AMIA PROTEIN PRECURSOR STREPTOCOCCUS PNEUMONIAE  223-264  297-338  446-473 PAMID_PSECL AMIDASE PSEUDOMONAS CHLORORAPHIS  72-99 PAMIE_STRPN OLIGOPEPTIDE TRANSPORT STREPTOCOCCUS PNEUMONIAE  187-214 PROTEIN AMIE PAMPA_ECOLI AMINOPEPTIDASE A/I ESCHERICHIA COLI  111-138  199-226 PAMPC_SERMA BETA-LACTAMASE SERRATIA MERCESCENS  231-258 PRECURSOR PAMPL_RICPR CYTOSOL AMINOPEPTIDASE RICKETTSIA PROWAZEKII   3-47  72-99 PAMPN_ECOLI AMINOPEPTIDASE N ESCHERICHIA COLI  655-682 PAMPP_ECOLI X-PRO AMINOPEPTIDASE ESCHERICHIA COLI  110-137 PAMPT_THEAQ AMINOPEPTIDASE T THERMUS AQUATICUS  281-308 PAMY1_DICTH ALPHA-AMYLASE 1 DICTYOGLOMUS THERMOPHILUM  507-534 PAMY2_DICTH ALPHA-AMYLASE 2 DICTYOGLOMUS THERMOPHILUM  151-178  507-534 PAMY2_SALTY CYTOPLASMIC ALPHA- SALMONELLA TYPHIMURIUM  70-104 AMYLASE PAMY3_DICTH ALPHA-AMYLASE 3 DICTYOGLOMUS THERMOPHILUM  280-307 PAMYB_BACCI BETA-AMYLASE PRECURSOR BACILLUS CIRCULANS  61-88 PAMYB_BACPO BETA-AMYLASE BACILLUS POLYMYXA  60-87  266-293 1143-1184 PAMYB_CLOTU BETA-AMYLASE, THERMO- CLOSTRIDIUM THERMO-  269-296  378-405  459-486 PHILIC PRECURSOR SULFUROGENES PAMYG_CLOSP GLUCOAMYLASE PRECURSOR CLOSTRIDIUM SP  103-148  480-510 PAMYM_BACST MALTOGENIC ALPHA- BACILLUS STEAROTHERMOPHILUS  426-453 AMYLASE PRECURSOR PAMYR_BACS8 RAW-STARCH-DIGESTING BACILLUS SP  210-237  435-465  615-642 AMYLASE PAMY_AERHY ALPHA-AMYLASE AEROMONAS HYDROPHILA  415-453 PRECURSOR PAMY_ALTHA ALPHA-AMYLASE ALTEROMONAS HALOPLANKTIS  166-193 PRECURSOR PAMY_BACAM ALPHA-AMYLASE BACILLUS AMYLOLIQUE-  102-136 PRECURSOR FACIENS PAMY_BACCI ALPHA-AMYLASE BACILLUS CIRCULANS  212-239  437-474 PRECURSOR PAMY_BACME ALPHA-AMYLASE BACILLUS MEGATERIUM  61-88  441-482 PRECURSOR PAMY_BACSU ALPHA-AMYLASE BACILLUS SUBTILIS  165-205  281-308 PRECURSOR PAMY_BUTFI ALPHA-AMYLASE BUTYRIVIBRIO FIBRISOLVENS  377-418  546-573  579-606  795-822 PRECURSOR PAMY_CLOAB PUTATIVE ALPHA-AMYLASE CLOSTRIDIUM ACETOBUTYLICUM  283-310 PAMY_CLOTU ALPHA-AMYLASE CLOSTRIDUM THERMO-  431-468  612-642 PRECURSOR SULFUROGENES PAMY_STRLM ALPHA-AMYLASE STREPTOMYCES LIMOSUS  173-200 PRECURSOR PANFA_AZOVI NITROGEN FIXATION AZOTOBACTER VINELANDII  232-259 PROTEIN ANFA PANFD_AZOVI NITROGENASE IRON-IRON AZOTOBACTER VINELANDII  95-122 PROTEIN ALPHA CHAIN PANFK_AZOVI NITROGENASE IRON-IRON AZOTOBACTER VINELANDII  369-396 PROTEIN BETA CHAIN PANGR_VIBAN ANGR PROTEIN VIBRIO ANGUILLARIUM  93-120  169-203 PAPCE_FREDI PHYCOBILISOME 120 KD FREMYELLA DIPLOSIPHON  51-78 LINKER POLYPEPTIDE PAPCE_SYNP6 PHYCOBILISOME LINKER SYNECHOCOCCUS SP  37-64  585-615 POLYPEPTIDE PAPCE_SYNY4 PHYCOBILISOME 120 KD SYNECHOCYSTIS SP  52-79 LINKER POLYPEPTIDE PAPHC_SALTY ALKYL HYDROPEROXIDE SALMONELLA TYPHIMURIUM  62-89 REDUCTASE C22 PROTEIN PAPI_ACHLY PROTEASE I PRECURSOR ACHROMOBACTER LYTICUS  478-505 PAPPC_ECOLI PROBABLE CYTOCHROME ESCHERICHIA COLI  118-148 OXIDASE SUBUNIT I PAPRD_PSEAE ALKALINE PROTEASE SECRE- PSEUDOMONAS AERUGINOSA  416-450 TION PROTEIN APRD PAPRE_PSEAE ALKALINE PROTEASE SECRE- PSEUDOMONAS AERUGINOSA  133-193  208-235  247-277 TION PROTEIN APRE PAPT_ECOLI ADENINE PHOSPHORIBOSYL- ESCHERICHIA COLI  121-148 TRANSFERASE PAPU_THEET ALPHA-AMYLASE- THERMOANAEROBACTER  276-303  347-374  936-982  987-1014 1210-1254 1381-1408 PULLULANASE PRECURSOR ETHANOLICUS PARCA_MYCAR ARGININE DEIMINASE MYCOPLASMA ARGININI  60-87  218-245 PARCB_ECOLI AEROBIC RESPIRATION ESCHERICHIA COLI  102-150  302-329  399-426 CONTROL PROTEIN ARCB PARCD_PSEAE PROBABLE ARGININE/ PSEUDOMONAS AERUGINOSA  274-301  386-420 ORNITHINE ANTIPORTER PARGA_ECOLI AMINO-ACID ACETYL- ESCHERICHIA COLI  82-109 TRANSFERASE PARGT_ECOLI LYS-ARG-ORN-BINDING ESCHERICHIA COLI  84-111 PROTEIN (LAO) PRECURSO PAROA_STAAU PHOSPHOSHIKIMATE 1- STAPHYLOCOCCUS AUREUS  86-120 CARBOXYVINYLTRANSFER PAROC_ECOLI CHORISMATE SYNTHASE ESCHERICHIA COLI  68-95 PAROC_SALTI CHORISMATE SYNTHASE SALMONELLA TYPHI  68-95 PAROD_BACSU DEHYDROQUINATE BACILLUS SUBTILIS  49-76 DEHYDRATASE PAROK_ECOLI SHIKIMATE KINASE I ESCHERICHIA COLI  84-118 PARP4_STRPY IGA RECEPTOR PRECURSOR STREPTOCOCCUS PYOGENES  12-46  127-157  266-324 PARP_ECOLI ARP PROTEIN ESCHERICHIA COLI  255-282 PARSA_ECOLI ARSENICAL PUMP-DRIVING ESCHERICHIA COLI  201-238 ATPASE PARSB_ECOLI ARSENICAL PUMP ESCHERICHIA COLI  291-318 MEMBRANE PROTEIN PARSB_STAAU ARSENICAL PUMP STAPHYLOCOCCUS AUREUS  27-71  295-322 MEMBRANE PROTEIN PARSB_STAXY ARSENICAL PUMP STAPHYLOCOCCUS XYLOSUS  27-71  295-322 MEMBRANE PROTEIN PARSR_STAAU ARSENICAL RESIST OPERON STAPHYLOCOCCUS AUREUS  56-93 REPRESSOR PROTEIN PARTA_ECOLI ARTA PROTEIN ESCHERICHIA COLI   3-30 PARTI_ECOLI TRANSPORT SYSTEM ESCHERICHIA COLI  105-132  213-240 PROTEIN ARTI PARTP_ECOLI TRANSPORT SYSTEM ESCHERICHIA COLI  176-206 PROTEIN ARTP PASA1_ENTFA AGGREGATION SUBSTANCE ENTEROCOCCUS FAECALIS  195-254  478-505  799-826  859-896 PRECURSOR PASNA_ECOLI ASPARTATE-AMMONIA ESCHERICHIA COLI  127-158 LIGASE PASNB_ECOLI ASPARAGINE SYNTHETASE B ESCHERICHIA COLI  450-477 PASNC_ECOLI REGULATORY PROTEIN ASNC ESCHERICHIA COLI  116-143 PASPA_BACSU ASPARTATE AMMONIA- BACILLUS SUBTILIS   7-34 LYASE PASPA_ECOLI ASPARTATE AMMONIA- ESCHERICHIA COLI  204-236 LYASE PASPA_SERMA ASPARTATE AMMONIA- SERRATIA MARCESCENS  204-231 LYASE PASPG_BACLI L-ASPARAGINASE BACILLUS LICHENIFORMIS  252-288 PASPG_ERWCH L-ASPARAGINASE ERWINIA CHRYSANTHEMI  188-218 PRECURSOR PASPQ_ACIGL GLUTAMINASE- ACINETOBACTER GLUTA-  46-80 ASPARAGINASE MINASIFICANS PASSY_ECOLI ARGININOSUCCINATE ESCHERICHIA COLI  354-381 SYNTHASE PASSY_METBA ARGININOSUCCINATE METHANOSARCINA BARKERI  287-314 SYNTHASE PATBP_STAAU POTENTIAL ATP-BINDING STAPHYLOCOCCUS AUREUS  41-68  201-245 PROTEIN PATKA_ENTFA POTASSIUM/COPPER- ENTEROCOCCUS FAECALIS  41-80  347-374 TRANSPORTING ATPASE A PATKB_ENTFA POTASSIUM/COPPER- ENTEROCOCCUS FAECALIS  280-310  450-477 TRANSPORTING ATAPSE B PATMB_SALTY MG (2+) TRANSPORT ATPASE, SALMONELLA TYPHIMURIUM  503-530 P-TYPE PATP6_SYNP6 ATP SYNTHASE A CHAIN SYNECHOCOCCUS SP  233-260 PATP6_VIBAL ATP SYNTHASE A CHAIN VIBRIO ALGINOLYTICUS  11-38 PATPA_ANASP ATP SYNTHASE ALPHA ANABAENA SP   9-36  96-130 CHAIN PATPA_BACME ATP SYNTHASE ALPHA BACILLUS MEGATERIUM   4-36  453-480 CHAIN PATPA_ECOLI ATP SYNTHASE ALPHA ESCHERICHIA COLI  486-513 CHAIN PATPA_ENTFA ATP SYNTHASE ALPHA ENTEROCOCCUS FAECALIS   4-36  484-518 CHAIN PATPA_MYCGA ATP SYNTHASE ALPHA MYCOPLASMA GALLISEPTICUM  362-409 CHAIN PATPA_PROMO ATP SYNTHASE ALPHA PROPIONIGENIUM MODESTUM   6-36 CHAIN PATPA_RHORU ATP SYNTHASE ALPHA RHODOSPIRILLUM RUBRUM  165-200  459-486 CHAIN PATPA_SULAC ATPASE ALPHA CHAIN SULFOLOBUS ACIDOCALDARIUS  318-345  562-589 PATPA_SYNP1 ATP SYNTHASE ALPHA SYNECHOCOCCUS SP   7-44 CHAIN PATPA_SYNP6 ATP SYNTHASE ALPHA SYNECHOCOCCUS SP   8-45  362-389 CHAIN PATPA_SYNY3 ATP SYNTHASE ALPHA SYNECHOCYSTIS SP   8-37  454-500 CHAIN PATPA_THEP3 ATP SYNTHASE ALPHA THERMOPHILIC BACTERIUM PS-3   9-36 CHAIN PATPA_VIBAL ATP SYNTHASE ALPHA VIBRIO ALGINOLYTICUS  464-513 CHAIN PATPB_ANASP ATP SYNTHASE BETA CHAIN ANABAENA SP  280-307  370-397 PATPB_BACFI ATP SYNTHASE BETA CHAIN BACILLUS FIRMUS  163-190  358-385 PATPB_MYCGA ATP SYNTHASE BETA CHAIN MYCOPLASMA GALLISEPTICUM  375-402 PATPB_RHORU ATP SYNTHASE BETA CHAIN RHODOSPIRILLUM RUBRUM  359-386 PATPB_SULAC ATPASE BETA CHAIN SULFOLOBUS ACIDOCALDARIUS  164-191 PATPB_SYNP1 ATP SYNTHASE BETA CHAIN SYNECHOCOCCUS SP  381-408 PATPB_SYNP6 ATP SYNTHASE BETA CHAIN SYNECHOCOCCUS SP  291-318  381-408 PATPB_SYNY3 ATP SYNTHASE BETA CHAIN SYNECHOCYSTIS SP  381-408 PATPD_ANASP ATP SYNTHASE DELTA CHAIN ANABAENA SP  109-139  143-170 PATPD_BACFI ATP SYNTHASE DELTA CHAIN BACILLUS FIRMUS  63-90  133-160 PATPD_BACME ATP SYNTHASE DELTA CHAIN BACILLUS MEGATERIUM  132-159 PATPD_ENTFA ATP SYNTHASE DELTA CHAIN ENTEROCOCCUS FAECALIS  14-41 PATPD_PROMO ATP SYNTHASE DELTA CHAIN PROPIONIGENIUM MODESTUM  79-116  118-149 PATPD_RHOBL ATP SYNTHASE DELTA CHAIN RHODOPSEUDOMONAS BLASTICA  125-152 PATPD_RHORU ATP SYNTHASE DELTA CHAIN RHODOSPIRILLUM RUBRUM  119-146 PATPD_SYNP1 ATP SYNTHASE DELTA CHAIN SYNECHOCOCCUS SP  100-127 PATPD_SYNY3 ATP SYNTHASE DELTA CHAIN SYNECHOCYSTIS SP  113-147 PATPD_VIBAL ATP SYNTHASE DELTA CHAIN VIBRIO ALGINOLYTICUS  110-137 PATPE_BACFI ATP SYNTHASE EPSILON BACILLUS FIRMUS  53-80 CHAIN PATPE_MYCGA ATP SYNTHASE EPSILON MYCOPLASMA GALLISEPTICUM  99-126 CHAIN PATPE_PROMO ATP SYNTHASE EPSILON PROPIONIGENIUM MODESTUM  100-127 CHAIN PATPE_SYNP1 ATP SYNTHASE EPSILON SYNECHOCOCCUS SP  72-106 CHAIN PATPF_ANASP ATP SYNTHASE B CHAIN ANABAENA SP  17-44  51-78  137-164 PATPF_BACFI ATP SYNTHASE B CHAIN BACILLUS FIRMUS  110-151 PATPF_BACME ATP SYNTHASE B CHAIN BACILLUS MEGATERIUM  55-85  122-170 PATPF_MYCGA ATP SYNTHASE B CHAIN MYCOPLASMA GALLISEPTICUM  82-135  170-197 PATPF_SNYP1 ATP SYNTHASE B CHAIN SYNECHOCOCCUS SP  15-49  111-159 PATPF_SYNP6 ATP SYNTHASE B CHAIN SYNECHOCOCCUS SP  12-39  128-155 PATPF_THEP3 ATP SYNTHASE B CHAIN THERMOPHILIC BACTERIUM PS-3  50-77 PRECURSOR PATPG_ANASP ATP SYNTHASE GAMMA ANABAENA SP  276-310 CHAIN PATPG_ECOLI ATP SYNTHASE GAMMA ESCHERICHIA COLI  253-283 CHAIN PATPG_MYCGA ATP SYNTHASE GAMMA MYCOPLASMA GALLISEPTICUM  28-62  92-140 CHAIN PATPG_RHORU ATP SYNTHASE GAMMA RHODOSPIRILLUM RUBRUM  270-297 CHAIN PATPG_SYNP1 ATP SYNTHASE GAMMA SYNECHOCOCCUS SP  280-307 CHAIN PATPG_SYNY3 ATP SYNTHASE GAMMA SYNECHOCYSTIS SP  96-126  280-307 CHAIN PATP1_MYCGA ATP SYNTHASE PROTEIN I MYCOPLASMA GALLISPETICUM  133-167 PATPX_ANASP ATP SYNTHASE B′ CHAIN ANABAENA SP  129-156 PATPX_BACFI ATP SYNTHASE BETA CHAIN BACILLUS FIRMUS  162-189  356-383 PATPX_RHORU ATP SYNTHASE B′ CHAIN RHODOSPIRILLUM RUBRUM  40-74 PATPX_SYNP1 ATP SYNTHASE B′ CHAIN SYNECHOCOCCUS SP  57-110  128-155 PATPX_SYNP6 ATP SYNTHASE B′ CHAIN SYNECHOCOCCUS SP  70-100 PATPX_SYNY3 ATP SYNTHASE B′ CHAIN SYNECHOCYSTIS SP  108-135 PATPZ_BACME ATP SYNTHASE PROTEIN I BACILLUS MEGATERIUM  14-62 PATPZ_SYNP1 ATP SYNTHASE PROTEIN I SYNECHOCOCCUS SP  90-131 PAVRB_PSESG AVIRULENCE B PROTEIN PSEUDOMONAS SYRINGAE  184-211  233-260 PBA71_EUBSP 7-ALPHA-HYDROXYSTEROID EUBACTERIUM SP  26-53 DEHYDROGENASE PBA72_EUBSP 7-ALPHA-HYDROXYSTEROID EUBACTERIUM SP  26-53 DEHYDROGENASE PBACH_HALHM HALORHODOPSIN HALOBACTERIUM HALOBIUM  145-179 PBACH_HALSG HALORHODOPSIN HALOBACTERIUM SP  180-214 PRECURSOR PBAES_ECOLI SENSOR PROTEIN BAES ESCHERICHIA COLI  152-186 PBAG_STRAG IGA FC RECEPTOR STREPTOCOCCUS AGALACTIAE  92-119  138-204  267-306  343-385  487-524  562-589 1014-1041 PRECURSOR PBAHG_VITSP BACTERIAL HEMOGLOBIN VITREOSCILLA SP  119-146 PBAIC_EUBSP BILE ACID-INDUCIBLE EUBACTERIUM SP  423-450 OPERON PROTEIN C PBARA_ECOLI SENSOR PROTEIN BARA ESCHERICHIA COLI  334-361  425-455 PBASS_ECOLI SENSOR PROTEIN BASS ESCHERICHIA COLI  122-156 PBAT_HALHA PUTATIVE BACTERIO-OPSIN HALOBACTERIUM HALOBIUM  408-442 ACTIVATOR PBAX_ECOLI BAX PROTEIN ESCHERICHIA COLI  21-64 PBCCP_ECOLI BIOTIN CARBOXYL CARRIER ESCHERICHIA COLI   6-35 PROTEIN PBCHH_RHOCA METHYLTRANSFERASE RHODOBACTER CAPSULATUS 1000-1032 PBCHN_RHOCA PROTOCHLOROPHYLLIDE RHODOBACTER CAPSULATUS  249-276 REDUCTASE 46 KD CHAIN PBCN5_CLOPE BACTERIOCIN BCN5 CLOSTRIDIUM PERFRINGENS  72-99  585-646 PBCPA_PROAE BACTERIOCHLOROPHYLL A PROSTHECOCHLORIS AESTUARII  63-93 PROTEIN PBCSC_ACEXY CELLULOSE SYNTHASE ACETOBACTER XYLINUM  131-158 1055-1082 OPERON C PROTEIN PBCSD_ACEXY CELLULOSE SYNTHASE ACETOBACTER XYLINUM  10-37 OPERON D PROTEIN PBENA_ACICA BENZOATE 1,2-DIOXYGENASE ACINETOBACTER CALCOACETICUS  190-217 ALPHA SUBUNIT PBETT_ECOLI HIGH AFFINITY CHOLINE ESCHERICHIA COLI  243-270 TRANSPORT PROTEIN PBEXA_HAEIN BEXA PROTEIN HAEMOPHILUS INFLUENZAE  23-50 PBEXC_HAEIN BEXC PROTEIN HAEMOPHILUS INFLUENZAE  157-184  226-253 PBEXD_HAEIN BEXD PROTEIN HAEMOPHILUS INFLUENZAE  205-239 PBFR_NITWI BACTERIOFERRITIN NITROBACTER WINOGRADSKYI   8-35 PBGA2_ECOLI EVOLVED BETA-GALACTO- ESCHERICHIA COLI  955-985 SIDASE ALPHA-SUBUNIT PBGAL_BACST BETA-GALACTOSIDASE BACILLUS STEAROTHERMOPHILUS  599-633 PBGAL_CLOAB BETA-GALACTOSIDASE CLOSTRIDIUM ACETOBUTYLICUM  824-851 PBGAL_CLOTU BETA-GALACTOSIDASE CLOSTRIDIUM THERMO-  161-191 SULFUROGENES PBGAL_KLEPN BETA-GALACTOSIDASE KLEBSIELLA PNEUMONIAE  245-272 PBGAL_LACDE BETA-GALACTOSIDASE LACTOBACILLUS DELBRUECKII  305-332 PBGAL_STRTR BETA-GALACTOSIDASE STREPTOCOCCUS THERMOPHILUS  188-215 PBGAL_SULSO BETA-GALACTOSIDASE SULFOLOBUS SOLFATARICUS  59-86  179-206 PBGAM_LEULA BETA-GALACTOSIDASE LEUCONOSTOC LACTIS  129-156 SMALL SUBUNIT PBGAM_SULSO BETA-GALACTOSIDASE SULFOLOBUS SOLFATARICUS  106-140 PBGLA_CLOTM BETA-GLUCOSIDASE A CLOSTRIDIUM THERMOCELLUM  353-380  418-445 PBGLB_CLOTM THERMOSTABLE BETA- CLOSTRIDIUM THERMOCELLUM  259-286  375-409  554-581  631-665 GLUCOSIDASE B PBGLR_ECOLI BETA-GLUCURONIDASE ESCHERICHIA COLI  464-494  536-563 PBGLS_AGRSP BETA-GLUCOSIDASE AGROBACTERIUM SP  421-448 PBGLS_BUTFI BETA-GLUCOSIDASE A BUTYRIVIBRIO FIBRISOLVENS  85-112  435-462  692-719  738-765 PBIN3_STAAU POTENTIAL DNA-INVERTASE STAPHYLOCOCCUS AUREUS  60-87 BIN3 PBINL_STAAU TRANSPOSON TN552 STAPHYLOCOCCUS AUREUS  163-197 RESOLVASE PBINR_STAAU DNA-INVERTASE BINR STAPHYLOCOCCUS AUREUS  163-190 PBIOA_BACSH AMINOTRANSFERASE BACILLUS SPHAERICUS  33-60 PBIOB_BACSH BIOTIN SYNTHETASE BACILLUS SPHAERICUS  145-172 PBIOB_ECOLI BIOTIN SYNTHETASE ESCHERICHIA COLI  130-157 PBIOD_BACSH DETHIOBIOTIN SYNTHASE BACILLUS SPHAERICUS  144-171 PBLA1_BACCE BETA-LACTAMASE BACILLUS CEREUS  91-118  275-305 PRECURSOR, TYPE I PBLA1_HAEIN BETA-LACTAMASE ROB-1 HAEMOPHILUS INFLUENZAE  152-179  204-231 PRECURSOR PBLA2_BACCE BETA-LACTAMASE BACILLUS CEREUS  18-67  201-228 PRECURSOR, TYPE II PBLA2_BACSP BETA-LACTAMASE BACILLUS SP  18-67 PRECURSOR, TYPE II PBLA3_BACCE BETA-LACTAMASE BACILLUS CEREUS  35-83  95-129 PRECURSOR, TYPE III PBLA4_PSEAE BETA-LACTAMASE PSE-4 PSEUDOMONAS AERUGINOSA  19-50 PRECURSOR PBLAB_BACCE BETA-LACTAMASE BACILLUS CEREUS  20-66  200-227 PRECURSOR, TYPE II PBLAB_BACFR BETA-LACTAMASE BACTEROIDES FRAGILIS  22-49 PRECURSOR, TYPE II PBLAC_BACCE BETA-LACTAMASE BACILLUS CEREUS  93-120  276-303 PRECURSOR, TYPE I PBLAC_BACLI BETA-LACTAMASE BACILLUS LICHENIFORMIS  47-74  86-115 PRECURSOR PBLAC_PROMI BETA-LACTAMASE PROTEUS MIRABILIS  191-221 PRECURSOR PBLAC_PROVU BETA-LACTAMASE PROTEUS VULGARIS   4-38  240-267 PBLAC_STRAL BETA-LACTAMASE STREPTOMYCES ALBUS G  43-70 PRECURSOR PBLAD_KLEPN BETA-LACTAMASE KLEBSIELLA PNEUMONIAE  121-148 PRECURSOR PBLAI_STAAU PENICILLINASE REPRESSOR STAPHYLOCOCCUS AUREUS  19-74  99-126 PBLAO_ECOLI BETA-LACTAMASE ESCHERICHIA COLI  118-166  235-262 PRECURSOR PBLAP_ECOLI BETA-LACTAMASE PSE-2 ESCHERICHIA COLI  155-196 PRECURSOR PBLAR_BACLI REGULATORY PROTEIN BACILLUS LICHENIFORMIS  129-156  515-552 BLAR1 PBLAR_STAAU REGULATORY PROTEIN STAPHYLOCOCCUS AUREUS  87-114  122-161  234-261  281-312  503-539 BLAR1 PBMP_TREPA BASIC MEMBRANE PROTEIN TREPONEMA PALLIDUM  312-346 PRECURSOR PBMR_BACSU MULTIDRUG RESISTANCE BACILLUS SUBTILIS  277-304 PROTEIN PBNZA_PSEPU BENZENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA  36-63 ALPHA SUBUNIT PBNZB_PSEPU BENZENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA  119-153 BETA SUBUNIT PBNZD_PSEPU P4 SUBUNIT PSEUDOMONAS PUTIDA  179-213 PBPS2_DESAM BPS2 PROTEIN DESULFUROLOBUS AMBIVALENS  157-237  242-290  311-355  391-425  543-573 PBRAB_PSEAE CARRIER PROTEIN PSEUDOMONAS AERUGINOSA  260-287  313-340 PBRAE_PSEAE TRANSPORT PROTEIN BRAE PSEUDOMONAS AERUGINOSA  254-281 PBRAG_PSEAE BRAG PROTEIN PSEUDOMONAS AERUGINOSA   7-34 PBTUB_ECOLI VITAMIN B12 RECEPTOR ESCHERICHIA COLI  439-466 PRECURSOR PBTUE_ECOLI VITAMIN B12 TRANSPORT ESCHERICHIA COLI   6-33 PERIPLASMIC PROTEIN PBVGA_BORPE TRANSCRIPTION REGULATOR BORDETELLA PERTUSSIS  174-205 BVGA BORDETELLA BRONCHISEPTICA PBVGB_BORPE PERIPLASMIC PROTEIN BVGB BORDETELLA PERTUSSIS  116-143 PRECURSOR PBVGC_BORPE SENSOR PROTEIN BVGC BORDETELLA PERTUSSIS  39-66  202-229 PBVGS_BORBR VIRULENCE BVGS PROTEIN BORDETELLA BRONCHISEPTICA  113-143  341-368  501-531 PRECURSOR PBXA_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  313-340  686-729  733-762  815-842  851-893  968-995 1159-1207 TYPE A PRECURSOR PBXB_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  666-693  720-762  802-832  853-890 1004-1031 1058-1089 TYPE B PRECURSOR PBXC1_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  86-113  314-341  730-773  798-825  850-892 TYPE C1 PRECURSOR PBXD_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  473-500  526-576  727-770  804-831  847-892  906-963 1060-1087 TYPE D PRECURSOR PBXE_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  254-291  350-381  704-753  773-811  890-917  992-1019 1115-1149 TYPE E PRECURSOR PBXE_CLOBU BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  254-291  350-381  704-753  774-808  890-917  992-1019 1115-1149 TYPE E PRECURSOR PBXF_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  669-710  735-772  892-919 1013-1040 1095-1122 1183-1210 TYPE F PRECURSOR PC550_MICAE CYTOCHROME C550 MICROCYSTIS AERUGINOSA   3-30 PCADA_BACFI PROBABLE CADMIUM- BACILLUS FIRMUS  30-57  100-131  165-192  276-306  533-567 TRANSPORTING ATPASE PCADA_STAAU PROBABLE CADMIUM- STAPHYLOCOCCUS AUREUS  282-309  536-570 TRANSPORTING ATPASE PCADC_ECOLI TRANSCRIPTIONAL ESCHERICHIA COLI  54-85  412-443 ACTIVATOR CADC PCAFA_YERPE F1 CAPSULE ANCHORING YERSINIA PESTIS  203-240  416-457  530-557  619-646 PROTEIN PRECURSOR PCAPA_BACAN CAPA PROTEIN BACILLUS ANTHRACIS  108-138 PCAPB_BACAN CAPB PROTEIN BACILLUS ANTHRACIS  36-70 PCAPP_ANANI PHOSPHOENOLPYRUVATE ANACYSTIS NIDULANS  248-293 CARBOXYLASE PCAPP_ANASP PHOSPHOENOLPYRUVATE ANABAENA SP  98-125  157-184  687-728 CARBOXYLASE PCAPP_CORGL PHOSPHOENOLPYRUVATE CORYNEBACTERIUM GLUTMICUM  15-42 CARBOXYLASE PCAPP_ECOLI PHOSPHOENOLPYRUVATE ESCHERICHIA COLI  35-62 CARBOXYLASE PCARA_BACSU CARBAMOYL-PHOSPHATE BACILLUS SUBTILIS  274-319 SYNTHASE PCARB_BACSU CARBAMOYL-PHOSPHATE BACILLUS SUBTILIS  790-831 SYNTHASE PCARB_ECOLI CARBAMOYL-PHOSPHATE ESCHERICHIA COLI  454-481 SYNTHASE LARGE CHAI PCAT2_STAAU CHLORAMPHENICOL STAPHYLOCOCCUS AUREUS   7-34  87-114 ACETYLTRANSFERASE PCAT3_STAAU CHLORAMPHENICOL STAPHYLOCOCCUS AUREUS   7-34  87-114 ACETYLTRANSFERASE PCATA_ACICA CATECHOL 1,2-DIOXYGENASE ACINETOBACTER CALCOACETICUS  31-65 PCATA_BACST PEROXIDASE/CATALASE BACILLUS STEAROTHERMOPHILUS  440-470 PCATA_ECOLI CATALASE HPI ESCHERICHIA COLI  579-606 PCATA_MICLU CATALASE MICROCOCCUS LUTEUS  453-480 PCATA_SALTY CATALASE HPI SALMONELLA TYPHIMURIUM  515-542  580-607 PCATE_ECOLI CATALASE HPII ESCHERICHIA COLI  175-202 PCAT_CAMCO CHLORAMPHENICOL CAMPYLOBACTER COLI  84-111 ACETYLTRANSFERASE PCAT_CLOBU CHLORAMPHENICOL CLOSTRIDIUM BUTYRICUM  88-115 ACETYLTRANSFERASE PCAT_ECOLI CHLORAMPHENICOL ESCHERICHIA COLI  92-119 ACETYLTRANSFERASE PCAT_PROMI CHLORAMPHENICOL PROTEUS MIRABILIS  92-119 ACETYLTRANSFERASE PCAT_STAIN CHLORAMPHENICOL STAPHYLOCOCCUS INTERMEDIUS   7-34  87-114 ACETYLTRANSFERASE PCAT_STRAG CHLORAMPHENICOL STREPTOCOCCUS AGALACTIAE   7-34  87-114 ACETYLTRANSFERASE PCBHE_COXBU CBHE PROTEIN COXIELLA BURNETII  209-236 PCBPT_THEVU CARBOXYPEPTIDASE T THERMOACTINOMYCES VULGARIS  48-75 PRECURSOR PCCA_ECOLI TRNA NUCLEOTIDYL- ESCHERICHIA COLI  376-403 TRANSFERASE PCCMK_SYNP7 CO2 CONC MECH PROTEIN SYNECHOCOCCUS SP  29-56 CCMK PCCMM_SYNP7 CO2 CONC MECH PROTEIN SYNECHOCOCCUS SP  212-256  331-372  445-486 CCMM PCDAS_THEET CYCLOMALTODEXTRINASE THERMOANAEROBACTER  305-332 ETHANOLICUS PCDG1_BACMA CYCLOMALTODEXT BACILLUS MACERANS  439-466  616-643 GLUCANOTRANS PRECURSOR PCDG2_BACMA CYCLOMALTODEXT BACILLUS MACERANS  210-251  436-466  615-642 GLUCANOTRANS PRECURSOR PCDGT_BACCI CYCLOMALTODEXT BACILLUS CIRCULANS  217-244  442-472  594-651 GLUCANOTRANS PRECURSOR PCDGT_BACLI CYCLOMALTODEXT BACILLUS LICHENIFORMIS  217-244  442-472  594-647 GLUCANOTRANS PRECURSOR PCDGT_BACOH CYCLOMALTODEXT BACILLUS OHBENSIS  430-471 GLUCANOTRANS PRECURSOR PCDGT_BACS0 CYCLOMALTODEXT BACILLUS SP  210-237  435-462  615-642 GLUCANOTRANS PRECURSOR PCDGT_BACS2 CYCLOMALTODEXT BACILLUS SP  409-471 GLUCANOTRANS PRECURSOR PCDGT_BACS3 CYCLOMALTODEXT BACILLUS SP  210-237  435-462  614-641 GLUCANOTRANS PRECURSOR PCDGT_BACSP CYCLOMALTODEXT BACILLUS SP  210-237  435-465  615-642 GLUCANOTRANS PRECURSOR PCDGT_BACSS CYCLOMALTODEXT BACILLUS SP  217-244  442-472  594-651 GLUCANOTRANS PRECURSOR PCDGT_BACST CYCLOMALTODEXT BACILLUS STEAROTHERMOPHILUS  586-646 GLUCANOTRANS PRECURSOR PCDGT_KLEPN CYCLOMALTODEXT KLEBSIELLA PNEUMONIAE  212-239 GLUCANOTRANS PRECURSOR PCEA1_ECOLI COLICIN E1 PROTEIN ESCHERICHIA COLI  44-71  285-326 PCEA1_SHISO COLICIN E1* PROTEIN SHIGELLA SONNEI  44-71  284-325  413-440 PCEA2_ECOLI COLICIN E2 ESCHERICHIA COLI  334-368 PCEA3_ECOLI COLICIN E3 ESCHERICHIA COLI  334-368 PCEA6_ECOLI COLICIN E6 ESCHERICHIA COLI  334-368 PCEAB_ECOLI COLICIN B ESCHERICHIA COLI  283-341 PCEAD_ECOLI COLICIN D ESCHERICHIA COLI  284-311 PCEAM_ECOLI COLICIN M ESCHERICHIA COLI  178-227 PCEAN_ECOLI COLICIN N ESCHERICHIA COLI  119-146  173-200 PCEA_CITFR COLICIN A CITROBACTER FREUNDII  228-258 PCEFD_STRCL ISOPENICILLIN N EPIMERASE STREPTOMYCES CLAVULIGERUS  370-397 PCEIA_ECOLI COLICIN IA PROTEIN ESCHERICHIA COLI  68-95  255-282  378-412  415-452 PCEIB_ECOLI COLICIN IB PROTEIN ESCHERICHIA COLI  68-95  255-282  378-412  415-452 PCELA_ACEXY UTP URIDYLYLTRANSFERASE ACETOBACTER XYLINUM  59-89 PCELA_ECOLI PROTEIN CELA ESCHERICHIA COLI  76-103 PCFAA_ECOLI CFA/1 FIMBRIAL SUBUNIT A ESCHERICHIA COLI  27-58 PRECURSOR PCFAC_ECOLI CFA/1 FIMBRIAL SUBUNIT C ESCHERICHIA COLI  138-187  388-456  561-595 PRECURSOR PCFAD_ECOLI CFA/1 FIMBRIAL SUBUNIT D ESCHERICHIA COLI  133-160 PCFAE_ECOLI CFA/1 FIMBRIAL SUBUNIT E ESCHERICHIA COLI  180-207  244-271 PCH10_ACYPS 10 KD CHAPERONIN ACRYTHOSIPHON PISUM  57-95 SYMBIOTIC BACTERIU PCH10_BACSU 10 KD CHAPERONIN BACILLUS SUBTILIS  66-93 PCH10_CHLTR 10 KD CHAPERONIN CHLAMYDIA TRACHOMATIS  64-91 PCH10_ECOLI 10 KD CHAPERONIN ESCHERICHIA COLI  57-84 PCH10_HAEDU 10 KD CHAPERONIN HAEMOPHILUS DUCREYI  68-95 PCH10_LEGMI 10 KD CHAPERONIN LEGIONELLA MICDADEI  57-84 PCH10_RICTS 10 KD CHAPERONIN RICKETTSIA TSUTSUGAMUSHI  65-92 PCH10_THEP3 10 KD CHAPERONIN THERMOPHILIC BACTERIUM PS-3  66-93 PCH60_ACYPS 60 KD CHAPERONIN ACYRTHOSIPHON PISUM  341-382 SYMBIOTIC BACTERIU PCH60_AGRTU 60 KD CHAPERONIN AGROBACTERIUM TUMEFACIENS  117-163  339-370  425-466 PCH60_AMOPS 60 KD CHAPERONIN AMOEBA PROTEUS SYMBIOTIC  299-333 BACTERIUM PCH60_BACSU 60 KD CHAPERONIN BACILLUS SUBTILIS  298-332  337-364 PCH60_BORBU 60 KD CHAPERONIN BORRELIA BURGDORFERI  125-163  299-368 PCH60_BRUAB 60 KD CHAPERONIN BRUCELLA ABORTUS  117-144  339-366 PCH60_CHLPN 60 KD CHAPERONIN CHLAMYDIA PNEUMONIAE   4-31 PCH60_CHLTR 60 KD CHAPERONIN CHLAMYDIA TRACHOMATIS   4-31 PCH60_CHRVI 60 KD CHAPERONIN CHROMATIUM VINOSUM  300-327 PCH60_CLOAB 60 KD CHAPERONIN CLOSTRIDIUM ACETOBUTYLICUM  238-332  337-364  455-482 PCH60_CLOPE 60 KD CHAPERONIN CLOSTRIDIUM PERFRINGENS  337-368  417-444 PCH60_COXBU 60 KD CHAPERONIN COXIELLA BURNETII  300-327  348-382 PCH60_HAEDU 60 KD CHAPERONIN HAEMOPHILUS DUCREYI  339-366  417-444 PCH60_LEGMI 60 KD CHAPERONIN LEGIONELLA MICDADEI  299-333 PCH60_LEGPN 60 KD CHAPERONIN LEGIONELLA PNEUMOPHILA  298-332  452-479 PCH60_MYCLE 60 KD CHAPERONIN MYCOBACTERIUM LEPRAE  125-152  236-263  337-364 PCH60_MYCTU 60 KD CHAPERONIN MYCOBACTERIUM TUBERCULOSIS  125-152  337-364 & BOVIS PCH60_PSEAE 60 KD CHAPERONIN PSEUDOMONAS AERUGINOSA  339-366 PCH60_RHILV 60 KD CHAPERONIN RHIZOBIUM LEGUMINOSARUM  117-163  322-370  425-466 PCH60_RICTS 60 KD CHAPERONIN RICKETTSIA TSUTSUGAMUSHI  103-130  293-336  360-394 PCH60_SYNP7 60 KD CHAPERONIN SYNECHOCOCCUS SP  308-335  337-380 PCH60_SYNY3 60 KD CHAPERONIN SYNECHOCYSTIS SP  338-365  455-489 PCH60_THEP3 60 KD CHAPERONIN THERMOPHILIC BACTERIUM PS-3  337-364 PCH62_STRAL 60 KD CHAPERONIN 2 STREPTOMYCES ALBUS G  116-148  337-364 PCHB_VIBHA N,N′-DIACETYLCHITOBIASE VIBRIO HARVEYI  21-48  772-799 PRECURSOR PCHEA_BACSU CHEMOTAXIS PROTEIN CHEA BACILLUS SUBTILIS  373-400  590-617 PCHEA_ECOLI CHEMOTAXIS PROTEIN CHEA ESCHERICHIA COLI  256-286 PCHEA_SALTY CHEMOTAXIS PROTEIN CHEA SALMONELLA TYPHIMURIUM  162-197 PCHER_BACSU CHEMOTAXIS PROTEIN BACILLUS SUBTILIS  124-151 METHYLTRANSFERASE PCHEW_ECOLI PURINE-BINDING CHEMO- ESCHERICHIA COLI  68-115 TAXIS PROTEIN PCHEW_SALTY PURINE-BINDING CHEMO- SALMONELLA TYPHIMURIUM  88-115 TAXIS PROTEIN PCHEY_ECOLI CHEMOTAXIS PROTEIN CHEY ESCHERICHIA COLI  22-49 PCHEY_SALTY CHEMOTAXIS PROTEIN CHEY SALMONELLA TYPHIMURIUM  22-49 PCHI1_BACCI CHITINASE A1 PRECURSOR BACILLUS CIRCULANS  491-518  566-593 PCHIA_ALTSO CHITINASE A PRECURSOR ALTEROMONAS SP  345-372 PCHIA_SERMA CHITINASE A PRECURSOR SERRATIA MARCESCENS  346-373 PCHID_BACCI CHITINASE D PRECURSOR BACILLUS CIRCULANS  102-161  189-216 PCHIT_SACER CHITINASE SACCHAROPOLYSPORA ERYTHRAEA  92-119 PCHIT_STRPL CHITINASE 63 PRECURSOR STREPTOMYCES PLICATUS  250-284 PCHMU_BACSU CHORISMATE MUTASE BACILLUS SUBTILIS   3-37 PCHOD_BREST CHOLESTEROL OXIDASE BREVIBACTERIUM STEROLICUM  263-290 PRECURSOR PCHTA_VIBCH CHOLERA ENTEROTOXIN, A VIBRIO CHOLERAE  79-106 CHAIN PRECURSOR PCHVA_AGRTU BETA-(1->2)GLUCAN EXPORT AGROBACTERIUM TUMEFACIENS   4-31  181-208 PROTEIN PCHVE_AGRTU RECEPTOR PROTEIN CHVE AGROBACTERIUM TUMEFACIENS  100-127 PRECURSOR PCIRI_CITFR CITROLYSIN PROTEIN I CITROBACTER FREUNDII  435-462 PCIRA_ECOLI COLICIN I RECEPTOR ESCHERICHIA COLI  146-173 PRECURSOR PCISA_BACSU PUTATIVE DNA BACILLUS SUBTILIS  378-405 RECOMBINASE PCISY_ACIAN CITRATE SYNTHASE ACINETOBACTER ANITRATUM  143-170 PCISY_BACCO CITRATE SYNTHASE BACILLUS COAGULANS  24-51 PCITA_SALTY CITRATE-PROTON SYMPORT SALMONELLA TYPHIMURIUM  154-181 PCITN_KLEPN CITRATE-SODIUM SYMPORT KLEBSIELLA PNEUMONIAE  194-221 PCITN_SALDU CITRATE-SODIUM SYMPORT SALMONELLA DUBLIN  194-221 PCITN_SALPU CITRATE-SODIUM SYMPORT SALMONELLA PULLORUM  194-221 PCLCA_PSEPU CHLOROCATECHOL 1,2- PSEUDOMONAS PUTIDA  13-36 DIOXYGENASE PCLD1_ECOLI CHAIN LENGTH DETER- ESCHERICHIA COLI  133-167 MINANT PROTEIN PCLD2_ECOLI CHAIN LENGTH DETER- ESCHERICHIA COLI  178-212  250-277 MINANT PROTEIN PCLD_SALTY CHAIN LENGTH DETER- SALMONELLA TYPHIMURIUM  96-127  151-212 MINANT PROTEIN PCLOS_CLOHI ALPHA-CLOSTRIPAIN CLOSTRIDIUM HISTOLYTICUM  30-58  497-524 PRECURSOR PCLPA_ECOLI ATP-BINDING SUBUNIT CLPA ESCHERICHIA COLI  655-695 PCLPA_RHOBL CLPA HOMOLOG PROTEIN RHODOPSEUDOMONAS BLASTICA  439-466 PCLPB_BACNO CLPB HOMOLOG PROTEIN BACTEROIDES NODOSUS  116-157  442-476  558-595 PCLPB_ECOLI CLPB PROTEIN ESCHERICHIA COLI  444-489  563-590 PCLPX_AZOVI CLPX HOMOLOG PROTEIN AZOTOBACTER VINELANDII  215-242  332-359 PCLPX_ECOLI ATP-BINDING SUBUNIT CLPX ESCHERICHIA COLI  255-282 PCN16_ECOLI 2′,3′-CYCLIC-NUC 2′- ESCHERICHIA COLI  50-77 PHOSPHODIESTERASE PRECURS PCODA_ECOLI CYTOSINE DEAMINASE ESCHERICHIA COLI  102-129 PCOM1_BACSU A COMPETENCE PROTEIN 1 BACILLUS SUBTILIS  108-135  186-213 PCOMQ_BACSU COMPETENCE REGULATORY BACILLUS SUBTILIS  154-239 PROTEIN PCOP6_STAAU COP-6 PROTEIN STAPHYLOCOCCUS AUREUS   7-53 PCOPB_PSESM COPPER RESISTANCE PSEUDOMONAS SYRINGAE  140-167 PROTEIN B PRECURSOR PCORA_ECOLI MAGNESIUM/COBALT ESCHERICHIA COLI  134-161 TRANSPORT PROTEIN CORA PCORA_SALTY MAGNESIUM/COBALT SALMONELLA TYPHIMURIUM  134-161 TRANSPORT PROTEIN CORA PCOTE_BACSU SPORE COAT PROTEIN E BACILLUS SUBTILIS  42-92 PCOX1_BRAJA CYTOCHROME C OXIDASE BRADYRHIZOBIUM JAPONICUM  380-407 POLYPEPTIDE I PCOX1_PARDE CYTOCHROME C OXIDASE PARACOCCUS DENITRIFICANS  383-410 POLYPEPTIDE I PCOX1_RHOSH CYTOCHROME C OXIDASE RHODOBACTER SPHAEROIDES  396-423 POLYPEPTIDE I PCOXX_BACFI OXIDASE ASSEMBLY FACTOR BACILLUS FIRMUS  36-63 PCOXX_BACSU OXIDASE ASSEMBLY FACTOR BACILLUS SUBTILIS  49-76 PCPPB_NEIGO CRYPTIC PLASMID PROTEIN B NEISSERIA GONORRHOEAE  72-99  165-209 PCPSB_ECOLI MANNOSE-1-PHOSPHATE ESCHERICHIA COLI  309-336 GUANYLYLTRANSFERASE PCPSB_SALTY MANNOSE-1-PHOSPHATE SALMONELLA TYPHIMURIUM  311-338 GUANYLYLTRANSFERASE PCPXA_ECOLI SENSOR PROTEIN CPXA ESCHERICHIA COLI  254-281 PCPXG_STRSQ CYTOCHROME P450 105C1 STREPTOMYCES SP  157-184 PCPXJ_SACER 6-DEOXYERYTHRONOLIDE B SACCHAROPOLYSPORA ERYTHRAEA  233-260 (DEB) HYDROXYLASE PCPXM_BACSU CYTOCHROME P450 109 BACILLUS SUBTILIS  240-283 PCPXN_ANASP PROBABLE CYTOCHROME ANABAENA SP  98-125 P450 PCR27_BACTI 27 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  153-187 PCR27_BACTM 27 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  153-187 PCR41_BACSH 1.9 KD INSECTICIDAL TOXIN BACILLUS SPHAERICUS  276-308 PCR42_BACSH 1.9 KD INSECTICIDAL TOXIN BACILLUS SPHAERICUS  276-308 PCR43_BACSH 41.9 KD INSECTICIDAL TOXIN BACILLUS SPHAERICUS  276-308 PCR70_BACTD 70 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  207-234  252-279  429-463 PCR70_BACTO 75 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  57-84  125-159  427-464 PCR70_BACTT 70 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  199-226  244-271  421-455 PCR71_BACTK 70 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  93-133  191-218  552-615 PCR72_BACTI 72 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  74-111  383-414 PCR72_BACTK 70 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  93-133  191-218  552-593 PCR77_BACTI 77 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  308-335  502-529 PCREC_ECOLI SENSOR PROTEIN CREC ESCHERICHIA COLI  103-130 PCRED_ECOLI INNER MEMBRANE PROTEIN ESCHERICHIA COLI  94-121 CRED PCRP_ECOLI CATABOLITE GENE ACTI- ESCHERICHIA COLI &  26-53  127-154 VATOR SHIGELLA FLEXNERI PCRP_SALTY CATABOLITE GENE ACTI- SALMONELLA TYPHIMURIUM  26-53  127-154 VATOR KLEBSIELLA AEROGENES PCRTI_ERWHE PHYTOENE DEHYDROGENASE ERWINIA HERBICOLA  231-258 PCRTI_RHOCA PHYTOENE DEHYDROGENASE RHODOBACTER CAPSULATUS  389-416 PCRTJ_RHOCA CRTJ PROTEIN RHODOBACTER CAPSULATUS  133-160  334-361  431-458 PCRYS_BACTA 132 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  721-755  875-902 PCRYS_BACTB 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  730-771  865-892 1053-1080 PCRYS_BACTE 133 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  736-770  890-917 PCRYS_BACTI 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  218-252  701-728  775-802 PCRYS_BACTK 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  737-771  865-892 1053-1080 PCRYS_BACTS 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  736-770  890-917 PCRYT_BACTA 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  730-771  865-892 1053-1080 PCRYT_BACTE 134 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  745-779  899-926 PCRYT_BACTI 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  217-251  354-384  701-728  775-802 PCRYT_BACTK 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  737-771  865-892 PCRYU_BACTA 135 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  736-770  890-917 PCRYU_BACTI 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  217-251  700-727  774-801 PCRYU_BACTK 131 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  738-772  866-893 1054-1081 PCRYV_BACTA 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  737-771  865-892 1053-1080 PCRYV_BACTI 135 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  110-151  745-772  819-846 PCRYV_BACTK 133 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  736-770  890-917 PCRYW_BACTA 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  745-779 PCRYW_BACTK 133 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  608-659  662-696  892-919 PCRYX_BACTK 139 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  92-119  227-254  605-632  783-817  937-964 PCS32_ECOLI CS3 PILI SYNTHESIS 63 KD ESCHERICHIA COLI  42-69  226-253  290-317  344-378 PROTEIN PCS33_ECOLI CS3 PILI SYNTHESIS 48 KD ESCHERICHIA COLI  90-117  154-181  208-242 PROTEIN PCS34_ECOLI CS3 PILI SYNTHESIS 33 KD ESCHERICHIA COLI  20-47  74-108 PROTEIN PCSG_HALHA CELL SURFACE GLYCOPRO- HALOBACTERIUM HALOBIUM  256-283  584-611 PROTEIN PRECURSOR PCSG_HALVO CELL SURFACE GLYCOPRO- HALOBACTERIUM VOLCANII  143-170  237-271 PROTEIN PRECURSOR PCSG_METFE CELL SURFACE GLYCOPRO- METHANOTHERMUS FERVIDUS  59-107 PROTEIN PRECURSOR PCSG_METSC CELL SURFACE GLYCOPRO- METHANOTHERMUS SOCIABILIS  59-107 PROTEIN PRECURSOR PCSOB_ECOLI CS1 FIMBRIAL SUBUNIT B ESCHERICHIA COLI  25-56 PRECURSOR PCTFA_CLOAB COA-TRANSFERASE SUBUNIT CLOSTRIDIUM ACETOBUTYLICUM  118-145 A PCTFB_CLOAB COA-TRANSFERASE SUBUNIT CLOSTRIDIUM ACETOBUTYLICUM  174-208 B PCTRB_NEIME INNER-MEMBRANE PROTEIN NEISSERIA MENINGITIDIS  152-193 CTRB PCTX_PSEAE CYTOTOXIN PRECURSOR PSEUDOMONAS AERUGINOSA  78-115  124-151  160-194  217-251 PCVAA_ECOLI COLICIN V SECRETION ESCHERICHIA COLI  104-138  163-219 PROTEIN CVAA PCVAB_ECOLI COLICIN V SECRETION ESCHERICHIA COLI  151-178 PROTEIN CVAB PCWPM_BACBR MIDDLE CELL WALL PROTEIN BACILLUS BREVIS  197-224  411-438 1010-1044 PRECURSOR PCWPO_BACBR OUTER CELL WALL PROTEIN BACILLUS BREVIS  178-216  560-587  947-988 PRECURSOR PCYAA_BORPE ADENYLATE CYCLASE BORDETELLA PERTUSSIS  48-75  632-659  962-996 PRECURSOR PCYAA_YERIN ADENYLATE CYCLASE YERSINIA INTERMEDIA  343-387  593-620 PCYAB_BORPE CYAB PROTEIN BORDETELLA PERTUSSIS  541-568 PCYAD_BORPE CYAD PROTEIN BORDETELLA PERTUSSIS  178-212 PCYAE_BORPE CYAE PROTEIN BORDETELLA PERTUSSIS  313-340 PCYB_RHOCA CYTOCHROME B RHODOBACTER CAPSULATUS  38-65 PCYDD_ECOLI TRANSPORT PROTEIN CYDD ESCHERICHIA COLI   3-30  382-409 PCYF_NOSSP APOCYTOCHROME F NOSTOC SP  209-243 CURSOR PCYMO_ACISP CYCLOHEXANONE MONO- ACINETOBACTER SP  439-473 OXYGENASE PCYNT_SYNP7 CARBONIC ANHYDRASE SYNECHOCOCCUS SP  170-200 PCYNX_ECOLI CYNX PROTEIN ESCHERICHIA COLI  53-80 PCYOB_ECOLI CYTOCHROME O UBIQUINOL ESCHERICHIA COLI  31-58 OXIDASE SUBUNIT 1 PCYPH_SYNP7 PEPTIDYL-PROLYL CIS-TRANS SYNECHOCOCCUS SP  107-141 ISOMERASE PCYSA_ECOLI SULFATE PERMEASE A ESCHERICHIA COLI  164-191 PROTEIN PCYSB_ECOLI CYS REGULON TRANS- ESCHERICHIA COLI   3-30 CRIPTIONAL ACTIVATOR PCYSB_SALTY CYS REGULON TRANS- SALMONELLA TYPHIMURIUM   3-30 CRIPTIONAL ACTIVATOR PCYSE_ECOLI SERINE ACETYL- ESCHERICHIA COLI  164-191 TRANSFERASE PCYSE_SALTY SERINE ACETYL- SALMONELLA TYPHIMURIUM  164-191 TRANSFERASE PCYSG_ECOLI SIROHEM SYNTHASE ESCHERICHIA COLI  405-432 PCYSG_SALTY SIROHEM SYNTHASE SALMONELLA TYPHIMURIUM  405-432 PCYSN_ECOLI SULFATE ADENYLATE ESCHERICHIA COLI  64-91 TRANSFERASE SUBUNIT 1 PCYSW_ECOLI SULFATE PERMEASE W ESCHERICHIA COLI  201-228 PROTEIN PCYSW_SYNP7 SULFATE PERMEASE W SYNECHOCOCCUS SP  211-238 PROTEIN PCZCB_ALCEU CATION EFFLUX SYSTEM ALCALIGENES EUTROPHUS  241-268  283-320  364-391 PROTEIN CZCB PCZCD_ALCEU CATION EFFLUX SYSTEM ALCALIGENES EUTROPHUS  139-169 PROTEIN CZCD PDACB_BACSU PENICILLIN-BINDING BACILLUS SUBTILIS  80-107 PROTEIN 5° PRECURSOR PDADA_ECOLI D-AMINO ACID DEHYDRO- ESCHERICHIA COLI  127-154 GENASE PDAGA_ALTHA NA(+)-LINKED D-ALANINE ALTEROMONAS HALOPLANKTIS  332-373 GLYCINE PERMEASE PDAMX_ECOLI DAMX PROTEIN ESCHERICHIA COLI  68-95  349-380 PDAPA_ECOLI DIHYDRODIPICOLINATE ESCHERICHIA COLI  27-54  157-194 SYNTHASE PDAT1_BACSU DNA-PROTEIN-CYSTEINE BACILLUS SUBTILIS  13-47 METHYLTRANSFERASE PDBHA_ECOLI DNA-BINDING PROTEIN HU- ESCHERICHIA COLI  12-39 ALPHA PDBH_CLOPA DNA-BINDING PROTEIN HU CLOSTRIDIUM PASTEURIANUM  12-53 PDCAM_ECOLI DECARBOXYLASE ESCHERICHIA COLI  146-173 ENZYME PDCDA_CORGL DIAMINOPIMELATE CORYNEBACTERIUM GLUTMICUM  134-161 DECARBOXYLASE PDCDA_PSEAE DIAMINOPIMELATE PSEUDOMONAS AERUGINOSA  57-84 DECARBOXYLASE PDCEB_ECOLI GLUTAMATE DECARBOXY- ESCHERICHIA COLI   4-31 LASE BETA PDCHS_ENTAE HISTIDINE DECARBOXYLASE ENTEROBACTER AEROGENES  111-138 PDCHS_KLEPL HISTIDINE DECARBOXYLASE KLEBSIELLA PLANTICOLA  111-138 PDCHS_MORMO HISTIDINE DECARBOXYLASE MORGANELA MORGANII  111-138 PDCID_BACSU DIPEPTIDE TRANSPORT BACILLUS SUBTILIS  188-222 PROTEIN DCIAD PDCLY_HAFAL LYSINE DECARBOXYLASE HAFNIA ALVEI  305-332 PDCOA_KLEPN OXALOACETATE DECARB- KLEBSIELLA PNEUMONIAE  261-288  342-369 OXYLASE ALPHA CHAIN PDCOA_SALTY OXALOACETATE DECARB- SALMONELLA TYPHIMURIUM  261-288  342-369 OXYLASE ALPHA CHAIN PDCOB_SALTY OXALOACETATE DECARB- SALMONELLA TYPHIMURIUM  299-326 OXYLASE BETA CHAIN PDCTB_RHILE TRANSPORT SENSOR RHIZOBIUM LEGUMINOSARUM  377-411 PROTEIN DCTB PDCTB_RHIME TRANSPORT SENSOR RHIZOBIUM MELILOTI  511-538 PROTEIN DCTB PDEAD_ECOLI ATP-DEPENDENT RNA ESCHERICHIA COLI  268-295  518-545 HELICASE DEAD PDEAD_KLEPN ATP-DEPENDENT RNA KLEBSIELLA PNEUMONIAE  267-294  519-546 HELICASE DEAD PDEDA_ECOLI DEDA PROTEIN ESCHERICHIA COLI  106-133 PDEGS_BACSU SENSOR PROTEIN DEGS BACILLUS SUBTILIS  31-70  75-159  292-327 PDEH2_MORSP HALOACETATE DEHALO- MORAXELLA SP  114-141 GENASE H-2 PDEOC_ECOLI DEOXYRIBOSE-PHOSPHATE ESCHERICHIA COLI  134-161 ALDOLASE PDHAL_PSEOL ALDEHYDE DEHYDRO- PSEUDOMONAS OLEOVORANS   6-33 GENASE PDHAS_BACSU ASPARTATE-SEMIALDEHYDE BACILLUS SUBTILIS  150-184 DEHYDROGENASE PDHAS_CORGL ASPARTATE-SEMIALDEHYDE CORYNEBACTERIUM GLUTMICUM  43-70  312-339 DEHYDROGENASE PDHAS_ECOLI ASPARTATE-SEMIALDEHYDE ESCHERICHIA COLI  229-256 DEHYDROGENASE PDHAS_VIBCH ASPARTATE-SEMIALDEHYDE VIBRIO CHOLERAE  309-336 DEHYDROGENASE PDHA_BACSH ALANINE DEHYDROGENASE BACILLUS SPHAERICUS  149-176 PDHA_BACST ALANINE DEHYDROGENASE BACILLUS STEAROTHERMOPHILUS  94-121 PDHE2_CLODI NAD-SPECIFIC GLUTAMATE CLOSTRIDIUM DIFFICILE  116-143 DEHYDROGENASE PDHE2_PEPAS D-SPECIFIC GLUTAMATE PEPTOSTREPTOCOCCUS  247-274  345-380 DEHYDROGENASE ASACCHAROLYTICUS PDHE3_SULSO GLUTAMATE DEHYDRO- SULFOLOBUS SOLFATARICUS   2-36 GENASE PDHE4_CORGL NADP-SPECIFIC GLUTAMATE CORYNEBACTERIUM GLUTMICUM  188-215  229-256 DEHYDROGENASE PDHGA_ACICA GLUCOSE DEHYDROGENASE- ACINETOBACTER CALCOACETICUS  10-59  190-217 A PDHGB_BACME GLUCOSE 1-DEHYDRO- BACILLUS MEGATERIUM  27-57 GENASE B PDHG_ECOLI GLUCOSE DEHYDROGENASE ESCHERICHIA COLI  436-463 PDHK1_STRVN KETOACYL REDUCASE 1 STREPTOMYCES VIOLACEORUBER  168-195 PDHLE_BACST LEUCINE DEHYDROGENASE BACILLUS STEAROTHERMOPHILUS  192-219 PDHLO_AGRT4 D-LYSOPINE DEHYDRO- AGROBACTERIUM TUMEFACIENS  317-344 GENASE PDHM1_METEX METHANOL DEHYDRO- METHYLOBACTERIUM  153-187  190-224 GENASE SUBUNIT 1 PREC EXTORQUENS PDHM1_METOR METHANOL DEHYDRO- METHYLBACTERIUM  153-187  190-224 GENASE SUBUNIT 1 PREC ORGANOPHILUM PDHM1_PARDE METHANOL DEHYDRO- PARACOCCUS DENITRIFICANS  195-222 GENASE SUBUNIT 1 PREC PDHNA_BACSP NADH DEHYDROGENASE BACILLUS SP  284-314 PDHNA_ECOLI NADH DEHYDROGENASE ESCHERICHIA COLI  180-214 PDHOM_BACSU HOMOSERINE DEHYDRO- BACILLUS SUBTILIS  73-107  406-433 GENASE PDHOM_CORGL HOMOSERINE DEHYDRO- CORYNEBACTERIUM GLUTMICUM  105-132 GENASE PDHPH_BACSH PHENYLALANINE DEHYDRO- BACILLUS SPHAERICUS  212-239 GENASE PDHSA_ECOLI SUCC DEHYDROGENASE ESCHERICHIA COLI  482-512 FLAVOPROTEIN SUBUNIT PDHSS_ANACY SOLUBLE HYDROGENASE 42 ANABAENA CYLINDRICA  86-113  130-168 KD SUBUNIT PDHSS_SYNP1 SOLUBLE HYDROGENASE, SYNECHOCOCCUS SP  133-160 SMALL SUBUNIT PDHTM_METME TRIMETHYLAMINE METHYLOTROPHUS METHYLO-  439-466 DEHYDROGENASE PHILUS PDING_ECOLI PROBABLE ATP-DEPENDENT ESCHERICHIA COLI  584-611 HELICASE DING PDIVB_BACSU DIVISION INITIATION BACILLUS SUBTILIS  54-82  114-141 PROTEIN PDLD3_PSEPU DIHYDROLIPOAMIDE PSEUDOMONAS PUTIDA  93-120 DEHYDROGENASE PDLDH_AZOVI LIPOAMIDE DEHYDRO- AZOTOBACTER VINELANDII  18-45  224-276 GENASE COMP (E3) PDLDH_BACST LIPOAMIDE DEHYDRO- BACILLUS STEAROTHERMOPHILUS  82-124 GENASE COMP (E3) PDLDH_BACSU LIPOAMIDE DEHYDRO- BACILLUS SUBTILIS  82-109 GENASE COMP (E3) PDLDH_ECOLI DIHYDROLIPOAMIDE ESCHERICHIA COLI  108-135 DEHYDROGENASE PDLDH_PSEFL DIHYDROLIPOAMIDE PSEUDOMONAS FLUORESCENS  124-151  223-275 DEHYDROGENASE PDMPN_PSEPU PHENOL HYDROXYLASE P3 PSEUDOMONAS PUTIDA  63-90 PROTEIN PDNA1_BACSU DNAK PROTEIN BACILLUS SUBTILIS  497-524  548-581 PDNA2_BASCU DNAK PROTEIN BACILLUS SUBTILIS  456-483 PDNAA_BACSU DNAA PROTEIN BACILLUS SUBTILIS  316-380 PDNAA_BORBU DNAA PROTEIN BORRELIA BURGDORFERI  182-216  248-275  341-387  436-463 PDNAA_BUCAP DNAA PROTEIN BUCHNERA APHIDICOLA  73-100  111-138  353-380 PDNAA_ECOLI DNAA PROTEIN ESCHERICHIA COLI  366-400 PDNAA_MICLU DNAA PROTEIN MICROCOCCUS LUTEUS  385-415 PDNAA_MYCCA DNAA PROTEIN MYCOPLASMA CAPRICOLUM   8-56  75-112  274-310  350-389 PDNAA_PROMI DNAA PROTEIN PROTEUS MIRABILIS  365-399 PDNAA_PSEPU DNAA PROTEIN PSEUDOMONAS PUTIDA  398-439 PDNAA_SPICI DNAA PROTEIN SPIROPLASMA CITRI  45-72  76-110  145-180 PDNAB_CHLTR DNAB-LIKE PROTEIN CHLAMYDIA TRACHOMATIS  312-353 PDNAB_ECOLI DNAB PROTEIN ESCHERICHIA COLI  82-109 PDNAB_SALTY DNAB PROTEIN SALMONELLA TYPHIMURIUM  82-109 PDNAC_ECOLI DNAC PROTEIN ESCHERICHIA COLI  146-190 PDNAK_BACME DNAK PROTEIN BACILLUS MEGATERIUM  497-524  548-581 PKNAK_BORBU DNAK PROTEIN BORRELIA BURGDORFERI  512-594 PDNAK_BRUOV DNAK PROTEIN BRUCELLA OVIS  248-275  512-546 PDNAK_CAUCR DNAK PROTEIN CAULOBACTER CRESCENTUS  561-588 PDNAK_CLOAB DNAK PROTEIN CLOSTRIDIUM ACETOBUTYLICUM  499-526 PDNAK_CLOPE DNAK PROTEIN CLOSTRIDIUM PERFRINGENS  496-527 PDNAK_METMA DNAK PROTEIN METHANOSARCINA MAZEI  523-550 PDNAK_MYCTU DNAK PROTEIN MYCOBACTERIUM TUBERCULOSIS  502-529 PDNAK_STRCO DNAK PROTEIN STREPTOMYCES COELICOLOR  45-72  533-572 PDNIR_ECOLI REGULATORY PROTEIN DNIR ESCHERICHIA COLI  114-141 PDNLI_ZYMMO DNA LIGASE ZYMOMONAS MOBILIS  658-712 PDNRJ_STRPE TRANSDUCTION PROTEIN STREPTOMYCES PEUCETIUS  24-51 DNRJ PDOCK_SULSO PROBABLE SIGNAL RECOG- SULFOLOBUS SOLFATARICUS  104-172 NITION PARTICLE PROTE PDP3A_BACSU DNA POLYMERASE III, BACILLUS SUBTILIS  58-85  417-444 1382-1416 ALPHA CHAIN PDP3A_ECOLI DNA POLYMERASE III, ESCHERICHIA COLI  77-104 ALPHA CHAIN PDP3A_SACER DNA POLYMERASE III, SACCHAROPOLYSPORA ERYTHRAEA  230-257 ALPHA CHAIN PDP3A_SALTY DNA POLYMERASE III, SALMONELLA TYPHIMURIUM  77-104 ALPHA CHAIN PDP3B_BACSU DNA POLYMERASE III, BETA BACILLUS SUBTILIS  212-239 CHAIN PDP3B_BORBU DNA POLYMERASE III, BETA BORRELIA BURGDORFERI  266-313 CHAIN PDP3B_BUCAP DNA POLYMERASE III, BETA BUCHNERA APHIDICOLA  31-62  308-359 CHAIN PDP3B_MICLU DNA POLYMERASE III, BETA MICROCOCCUS LUTEUS  191-218 CHAIN PDP3B_MYCCA DNA POLYMERASE III, BETA MYCOPLASMA CAPRICOLUM  36-70 CHAIN PDP3B_PSEPU DNA POLYMERASE III, BETA PSEUDOMONAS PUTIDA  30-60 CHAIN PDP3B_SPICI DNA POLYMERASE III, BETA SPIROPLASMA CITRI  78-112  129-177  273-310 CHAIN PDP3X_BACSU DNA POLYMERASE III SUB- BACILLUS SUBTILIS  231-272 UNITS AND GAMMA AND TAU PDPC2_ECOLI DNA PRIMASE TRAC-2 ESCHERICHIA COLI  691-743 PDPC4_ECOLI DNA PRIMASE TRAC-4 ESCHERICHIA COLI  401-448 PDPND_STRPN DPND PROTEIN STREPTOCOCCUS PNEUMONIAE  79-120 PDPO1_BACCA DNA POLYMERASE I BACILLUS CALDOTENOX  208-235 PDPO1_STRPN DNA POLYMERASE I STREPTOCOCCUS PNEUMONIAE  198-225  398-425  571-598  645-672 PDPO1_THEAQ DNA POLYMERASE THERMUS AQUATICUS  196-223  602-629 PDPO1_THEFL DNA POLYMERASE THERMUS AQUATICUS  597-628 PDPO2_ECOLI DNA POLYMERASE II ESCHERICHIA COLI  569-596 PDPOL_PYRFU DNA POLYMERASE PYROCOCCUS FURIOSUS  746-773 PDPOL_SULSO DNA POLYMERASE SULFOLOBUS SOLFATARICUS  379-406  436-463  625-659  747-774 PDPOL_THELI DNA POLYMERASE THERMOCOCCUS LITORALIS  332-370  551-589  892-926 1004-1031 1153-1194 PDPP_LACLA DIPEPTIDYL PEPTIDASE IV LACTOCOCCUS LACTIS  716-753 PDPP_LACLC DIPEPTIDYL PEPTIDASE IV LACTOCOCCUS LACTIS  716-753 PDPS_ECOLI DNA PROTECTION DURING ESCHERICHIA COLI   4-45 STARVATION PROTEIN PDRN1_STREQ DEOXYRIBONUCLEASE STREPTOCOCCUS EQUISIMILIS  33-60  291-318 PRECURSOR PDRRA_STRPE DAUNORUBICIN RESISTANCE STREPTOMYCES PEUCETIUS  286-313 ATP-BINDING PROTEIN PDYRA_STAAU DIHYDROFOLATE STAPHYLOCOCCUS AUREUS  62-89 REDUCTASE TYPE I PE13B_BACCI GLUCAN ENDO-1,3-BETA- BACILLUS CIRCULANS  134-161  305-339  424-451 GLUCOSIDASE A1 PREC PEAE_ECOLI ATTACHING AND EFFACING ESCHERICHIA COLI  66-100  158-185  525-552  691-725  802-836  871-905 PROTEIN PEBGR_ECOLI EBG OPERON REPRESSOR ESCHERICHIA COLI  151-178 PROTEIN PEBR_STAAU ETHIDIUM BROMIDE RESIS- STAPHYLOCOCCUS AUREUS  68-98 TANCE PROTEIN PECHH_RHOCA ENOYL-COA HYDRATASE RHODOBACTER CAPSULATUS  222-249 HOMOLOG PECPD_ECOLI CHAPERONE PROTEIN ECPD ESCHERICHIA COLI  20-47 PRECURSOR PEDD_ZYMMO PHOSPHOGLUCONATE ZYMOMONAS MOBILIS  12-39 DEHYDRATASE PEDIN_STAAU EPIDERMAL CELL DIF INH STAPHYLOCOCCUS AUREUS  52-79  119-146 PRECURSOR PEF2_DESMO ELONGATION FACTOR 2 DESULFUROCOCCUS MOBILIS  427-461 PEF2_HALHA ELONGATION FACTOR 2 HALOBACTERIUM HALOBIUM  186-213 PEF2_METVA ELONGATION FACTOR 2 METHANOCOCCUS VANNIELII  409-436 PEF2_SULAC ELONGATION FACTOR 2 SULFOLOBUS ACIDOCALDARIUS  36-63  145-180 PEF2_THEAC ELONGATION FACTOR 2 THERMOPLASMA ACIDOPHILUM  13-40  49-76  220-247 PEFG_ANANI ELONGATION FACTOR G ANACYSTIS NIDULANS  332-359 PEFG_ECOLI ELONGATION FACTOR G ESCHERICHIA COLI  234-261 PEFG_MYCLE ELONGATION FACTOR G MYCOBACTERIUM LEPRAE  211-259  330-357 PEFG_SALTY ELONGATION FACTOR G SALMONELLA TYPHIMURIUM  234-261 PEFG_SPIPL ELONGATION FACTOR G SPIRULINA PLATENSIS  334-374  481-511 PEFG_SYNY3 ELONGATION FACTOR G SYNECHOCYSTIS SP  14-41 PEFT1_STRRA ELONGATION FACTOR TU1 STREPTOMYCES RAMOCISSIMUS  221-258 PEFT2_STRRA ELONGATION FACTOR TU2 STREPTOMYCES RAMOCISSIMUS  221-258 PEFT3_STRRA ELONGATION FACTOR TU3 STREPTOMYCES RAMOCISSIMUS  228-255 PEFTS_ECOLI ELONGATION FACTOR EF-TS ESCHERICHIA COLI  101-135 PEFTS_SPICI ELONGATION FACTOR EF-TS SPIROPLASMA CITRI  27-54  134-161 PEFTU_BACFR ELONGATION FACTOR TU BACTEROIDES FRAGILIS  18-45  229-256 PEFTU_BACSU ELONGATION FACTOR TU BACILLUS SUBTILIS  11-45  230-257 PEFTU_BURCE ELONGATION FACTOR TU BURKHOLDERIA CEPACIA  26-53 PEFTU_CHLTR ELONGATION FACTOR TU CHLAMYDIA TRACHOMATIS  218-245 PEFTU_DEISP ELONGATION FACTOR TU DEINONEMA SP  230-257 PEFTU_FLESI ELONGATION FACTOR TU FLEXISTIPES SINUSARABICI  221-248 PEFTU_HALMA ELONGATION FACTOR TU HALOARCULA MARISMORTUI   4-31 PEFTU_MICLU ELONGATION FACTOR TU MICROCOCCUS LUTEUS  221-248 PEFTU_MYCHO ELONGATION FACTOR TU MYCOPLASMA HOMINIS  222-249 PEFTU_MYCLE ELONGATION FACTOR TU MYCOBACTERIUM LEPRAE  220-257 PEFTU_MYCTU ELONGATION FACTOR TU MYCOBACTERIUM TUBERCULOSIS  220-247 PEFTU_SHEPU ELONGATION FACTOR TU SHEWANELLA PUTREFACIENS  26-53 PEFTU_STROR ELONGATION FACTOR TU STREPTOCOCCUS ORALIS  232-259 PELAS_PSEAE PSEUDOLYSIN PRECURSOR PSEUDOMONAS AERUGINOSA  141-168 PELT1_ECOLI T-LABILE ENTEROTOXIN A ESCHERICHIA COLI  78-105 CHAIN PRECURSOR PELT3_ECOLI T-LABILE ENTEROTOXIN A ESCHERICHIA COLI  79-106 CHAIN PRECURSOR PELTB_CLOPE T-LABILE ENTEROTOXIN B CLOSTRIDIUM PERFRINGENS  228-269 CHAIN PRECURSOR PENTD_ECOLI ENTEROBACTIN SYNTHETASE ESCHERICHIA COLI  154-188 COMPONENT D PENVM_SALTY ENVM PROTEIN SALMONELLA TYPHIMURIUM  34-61 PEPIB_STAEP 117 KD MEMBRANE ASSOCI- STAPHYLOCOCCUS EPIDERMIDIS  51-80  125-229  290-325  387-421  857-889 ATED PROTEIN PEPIC_STAEP EPIDERMIN BIOSYNTHESIS STAPHYLOCOCCUS EPIDERMIDIS  411-447 PROTEIN EPIC PEPIP_STAEP SERINE PROTEASE EPIP STAPHYLOCOCCUS EPIDERMIDIS   7-68  297-324 PRECURSOR PEPIY_STAEP HYPOTHETICAL 16.7 KD STAPHYLOCOCCUS EPIDERMIDIS  70-101 PROTEIN IN EPIA 5′ REGION PEPIZ_STAEP HYPOTHETICAL PROTEIN IN STAPHYLOCOCCUS EPIDERMIDIS  42-100 EPIA 5′ REGION PERA_ECOLI GTP-BINDING ERA PROTEIN ESCHERICHIA COLI  18-45 PERBS_SACER SENSORY TRANSDUCTION SACCHAROPOLYSPORA ERYTHRAEA  209-243 PROTEIN ERYC1 PEREA_ECOLI ERYTHROMYCIN ESTERASE ESCHERICHIA COLI  37-64  143-170 TYPE 1 PERY3_SACER ERYTHRONOLIDE SYNTHASE, SACCHAROPOLYSPORA ERYTHRAEA   9-36  967-994 1117-1144 MODULES 5 AND 6 PESTA_STRSC ESTERASE PRECURSOR STREPTOMYCES SCABIES  128-155 PESTE_PSEFL ARYLESTERASE PSEUDOMONAS FLUORESCENS  162-189 PETC1_STAAU ENTEROTOXIN TYPE C-1 STAPHYLOCOCCUS AUREUS  76-117  155-206 PRECURSOR PETC2_STAAU ENTEROTOXIN TYPE C-2 STAPHYLOCOCCUS AUREUS  76-117  155-206 PRECURSOR PETC3_STAAU ENTEROTOXIN TYPE C-3 STAPHYLOCOCCUS AUREUS  76-117  155-206 PRECURSOR PETXA_STAAU ENTEROTOXIN TYPE A STAPHYLOCOCCUS AUREUS  26-69  165-192 PRECURSOR PETXB_CLOPE EPSILON-TOXIN, TYPE B CLOSTRIDIUM PERFRINGENS  209-236 PRECURSOR PETXB_STAAU ENTEROTOXIN TYPE B STAPHYLOCOCCUS AUREUS  64-101  173-207 PRECURSOR PETXD_STAAU ENTEROTOXIN TYPE D STAPHYLOCOCCUS AUREUS  153-200 PRECURSOR PETXE_STAAU ENTEROTOXIN TYPE E STAPHYLOCOCCUS AUREUS  26-69  88-115 PRECURSOR PEUTC_SALTY ENTHANOLAMINE AMMONIA- SALMONELLA TYPHIMURIUM  116-150 LYASE LIGHT CHAIN PEVGA_ECOLI PUTATIVE TRANSCRIPTION ESCHERICHIA COLI  62-89 REG EVGA PEVGS_ECOLI PUTATIVE SENSOR PROTEIN ESCHERICHIA COLI  45-79  249-276  431-458  526-553  829-856 EVGS PEX5B_ECOLI EXODEOXYRIBONUCLEASE V ESCHERICHIA COLI  226-253 PEXBB_ECOLI BIOPOLYMER TRANSPORT ESCHERICHIA COLI  80-107 EXBB PROTEIN PEXOA_RHIME SUCCINOGLYCAN BIO- RHIZOBIUM MELILOTI  180-207 SYNTHESIS PROTEIN EXOA PEXOA_STRPN EXODEOXYRIBONUCLEASE STREPTOCOCCUS PNEUMONIAE  218-254 PEXOF_RHIME EXOF PROTEIN RHIZOBIUM MELILOTI  236-270  327-361 PEXOH_RHIME SUCCINOGLYCAN BIO- RHIZOBIUM MELILOTI  252-279 SYNTHESIS PROTEIN EXOH PEXOP_RHIME SUCCINOGLYCAN BIO- RHIZOBIUM MELILOTI  211-242  272-299  350-391 SYNTHESIS PROTEIN EXOP PFADB_ECOLI FATTY OXIDATION COMPLEX ESCHERICHIA COLI  36-63  177-204 ALPHA SUBUNIT PFADL_ECOLI FATTY ACID TRANSPORT ESCHERICHIA COLI  220-247 PROTEIN PRECURSOR PFAED_ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA COLI  223-257  421-453  507-541 FAED PRECURSOR PFAEF_ECOLI K88 MINOR FIMBRIAL SUB- ESCHERICHIA COLI  18-48 UNIT PRECURSOR PFAND_ECOLI FAND PROTEIN PRECURSOR ESCHERICHIA COLI  160-194  386-423  596-623  730-757 PFANE_ECOLI CHAPERONE PROTEIN FANE ESCHERICHIA COLI  22-58 PRECURSOR PFANG_ECOLI FANG PROTEIN PRECURSOR ESCHERICHIA COLI  104-131 PFANH_ECOLI FANH PROTEIN PRECURSOR ESCHERICHIA COLI  83-141 PFAOB_PSERF FATTY OXIDATION COMPLEX PSEUDOMONAS FRAGI   8-42  295-322 ALPHA SUBUNIT PFDHD_WOLSU FDHD PROTEIN WOLINELLA SUCCINOGENES  64-98 PFDHF_ECOLI FORMATE DEHYDROGENASE ESCHERICHIA COLI  613-640 PFDH_PSESR FORMATE DEHYDROGENASE PSEUDOMONAS SP  49-76  366-393 PFDNG_ECOLI FORMATE DEHYDROGENASE ESCHERICHIA COLI  288-315  323-350  696-730 PFECA_ECOLI TRANSPORT PROTEIN FECA ESCHERICHIA COLI  531-561 PRECURSOR PFECC_ECOLI TRANSPORT PROTEIN 1, ESCHERICHIA COLI  210-237 CYTOSOLIC PFECI_ECOLI FECI PROTEIN ESCHERICHIA COLI  131-158 PFEMB_STAAU POSSIBLE PROTEIN FEMB STAPHYLOCOCCUS AUREUS  22-56 PFENR_SYNP2 FERREDOXIN-NADP SYNECHOCOCCUS SP   4-31 REDUCTASE PFEPC_ECOLI FERRIC ENTEROBACTIN ESCHERICHIA COLI  176-203 TRANSPORT PROTEIN FEPC PFEPE_ECOLI FERRIC ENTEROBACTIN ESCHERICHIA COLI  182-234  281-308 TRANSPORT PROTEIN FEPE PFEPG_ECOLI FERRIC ENTEROBACTIN ESCHERICHIA COLI  128-155 TRANSPORT PROTEIN FEPG PFERH_ANASP FERREDOXIN, HETEROCYST ANABAENA SP   2-29 PFERX_ANASP FERRODOXIN-LIKE PROTEIN ANABAENA SP  67-94 IN NIF REGION PFHAB_BORPE FILAMENTOUS HEMAG- BORDETELLA PERTUSSIS 1128-1158 1359-1386 2063-2114 2841-2868 3051-3085 3167-3194 GLUTININ PFHAC_BORPE HAEMOLYSIN-LIKE BORDETELLA PERTUSSIS  342-369 PROTEIN FHAC PRECURSOR PFHLA_ECOLI FORMATE HYDROGENLYASE ESCHERICHIA COLI  36-63  350-384  401-428 TRANSACTIVATOR PFHUA_ECOLI FERRICHROME-IRON ESCHERICHIA COLI  458-485 RECEPTOR PRECURSOR PFHUB_ECOLI PROTEIN FHUB PRECURSOR ESCHERICHIA COLI  227-254 PFHUE_ECOLI OUTER-MEMBRANE ESCHERICHIA COLI  587-614 RECEPTOR PFIB_SPICI FIBRIL PROTEIN SPIROPLASMA CITRI  161-195  326-367 PFIC_ECOLI CELL FILAMENTATION ESCHERICHIA COLI  151-178 PROTEIN FIC PFIC_SALTY CELL FILAMENTATION SALMONELLA TYPHIMURIUM  151-178 PROTEIN FIC PFIMC_BORPE OUTER MEMBRANE PROTEIN BORDETELLA PERTUSSIS  208-235  540-567  618-645 FIMC PRECURSOR PFIMC_ECOLI CHAPERONE PROTEIN FIMC ESCHERICHIA COLI  51-78 PRECURSOR PFIMD_ECOLI FIMD PROTEIN PRECURSOR ESCHERICHIA COLI  222-253  458-485  534-561  563-590 PFIME_ECOLI TYPE 1 FIMBRIAE REGULA- ESCHERICHIA COLI  165-192 TORY PROTEIN FIME PFIMY_SALTY FIMBRIAE Y PROTEIN SALMONELLA TYPHIMURIUM  49-76 PFIMZ_ECOLI FIMBRIAE Z PROTEIN ESCHERICHIA COLI  42-69  162-192  196-230 PFIMZ_SALTY FIMBRIAE Z PROTEIN SALMONELLA TYPHIMURIUM  175-209 PFINQ_ECOLI FINQ PROTEIN ESCHERICHIA COLI  145-172 PFIRA_RICRI FIRA PROTEIN RICKETTSIA RICKETTSII  162-189 PFIXC_AZOCA FIXC PROTEIN AZORHIZOBIUM CAULINODANS  129-156 PFIXL_AZOCA SENSOR PROTEIN FIXL AZORHIZOBIUM CAULINODANS  247-274 PFIXL_BRAJA SENSOR PROTEIN FIXL BRADYRHIZOBIUM JAPONICUM  27-54  253-280 PFLA1_BORBU FLAGELLAR FILAMENT 41 KD BORRELIA BURGDORFERI   8-35  271-298 CORE PROTEIN PFLA1_HALHA FLAGELLIN A1 PRECURSOR HALOBACTERIUM HALOBIUM  63-92  157-184 PFLA1_METVO FLAGELLIN B1 PRECURSOR METHANOCOCCUS VOLTAE  28-73  133-160 PFLA2_METVO FLAGELLIN B2 PRECURSOR METHANOCOCCUS VOLTAE  28-66 PFLA3_HALHA FLAGELLIN B1 PRECURSOR HALOBACTERIUM HALOBIUM  36-63 PFLA3_METVO FLAGELLIN B3 PRECURSOR METHANOCOCCUS VOLTAE  35-76 PFLA4_HALHA FLAGELLIN B2 PRECURSOR HALOBACTERIUM HALOBIUM  36-90  157-184 PFLA5_HALHA FLAGELLIN B3 PRECURSOR HALOBACTERIUM HALOBIUM  36-63  154-181 PFLA6_BACSU FLAA LOCUS 22.9 KD BACILLUS SUBTILIS  73-149  155-186 PRECURSOR PFLAA_COMCO FLAGELLIN A CAMPYLOBACTER COLI  15-42  144-191  497-535 PFLAA_CAMJE FLAGELLIN A CAMPYLOBACTER JEJUNI  220-266  310-337  500-538 PFLAA_METVO FLAGELLIN A PRECURSOR METHANOCOCCUS VOLTAE  28-62 PFLAA_PSEAE FLAGELLIN PSEUDOMONAS AERUGINOSA   3-41  51-88  97-124 PFLAA_RHIME FLAGELLIN RHIZOBIUM MELILOTI  181-219  228-265  360-391 PFLAA_SPIAU FLAGELLAR FILAMENT SPIROCHAETA AURANTIA  162-189 PROTEIN PRECURSOR PFLAA_TREHY FLAGELLAR FILAMENT TREPONEMA HYODYSENTERIAE  55-89  219-285 PROTEIN PRECURSOR PFLAA_(—)TREPA FLAGELLAR FILAMENT TREPONEMA PALLIDUM  243-270 OUTER LAYER PROTEIN PFLAB_CAMCO FLAGELLIN B CAMPYLOBACTER COLI  144-191  497-535 PFLAB_CAMJE FLAGELLIN B CAMPYLOBACTER JEJUNI  220-266  310-337  500-538 PFLAB_RHIME FLAGELLIN RHIZOBIUM MELILOTI  86-113  177-219  228-255  360-391 PFLAV_CLOMP FLAVODOXIN CLOSTRIDIUM MP  18-52 PFLAY_CAUCR REGULATORY PROTEIN FLAY CAULOBACTER CRESCENTUS  291-318  551-578 PFLA_BACSU FLAGELLIN BACILLUS SUBTILIS  102-129  228-255 PFLGG_BACSU FLAGELLAR BASAL-BODY BACILLUS SUBTILIS  62-89 ROD PROTEIN FLGG PFLGK_SALTY FLAGELLAR HOOK- SALMONELLA TYPHIMURIUM  12-50  333-360  456-540 ASSOCIATED PROTEIN 1 PFLGL_ECOLI FLAGELLAR HOOK- ESCHERICHIA COLI  61-105  229-266 ASSOCIATED PROTEIN 3 PFLGL_SALTY FLAGELLAR HOOK- SALMONELLA TYPHIMURIUM  61-105  229-266 ASSOCIATED PROTEIN 3 PFLHD_ECOLI FLAGELLAR TRANSCRIP- ESCHERICHIA COLI   6-33 TIONAL ACTIVATOR FLHD PFLIA_PSEAE FLAGELLAR OPERON RNA PSEUDOMONAS AERUGINOSA  198-232 POL SIGMA FACTOR PFLIC_ECOLI FLAGELLIN ESCHERICHIA COLI   3-41  186-213  295-329  431-466 PFLIC_SALCH FLAGELLIN SALMONELLA CHOLERAE-SUIS   5-41  54-125  136-198 PFLIC_SALMU FLAGELLIN SALMONELLA MUENCHEN   5-41  54-88  136-177  232-259  272-299  376-403 PFLIC_SALPA FLAGELLIN SALMONELLA PARATYPHI-A   5-41  54-125  136-184 PFLIC_SALRU FLAGELLIN SALMONELLA RUBISLAW   5-41  54-125  136-196 PFLIC_SALTY FLAGELLIN SALMONELLA TYPHIMURIUM   5-41  54-125  136-200 PFLIC_SERMA FLAGELLIN SERRATIA MARCESCENS  15-42  55-89  103-130  137-164  275-321 PFLID_ECOLI FLAGELLAR HOOK- ESCHERICHIA COLI  32-66  106-133  160-187  216-298  386-445 ASSOCIATED PROTEIN 2 PFLID_SALTY FLAGELLAR HOOK- SALMONELLA TYPHIMURIUM  32-66  106-133  255-299  407-438 ASSOCIATED PROTEIN 2 PFLIE_BACSU FLAG HOOK-BASAL BACILLUS SUBTILIS   8-35 BODY PROTEIN FLIE PFLIF_BACSU FLAGELLAR M-RING BACILLUS SUBTILIS  327-361  391-418 PROTEIN PFLIF_CAUCR FLAGELLAR M-RING CAULOBACTER CRESCENTUS  24-51  297-324  361-388 PROTEIN PFLIF_SALTY FLAGELLAR M-RING SALMONELLA TYPHIMURIUM  484-529 PROTEIN PFLIG_BACSU FLAGELLAR SWITCH BACILLUS SUBTILIS  35-62 PROTEIN FLIG PFLIG_ECOLI FLAGELLAR SWITCH ESCHERICHIA COLI  44-71 PROTEIN FLIG PFLIH_BACSU PROBABLE FLIH PROTEIN BACILLUS SUBTILIS  19-46  105-132 PFLIJ_BACSU FLAGELLAR FLIJ PROTEIN BACILLUS SUBTILIS   7-37 PFLIJ_SALTY FLAGELLAR FLIJ PROTEIN SALMONELLA TYPHIMURIUM  75-118 PFLIK_BACSU PROBABLE FLIK PROTEIN BACILLUS SUBTILIS  77-104  117-144 PFLIL_BACSU FLIL PROTEIN BACILLUS SUBTILIS  30-71  78-105  109-136 PFLIL_ECOLI FLIL PROTEIN ESCHERICHIA COLI  105-132 PFLIL_SALTY FLIL PROTEIN SALMONELLA TYPHIMURIUM  103-133 PFLIM_BACSU FILM PROTEIN BACILLUS SUBTILIS  148-175 PFLIM_ECOLI FILM PROTEIN ESCHERICHIA COLI  251-278 PFLIN_CAUCR FLAGELLAR MOTOR SWITCH CAULOBACTER CRESCENTUS  56-83 PROTEIN PFLIS_ECOLI FLAGELLAR PROTEIN FLIS ESCHERICHIA COLI  59-86 PFLIT_SALTY FLAGELLAR PROTEIN FLIT SALMONELLA TYPHIMURIUM   9-46  67-106 PFM12_PSEAE FIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA  30-67  80-114 PRECURSOR PFM1A_ECOLI TYPE-1 FIMBRIAL PROTEIN, ESCHERICHIA COLI   5-32 A CHAIN PRECURSOR PFM1C_ECOLI TYPE-1 FIMBRIAL PROTEIN, ESCHERICHIA COLI  11-38 C CHAIN PRECURSOR PFM1_ACTVI FIMBRIAL SUBUNIT TYPE 1 ACTINOMYCES VISCOSUS  248-282  352-379  417-444 PRECURSOR PFM98_ECOLI FIMBRIAL PROTEIN 987P ESCHERICHIA COLI  114-141 PRECURSOR PFMA0_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  110-137 PRECURSOR PFMA1_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  107-134 PRECURSOR PFMA2_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  107-134 PRECURSOR PFMA7_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  110-137 PRECURSOR PFMAA_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  123-150 PRECURSOR PFMAF_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  107-141 PRECURSOR PFMAH_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  95-122 PRECURSOR PFMAI_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  111-145 PRECURSOR PFMAJ_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  96-123 PRECURSOR PFMCD_PSEAE FIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA  70-97 PRECURSOR PFMDD_BACNO POSSIBLE FIMBRIAL BACTEROIDES NODOSUS  106-144  355-382 ASSEMBLY PROTEIN FIMD PFMDH_BACNO POSSIBLE FIMBRIAL BACTEROIDES NODOSUS  106-144  355-382 ASSEMBLY PROTEIN FIMD PFMF3_ECOLI F17 FIMBRIAL PROTEIN ESCHERICHIA COLI  97-124 PRECURSOR PFMM1_NEIME FIMBRIAL PROTEIN NEISSERIA MENINGITIDIS  70-97 PRECURSOR PFMM2_NEIGO FIMBRIAL PROTEIN NEISSERIA GONORRHOEAE  66-97 PRECURSOR PFMM_MORNO FIMBRIAL PROTEIN MORAXELLA NONLIQUEFACIENS  108-146 PRECURSOR PFMP1_PSEAE FIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA  30-67  80-114 PRECURSOR PFMP3_PSEAE FIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA  70-97 PRECURSOR PFMS1_ECOLI CS1 FIMBRIAL SUBUNIT A ESCHERICHIA COLI  60-87  112-139 PRECURSOR PFMS3_ECOLI CS3 FIMBRIAL SUBUNIT A ESCHERICHIA COLI  49-98 PRECURSOR PFM_HAEIN MAJOR FIMBRIAL SUBUNIT HAEMOPHILUS INFLUENZAE  102-129 PRECURSOR PFNBA_STAAU FIBRONECTIN-BINDING STAPHYLOCOCCUS AUREUS  41-83  188-215  311-365  431-458  517-555  652-686  722-756 PROTEIN PRECURSOR PFOLC_ECOLI FOLYPOLYGLUTAMATE ESCHERICHIA COLI  125-159 SYNTHASE PFOLC_LACCA FOLYPOLYGLUTAMATE LACTOBACILLUS CASEI  129-156 SYNTHASE PFPG_BACFI FORMAMIDOPYRIMIDINE- BACILLUS FIRMUS  153-180 DNA GLYCOSYLASE PFRDA_ECOLI FUMARATE REDUCTASE ESCHERICHIA COLI  395-422 FLAVOPROTEIN SUBUNIT PFRDA_WOLSU FUMARATE REDUCTASE WOLINELLA SUCCINOGENES   8-35  487-514 FLAVOPROTEIN SUBUNIT PFRZE_MYXXA GLIDING MOTILITY REGULA- MYXOCOCCUS XANTHUS  15-42  478-505 TORY PROTEIN PFTHS_CLOTH FORMATE--TETRAHYDRO- CLOSTRIDIUM THERMOACETUM  163-190 FOLATE LIGASE PFTR_METTH FORMYLTRANSFERASE METHANOBACTERIUM   9-43 THERMOAUTOTROPHICU PFTSA_BACSU CELL DIVISION PROTEIN BACILLUS SUBTILIS  76-110 FTSA PFTSA_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI  301-338  375-418 FTSA PFTSJ_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI   4-31 FTSJ PFTSL_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI  63-90 FTSL PFTSN_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI  151-188 FTSN PFTSX_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI  278-305 FTSX PFTSY_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI  230-260 FTSY PFUCR_ECOLI L-FUCOSE OPERON ESCHERICHIA COLI   7-45 ACTIVATOR PFUMA_BACST FUMARATE HYDRATASE BACILLUS STEAROTHERMOPHILUS  290-317 CLASS I, AEROBIC PFUMH_BACSU FUMARATE HYDRATASE BACILLUS SUBTILIS  414-445 PFUR_YERPE FERRIC UPTAKE REGULA- YERSINIA PESTIS  99-130 TION PROTEIN PG3P1_ECOLI GLYC 3-PHOS DEHYDRO- ESCHERICHIA COLI  302-329 GENASE A PG3P2_ANAVA GLYC 3-PHOS DEHYDRO- ANABAENA VARIABILIS  87-114 GENASE 2 PG3P3_ANAVA GLYC 3-PHOS DEHYDRO- ANABAENA VARIABILIS  162-189 GENASE 3 PG3P3_ECOLI GLYC 3-PHOS DEHYDRO- ESCHERICHIA COLI  236-324 GENASE C PG3P_BACME GLYC 3-PHOS DEHYDRO- BACILLUS MEGATERIUM  49-76  237-271 GENASE PG3P_BACSU GLYC 3-PHOS DEHYDRO- BACILLUS SUBTILIS  49-76 GENASE PG3P_PYRWO GLYC 3-PHOS DEHYDRO- PYROCOCCUS WOESEI  259-286 GENASE PG3P_THEMA GLYC 3-PHOS DEHYDRO- THERMOTOGA MARITIMA  290-328 GENASE PG6PB_BACST GLUCOSE-6-PHOSPHATE BACILLUS STEAROTHERMOPHILUS  103-143  241-268 ISOMERASE B PG6PD_ECOLI GLUCOSE-6-PHOSPHATE ESCHERICHIA COLI  301-328 1-DEHYDROGENASE PG6PD_ZYMMO GLUCOSE-6-PHOSPHATE ZYMOMONAS MOBILIS  165-192 1-DEHYDROGENASE PGACA_PSEFL CYANIDE CONTROL PROTEIN PSEUDOMONAS FLUORESCENS  178-205 PGAL1_SALTY GALACTOKINASE SALMONELLA TYPHIMURIUM  86-113 PGAL7_HAEIN GAL-1-PHOS URIDYLYL- HAEMOPHILUS INFLUENZAE  124-158  239-269 TRANSFERASE PGAL7_LACHE GAL-1-PHOS URIDYLYL- LACTOBACILLUS HELVETICUS  304-338 TRANSFERASE PGALF_SALTY GALACTOSE OPERON SALMONELLA TYPHIMURIUM  53-91 REPRESSOR PGALR_HAEIN GALACTOSE OPERON HAEMOPHILUS INFLUENZAE  182-209 REPRESSOR PGAL_PSEFL DE D-GALACTOSE 1- PSEUDOMONAS FLUORESCENS  251-278 DEHYDROGENASE PGCH2_ECOLI GTP CYCLOHYDROLASE II ESCHERICHIA COLI  78-105 PGCH2_PHOLE GTP CYCLOHYDROLASE II PHOTOBACTERIUM LEIOGNATHI  197-227  246-273 PGCSH_ECOLI GLYCINE CLEAVAGE SYSTEM ESCHERICHIA COLI  10-37 H PROTEIN PGCSP_ECOLI GLYCINE DEHYDROGENASE ESCHERICHIA COLI  216-246 PGCVA_ECOLI GLYCINE CLEAVAGE SYSTEM ESCHERICHIA COLI  60-94 TRANSACTIVATOR PGENK_ECOLI PROTEIN K ESCHERICHIA COLI  24-51 PGER1_BACSU SPORE GERMINATION BACILLUS SUBTILIS  49-83  182-216  350-384 PROTEIN I PGER3_BACSU SPORE GERMINATION BACILLUS SUBTILIS  293-323 PROTEIN III PRECURSOR PGERE_BACSU GERMINATION PROTEIN BACILLUS SUBTILIS  13-40 GERE PGGI2_STAHA ANTIBACTERIAL PROTEIN 2 STAPHYLOCOCCUS HAEMO-   6-33 LYTICUS PGGI3_STAHA ANTIBACTERIAL PROTEIN 3 STAPHYLOCOCCUS HAEMO-   6-33 LYTICUS PGIDA_BACSU GLUCOSE INHIBITED BACILLUS SUBTILIS  396-423 DIVISION PROTEIN A PGIDA_ECOLI GLUCOSE INHIBITED ESCHERICHIA COLI  533-568 DIVISION PROTEIN A PGIDA_PSEPU GLUCOSE INHIBITED PSEUDOMONAS PUTIDA  539-566 DIVISION PROTEIN A PGIDB_BACSU GLUCOSE INHIBITED BACILLUS SUBTILIS  34-61 DIVISION PROTEIN B PGIDB_PSEPU GLUCOSE INHIBITED PSEUDOMONAS PUTIDA  25-52 DIVISION PROTEIN B PGLCP_SYNY3 GLUCOSE TRANSPORT SYNECHOCYSTIS SP  288-322 PROTEIN PGLDA_BACST GLYCEROL DEHYDRO- BACILLUS STEAROTHERMOPHILUS  20-79 GENASE PGLGA_ECOLI GLYCOGEN SYNTHASE ESCHERICHIA COLI  256-283 PGLGC_ECOLI GLUCOSE-1-PHOSPHATE ESCHERICHIA COLI  114-141 ADENYLYLTRANSFERASE PGLGC_SALTY GLUCOSE-1-PHOSPHATE SALMONELLA TYPHIMURIUM  114-141 ADENYLYLTRANSFERASE PGLMS_ECOLI GLUC--FRUC-6-PHOSAMINO- ESCHERICHIA COLI  209-243 TRANSFERASE PGLN1_METTL GLNB-LIKE PROTEIN 1 METHANOCOCCUS  58-85 THERMOLITHOTROPHICUS PGLNA_ANASP GLUTAMINE SYNTHETASE ANABAENA SP   8-42 PGLNA_BACSU GLUTAMINE SYNTHETASE BACILLUS SUBTILIS   4-31 PGLNA_CLOAB GLUTAMINE SYNTHETASE CLOSTRIDIUM ACETOBUTYLICUM  413-440 PGLNA_ECOLI GLUTAMINE SYNTHETASE ESCHERICHIA COLI  144-171 PGLNA_METVO GLUTAMINE SYNTHETASE METHANOCOCCUS VOLTAE  203-230 PGLNA_PROVU GLUTAMINE SYNTHETASE PROTEUS VULGARIS  142-169 PGLNA_PYRFU GLUTAMINE SYNTHETASE PYROCOCCUS FURIOSUS  391-421 PGLNA_SALTY GLUTAMINE SYNTHETASE SALMONELLA TYPHIMURIUM  144-171 PGLNA_STRCO GLUTAMINE SYNTHETASE STREPTOMYCES COELICOLOR  186-213 PGLNB_AZOBR NITROGEN REGULATORY AZOSPIRILLUM BRASILENSE  15-49 PROTEIN P-II PGLNB_RHOCA NITROGEN REGULATORY RHODOBACTER CAPSULATUS  15-49 PROTEIN P-II PGLNB_SYNP6 NITROGEN REGULATORY SYNECHOCOCCUS SP  52-79 PROTEIN P-II PGLND_ECOLI UDP URIDYLYLTRANSFERASE ESCHERICHIA COLI  120-147  151-178 PGLND_SALTY UDP URIDYLYLTRANSFERASE SALMONELLA TYPHIMURIUM  151-178 PGLNE_ECOLI ADENYLYLTRANSFERASE ESCHERICHIA COLI  103-130  433-460  763-790 PGLNH_ECOLI GLUTAMINE-BINDING ESCHERICHIA COLI  126-153 PROTEIN PRECURSOR PGLNQ_BACST GLUTAMINE PERMEASE BACILLUS STEAROTHERMOPHILUS   7-34 OPERON PROTEIN GLNQ PGLPD_BACSU AEROBIC GLYC-3-PHOS BACILLUS SUBTILIS  194-230 DEHYDROGENASE PGLPD_ECOLI AEROBIC GLYC-3-PHOS ESCHERICHIA COLI  410-437 DEHYDROGENASE PGLPF_BACSU GLYCEROL UPTAKE FACILI- BACILLUS SUBTILIS  235-274 TATOR PROTEIN PGLPK_BACSU GLYCEROL KINASE BACILLUS SUBTILIS  44-93 PGLPK_ECOLI GLYCEROL KINASE ESCHERICHIA COLI  56-90 PGLPR_ECOLI GLYCEROL-3-PHOSPHATE ESCHERICHIA COLI   5-32 REGULON REPRESSOR PGLPX_ECOLI GLPX PROTEIN ESCHERICHIA COLI  297-324 PGLPX_SHIFL GLPX PROTEIN SHIGELLA FLEXNERI  297-324 PGLRX_ECOLI GLUTAREDOXIN ESCHERICHIA COLI  24-51 PGLTB_ECOLI GLUTAMATE SYNTHASE ESCHERICHIA COLI  482-509 PGLTP_ECOLI PROTON GLUTAMATE ESCHERICHIA COLI  319-346 SYMPORT PROTEIN PGLVB_ECOLI PHOSPHOTRANSFERASE ESCHERICHIA COLI  130-157 ENZYME TYPE-IIB PGLYA_BRAJA SERINE HYDROXYMETHYL- BRADYRHIZOBIUM JAPONICUM  29-60 TRANSFERASE PGLYA_CAMJE SERINE HYDROXYMETHYL- CAMPYLOBACTER JEJUNI  376-403 TRANSFERASE PGLYA_HYPME SERINE HYDROXYMETHYL- HYPHOMICROBIUM METHYL-  28-55 TRANSFERASE OVORUM PGMG7_BACSU COMG OPERON PROTEIN 7 BACILLUS SUBTILIS  37-67  88-122 PGNTK_BACSU GLUCONOKINASE BACILLUS SUBTILIS  238-271 PGP1D_CHLTR VIRULENCE PROTEIN PGP1-D CHLAMYDIA TRACHOMATIS  312-353 PGP2D_CHLTR VIRULENCE PROTEIN PGP2-D CHLAMYDIA TRACHOMATIS  97-131 PGP5D_CHLTR VIRULENCE PROTEIN PGP5-D CHLAMYDIA TRACHOMATIS  25-52 PGP6D_CHLTR VIRULENCE PROTEIN PGP6-D CHLAMYDIA TRACHOMATIS  63-106  193-220 PGP7D_CHLTR VIRULENCE PROTEIN PGP7-D CHLAMYDIA TRACHOMATIS  12-60 PGP8D_CHLTR VIRULENCE PROTEIN PGP8-D CHLAMYDIA TRACHOMATIS  94-121 PGREA_RICPR TRANSCRIPTION ELONGA- RICKETTSIA PROWAZEKII  15-49 TION FACTOR GREA PGRPE_BACSU GRPE-LIKE PROTEIN BACILLUS SUBTILIS  27-73 PGRPE_BORBU GRPE-LIKE PROTEIN BORRELIA BURGDORFERI   2-79 PGRPE_CLOAB GRPE-LIKE PROTEIN CLOSTRIDIUM ACETOBUTYLICUM  12-83 PGRSA_BACBR GRAMICIDIN S SYNTHETASE BACILLUS BREVIS  545-572  799-826  840-882 1035-1062 PGRSB_BACBR GRAMICIDIN S SYNTHETASE BACILLUS BREVIS  48-75  94-121  241-282 1126-1153 1213-1240 2162-2189 2559-2586 2819-2846 3606-3633 II PGSH1_ECOLI GLUTAMATE-CYSTEINE ESCHERICHIA COLI  239-266  274-301 LIGASE PGSHR_ECOLI GLUTATHIONE REDUCTASE ESCHERICHIA COLI  100-134  270-311 PGSHR_PSEAE GLUTATHIONE REDUCTASE PSEUDOMONAS AERUGINOSA  80-114 PGSIA_BACSU STARVATION-INDUCIBLE BACILLUS SUBTILIS  74-101  265-296 PROTEIN A PGSPD_ERWCA PROTEIN D PRECURSOR ERWINIA CAROTOVORA  258-285  516-543  589-619 PGSPD_ERWCH PROTEIN D PRECURSOR ERWINIA CHRYSANTHEMI  259-302  307-338  551-578  659-686 PGSPD_KLEPN PROTEIN D PRECURSOR KLEBSIELLA PNEUMONIAE  259-286 PGSPE_ERWCA PROTEIN E ERWINIA CAROTOVORA  329-367 PGSPE_ERWCH PROTEIN E ERWINIA CHRYSANTHEMI  329-367 PGSPE_KLEPN PROTEIN E KLEBSIELLA PNEUMONIAE  323-361 PGSPE_PSEAE PROTEIN E PSEUDOMONAS AERUGINOSA  122-149  331-369 PGSPF_XANCP PROTEIN F XANTHOMONAS CAMPESTRIS  230-257 PGSPH_PSEAE PROTEIN H PRECURSOR PSEUDOMONAS AERUGINOSA  18-59 PGSPI_AERHY PROTEIN I PRECURSOR AEROMONAS HYDROPHILA  27-61 PGSPI_ERWCA PROTEIN I PRECURSOR ERWINIA CAROTOVORA  35-62 PGSPJ_KLEPN PROTEIN J PRECURSOR KLEBSIELLA PNEUMONIAE  140-167 PGSPK_ERWCA PROTEIN K ERWINIA CAROTOVORA  28-55 PGSPK_ERWCH PROTEIN K ERWINIA CHRYSANTHEMI  28-55 PGSPK_KLEPN PROTEIN K KLEBSIELLA PNEUMONIAE  72-99 PGSPK_PSEAE PROTEIN K PSEUDOMONAS AERUGINOSA  262-289 PGSPL_ERWCH PROTEIN L ERWINIA CHRYSANTHEMI   7-42  248-286  331-358 PGSPL_XANCP PROTEIN L XANTHOMONAS CAMPESTRIS  39-73  297-324 PGSPM_ERWCA PROTEIN M ERWINIA CAROTOVORA  108-145 PGSQD_ERWCH PROTEIN D PRECURSOR ERWINIA CHRYSANTHEMI  259-302  448-475  546-573  657-684 PGTF1_STRDO GLUCOSYLTRANSFERASE-I STREPTOCOCCUS DOWNEI  42-69  177-204  212-239  464-491 1382-1416 1495-1529 PRECURSOR PGTF2_STRDO GLUCOSYLTRANSFERASE-I STREPTOCOCCUS DOWNEI  171-198  206-233  458-485 1382-1412 1497-1524 PRECURSOR PGTFA_STRMU GLUCOSYLTRANSFERASE-S STREPTOCOCCUS MUTANS  297-350 PGTFB_STRMU GLUCOSYLTRANSFERASE-I STREPTOCOCCUS MUTANS  42-93  110-137  161-188  199-246  313-347  592-627 PRECURSOR PGTFC_STRMU GLUCOSYLTRANSFERASE-SI STREPTOCOCCUS MUTANS   4-40  110-138  235-262  330-361  614-653 PRECURSOR PGTFS_STRDO GLUCOSYLTRANSFERASE-S STREPTOCOCCUS DOWNEI  275-316  436-463 1281-1315 PRECURSOR PGTMR_METTF POSSIBLE G-T MISMATCHES METHANOBACTERIUM  80-107  148-175 REPAIR ENZYME THERMOFORMICICUM PGUAA_BACSU GMP SYNTHASE BACILLUS SUBTILIS  314-348  399-436  478-505 PGUAA_ECOLI GMP SYNTHASE ESCHERICHIA COLI  105-132 PGUB_BACCI BETA-GLUCANASE BACILLUS CIRCULANS  164-191 PRECURSOR PGUB_BACLI BETA-GLUCANASE BACILLUS LICHENIFORMIS  132-166 PRECURSOR PGUB_BACMA BETA-GLUCANASE BACILLUS MACERANS  126-160 PRECURSOR PGUN1_BACS4 ENDOGLUCANASE A BACILLUS SP  18-49 PGUN1_BACSU ENDOGLUCANASE BACILLUS SUBTILIS  270-304  376-403 PRECURSOR PGUN1_BUTFI ENDOGLUCANASE 1 BUTYRIVIBRIO FIBRISOLVENS  154-181  452-495 PGUN2_BACSU ENDOGLUCANASE BACILLUS SUBTILIS  270-304 PRECURSOR PGUN2_THEFU ENDOGLUCANASE E-2 THERMOMONOSPORA FUSCA  201-228 PRECURSOR PGUN3_BACS4 ENDOGLUCANASE C BACILLUS SP  110-137  348-378  538-565 PRECURSOR PGUN3_BACSU ENDOGLUCANASE BACILLUS SUBTILIS  270-304 PRECURSOR PGUN3_FIBSU ENDOGLUCANASE 3 FIBROBACTER SUCCINOGENES  542-586 PRECURSOR PGUN4_THEFU ENDOGLUCANASE E-4 THERMOMONOSPORA FUSCA  308-342 PRECURSOR PGUN5_THEFU ENDOGLUCANASE E-5 THERMOMONOSPORA FUSCA  44-71 PRECURSOR FGUNA_BACLA ENDOGLUCANASE A BACILLUS LAUTUS  410-437  454-481 PRECURSOR PGUNA_CLOTM ENDOGLUCANASE A CLOSTRIDIUM THERMOCELLUM  354-384 PRECURSOR PGUNA_PSEFL ENDOGLUCANASE A PSEUDOMONAS FLUORESCENS  762-789 PRECURSOR PGUNA_RUMAL ENDOGLUCANASE A RUMINOCOCCUS ALBUS  294-321 PGUNA_RUMFL CELLODEXTRINASE A RUMINOCOCCUS FLAVEFACIENS  276-303 PGUNB_BACLA ENDOGLUCANASE B BACILLUS LAUTUS  375-450 PRECURSOR PGUNB_CALSA ENDOGLUCANASE B CALDOCELLUM SACCHAROLYTI-  151-182  444-478 CUM PGUNB_CELFI ENDOGLUCANASE B CELLULOMONAS FIMI  266-293 PRECURSOR PGUNB_CLOCL ENDOGLUCANASE B CLOSTRIDIUM CELLULOVORANS  144-171  266-300 PRECURSOR PGUNB_CLOTM ENDOGLUCANASE B CLOSTRIDIUM THERMOCELLUM  514-541 PRECURSOR PGUNC_CELFI ENDOGLUCANASE C CELLULOMONAS FIMI  881-908 PRECURSOR PGUNC_PSEFL ENDOGLUCANASE C PSEUDOMONAS FLUORESCENS  52-82 PRECURSOR PGUND_CLOCE ENDOGLUCANASE D CLOSTRIDIUM CELLULOLYTICUM  382-453 PRECURSOR PGUND_CLOCL ENDOGLUCANASE D CLOSTRIDIUM CELLULOLYTICUM  145-172  271-298 PRECURSOR PGUNE_CLOTM ENDOGLUCANASE E CLOSTRIDIUM THERMOCELLUM  158-185  207-234  284-311 PRECURSOR PGUNH_CLOTM ENDOGLUCANASE H CLOSTRIDIUM THERMOCELLUM  46-73  425-452 PRECURSOR PGUNS_ERWCA ENDOGLUCANASE ERWINIA CAROTOVORA  20-47  115-149 PRECURSOR PGUNX_CLOTM PUTATIVE ENDOGLUCANASE CLOSTRIDIUM THERMOCELLUM  105-139 X PGUNZ_CLOSR ENDOGLUCANASE Z CLOSTRIDIUM STERCORARIUM  296-326  522-549 PRECURSOR PGUN_BACPO ENDOGLUCANASE BACILLUS POLYMYXA  198-225 PGUN_BACS1 ENDOGLUCANASE BACILLUS SP  321-348 PRECURSOR PGUN_BACS6 ENDOGLUCANASE BACILLUS SP  198-229  501-528  623-664 PRECURSOR PGUTD_ECOLI SORBITOL-6-PHOSPHATE 2- ESCHERICHIA COLI  138-165 DEHYDROGENASE PGVP1_HALHA GAS VESICLE PROTEIN, HALOBACTERIUM HALOBIUM  36-63 PLASMID PGVP2_HALHA GAS VESICLE PROTEIN, HALOBACTERIUM HALOBIUM  36-63 CHROMOSOMAL PGVPA_APHFL GAS VESICLE PROTEIN APHANIZOMENON FLOS-AQUAE   4-31  39-66 PGVPA_FREDI GAS VESICLE PROTEIN FREMYELLA DIPLOSIPHON   4-31  39-66 PGVPA_HALME GAS VESICLE PROTEIN HALOBACTERIUM MEDITERRANEI  37-64 PGVPA_MICBC GAS VESICLE PROTEIN MICROCYSTIS SP  39-66 PGVPA_PSEAN GAS VESICLE PROTEIN PSEUDONANABAENA SP   4-31  39-66 PGVPC_APHFL GAS VESICLE PROTEIN C APHANIZOMENON FLOS-AQUAE   8-49 PGVPC_HALHA GAS VESICLE PROTEIN C HALOBACTERIUM HALOBIUM  150-249 PGVPC_HALME GAS VESICLE PROTEIN C HALOBACTERIUM MEDITERRANEI  139-169 PGVPD_HALHA GVPD PROTEIN, PLASMID HALOBACTERIUM HALOBIUM  110-147 PGVPD_HALME GVPD PROTEIN HALOBACTERIUM MEDITERRANEI  110-147 PGVPF_HALHA GVPF PROTEIN, PLASMID HALOBACTERIUM HALOBIUM  13-47  135-169 PGVPF_HALME GVPF PROTEIN HALOBACTERIUM MEDITERRANEI  13-47 PGVPF_HALSA GVPF PROTEIN HALOBACTERIUM SALINARIUM   8-49 PGVPF_HALHA GVPG PROTEIN, PLASMID HALOBACTERIUM HALOBIUM  38-65 PGVPG_HALME GVPG PROTEIN HALOBACTERIUM MEDITERRANEI  38-72 PGVPH_HALHA GVPH PROTEIN HALOBACTERIUM HALOBIUM  10-40 PGVPI_HALME GVPI PROTEIN HALOBACTERIUM MEDITERRANEI   5-32 PGVPK_HALHA GVPK PROTEIN HALOBACTERIUM HALOBIUM  45-76 PGVPK_HALME GVPK PROTEIN HALOBACTERIUM MEDITERRANEI  12-39  47-74 PGVPK_HALSA GVPK PROTEIN HALOBACTERIUM SALINARIUM  11-38  50-77 PGVPL_HALME GVPL PROTEIN HALOBACTERIUM MEDITERRANEI  44-78 PGVPN_HALHA GVPN PROTEIN HALOBACTERIUM HALOBIUM  113-140 PGVPN_HALME GVPN PROTEIN HALOBACTERIUM MEDITERRANEI  15-56 PGVPG_HALME GVPG PROTEIN HALOBACTERIUM MEDITERRANEI  69-96  105-132 PGYRA_BACSU DNA GYRASE SUBUNIT A BACILLUS SUBTILIS  380-407  429-499 PGYRA_CAMJE DNA GYRASE SUBUNIT A CAMPYLOBACTER JEJUNI  267-310  381-408  452-479  665-695 PGYRA_ECOLI DNA GYRASE SUBUNIT A ESCHERICHIA COLI  266-293  449-497 PGYRA_KLEPN DNA GYRASE SUBUNIT A KLEBSIELLA PNEUMONIAE  266-293  448-496  518-545 PGYRA_MYCPN DNA GYRASE SUBUNIT A MYCOPLASMA PNEUMONIAE   4-31 PGYRA_STAAU DNA GYRASE SUBUNIT A STAPHYLOCOCCUS AUREUS  129-156  346-373  430-479  647-674  812-839 PGYRB_BACSU DNA GYRASE SUBUNIT B BACILLUS SUBTILIS  198-239 PGYRB_BORBU DNA GYRASE SUBUNIT B BORRELIA BURGDORFERI  154-181 PGYRB_ECOLI DNA GYRASE SUBUNIT B ESCHERICHIA COLI  616-643 PGYRB_HALSQ DNA GYRASE SUBUNIT B HALOFERAX SP  230-257 PGYRB_MYCPN DNA GYRASE SUBUNIT B MYCOPLASMA PNEUMONIAE  249-283 PGYRB_NEIGO DNA GYRASE SUBUNIT B NEISSERIA GONORRHOEAE  524-558  618-645 PGYRB_PSEPU DNA GYRASE SUBUNIT B PSEUDOMONAS PUTIDA  122-149  684-711 PGYRB_SPICI DNA GYRASE SUBUNIT B SPIROPLASMA CITRI  40-74  189-238  283-310  341-368  540-579 PGYRB_STAAU DNA GYRASE SUBUNIT B STAPHYLOCOCCUS AUREUS  252-279  291-318 PHDHA_ECOLI 7-ALPHA-HYDROXYSTEROID ESCHERICHIA COLI  71-98 DEHYDROGENASE PHELD_ECOLI HELICASE IV ESCHERICHIA COLI  100-134  529-556 PHEL_HAEIN LIPROPROTEIN E PRECURSOR HAEMOPHILUS INFLUENZAE  58-85 PHEM1_CHLVI GLUTAMYL-TRNA CHLOROBIUM VIBRIOFORMES  232-259 REDUCTASE PHEM1_ECOLI GLUTAMYL-TRNA ESCHERICHIA COLI  289-316 REDUCTASE PHEM1_RHOSH 5-AMINOLEVULINIC ACID RHODOBACTER SPHAEROIDES  73-100 SYNTHASE PHEM1_SALTY GLUTAMYL-TRNA SALMONELLA TYPHIMURIUM  289-316  344-371 REDUCTASE( PHEM1_SYNY3 GLUTAMYL-TRNA SYNECHOCYSTIS SP  163-190  350-377 REDUCTASE PHEM2_METSC DELTA-AMINOLEVULINIC METHANOTHERMUS SOCIABILIS  131-158 ACID DEHYDRATASE PHEM4_BACSU PUTATIVE UROPORPHYRINO- BACILLUS SUBTILIS  10-37 GEN-III SYNTHASE PHEM4_ECOLI UROPORPHYRINOGEN-III ESCHERICHIA COLI  211-238 SYNTHASE PHEMM_ECOLI HEMM PROTEIN ESCHERICHIA COLI  147-174 PHEMR_YEREN HEMIN RECEPTOR YERSINIA ENTEROCOLITICA  234-261 PRECURSOR PHEMX_ECOLI PUTATIVE METHYL- ESCHERICHIA COLI  69-138  185-219 TRANSFERASE PHEMY_BACSU HEMY PROTEIN BACILLUS SUBTILIS  217-262 PHEMZ_BACSU FERROCHELATASE BACILLUS SUBTILIS  199-226 PHETA_ANASP HETEROCYST DIFFERENTIA- ANABAENA SP  184-211  357-398  521-565 TION PROTEIN PHEXA_STRPN DNA MISMATCH REPAIR STREPTOCOCCUS PNEUMONIAE  426-460 PROTEIN HEXA PHEXB_STRPN DNA MISMATCH REPAIR STREPTOCOCCUS PNEUMONIAE  470-497 PROTEIN HEXB PHFAB_CAUCR POS TRANSACTIVATOR CAULOBACTER CRESCENTUS  98-125 PROTEIN HFAB PHFLC_ECOLI HFLC PROTEIN ESCHERICHIA COLI  113-140 PHFLX_ECOLI GTP-BINDING PROTEIN HFLX ESCHERICHIA COLI  169-196 PHFQ_ECOLI HOST FACTOR-1 PROTEIN ESCHERICHIA COLI  24-51 PHIFC_HAEIN PILIATION PROTEIN HIFC HAEMOPHILUS INFLUENZAE  356-383  404-431  447-474 PRECURSOR PHIS2_LACLA PHOSPHORIBOSYL-AMP LACTOCOCCUS LACTIS  126-174 CYCLOHYDROLASE PHIS4_ECOLI P-5-A CARBOXAMIDE ESCHERICHIA COLI  125-159 RIBOTIDE PHIS4_LACLA P-5-A CARBOXAMIDE LACTOCOCCUS LACTIS  49-89  181-228 RIBOTIDE PHIS4_METVA P-5-A CARBOXAMIDE METHANOCOCCUS VANNIELII  115-142 RIBOTIDE PHIS4_SALTY P-5-A CARBOXAMIDE SALMONELLA TYPHIMURIUM  125-159 RIBOTIDE PHIS5_LACLA AMIDOTRANSFERASE HISH LACTOCOCCUS LACTIS   7-34 PHIS6_ECOLI HISF PROTEIN ESCHERICHIA COLI  39-66  142-169 PHIS6_SALTY HISF PROTEIN SALMONELLA TYPHIMURIUM  39-66  142-169 PHIS7_ECOLI IMIDAZOLEGLYCEROL- ESCHERICHIA COLI  168-199 PHOSPHATE DEHYDRATASE PHIS7_SALTY IMIDAZOLEGLYCEROL- SALMONELLA TYPHIMURIUM  161-199 PHOSPHATE DEHYDRATASE PHIS8_ECOLI HISTIDINOL-PHOSPHATE ESCHERICHIA COLI  290-317 AMINOTRANSFERASE PHIS8_HALVO HISTIDINOL-PHOSPHATE HALOBACTERIUM VOLCANII  174-201 AMINOTRANSFERASE PHIS8_LACLA HISTIDINOL-PHOSPHATE LACTOCOCCUS LACTIS  161-188 AMINOTRANSFERASE PHIS8_SALTY HISTIDINOL-PHOSPHATE SALMONELLA TYPHIMURIUM  293-320 AMINOTRANSFERASE PHISQ_SALTY HISTIDINE PERMEASE SALMONELLA TYPHIMURIUM   8-35 MEMBRANE Q PROTEIN PHISX_ECOLI HISTIDINOL DEHYDRO- ESCHERICHIA COLI  393-434 GENASE PHISX_LACLA HISTIDINOL DEHYDRO- LACTOCOCCUS LACTIS  19-46  264-303 GENASE PHISX_MYCSM HISTIDINOL DEHYDRO- MYCOBACTERIUM SMEGMATIS  288-329  399-430 GENASE PHISX_SALTY HISTIDINOL DEHYDRO- SALMONELLA TYPHIMURIUM  393-434 GENASE PHLA_STAAU ALPHA-HEMOLYSIN STAPHYLOCOCCUS AUREUS  69-103 PRECURSOR PHLY1_ECOLI HEMOLYSIN A, CHROMO- ESCHERICHIA COLI   5-32  76-103  161-224  234-261  353-380  458-492  554-581  642-728 SOMAL PHYL2_ECOLI HAEMOLYSIN SECRETION ESCHERICHIA COLI  487-514 PROTEIN, CHROMOSOMA PHLY4_ECOLI HEMOLYSIN D, CHROMO- ESCHERICHIA COLI  103-133  178-215  223-331 SOMAL PHLYA_ACTPL HEMOLYSIN ACTINOBACILLUS PLEURO-   5-39  136-170  184-218  273-300  350-377  459-500  846-924 PNEUMONIAE PHLYA_ACTSU HEMOLYSIN ACTINOBACILLUS SUIS   5-39  136-170  184-218  273-300  350-377  459-527  846-924 PHLYA_ECOLI HEMOLYSIN A, PLASMID ESCHERICHIA COLI   5-32  76-103  161-262  354-381  452-493  555-582  643-729 PHLYA_PROMI HEMOLYSIN PRECURSOR PROTEUS MIRABILIS  165-196  299-338  356-400  425-471  498-525  528-576  610-695  705-742  747-774  789-823  841-868  966-993 1113-1140 1166-1193 1225-1273 1301-1342 1391-1461 1483-1527 PHLYA_SERMA HEMOLYSIN PRECURSOR SERRATIA MARCESCENS  311-345  477-504  558-585  625-703  718-745  830-864 1081-1108 1155-1202 1249-1286 1516-1553 PHLYA_VIBCH HEMOLYSIN PRECURSOR VIBRIO CHOLERAE  335-369  638-665 PHLYB_ACTPL HAEMOLYSIN SECRETION ACTINOBACILLUS PLEURO-  34-61 PROTEIN PNEUMONIAE PHLYB_ECOLI HAEMOLYSIN SECRETION ESCHERICHIA COLI  487-514 PROTEIN, PLASMID PHLYB_PROMI HEMOLYSIN ACTIVATOR PROTEUS MIRABILIS  16-64  499-547 PROTEIN PRECURSOR PHLYB_PROVU HAEMOLYSIN SECRETION PROTEUS VULGARIS  34-68  487-514 PROTEIN PHLYB_SERMA HEMOLYSIN ACTIVATOR SERRATIA MARCESCENS  110-137 PROTEIN PRECURSOR PHLYB_VIBCH HEMOLYSIN SECRETION VIBRIO CHOLERAE  335-398  413-447  458-524 PROTEIN PRECURSOR PHLYC_ACTPL HEMOLYSIN C ACTINOBACILLUS PLEURO-  130-157 PNEUMONIAE PHLYD_ACTPL HEMOLYSIN SECRETION ACTINOBACILLUS PLEURO-  191-331 PROTEIN APPD PNEUMONIAE PHLYD_ECOLI HEMOLYSIN D, PLASMID ESCHERICHIA COLI  103-133  178-215  223-331 PHLY_HAL17 HALOLYSIN PRECURSOR HALOPHILIC BACTERIA  484-516 STRAIN 172P1 PHMC3_DESVH 43.2 KD PROTEIN IN HMC DESULFOBIVRIO VULGARIS  156-186 OPERON PHMD_METKA H(2)-FORMING DEHYDRO- METHANOPYRUS KANDLERI  36-63 GENASE PHNS_SERMA DNA-BINDING PROTEIN H-NS SERRATIA MARCESCENS  35-62 PHOLA_ECOLI DNA POLYMERASE III, DELTA ESCHERICHIA COLI  94-121  288-322 SUBUNIT PHOXA_BRAJA REG PROTEIN HOXA BRADYRHIZOBIUM JAPONICUM  113-163  444-471 PHOXF_NOCOP HOXS ALPHA SUBUNIT NOCARDIA OPACA   4-31 PHOXQ_ALCEU HOXQ PROTEIN ALCALIGENES EUTROPHUS  76-110 PHOXX_BRAJA HOXX PROTEIN BRADYRHIZOBIUM JAPONICUM  356-383 PHPI_DEIRA HEXAGONALLY SURFACE DEINOCCCUS RADIODURANS  585-612 PROTEIN PRECURSOR PHPRT_LACLA PHOSPHORIBOSYL- LACTOCOCCUS LACTIS   3-39  71-105 TRANSFERASE PHRDD_STRCO SIGMA FACTOR HRDD STREPTOMYCES COELICOLOR  296-323 PHRPB_BURSO REGULATORY PROTEIN HRPB BURKHOLDERIA SOLANACEARUM  371-405 PHRPH_PSESY OUTER MEMBRANE PROTEIN PSEUDOMONAS SYRINGAE  102-129  310-344 HRPH PRECURSOR PHRPS_PSESH PROBABLE REGULATORY PSEUDOMONAS SYRINGAE  24-51 PROTEIN HRPS PHS18_CLOAB 18 KB HEAT SHOCK PROTEIN CLOSTRIDIUM ACETOBUTYLICUM  67-108 PHS70_HALMA HEAT SHOCK 70 KD PROTEIN HALOARCULA MARISMORTUI  522-576 PHS70_MYCLE HEAT SHOCK 70 KD PROTEIN MYCOBACTERIUM LEPRAE  461-488  503-530 PHS70_MYCPA HEAT SHOCK 70 KD PROTEIN MYCOBACTERIUM PARA-  460-487 TUBERCULOSIS PHTPG_ECOLI HEAT SHOCK PROTEIN C62.5 ESCHERICHIA COLI  221-248  482-509 PHTRA_ECOLI PROTEASE DO PRECURSOR ESCHERICHIA COLI  373-400 PHTRE_ECOLI HTRE PROTEIN PRECURSOR ESCHERICHIA COLI  454-484  524-576 PHTRJ_HALHA SENSORY RHODOPSIN I HALOBACTERIUM HALOBIUM  413-471  479-506 TRANSDUCER PHTRJ_HALSA SENSORY RHODOPSIN I HALOBACTERIUM SALINARIUM  114-159  413-471  479-506 TRANSDUCER PHUTP_BACSU HUT OPERON POSITIVE BACILLUS SUBTILIS   5-36 REGULATORY PROTEIN PHVTJ_LACHE HELVETICIN J LACTOBACILLUS HELVETICUS  174-212  306-333 PHYCA_ECOLI FORMATE HYDROGENYLASE ESCHERICHIA COLI  73-100  106-133 SUBUNIT 1 PHYDG_ECOLI TRANSCRIPTIONAL REGULA- ESCHERICHIA COLI  251-278 TORY PROTEIN HYDG PHYDG_SALTY TRANSCRIPTIONAL REGULA- SALMONELLA TYPHIMURIUM  251-278 TORY PROTEIN HYDG PHYDH_ECOLI SENSOR PROTEIN HYDH ESCHERICHIA COLI  312-339  360-387 PHYUB_PSESN HYDANTOIN UTILIZATION PSEUDOMONAS SP  554-581 PROTEIN B PHYUC_PSESN HYDANTOIN UTILIZATION PSEUDOMONAS SP   6-40  96-123 PROTEIN PIAAL_PSESS INDOLEACETATE-LYSINE PSEUDOMONAS SYRINGAE  133-160  297-331 LIGASE PIAP_ECOLI ALK PHOS ISOZYME CONVER- ESCHERICHIA COLI  74-101 SION PROTEIN PICEN_ERWAN ICE NUCLEATION PROTEIN ERWINIA ANANAS  326-353  422-449  534-561  614-641  662-689  721-748  758-785  854-881  950-977 1046-1073 PICEN_ERWHE ICE NUCLEATION PROTEIN ERWINIA HERBIOCOLA  310-337  406-433  534-561  646-673  694-721  838-865  886-913  982-1009 PICEN_PSEFL ICE NUCLEATION PROTEIN PSEUDOMONAS FLUORESCENS  281-308  377-404  425-452  681-708  729-781  795-852 PICEN_PSESY ICE NUCLEATION PROTEIN PSEUDOMONAS SYRINGAE  564-602  772-847  868-895  909-943 PICEN_XANCT ICE NUCLEATION PROTEIN XANTHOMONAS CAMPESTRIS  496-534  555-582 1168-1204 1248-1275 PICSB_SHIFL INTERCELLULAR SPREAD SHIGELLA FLEXNERI  41-105  438-467 PROTEIN PIF2_BACST INITIATION FACTOR IF-2 BACILLUS STEAROTHERMOPHILUS  540-567  681-708 PIF2_BACSU INITIATION FACTOR IF-2 BACILLUS SUBTILIS  173-208  394-421 PIF2_ECOLI INITIATION FACTOR IF-2 ESCHERICHIA COLI  686-724  835-862 PIF2_ENTFC INITIATION FACTOR IF-2 ENTEROCOCCUS FAECIUM  579-627 PIF3_BACST INITIATION FACTOR IF-3 BACILLUS STEAROTHERMOPHILUS   7-34 PIF3_ECOLI INITIATION FACTOR IF-3 ESCHERICHIA COLI  27-54  70-97 PIF3_KLEPN INITIATION FACTOR IF-3 KLEBSIELLA PNEUMONIAE  27-54  70-97 PIF3_MYCFE INITIATION FACTOR IF-3 MYCOPLASMA FERMENTANS  177-211 PIF3_PROVU INITIATION FACTOR IF-3 PROTEUS VULGARIS   2-29  70-97 PIF3_SALTY INITIATION FACTOR IF-3 SALMONELLA TYPHIMURIUM  27-54  70-97 PIF3_SERMA INITIATION FACTOR IF-3 SERRATIA MARCESCENS  19-46  70-97 PIGA_NEIGO IGA-SPECIFIC SERINE NEISSERIA GONORRHOEAE  245-272  287-314  833-860 1024-1058 1377-1404 1483-1531 ENDOPEPTIDASE PIGGB_STRSP IGG BINDING PROTEIN STREPTOCOCCUS SP  46-76  120-150  195-222 PRECURSOR PIGGG_STRSP IGG BINDING PROTEIN STREPTOCOCCUS SP  46-76  120-150  195-225  270-297 PRECURSOR PILVH_ECOLI ACETOLACTATE SYNTHASE ESCHERICHIA COLI  47-81  120-147 PILVH_SALTY ACETOLACTATE SYNTHASE SALMONELLA TYPHIMURIUM  47-81  120-147 PILVN_LACLA ACETOLACTATE SYNTHASE LACTOCOCCUS LACTIS  20-75 PIMPB_SALTY IMPB PROTEIN SALMONELLA TYPHIMURIUM  185-212 PIMP_ACICA INOSINE-5′-MONOPHOSPHATE ACINETOBACTER CALCOACETICUS  166-193 DEHYDROGENASE PIMP_BACSU E-5′-MONOPHOSPHATE BACILLUS SUBTILIS  159-186 DEHYDROGENASE PINA_BACTL IMMUNE INHIBITOR A BACILLUS THURINGIENSIS  103-130  324-358 PRECURSOR PINLA_LISMO INTERNALIN A LISTERIA MONOCYTOGENES  106-143  161-188  196-232 PINLB_LISMO INTERNALIN B PRECURSOR LISTERIA MONOCYTOGENES  53-94  166-200  385-415 PINVA_YEREN INVASIN YERSINIA ENTEROCOLITICA  501-535 PIPA7_SHIFL 60 KD ANTIGEN SHIGELLA FLEXNERI  285-312 PIPAA_SHIFL 70 KD ANTIGEN SHIGELLA FLEXNERI  95-136  437-475  493-557  596-630 PIPAB_SHIDY 62 KD MEMBRANE ANTIGEN SHIGELLA DYSENTERIAE  28-55  71-169  480-507  522-556 PIPAB_SHIFL 62 KD MEMBRANE ANTIGEN SHIGELLA FLEXNERI  28-55  71-169  480-507  522-556 PIPAC_SHIDY 42 KD MEMBRANE ANTIGEN SHIGELLA DYSENTERIAE  21-57  113-161  273-300  324-378 PRECURSOR PIPAC_SHIFL 42 KD MEMBRANE ANTIGEN SHIGELLA FLEXNERI  28-57  113-161  273-300  324-372 PRECURSOR PIPAD_SHIDY 37 KD MEMBRANE ANTIGEN SHIGELLA DYSENTERIAE  47-86  291-318 IPAD PIPAD_SHIFL 36 KD MEMBRANE ANTIGEN SHIGELLA FLEXNERI  47-86  259-286  291-318 PIPGB_SHIDY IPGB PROTEIN SHIGELLA DYSENTERIAE  175-202 PIPGB_SHIFL IPGB PROTEIN SHIGELLA FLEXNERI  175-202 PIPT_PSESS ISOPENTENYL TRANSFERASE PSEUDOMONAS SYRINGAE  53-87  143-173 PIPYR_ECOLI INORGANIC PYROPHOSPHA- ESCHERICHIA COLI  138-172 TASE PIRGA_VIBCH VIRULENCE PROTEIN VIBRIO CHOLERAE  212-239  336-377 PRECURSOR PIRGB_VIBCH VIRULENCE REGULATORY VIBRIO CHOLERAE  67-97 PROTEIN IRGB PIRPA_SYNP7 IRON-REGULATED PROTEIN A SYNECHOCOCCUS SP  167-194 PISBD_SHIDY INSERTION ELEMENT ISO- SHIGELLA DYSENTERIAE  86-113 ISID PROTEIN INSB PISBN_SHIDY INSERTION ELEMENT ISO- SHIGELLA DYSENTERIAE   6-37 ISIN PROTEIN INSB PISB_ECOLI INSERTION ELEMENT IS1 ESCHERICHIA COLI  122-149 PROTEIN INSB PISB_SHIFL INSERTION ELEMENT IS1 SHIGELLA FLEXNERI  86-113 PROTEIN INSB PISB_SHISO INSERTION ELEMENT IS1 SHIGELLA SONNEI  86-113 PROTEIN INSB PISP1_BACSU MAJOR INTRACELLULAR BACILLUS SUBTILIS  115-142  197-224  253-280 SERINE PROTEASE PISP_BACPO INTRACELLULAR SERINE BACILLUS POLYMYXA  109-143 PROTEASE PISTA_ECOLI ISTA PROTEIN ESCHERICHIA COLI  183-210 PISTA_SHISO ISTA PROTEIN SHIGELLA SONNEI  183-210 PIUTA_ECOLI FERRIC AEROBACTIN ESCHERICHIA COLI  186-213  525-552  559-593 RECEPTOR PRECURSOR PJAG_BACSU JAG PROTEIN BACILLUS SUBTILIS  68-95 PK6P2_ECOLI 6-PHOSPHOFRUCTOKINASE ESCHERICHIA COLI  143-170 ISOZYME 2 PKAD_BACSU ADENYLATE KINASE BACILLUS SUBTILIS  188-215 PKAD_LACLA ADENYLATE KINASE LACTOCOCCUS LACTIS  186-213 PKANU_BACSP KANAMYCIN NUCLEOTIDYL- BACILLUS SP  69-96 TRANSFERASE PKANU_STAAU KANAMYCIN NUCLEOTIDYL- STAPHYLOCOCCUS AUREUS  69-96 TRANSFERASE PKDGT_ECOLI 2-KETO-3-DEOXYGLUCONATE ESCHERICHIA COLI  70-97 PERMEASE PKDGT_ERWCH 2-KETO-3-DEOXYGLUCONATE ERWINIA CHRYSANTHEMI  126-153 PERMEASE PKDTA_ECOLI 3-DEOXY-D-MANNO- ESCHERICHIA COLI  369-396 OCTULOSONIC-ACID TRANS PKGTP_ECOLI ALPHA-KETOGLUTARATE ESCHERICHIA COLI   7-34 PERMEASE PKGUA_ECOLI GUANYLATE KINASE ESCHERICHIA COLI  162-189 PKHSE_BACSU HOMOSERINE KINASE BACILLUS SUBTILIS  49-76 PKHSE_FREDI HOMOSERINE KINASE FREMYELLA DIPLOSIPHON  52-79 PKKA4_BACCI AMINOGLYCOSIDE 3′- BACILLUS CIRCULANS  12-39 PHOSPHOTRANSFERASE PKORB_ECOLI KORB TRANSCRIPTIONAL ESCHERICHIA COLI  228-255 REPRESSOR PROTEIN PKPY1_SPICI PYRUVATE KINASE SPIROPLASMA CITRI  112-148 PKPYK_BACST PYRUVATE KINASE BACILLUS STEAROTHERMOPHILUS  331-374 PLACA_STAAU ISOMERASE LACA SUBUNIT STAPHYLOCOCCUS AUREUS   9-64 PLACA_STRMU ISOMERASE LACA SUBUNIT STAPHYLOCOCCUS MUTANS  26-60 PLACA_STRMU TAGATOSE-6-PHOSPHATE STAPHYLOCOCCUS MUTANS  56-83  283-310 KINASE PLACG_LACCA 6-PHOSPHO-BETA-GALACTO- LACTOBACILLUS CASEI  290-317 SIDASE PLACI_ECOLI LACTOSE OPERON ESCHERICHIA COLI   9-36 REPRESSOR PLACI_KLEPN LACTOSE OPERON KLEBSIELLA PNEUMONIAE  195-229 REPRESSOR PLACR_STAAU PHOSPHOTRANSFERASE STAPHYLOCOCCUS AUREUS   2-29 REPRESSOR PLACR_STRMU PHOSPHOTRANSFERASE STREPTOCOCCUS MUTANS   2-32 REPRESSOR PLACY_LACDE LACTOSE PERMEASE LACTOBACILLUS DELBRUECKII  196-230 PLAFB_VIBPA FLAGELLAR HOOK- VIBRIO PARAHAEMOLYTICUS  62-89  388-415 ASSOCIATED PROTEIN 2 PLAMB_KLEPN MALTOPORIN PRECURSOR KLEBSIELLA PNEUMONIAE  337-364 PLAMI_CLOTM ENDO-1,3(4)-BETA- CLOSTRIDIUM THERMOCELLUM  132-159 GLUCANASE PRECURSOR PLASI_PSEAE OHHL SYNTHESIS PROTEIN PSEUDOMONAS AERUGINOSA  171-198 LASI PLCCI_LEUGE PROBABLE LEUCOCIN A LEUCONOSTOC GELIDUM  41-71 IMMUNITY PROTEIN PLCNC_LACLA LACTOCOCCIN A SECRETION LACTOCOCCUS LACTIS  162-189  207-234  388-433 PROTEIN LCNC PLCND_LACLA LACTOCOCCIN A SECRETION LACTOCOCCUS LACTIS  99-126  140-202  237-307 PROTEIN LCND PLCRD_YEREN LOW CALCIUM RESPONSE YERSINIA ENTEROCOLITICA  122-149  491-518 LOCUS PROTEIN D PLCRD_YERPE LOW CALCIUM RESPONSE YERSINIA PESTIS  122-149  491-518 LOCUS PROTEIN D PLCRV_YERPE VIRULENCE-ASSOCIATED V YERSINIA PESTIS  22-49  157-184  240-267 ANTIGEN PLCRV_YERPS VIRULENCE-ASSOCIATED V YERSINIA PSEUDOTUBERCULOSIS  22-49  240-267 ANTIGEN PLCTB_BACCA LCTB PROTEIN BACILLUS CALDOTENAX  18-45 PLCTB_BACST LCTB PROTEIN BACILLUS STEAROTHERMOPHILUS  14-45 PLDHD_LACPL D-LACTATE DEHYDRO- LACTOBACILLUS PLANTARUM  51-81 GENASE PLDHP_BACPS L-LACTATE DEHYDRO- BACILLUS PSYCHRO-   2-43  241-272  279-306 GENASE P SACCHAROLYTICUS PLDHX_BACPS L-LACTATE DEHYDRO- BACILLUS PSYCHRO-   2-43  241-275  279-306 GENASE X SACCHAROLYTICUS PLDH_BACME L-LACTATE DEHYDRO- BACILLUS MEGATERIUM  244-274 GENASE PLDH_BACST L-LACTATE DEHYDRO- BACILLUS STEAROTHERMOPHILUS  241-268  279-313 GENASE PLDH_BACSU L-LACTATE DEHYDRO- BACILLUS SUBTILIS   8-42  240-267 GENASE PLDH_BIFLO L-LACTATE DEHYDRO- BIFIDOBACTERIUM LONGUM  22-49 GENASE PLDH_LACPL L-LACTATE DEHYDRO- LACTOBACILLUS PLANTARUM  197-231 GENASE PLDH_LISMO L-LACTATE DEHYDRO- LISTERIA MONOCYTOGENES  42-69 GENASE PLDH_MYCHY L-LACTATE DEHYDRO- MYCOPLASMA HYOPNEUMONIAE  276-310 GENASE PLDH_THEAQ L-LACTATE DEHYDRO- THERMUS AQUATICUS   3-30 GENASE PLEF_BACAN LETHAL FACTOR PRECURSOR BACILLUS ANTHRACIS  165-192  304-331  480-514  548-578  619-658  737-764 PLEPA_PSEFL LEPA PROTEIN PSEUDOMONAS FLUORESCENS  23-50 PLEP_BACSU SIGNAL PEPTIDASE I BACILLUS SUBTILIS   3-30 PLEU1_ECOLI 2-ISOPROPYLMALATE ESCHERICHIA COLI  437-464 SYNTHASE PLEU1_LACLA 2-ISOPROPYLMALATE LACTOCOCCUS LACTIS  22-49  379-484 SYNTHASE PLEU3_BACCO 3-ISOPROPYLMALATE BACILLUS COAGULANS  331-358 DEHYDROGENASE PLEU3_CLOPA 3-ISOPROPYLMALATE CLOSTRIDIUM PASTEURIANUM  185-212 DEHYDROGENASE PLEUD_LACLA 3-ISOPROPYLMALATE LACTOCOCCUS LACTIS  163-190 DEHYDRATASE PLEVR_BACSU TRANSCRIPTIONAL REGULA- BACILLUS SUBTILIS  297-324  676-703  744-774  785-822 TORY PROTEIN LEVR PLEXA_ERWCA LEXA REPRESSOR ERWINIA CAROTOVORA  146-173 PLIP1_MORSP LIPASE 1 MORAXELLA SP  26-53 PLIP2_MORSP LIPASE 2 MORAXELLA SP  356-383 PLIPB_ECOLI LIPB PROTEIN ESCHERICHIA COLI  66-93 PLIP_BURCE LIPASE PRECURSOR BURKHOLDERIA CEPACIA  176-203 PLIP_PSEFL LIPASE PRECURSOR PSEUDOMONAS FLUORESCENS   8-35 PLIP_PSES5 LIPASE PRECURSOR PSEUDOMONAS SP  176-203 PLIP_STAAU LIPASE PRECURSOR STAPHYLOCOCCUS AUREUS  80-146  512-546 PLIVB_SALTY LEU/ILE/VAL/THR-BINDING SALMONELLA TYPHIMURIUM  193-220 PROTEIN PRECURSOR PLIVC_SALTY LEUCINE-SPECIFIC BINDING SALMONELLA TYPHIMURIUM  195-222 PROTEIN PRECURSOR PLIVE_SALTY AMINO ACID TRANSPORT SALMONELLA TYPHIMURIUM  121-148 PROTEIN LIVE PLIVF_ECOLI AMINO ACID TRANSPORT ESCHERICHIA COLI  23-50 PROTEIN LIVF PLIVJ_CITFR LEU/ILE/VAL-BINDING CITROBACTER FREUNDII  195-222 PROTEIN PRECURSOR PLIVJ_ECOLI LEU/ILE/VAL-BINDING ESCHERICHIA COLI  195-222 PROTEIN PRECURSOR PLIVK_ECOLI LEUCINE-SPECIFIC BINDING ESCHERICHIA COLI  195-222 PROTEIN PRECURSOR PLIVM_ECOLI AMINO ACID TRANSPORT ESCHERICHIA COLI  121-148 PROTEIN LIVM PLKTA_ACTAC LEUKOTOXIN ACTINOBACILLUS ACTINO-  113-147  173-213  398-443  451-488  593-620  655-711 MYCETEMCOMITANS PLKTA_PASHA LEUKOTOXIN PASTEURELLA HAEMOLYTICA  53-99  179-216  345-372  409-436  455-482  496-530  545-572  811-838  853-926 PLKTB_ACTAC LEUKOTOXIN SECRETION ACTINOBACILLUS ACTINO-  487-514 PROTEIN MYCETEMCOMITANS PLKTB_PASHA LEUKOTOXIN SECRETION PASTEURELLA HAEMOLYTICA  42-69  78-105  488-515 PROTEIN PLKTC_ACTAC LTC PROTEIN ACTINOBACILLUS ACTINO-  58-85  116-150 MYCETEMCOMITANS PLKTC_PASHA LKTC PROTEIN PASTEURELLA HAEMOLYTICA  123-157 PLKTD_ACTAC LKTD PROTEIN ACTINOBACILLUS ACTINO-  116-164  205-242  278-305  364-391 MYCETEMCOMITANS PLKTD_PASHA LKTD PROTEIN PASTEURELLA HAEMOLYTICA  184-289 PLON_ECOLI ATP-DEPENDENT PROTEASE ESCHERICHIA COLI  121-148 LA PLPXA_RICRI UDP-N-ACETYLGLUCO- RICKETTSIA RICKETTSII  229-256 SAMINE ACYLTRANSFERASE PLSPA_ECOLI LIPOPROTEIN SIGNAL ESCHERICHIA COLI  10-37 PEPTIDASE PLSPA_STAAU LIPOPROTEIN SIGNAL STAPHYLOCOCCUS AUREUS  134-161 PEPTIDASE PLUKF_STAAU LEUKOCIDIN F SUBUNIT STAPHYLOCOCCUS AUREUS  161-195 PRECURSOR PLUKS_STAAU LEUKOCIDIN S SUBUNIT STAPHYLOCOCCUS AUREUS  157-207 PRECURSOR PLUXA_KRYAL ALKANAL MONOOXYGENASE KRYPTOPHANARON ALFREDI  190-217 ALPHA CHAIN PLUXB_PHOPO ALKANAL MONOOXYGENASE PHOTOBACTERIUM  188-217  257-291 BETA CHAIN PHOSPHOREUM PLUXB_VIBHA ALKANAL MONOOXYGENASE VIBRIO HARVEYI  373-400 BETA CHAIN PLUXC_PHOLE ACYL-COA REDUCTASE PHOTOBACTERIUM LEIOGNATHI  44-81 PLUXC_PHOPO ACYL-COA REDUCTASE PHOTOBACTERIUM  54-91 PHOSPHOREUM PLUXC_VIBFI ACYL-COA REDUCTASE VIBRIO FISCHERI  16-65 PLUXC_XENLU ACYL-COA REDUCTASE XENORHABDUS LUMINESCENS  39-69 PLUXD_PHOLE ACYL TRANSFERASE PHOTOBACTERIUM LEIOGNATHI  89-119  218-245 PLUXE_VIBHA LUCIFERIN-COMPONENT VIBRIO HARVEYI  30-57 LIGASE PLUXF_PHOLE NON-FLUORESCENT FLAVO- PHOTOBACTERIUM LEIOGNATHI  145-172 PROTEIN PLUXF_PHOPO NON-FLUORESCENT FLAVO- PHOTOBACTERIUM  37-85  99-126 PROTEIN PHOSPHOREUM PLUXG_VIBFI PROBABLE FLAVIN VIBRIO FISCHERI  137-168 REDUCTASE PLUXH_VIBHA LUXH PROTEIN VIBRIO HARVEYI  96-123 PLUXI_VIBFI OHHL SYNTHESIS PROTEIN VIBRIO FISCHERI  30-58 LUXI PLUXJ_VIBFI OHHL SYNTHESIS PROTEIN VIBRIO FISCHERI  30-57 LUXI PLUXP_PHOPO LUMAZINE PROTEIN PHOTOBACTERIUM  51-85  162-189 PHOSPHOREUM PLUXR_VIBHA LUXR REGULATORY PROTEIN VIBRIO HARVEYI  61-88 PLXB1_PHOLE ALKANAL MONOOXYGENASE PHOTOBACTERIUM LEIOGNATHI  268-295 BETA CHAIN PLXB2_PHOLE ALKANAL MONOOXYGENASE PHOTOBACTERIUM LEIOGNATHI  228-255 BETA CHAIN PLYB_BACSU B-ENZYME BACILLUS SUBTILIS  87-114 PLYC_CLOAB AUTOLYTIC LYSOZYME CLOSTRIDIUM ACETOBUTYLICUM  91-118 PLYSP_ECOLI LYSINE-SPECIFIC PERMEASE ESCHERICHIA COLI  142-176 PLYTB_BACSU AMIDASE ENHANCER BACILLUS SUBTILIS  55-82  150-177  467-513  555-585 PRECURSOR PLYTB_ECOLI LYTB PROTEIN ESCHERICHIA COLI  210-237 PLYTC_BACSU AMIDASE PRECURSOR BACILLUS SUBTILIS  179-213  225-252 PLYTR_BACSU MEMBRANE-BOUND PROTEIN BACILLUS SUBTILIS  13-64  259-303 LYTR PM12_STRPY M PROTEIN, SEROTYPE 12 STREPTOCOCCUS PYOGENES  46-92  114-156  191-300  305-342  383-417  436-494 PRECURSOR PM24_STRPY M PROTEIN, SEROTYPE 24 STREPTOCOCCUS PYOGENES  12-46  89-128  175-202  245-272  280-313  399-457 PRECURSOR PM49_STRPY M PROTEIN, SEROTYPE 49 STREPTOCOCCUS PYOGENES  12-174  269-327 PRECURSOR PM5_STRPY M PROTEIN, SEROTYPE 5 STREPTOCOCCUS PYOGENES   5-39  56-263  306-333  352-410 PRECURSOR PM6_STRPY M PROTEIN, SEROTYPE 6 STREPTOCOCCUS PYOGENES  12-39  70-282  290-324  343-401 PRECURSOR PMALE_ECOLI MALTOSE-BINDING PROTEIN ESCHERICHIA COLI  20-47 PRECURSOR PMALE_ENTAE MALTOSE-BINDING PROTEIN ENTEROBACTER AEROGENES  20-47 PRECURSOR PMALK_ENTAE INNER MEMBRANE PROTEIN ENTEROBACTER AEROGENES   3-30 MALK PMALT_ECOLI MALT REGULATORY PROTEIN ESCHERICHIA COLI  852-879 PMALX_STRPN MALX PROTEIN PRECURSOR STREPTOCOCCUS PNEUMONIAE  40-67  180-207 PMANB_BACSM 1,4-BETA-MANNOSIDASE A BACILLUS SP  410-441 AND B PREC PMANB_CALSA B-MANNANASE/ENDO- CALDOCELLUM  389-423  592-626 1222-1256 1296-1323 GLUCANASE A PREC SACCHAROLYTICUM PMAOX_BACST MALATE OXIDOREDUCTASE BACILLUS STEAROTHERMOPHILUS  246-273 PMARR_ECOLI ANTIBIOTIC RESISTANCE ESCHERICHIA COLI  95-122 PROTEIN MARR PMBEB_ECOLI MOBILIZATION PROTEIN ESCHERICHIA COLI  38-65  100-134 MBEB PMBHL_WOLSU QUINONE-REAC NI/FE- WOLINELLA SUCCINOGENES  440-471 HYDROGENASE PMCBB_ECOLI MCBB PROTEIN ESCHERICHIA COLI  47-74  122-163 PMCBD_ECOLI MCBD PROTEIN ESCHERICHIA COLI  172-206  226-253  306-345 PMCP1_ECOLI METHYL-ACCEPTING ESCHERICHIA COLI  272-299 CHEMOTAXIS PROTEIN I PMCP2_ECOLI METHYL-ACCEPTING ESCHERICHIA COLI  258-306 CHEMOTAXIS PROTEIN II PMCP2_SALTY METHYL-ACCEPTING SALMONELLA TYPHIMURIUM  258-306 CHEMOTAXIS PROTEIN II PMCP3_ECOLI METHYL-ACCEPTING ESCHERICHIA COLI  288-315 CHEMOTAXIS PROTEIN III PMCP4_ECOLI METHYL-ACCEPTING ESCHERICHIA COLI  111-145  164-191  277-304 CHEMOTAXIS PROTEIN IV PMCPA_CAUCR CHEMORECEPTOR MCPA CAULOBACTER CRESCENTUS  260-287  369-403  516-543 PMCPC_SALTY CHEMOTAXIS CITRATE SALMONELLA TYPHIMURIUM  314-348 TRANDUCER PMCPD_ENTAE CHEMOTAXIS ASPARTATE ENTEROBACTER AEROGENES  275-302 TRANSDUCER PMCPS_ENTAE CHEMOTAXIS SERINE ENTEROBACTER AEROGENES  41-68  158-208  317-351  488-522 TRANSDUCER PMCRA_ECOLI SPECIFIC RESTRICTION ESCHERICHIA COLI  37-71 ENZYME A PMCRA_METBA METHYL-COENZYME M METHANOSARCINA BARKERI  375-405 REDUCTASE PMCRA_METVA METHYL-COENZYME M METHANOCOCCUS VANNIELII  335-362 REDUCTASE PMCRA_METVO METHYL-COENZYME M METHANOCOCCUS VOLTAE  336-363 REDUCTASE PMCRB_METFE METHYL-COENZYME M METHANOTHERMUS FERVIDUS  267-294 REDUCTASE PMCRB_METVO METHYL-COENZYME M METHANOCOCCUS VOLTAE  247-274 REDUCTASE PMCRC_ECOLI MCRC PROTEIN ESCHERICHIA COLI  111-145 PMCRD_METVO REDUCTASE OPERON METHANOCOCCUS VOLTAE  54-91 PROTEIN D PMDH_ECOLI MALATE DEHYDROGENASE ESCHERICHIA COLI  127-154 PMDH_METFE MALATE DEHYDROGENASE METHANOTHERMUS FERVIDUS  54-88 PMDH_SALTY MALATE DEHYDROGENASE SALMONELLA TYPHIMURIUM  127-154 PMDL_ECOLI MDL PROTEIN ESCHERICHIA COLI  464-491  684-711  992-1019 PMDOH_ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI  119-152 MDOH PMECI_STAEP METHICILLIN RESIS REG STAPHYLOCOCCUS EPIDERMIDIS &  88-122 PROTEIN MECI AUREUS PMECR_STAEP METHICILLIN RESISTANCE STAPHYLOCOCCUS EPIDERMIDIS &  439-495  546-573 MECR1 PROTEIN AUREUS PMEMB_METCA METHANE MONOOXYGENASE METHYLOCOCCUS CAPSULATUS  214-248 COMPONENT A PMEMB_METTR METHANE MONOOXYGENASE METHYLOSINUS TRICHOSPORIUM  321-348 COMPONENT A PMEND_ECOLI SHCHC SYNTHASE ESCHERICHIA COLI  333-367 PMER4_STRLI PROBABLE HG TRANSPORT STREPTOMYCES LIVIDANS  159-186 PROTEIN PMERA_BACSR MERCURIC REDUCTASE BACILLUS SP  146-180 PMERA_STAAU MERCURIC REDUCTASE STAPHYLOCOCCUS AUREUS  292-347  352-386 PMERR_STAAU MERCURIC RESISTANCE STAPHYLOCOCCUS AUREUS  86-113 OPERON REG PROTEIN PMETB_ECOLI CYSTATHIONINE GAMMA- ESCHERICHIA COLI  356-383 SYNTHASE PMETC_ECOLI CYSTATHIONINE BETA- ESCHERICHIA COLI  363-390 LYASE PMETC_SALTY CYSTATHIONINE BETA- SALMONELLA TYPHIMURIUM   2-29 LYASE PMETE_ECOLI METHIONINE SYNTHASE ESCHERICHIA COLI  448-482 PMETH_ECOLI METHIONINE SYNTHASE ESCHERICHIA COLI  371-398  642-676 PMFD_ECOLI TRANSCRIPTION-REPAIR ESCHERICHIA COLI  185-212 COUPLING FACTOR PMGLA_ECOLI GALACTOSIDE-BINDING ESCHERICHIA COLI  62-89  312-380 PROTEIN PMINC_BACSU SEPTUM SITE-DETERMINING BACILLUS SUBTILIS  65-122 PROTEIN MINC PMIOC_ECOLI MIOC PROTEIN ESCHERICHIA COLI  102-129 PM1P_CHLTR 27 KD MEMBRANE PROTEIN CHLAMYDIA TRACHOMATIS  41-75 PRECURSOR PM1P_LEGMI OUTER MEMBRANE PROTEIN LEGIONELLA MICDADEI  106-133 MIP PRECURSOR PMLS1_ENTFA RRNA ADENINE N-6-METHYL- ENTEROCOCCUS FAECALIS   4-81  20-154 TRANSFERASE PMLS1_STAAU RRNA ADENINE N-6-METHYL- STAPHYLOCOCCUS AUREUS   9-47 TRANSFERASE PMLS2_ENTFA RRNA ADENINE N-6-METHYL- ENTEROCOCCUS FAECALIS   4-81  120-154 TRANSFERASE PMLSB_BACFR RRNA ADENINE N-6-METHYL- BACTEROIDES FRAGILIS  16-43 TRANSFERASE PMLSB_ECOLI RRNA ADENINE N-6-METHYL- ESCHERICHIA COLI   4-81  120-154 TRANSFERASE PMLSB_STRPN RRNA ADENINE N-6-METHYL- STREPTOCOCCUS PNEUMONIAE   4-81  120-154 TRANSFERASE PMLSB_STRSA RRNA ADENINE N-6-METHYL- STREPTOCOCCUS SANGUIS   4-81  120-154 TRANSFERASE PMLSC_BACFR RRNA ADENINE N-6-METHYL- BACTEROIDES FRAGILIS  16-43 TRANSFERASE PMMOB_METC METHANE MONOOXYGENASE METHYLOCOCCUS CAPSULATUS  34-64 REG PROTEIN B PMOAB_ECOLI MOLYBD COFAC BIOSYN ESCHERICHIA COLI  49-76 PROTEIN B PMOBA_THIFE MOBA PROTEIN THIOBACILLUS FERROOXIDANS  94-121  251-278 PMOBC_THIFE MOBC PROTEIN THIOBACILLUS FERROOXIDANS  20-47 PMOBD_THIFE MOBD PROTEIN THIOBACILLUS FERROOXIDANS  95-132 PMOB_ECOLI MOB PROTEIN ESCHERICHIA COLI  45-72 PMOEA_ECOLI MOLYBDOPTERIN BIO- ESCHERICHIA COLI  243-270 SYNTHESIS MOEA PROTEIN PMOP1_CLOPA MOLYBDENUM-PTERIN CLOSTRIDIUM PASTEURIANUM  26-53 BINDING PROTEIN I PMOP2_CLOPA MOLYBDENUM-PTERIN CLOSTRIDIUM PASTEURIANUM  26-64 BINDING PROTEIN II PMOXY_PARDE METHANOL UTIL CONT PARACOCCUS DENITRIFICANS  200-234  307-334 PROTEIN MOXY PMPEU_SYNPY BILIN BIOSYNTHESIS SYNECHOCOCCUS SP   2-36  80-107  198-225 PROTEIN MPEU PMPEV_SYNPY BILIN BIOSYNTHESIS SYNECHOCOCCUS SP   2-31  175-216 PROTEIN MPEV PMPRA_ECOLI MPRA PROTEIN ESCHERICHIA COLI  136-163 PMRAY_BACSU PENTAPEPTIDE- BACILLUS SUBTILIS  106-133  247-281 TRANSFERASE PMREB_BACCE ROD SHAPE-DETERMINING BACILLUS CEREUS  186-213 PROTEIN MREB PMREC_BACSU ROD SHAPE-DETERMINING BACILLUS SUBTILIS  65-112 PROTEIN MREC PMRKB_KLEPN CHAPERONE PROTEIN MRKB KLEBSIELLA PNEUMONIAE  198-232 PRECURSOR PMRKC_KLEPN MRKC PROTEIN PRECURSOR KLEBSIELLA PNEUMONIAE  55-82  452-489  592-622 PMRKD_KLEPN FIMBRIA ADHESION PROTEIN KLEBSIELLA PNEUMONIAE  222-268 PRECURSOR PMRKE_KLEPN MRKE PROTEIN KLEBSIELLA PNEUMONIAE  193-220 PMRP4_STRPY FIBRINOGEN-/IG-BINDING STREPTOCOCCUS PYOGENES   7-46  99-310 PROTEIN PRECURSOR PMRP_STRSU MURAMIDASE-RELEASED STREPTOCOCCUS SUIS  75-102  130-177  261-291  421-448  507-534  588-622  773-800 1058-1085 PROTEIN PRECURSOR PMSBA_ECOLI PROB ATP-BINDING ESCHERICHIA COLI  116-150  412-449 TRANSPORT PROTEIN MSBA PMSRA_STAEP ERYTHROMYCIN RESISTANCE STAPHYLOCOCCUS EPIDERMIDIS  174-223  323-350 PROTEIN PMSYB_ECOLI ACIDIC PROTEIN MSYB ESCHERICHIA COLI  73-100 PMT57_ECOLI MODIFICATION METHYLASE ESCHERICHIA COLI  250-284  474-544 ECO571 PMTA1_ACICA MODIFICATION METHYLASE ACINETOBACTER CALCOACETICUS  503-540 ACCI PMTAB_SYNP2 MODIFICATION METHYLASE SYNECHOCOCCUS SP  19-46 AQUI BETA SUBUNIT PMTB1_BREEP MODIFICATION METHYLASE BREVIBACTERIUM EPIDERMIDIS  166-200  309-336 BEPI PMTB1_HERAU MODIFICATION METHYLASE HERPETOSIPHON AURANTIACUS  281-308 HGIBI PMTB2_BACAM MODIFICATION METHYLASE BACILLUS AMYLOLIQUEFACIENS  35-62 BAMHII PMTB3_BACAR MODIFICATION METHYLASE BACILLUS ANEURINOLYTICUS  184-211 BANIII PMTBA_BACAR MODIFICATION METHYLASE BACILLUS ANEURINOLYTICUS  121-148  382-409 BANI PMTBB_BACSU MODIFICATION METHYLASE BACILLUS SUBTILIS  231-258  467-496 BSUBI PMTBF_BACSU MODIFICATION METHYLASE BACILLUS SUBTILIS  208-235 BSUFI PMTC1_CITFR MODIFICATION METHYLASE CITROBACTER FREUNDII   2-36  55-82  252-279 CFRBI PMTC1_HERAU MODIFICATION METHYLASE HERPETOSIPHON AURANTIACUS  120-147 HGICI PMTC2_HERAU MODIFICATION METHYLASE HERPETOSIPHON AURANTIACUS  281-311 HGICII PMTE1_ECOLI MODIFICATION METHYLASE ESCHERICHIA COLI  76-110  145-172 ECORI PMTE1_HERAU MODIFICATION METHYLASE HERPETOSIPHON AURANTIACUS  281-308 HGIEI PMTE2_ECOLI MODIFICATION METHYLASE ESCHERICHIA COLI   4-61 ECORII PMTE5_ECOLI MODIFICATION METHYLASE ESCHERICHIA COLI  73-100 ECO RV PMTEC_ENTCL MODIFICATION METHYLASE ENTEROBACTER CLOACAE  418-445 ECIA PMTF1_FLAOK MODIFICATION METHYLASE FLAVOBACTERIUM OKEANOKOITES  184-211  279-306  337-366  398-425  555-646 FOKI PMTF1_FUSNU MODIFICATION METHYLASE FUSOBACTERIUM NUCLEATUM  22-49 FNUDI PMTG2_HAEGA MODIFICATION METHYLASE HAEMOPHILUS GALLINARUM  135-165 HGAI-2 PMTH2_HAEIN MODIFICATION METHYLASE HAEMOPHILUS INFLUENZAE  181-208  399-426 HINCII PMTHZ_METTF MODIFICATION METHYLASE METHANOBACTERIUM  188-215  296-323 MTHZI THERMOFORMICICUM PMTK1_KLEPN MODIFICATION METHYLASE KLEBSIELLA PNEUMONIAE  270-297 KPNI PMTLD_STRMU MANNITOL-1-PHOSPHATE 5- STREPTOCOCCUS MUTANS  39-66  224-258  349-376 DEHYDROGENASE PMTM1_MORSP MODIFICATION METHYLASE MORAXELLA SP   5-39  49-104 MSPI PMTN3_NEILA MODIFICATION METHYLASE NEISSERIA LACTAMICA  124-158  183-210 NLAIII PMTP2_PROVU MODIFICATION METHYLASE PROTEUS VULGARIS  308-335 PVU II PMTPG_SULAC MEMBRANE-ASSOCIATED SULFOLOBUS ACIDOCALDARIUS   9-67 ATPASE PMTPS_PROST MODIFICATION METHYLASE PROVIDENCIA STUARTII  226-264 PSTI PMTR_ECOLI TRYPTOPHAN-SPECIFIC ESCHERICHIA COLI  80-107 TRANSPORT PROTEIN PMTS1_STRSA MODIFICATION METHYLASE STREPTOCOCCUS SANGUIS  116-153  434-461  600-645 STSI PMTS2_SHISO MODIFICATION METHYLASE SHIGELLA SONNEI  81-108 SSOII PMTS9_STAAU MODIFICATION METHYLASE STAPHYLOCOCCUS AUREUS  233-274 SAU96I PMTSA_LACLC MODIFICATION METHYLASE LACTOCOCCUS LACTIS  88-115  187-214 SCRFI-A PMTSB_LACLC MODIFICATION METHYLASE LACTOCOCCUS LACTIS  27-61 SCRFI-B PMTS1_SPISQ CPG DNA METHYLASE SPIROPLASMA SP  188-230  256-290 PMTSM_SERMA MODIFICATION METHYLASE SERRATIA MARCESCENS  61-88 SMAI PMTT8_THETH MODIFICATION METHYLASE THERMUS AQUATICUS  120-157 TTHHB8I PMTV1_VIBS3 MODIFICATION METHYLASE VIBRIO SP  23-66 VSPI PMUKB_ECOLI MUKB PROTEIN ESCHERICHIA COLI  320-381 1014-1048 1216-1252 PMULI_ERWAM MAJOR OUTER MEMBRANE ERWINIA AMYLOVORA  24-54 LIPOPROTEIN PREC PMULI_MORMO MAJOR OUTER MEMBRANE MORGANELA MORGANII  27-54 LIPOPROTEIN PREC PMULI_PROMI MAJOR OUTER MEMBRANE PROTEUS MIRABILIS  21-63 LIPOPROTEIN PREC PMURD_BACSU UDP-LIGASE BACILLUS SUBTILIS  101-132  299-326 PMURE_ECOLI LIGASE ESCHERICHIA COLI  107-134 PMURF_ECOLI UDP-MURNAC-PENTAPEPTIDE ESCHERICHIA COLI  407-437 SYNTHETASE PMURZ_ECOLI ENOYLPYRUVATE ESCHERICHIA COLI  392-419 TRANSFERASE PMURZ_ENTCL ENOYLPYRUVATE ENTEROBACTER CLOACAE  392-419 TRANSFERASE PMUTA_STRCM METHYLMALONYL-COA STREPTOMYCES CINNAMONENSIS  31-58 MUTASE BETA-SUBUNIT PMUTB_PROFR METHYLMALONYL-COA PROPIONIBACTERIUM  549-576 MUTASE ALPHA-SUBUNIT FREUDENREICHII PMUTB_SALTY /G-SPECIFIC ADENINE SALMONELLA TYPHIMURIUM  273-300 GLYCOSYLASE PMUTB_STRCM METHYLMALONYL-COA STREPTOMYCES CINNAMONENSIS  481-508 MUTASE ALPHA-SUBUNIT PMUTL_ECOLI DNA MISMATCH REPAIR ESCHERICHIA COLI  80-114 PROTEIN MUTL PMUTL_SALTY DNA MISMATCH REPAIR SALMONELLA TYPHIMURIUM  80-114 PROTEIN MUTL PMUTL_VIBCH PROTEIN MUTL VIBRIO CHOLERAE  134-169 PMUTS_ECOLI DNA MISMATCH REPAIR ESCHERICHIA COLI  119-153 PROTEIN MUTS PMUTT_STRAM MUTT-LIKE PROTEIN STREPTOMYCES AMBOFACIENS  60-87 PMVAA_PSEMV COENZYME A REDUCTASE PSEUDOMONAS MEVALONII  341-368 PMX_STRPY M-RELATED PROTEIN STREPTOCOCCUS PYOGENES   5-129  148-182  190-217  240-301 PRECURSOR PMYCO_STRCI MYCOLYSIN PRECURSOR STREPTOMYCES CACAOI  300-352 PMYFC_YEREN MYFC PROTEIN PRECURSOR YERSINIA ENTEROCOLITICA  210-237 PNADC_SALTY NICOTINATE-NUCLEOTIDE SALMONELLA TYPHIMURIUM  123-154  255-289 PYROPHOSPHORYLASE PNADR_SALTY TRANSCRIPTIONAL SALMONELLA TYPHIMURIUM  233-260 REGULATOR NADR PNAGD_ECOLI NAGD PROTEIN ESCHERICHIA COLI  75-102 PNAGH_CLOPE HYALURONOGLUCOS- CLOSTRIDIUM PERFRINGENS  48-75  990-1017 AMINIDASE PNAGR_ECOLI NAGR PROTEIN ESCHERICHIA COLI  119-153 PNANH_CLOSE SIALIDASE PRECURSOR CLOSTRIDIUM SEPTICUM  11-42  289-330  922-988 PNANH_CLOSO SIALIDASE PRECURSOR CLOSTRIDIUM SORDELLII  377-404 PNANH_SALTY SIALIDASE SALMONELLA TYPHIMURIUM  290-317 PNAPA_ENTHR NA(+)/H(+) ANTIPORTER ENTEROCOCCUS HIRAE  116-150 PNARG_ECOLI RESPIRATORY NITRATE ESCHERICHIA COLI  386-420 REDUCTASE ALPHA CHAIN PNARL_ECOLI REGULATOR PROTEIN NARL ESCHERICHIA COLI  76-103 PNARP_ECOLI REGULATOR PROTEIN NARP ESCHERICHIA COLI  155-189 PNARX_ECOLI NITRATE/NITRITE SENSOR ESCHERICHIA COLI  220-247  358-385  431-458  505-538 PROTEIN NARX PNDVA_RHIME BETA-(1→2)GLUCAN EXPORT RHIZOBIUM MELILOTI  212-239 PROTEIN PNEOR_STRCY NEOMYCIN RESISTANCE STREPTOMYCES CYANOGENUS  348-375 PROTEIN PNEUA_ECOLI ACYLNEURAMINATE ESCHERICHIA COLI  218-252  268-298 CYTIDYLYLTRANSFERASE PNFRA_ECOLI N4 ADSORPTION PROTEIN A ESCHERICHIA COLI  490-517 PRECURSOR PNFRB_ECOLI N4 ADSORPTION PROTEIN B ESCHERICHIA COLI   2-43  186-220  511-538 PNFRC_ECOLI N4 ADSORPTION PROTEIN C ESCHERICHIA COLI  315-342 PNFSI_ENTCL NAD(P)H NITROREDUCTASE ENTEROBACTER CLOACAE   9-36 PNHAA_ECOLI NA(+)/H(+) ANTIPORTER 1 ESCHERICHIA COLI  206-233 PNHAB_ECOLI NA(+)/H(+) ANTIPORTER 2 ESCHERICHIA COLI  271-305 PNHAB_PSECL NITRILE HYDRATASE PSEUDOMONAS CHLORORAPHIS  71-101 SUBUNIT BETA PNHB1_RHORH NITRILE HYDRATASE RHODOCOCCUS RHODOCHROUS  63-93 SUBUNIT BETA PNIFA_AZOBR NIF-SPECIFIC REGULATORY AZOSPIRILLUM BRASILENSE   7-44 PROTEIN PNIFA_BRAJA NIF-SPECIFIC REGULATORY BRADYRHIZOBIUM JAPONICUM  252-279 PROTEIN PNIFA_HERSE NIF-SPECIFIC REGULATORY HERBASPIRILLUM SEROPEDICAE   9-51  162-203  327-354 PROTEIN PNIFA_RHILE NIF-SPECIFIC REGULATORY RHIZOBIUM LEGUMINOSARUM  100-127 PROTEIN PNIFA_RHIME NIF-SPECIFIC REGULATORY RHIZOBIUM MELILOTI  171-198 PROTEIN PNIFA_RHOCA NIF-SPECIFIC REGULATORY RHODOBACTER CAPSULATUS  260-287 PROTEIN PNIFB_AZOVI NIFB PROTEIN AZOTOBACTER VINELANDII  342-369 PNIFB_KLEPN NIFB PROTEIN KLEBSIELLA PNEUMONIAE  154-181 PNIFD_ANASP NITROG MOLYBD-IRON ANABAENA SP  374-401 PROTEIN PNIFD_AZOBR NITROG MOLYBD-IRON AZOSPIRILLUM BRASILENSE  377-404 PROTEIN PNIFD_PLEBO NITROG MOLYBD-IRON PLECTONEMA BORYANUM  387-414 PROTEIN PNIFD_THIFE NITROG MOLYBD-IRON THIOBACILLUS FERROOXIDANS  383-410 PROTEIN PNIFE_CLOPA BIOSYNTHESIS PROTEIN NIFE CLOSTRIDIUM PASTEURIANUM  359-386 PNIFH_FRAGR NITROGENASE IRON PROTEIN FRANKIA SP  56-83 PNIFH_PLEBO NITROGENASE IRON PROTEIN PLECTONEMA BORYANUM  267-294 PNIFK_AZOBR NITROG MOLYBD-IRON AZOSPIRILLUM BRASILENSE  430-457 PROTEIN PNIFK_BRAJA NITROG MOLYBD-IRON BRADYRHIZOBIUM JAPONICUM  483-510 PROTEIN PNIFK_BRASP NITROG MOLYBD-IRON BRADYRHIZOBIUM SP  478-505 PROTEIN PNIFK_CLOPA NITROG MOLYBD-IRON CLOSTRIDIUM PASTEURIANUM  227-254 PROTEIN PNIFK_THIFE NITROG MOLYBD-IRON THIOBACILLUS FERROOXIDANS  479-506 PROTEIN PNIFM_AZOCH NIFM PROTEIN AZOTOBACTER CHROOCOCCUM  265-292 MCD 1 PNIFN_BRAJA BIOSYNTHESIS PROTEIN BRADYRHIZOBIUM JAPONICUM  339-366 NIFN PNIFS_ANASP NIFS PROTEIN ANABAENA SP  112-139 PNIFS_LACDE NIFS PROTEIN HOMOLOG LACTOBACILLUS DELBRUECKII  59-86 PNIFT_AZOVI NIFT PROTEIN AZOTOBACTER VINELANDII   6-33 PNIFU_ANASL NIFU PROTEIN ANABAENA SP   7-49 PNIFU_ANASP NIFU PROTEIN ANABAENA SP  148-178 PNIFU_KLEPN NIFU PROTEIN KLEBSIELLA PNEUMONIAE  66-93 PNIKA_ECOLI NICKEL TRANSPORT PROTEIN ESCHERICHIA COLI  122-149  282-309  456-483 NIKA PRECURSOR PNIKE_ECOLI NICKEL TRANSPORT PROTEIN ESCHERICHIA COLI  177-204 NIKE PNIRB_ECOLI NITRITE REDUCTASE ESCHERICHIA COLI  54-81  345-372 PNIRC_ECOLI NIRC PROTEIN ESCHERICHIA COLI  212-239 PNIRS_PSEST PSEUDOMONAS CYTO- PSEUDOMONAS STUTZERI  303-333 CHROME OXIDASE PRECURSO PNISB_LACLA 117 KD MEMBRANE LACTOCOCCUS LACTIS  202-229  287-332  663-697  886-902 ASSOCIATED PROTEIN PNISC_LACLA NISIN BIOSYNTHESIS LACTOCUCCUS LACTIS  52-92  140-188 PROTEIN NISC PNIST_LACLA NISIN TRANSPORT PROTEIN LACTOCOCCUS LACTIS  223-257  278-305  426-470 NIST PNIVA_CLOPA HOMOCITRATE SYNTHASE, CLOSTRIDIUM PASTEURIANUM  100-127  234-268 ALPHA SUBUNIT PNIVO_CLOPA HOMOCITRATE SYNTHASE, CLOSTRIDIUM PASTEURIANUM  63-94  103-132  213-240  283-310 OMEGA SUBUNIT PNMPC_ECOLI PORIN PROTEIN NMPC ESCHERICHIA COLI  22-49  69-96  335-362 PRECURSOR PNODC_BRASP NODULATION PROTEIN C BRADYRHIZOBIUM SP   3-30 PNODC_RHILO NODULATION PROTEIN C RHIZOBIUM LOTI  286-313 PNODC_RHILT NODULATION PROTEIN C RHIZOBIUM LEGUMINOSARUM  14-48 PNODF_RHILV NODULATION PROTEIN F RHIZOBIUM LEGUMINOSARUM  31-58 PNODF_RHIMS NODULATION PROTEIN F RHIZOBIUM MELILOTI  39-66 PNODG_RHIME NODULATION PROTEIN G RHIZOBIUM MELILOTI   8-35 PNODG_RHIMS NODULATION PROTEIN G RHIZOBIUM MELILOTI   8-35 PNODL_RHILV NODULATION PROTEIN L RHIZOBIUM LEGUMINOSARUM  26-53 PNODQ_AZOBR NODULATION PROTEIN Q AZOSPIRILLUM BRASILENSE  60-87 PNODT_RHILT NODULATION PROTEIN T RHIZOBIUM LEGUMINOSARUM  104-134  355-382  420-454 PNODT_RHILV NODULATION PROTEIN T RHIZOBIUM LEGUMINOSARUM  364-391  416-443 PNODU_RHIFR NODULATION PROTEIN U RHIZOBIUM FREDII  506-536 PNODV_BRAJA NODULATION PROTEIN V BRADYRHIZOBIUM JAPONICUM  378-419  739-766 PNODX_RHILV NODULATION PROTEIN X RHIZOBIUM LEGUMINOSARUM  232-259 PNOLB_RHIFR NODULATION PROTEIN NOLB RHIZOBIUM FREDII  133-160 PNOLR_RHIME NODULATION PROTEIN NOLR RHIZOBIUM MELILOTI  88-115 PNOSD_PSEST NOSD PROTEIN PRECURSOR PSEUDOMONAS STUTZERI  319-346 PNOSR_PSEST REGULATORY PROTEIN NOSR PSEUDOMONAS STUTZERI  127-154 PNOSZ_PSEAE NITROUS-OXIDE REDUCTASE PSEDOMONAS AERUGINOSA  267-294 PRECURSOR PNOSZ_PSEST NITROUS-OXIDE REDUCTASE PSEUDOMONAS STUTZERI  557-591 PRECURSOR PNPRE_BACAM BACILLOLYSIN PRECURSOR BACILLUS AMLOLIQUEFACIENS  113-147  217-244 PNPRE_BACPO BACILLOLYSIN PRECURSOR BACILLUS POLYMYXA  57-91  187-228 PNPRE_BACSU BACILLOLYSIN PRECURSOR BACILLUS SUBTILIS  116-146  307-334 PNQO5_PARDE NADH-UBIQUINONE PARACOCCUS DENITRIFICANS   4-45 OXIDOREDUCTASE 21 KD CHAI PNQO9_PARDE NADH-UBIQUINONE PARACOCCUS DENITRIFICANS  125-152 OXIDOREDUC 20 KD CHAIN PNRDD_ECOLI ANNAER RIBONUC-TRIPHOS ESCHERICHIA COLI  91-125 REDUCTASE PNRFA_ECOLI CYTOCHROME C552 ESCHERICHIA COLI  319-346 PRECURSOR PNRFG_ECOLI NRFG PROTEIN ESCHERICHIA COLI  72-111 PNRL1_RHORH ALIPHATIC NITRILASE RHODOCOCCUS RHODOCHROUS  109-136 PNSR_LACLA NISIN-RESISTANCE PROTEIN LACTOCOCCUS LACTIS  52-79  135-162 PNTCA_ANASP DNA-BINDING PROTEIN VF1 ANABAENA SP  65-92 PNTCA_SYNP7 GLOBAL NITROGEN SYNECHOCOCCUS SP  44-91 REGULATOR PNTCA_SYNP3 GLOBAL NITROGEN SYNECHOCYSTIS SP  67-94 REGULATOR PNTRB_VIBAL NITROGEN REGULATION VIBRIO ALGINOLYTICUS  194-223 PROTEIN NTRB PNTRC_PROVU NITROGEN REGULATION PROTEUS VULGARIS  385-412 PROTEIN NR PNTRC_RHIME NITROGEN ASSIMILATION RHIZOBIUM MELILOTI  451-478 REGULATORY PROTEIN PNU2C_SYNP7 NADH-PLASTOQUINONE SYNECHOCOCCUS SP  80-107 OXIDOREDUCTASE CHAIN PNU4C_SYNY3 NADH-PLASTOQUINONE SYNECHOCYSTIS SP  27-54 OXIDOREDUCTASE CHAIN PNU5C_SYNP2 NADH-PLASTOQUINONE SYNECHOCOCCUS SP  614-641 OXIDOREDUCTASE CHAIN PNUJC_SYNY3 PROB NADH-UBIQUINONE SYNECHOCYSTIS SP  163-190 OXIDOREDUCTASE SUBU PNUKC_SYNY3 PROB NADH-UBIQUINONE SYNECHOCYSTIS SP  169-199 OXIDOREDUCTASE SUBU PNULX_SYNY3 NADH-PLASTOQUINONE SYNECHOCYSTIS SP  46-80 OXIDOREDUCTASE CHAIN PNUOG_ECOLI NADH DEHYDROGENASE I ESCHERICHIA COLI  368-402 CHAIN G PNUOL_ECOLI NADH DEHYDROGENASE I ESCHERICHIA COLI  30-57  496-523 CHAIN L PNUON_ECOLI NADH DEHYDROGENASE I ESCHERICHIA COLI  392-419 CHAIN N PNUPC_ECOLI NUCLEOTIDE PERMEASE ESCHERICHIA COLI  13-43  134-164  356-383 PNUSA_ECOLI NUSA PROTEIN ESCHERICHIA COLI  21-62 PNUSB_ECOLI N UTILIZATION SUBSTANCE ESCHERICHIA COLI  17-65  70-97 PROTEIN B PNUSG_ECOLI TRANSCRIPTION ANTI- ESCHERICHIA COLI  141-168 TERMINATION PROTEIN NUS PNUSG_THEMA TRANSCRIPTION ANTI- THERMOTOGA MARITIMA  203-230 TERMINATION PROTEIN NUS PNYLB_FLASP 6-AMINOHEXANOATE-DIMER FLAVOBACTERIUM SP  223-250 HYDROLASE PNYLC_FLASP 6-AMINOHEXANOATE-DIMER FLAVOBACTERIUM SP  223-250 HYDROLASE PO16G_BACCE OLIGO-1,6-GLUCOSIDASE BACILLUS CEREUS  301-328 POCCT_AGRT6 OCTOPINE-BINDING PROTEIN AGROBACTERIUM TUMEFACIENS  172-202 T PRECURSOR PODO1_AZOVI 2-OXOGLUTARATE AZOTOBACTER VINELANDII  829-856 DEHYDROGENASE E1 COMPONE PODO1_BACSU 2-OXOGLUTARATE BACILLUS SUBTILIS  487-524  809-850 DEHYDROGENASE E1 COMPONE PODO1_ECOLI 2-OXOGLUTARATE ESCHERICHIA COLI   6-33 DEHYDROGENASE E1 COMPONE PODO2_BACSU DIHYDROLIPOAMIDE SUC- BACILLUS SUBTILIS  30-60 TRANSF COMP PODOB_PSEPU 2-OXOGLUTARATE PSEUDOMONAS PUTIDA  223-254 DEHYDROGENASE E1 COMPONE PODP1_ECOLI PYRUVATE DEHYDRO- ESCHERICHIA COLI  624-651 GENASE E1 COMPONENT PODP2_AZOVI DIHYDROLIPOAMIDE AZOTOBACTER VINELANDII  518-545 ACETRANS COMP PODP2_ECOLI DIHYDROLIPOAMIDE ESCHERICHIA COLI  14-41  117-144 ACETRANS COMP PODPA_BACST PYRUVATE DEHYDRO- BACILLUS STEAROTHERMOPHILUS  299-333 GENASE E1 COMPONENT PODPA_BACSU PYRUVATE DEHYDRO- BACILLUS SUBTILIS  305-332 GENASE E1 COMPONENT PODPB_BACST PYRUVATE DEHYDRO- BACILLUS STEAROTHERMOPHILUS  23-50 GENASE E1 COMPONENT PODPB_BACSU PYRUVATE DEHYDRO- BACILLUS SUBTILIS  16-50 GENASE E1 COMPONENT POM1E_CHLTR 15 KD CYSTEINE-RICH CHLAMYDIA TRACHOMATIS  38-65 PROTEIN, SEROVAR E POMA1_NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE  63-90 P1 A PRECURSOR POMA1_NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS  359-386 P1 A PRECURSOR POMA2_NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS  353-380 PI.A PRECURSOR POMB1_NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE  63-90 P.IB PRECURSOR POMB1_NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS  63-90 P.IB PRECURSOR POMB2_NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE  63-90 P.IB PRECURSOR POMB2_NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS  63-90 P.IB PRECURSOR POMB3_NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS  63-90 P.IB PRECURSOR POMB4_NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS  24-51  63-90 P.IB PRECURSOR POMB_NEILA OUTER MEMBRANE PROTEIN NEISSERIA LACTAMICA  116-143 P.IB PRECURSOR POMB_NEISI OUTER MEMBRANE PROTEIN NEISSERIA SICCA  24-51  63-90 P.IB PRECURSOR POMLA_ACTPL OUTER MEMBRANE LIPO- ACTINOBACILLUS  114-151 PROTEIN PRECURSOR PLEUROPNEUMONIAE POMP1_HAEIN OUTER MEMBRANE PROTEIN HAEMOPHILUS INFLUENZAE  154-184  303-330  341-368 P1 PRECURSOR POMP2_HAEIN OUTER MEMBRANE PROTEIN HAEMOPHILUS INFLUENZAE  16-71  220-254  326-353 P2 PRECURSOR POMP3_NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE  14-41 P.III PRECURSOR POMP7_STAAU 70 KD OUTER MEMBRANE STAPHYLOCOCCUS AUREUS  53-80  88-115 PROTEIN PRECURSOR POMPA_THEMA OUTER MEMBRANE PROTEIN THERMOTOGA MARITIMA  100-138  151-178  183-249  255-292  301-328  351-385 ALPHA PRECURSOR POMPC_ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA COLI  20-47  64-94 C PRECURSOR POMPC_(—)NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE  89-123 P.IIC PRECURSOR POMPC_SALTI OUTER MEMBRANE PROTEIN SALMONELLA TYPHI  166-193 C PRECURSOR POMPF_ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA COLI  21-55  231-258 F PRECURSOR POMPH_PHOS9 OMPH PROTEIN PHOTOBACTERIUM SP  292-319 POMPT_ECOLI PROTEASE VII PRECURSOR ESCHERICHIA COLI  37-64 POP65_NEIGO OPACITY PROTEIN OPA65 NEISSERIA GONORRHOEAE  71-111 POP67_NEIGO OPACITY PROTEIN OPA67 NEISSERIA GONORRHOEAE  72-109 POPAA_NEIGO OPACITY PROTEIN OPA53 NEISSERIA GONORRHOEAE  71-123  140-167 POPAG_NEIGO OPACITY PROTEIN OPA52 NEISSERIA GONORRHOEAE  80-107  140-167 POPAI_NEIGO OPACITY PROTEIN OPA54 NEISSERIA GONORRHOEAE  80-107 POPAJ_NEIGO OPACITY PROTEIN OPA58 NEISSERIA GONORRHOEAE  71-105 POPAK_NEIGO OPACITY PROTEIN OPA57 NEISSERIA GONORRHOEAE  71-105 POPDA_ECOLI OLIGOPEPTIDASE A ESCHERICHIA COLI  147-174 POPDA_SALTY OLIGOPEPTIDASE A SALMONELLA TYPHIMURIUM  147-174 POPDE_PSEAE TRANSCRIPTION FACTOR PSEUDOMONAS AUREGINOSA  64-91 OPDE POPPA_ECOLI OLIGOPEPTIDE-BINDING ESCHERICHIA COLI  402-432 PROTEIN PRECURSOR POPPB_SALTY OLIGOPEPTIDE PERMEASE SALMONELLA TYPHIMURIUM  265-299 PROTEIN OPPB POPR1_NEIME OPACITY-RELATED PROTEIN NEISSERIA MENINGITIDIS  108-135 POPM1 POPR3_NEIME OPACITY-RELATED PROTEIN NEISSERIA MENINGITIDIS  94-135 POPM3 POSMC_ECOLI OSMOTICALLY INDUCIBLE ESCHERICHIA COLI   5-32 PROTEIN OSMC POSPA_BORBU OUTER SURFACE PROTEIN A BORRELIA BURGDORFERI  63-100  112-139  157-204  223-271 PRECURSOR POSPB_BORBU OUTER SURFACE PROTEIN B BORRELIA BURGDORFERI  113-259  262-296 PRECURSOR POTC2_BACSU ORNITHINE CARBAMOYL- BACILLUS SUBTILIS  188-215 TRANSFERASE POTCC_PSEAE ORNITHINE CARBAMOYL- PSEUDOMONAS AERUGINOSA  17-44 TRANSFERASE POTCC_PSEPU ORNITHINE CARBAMOYL- PSEUDOMONAS PUTIDA   3-33 TRANSFERASE POUTB_BACSU SPORE OUTGROWTH FACTOR BACILLUS SUBTILIS  225-252 B POUTO_ERWCA LEADER PEPTIDASE ERWINIA CAROTOVORA  189-216 PP18K_STRPA 18 KD PROTEIN IN FIMA STREPTOCOCCUS PARASANGUIS  115-149 3′ REGION PP18K_STRSA 18 KD PROTEIN IN SSAB STREPTOCOCCUS SANGUIS  10-37  114-148 3′ REGION PP1P_LACLC P1-TYPE PROTEINASE LACTOCOCCUS LACTIS  107-155  904-950 1073-1100 1223-1250 1466-1496 1625-1655 PRECURSOR PP29_MYCHR PROTEIN P29 MYCOPLASMA HYORHINIS   5-56  101-160  202-246 PP2P_LACLA PII-TYPE PROTEINASE LACTOCOCCUS LACTIS  107-155  904-950 1073-1100 1223-1250 1446-1496 1625-1689 PRECURSOR PP2P_LACPA II-TYPE PROTEINASE LACTOBACILLUS PARACASEI  107-155  904-941 1073-1100 1223-1250 1446-1496 1628-1655 PRECURSOR PP30_ECOLI P30 PROTEIN ESCHERICHIA COLI  55-82 PP34_RICRI PROTEIN P34 RICKETTSIA RICKETTSII   9-47  135-173 PP37_MYCHR PROTEIN P37 PRECURSOR MYCOPLASMA HYORHINIS  38-75 PP3P_LACLC PIII-TYPE PROTEINASE LACTOCOCCUS LACTIS  107-155  904-950 1073-1100 1223-1250 1446-1496 1628-1655 PRECURSOR PP47K_PSECL 47 KD PROTEIN PSEUDOMONAS CHLORORAPHIS  288-315 PP54_ENTFC P54 PROTEIN PRECURSOR ENTEROCOCCUS FAECIUM  58-92  141-209 PP60_LISGR PROTEIN P60 PRECURSOR LISTERIA GRAYI  31-61  101-142  300-334  431-458 PP60_LISIN PROTEIN P60 PRECURSOR LISTERIA INNOCUA  67-94  102-143 PP60_LISIV PROTEIN P60 PRECURSOR LISTERIA IVANOVII  101-140  315-359 PP60_LISMO PROTEIN P60 PRECURSOR LISTERIA MONOCYTOGENES  103-144 PP60_LISSE PROTEIN P60 PRECURSOR LISTERIA SEELIGERI  101-140  270-298  321-365  395-422 PP60_LISWE PROETIN P60 PRECURSOR LISTERIA WELSHIMERI  113-140  317-361  396-423 PP69_MYCHR PROTEIN P69 MYCOPLASMA HYORHINIS  264-295  421-464  487-517  544-575 PPABA_BACSU ADC SYNTHASE BACILLUS SUBTILIS  12-41 PPABC_BACSU 4-AMINO-4- BACILLUS SUBTILIS  250-277 DEOXYCHORISMATE LYASE PPABC_ECOLI 4-AMINO-4- ESCHERICHIA COLI  140-167 DEOXYCHORISMATE LYASE PPABL_STRGR PROTEIN Y STREPTOMYCES GRISEUS  52-79 PPAC_ARTVI PENICILLIN ACYLASE ARTHROBACTER VISCOSUS  170-197  333-363  571-606  640-674 PRECURSOR PPAC_BACSH PENICILLIN ACYLASE BACILLUS SPHAERICUS  232-259 PPAC_STRMU PAC PROTEIN PRECURSOR STREPTOCOCCUS MUTANS  146-276  281-465  538-565  576-630 1075-1102 1159-1186 1381-1434 PPAI1_BACSU REGULATORY PROTEIN PAI 1 BACILLUS SUBTILIS  103-137 PPAI2_BACSU REGULATORY PROTEIN PAI 2 BACILLUS SUBTILIS  145-172 PPAPE_ECOLI FIMBRIAL PROTEIN PAPE ESCHERICHIA COLI  42-69  86-123 PPAPF_ECOLI MINOR FIMBRIAL PROTEIN ESCHERICHIA COLI   4-31 PAPF PPAPG_ECOLI FIMBRIAL PROTEIN PAPG ESCHERICHIA COLI  282-316 PRECURSOR PPARA_AGRTU PARA PROTEIN AGROBACTERIUM TUMEFACIENS  60-87 PPARB_ECOLI PLASMID PARTITION PAR B ESCHERICHIA COLI  117-154  249-283 PROTEIN PPARE_ECOLI TOPOISOMERASE IV SUBUNIT ESCHERICHIA COLI  444-471  526-553 B PPARE_SALTY TOPOISOMERASE IV SUBUNIT SALMONELLA TYPHIMURIUM  444-471  526-553 B PPA_BACAN PROTECTIVE ANTIGEN BACILLUS ANTHRACIS  13-52  125-152  296-335  585-615  650-684 PRECURSOR PPBP2_ECOLI PENICILLIN-BINDING ESCHERICHIA COLI  95-122  178-205  207-241 PROTEIN 2 PPPB2_NEIGO PENICILLIN-BINDING NEISSERIA GONORRHOEAE  193-220 PROTEIN 2 PPBP2_NEIME PENICILLIN-BINDING NEISSERIA MENINGITIDIS  193-220 PROTEIN 2 PPBP2_STRPN PENICILLIN-BINDING STREPTOCOCCUS PNEUMONIAE  144-183  216-243  259-286  605-632 PROTEIN 2B PPBP3_ECOLI PENICILLIN-BINDING ESCHERICHIA COLI  224-251  334-368 PROTEIN 3 PRECURSOR PPBP4_BACSU PENICILLIN-BINDING BACILLUS SUBTILIS  374-401 PROTEIN 4° PPBP4_ECOLI PENICILLIN-BINDING ESCHERICHIA COLI  336-363 PROTEIN 4 PRECURSOR PPBPA_ECOLI PENICILLIN-BINDING ESCHERICHIA COLI  145-172 PROTEIN 1A PPBPB_ECOLI PENICILLIN-BINDING ESCHERICHIA COLI  62-96  263-290 PROTEIN 1B PPBPX_STRPN PENICILLIN-BINDING STREPTOCOCCUS PNEUMONIAE  89-116  706-733 PROTEIN 2X PPBP_STAAU PENICILLIN-BINDING STAPHYLOCOCCUS AUREUS  78-108  176-203  263-324  502-529 PROTEIN PPCAB_PSEPU CYCLOISOMERASE PSEUDOMONAS PUTIDA  115-142  226-253 PPEL3_ERWCA PECTATE LYASE III ERWINIA CAROTOVORA  110-137 PRECURSOR PPELA_ERWCA PECTATE LYASE A ERWINIA CAROTOVORA  110-137 PRECURSOR PPELB_ERWCA PECTATE LYASE B ERWINIA CAROTOVORA  110-137 PRECURSOR PPELC_ERWCA PECTATE LYASE C ERWINIA CAROTOVORA  110-137 PRECURSOR PPELF_ERWCH PECTATE LYASE E ERWINIA CHRYSANTHEMI  40-67  209-243 PRECURSOR PPELP_ERWCA PERIPLASMIC PECTATE ERWINIA CAROTOVORA  455-482 LYASE PRECURSOR PPELP_YERPS PERIPLASMIC PECTATE YERSINIA PSEUDOTUBERCULOSIS  459-489 LYASE PRECURSOR PPELX_ERWCA PUTATIVE PECTATE LYASE X ERWINIA CAROTOVORA  188-218 PRECURSOR PPELX_ERWCH EXOPOLYGALACTURONATE ERWINIA CHRYSANTHEMI  466-493 LYASE PRECURSOR PPEPD_ECOLI AMINOACYL-HISTIDINE ESCHERICHIA COLI  264-314 DIPEPTIDASE PPEPQ_ECOLI X-PRO DIPEPTIDASE ESCHERICHIA COLI  251-278 PPERT_BORBR PERTACTIN PRECURSOR BORDETELLA BRONCHISEPTICA  617-644 PPERT_BORPA PERTACTIN PRECURSOR BORDETELLA PARAPERTUSSIS  628-655 PPERT_BORPE PERTACTIN PRECURSOR BORDETELLA PERTUSSIS  616-643 PPGK_CORGL PHOSPHOGLYCERATE CORYNEBACTERIUM GLUTMICUM  83-117 KINASE PPGK_ECOLI PHOSPHOGLYCERATE ESCHERICHIA COLI  186-216 KINASE PPGK_METBR PHOSPHOGLYCERATE METHANOBACTERIUM BRYANTII  36-63 KINASE PPGK_THETH PHOSPHOGLYCERATE THERMUS AQUATICUS  222-249 KINASE PPGL1_ERWCA ENDO-POLYGALACTURO- ERWINIA CAROTOVORA  237-271 NASE PRECURSOR PPGTE_SALTY OUTER MEMBRANE SALMONELLA TYPHIMURIUM  66-93 PROTEASE E PRECURSOR PPHA1_FREDI C-PHYCOCYANIN-1 ALPHA FREMYELLA DIPLOSIPHON  21-48 CHAIN PPHA2_FREDI C-PHYCOCYANIN-2 ALPHA FREMYELLA DIPLOSIPHON  21-48 CHAIN PPHAA_PSEOL POLY(3-HYDROXY- PSEUDOMONAS OLEOVORANS  264-291 ALKANOATE) POLYMERASE 1 PPHAB_ANACY ALLOPHYCOCYANIN BETA ANABAENA CYLINDRICA   7-48 CHAIN PPHAB_ANAVA ALLOPHYCOCYANIN BETA ANABAENA VARIABILIS  14-48 CHAIN PPHAB_FREDI ALLOPHYCOCYANIN BETA FREMYELLA DIPLOSIPHON   8-49 CHAIN PPHAB_MASLA ALLOPHYCOCYANIN BETA MASTIGOCLADUS LAMINOSUS  14-41 CHAIN PPHAB_SYNP6 ALLOPHYCOCYANIN BETA SYNECHOCOCCUS SP  14-41 CHAIN PPHAC_SYNP6 ALLOPHYCOCYANIN ALPHA- SYNECHOCOCCUS SP  33-60 B CHAIN PPHAG_FREDI ALLOPHYCOCYANIN GAMMA FREMYELLA DIPLOSIPHON  32-59 CHAIN PPHB3_FREDI C-PHYCOCYANIN-3 BETA FREMYELLA DIPLOSIPHON  29-56 CHAIN PPHBB_ALCEU ACETOACETYL-COA ALCALIGENES EUTROPHUS  55-85 REDUCTASE PPHCA_SYNY1 C-PHYCOCYANIN ALPHA SYNECHOCYSTIS SP  21-55 CHAIN PPHCB_SYNP6 C-PHYCOCYANIN BETA SYNECHOCOCCUS SP  28-55 CHAIN PPHCB_SYNP7 C-PHYCOCYANIN BETA SYNECHOCOCCUS SP  28-55 CHAIN PPHCB_SYNY1 C-PHYCOCYANIN BETA SYNECHOCYSTIS SP  21-55 CHAIN PPHEA_ECOLI CHORISMATE MUTASE ESCHERICHIA COLI  10-37 PPHEA_ERWHE CHORISMATE MUTASE ERWINIA HERBICOLA  10-37  159-186  252-286 PPHEA_PSESP PHENOL 2-MONOOXYGENASE PSEUDOMONAS SP  171-201  282-314  437-464 PPHEB_MASLA PHYCOERYTHROCYANIN MASTIGOCLADUS LAMINOSUS  21-62 BETA CHAIN PPHEB_PSESP CATHECHOL 1,2- PSEUDOMONAS SP  24-51 DIOXYGENASE PPHEG_SYNPY LINKER POLYPEPTIDE SYNECHOCOCCUS SP  158-185 PPHEP_ECOLI PHENYLALANINE-SPECIFIC ESCHERICHIA COLI  284-311 PERMEASE PPHF1_CLOPA PERIPLASMIC [FE] CLOSTRIDIUM PASTEURIANUM  434-471 HYDROGENASE 1 PPHL1_BACCE SPHINGOMYELINASE C BACILLUS CEREUS   2-36 PRECURSOR PPHL2_BACCE SPHINGOMYELINASE C BACILLUS CEREUS   2-36 PRECURSOR PPHL3_BACCE SPHINGOMYELINASE C BACILLUS CEREUS   2-36 PRECURSOR PPHLC_BACCE PHOSPHOLIPASE C BACILLUS CEREUS  32-59  179-206 PRECURSOR PPHLC_CLOBI PHOSPHOLIPASE C CLOSTRIDIUM BIFERMENTANS  50-77  335-365 PRECURSOR PPHLC_CLOPE PHOSPHOLIPASE C CLOSTRIDIUM PERFRINGENS  210-237  369-398 PRECURSOR PPHLC_LISMO PHOSPHOLIPASE C LISTERIA MONOCYTOGENES  147-174 PRECURSOR PPHLC_PSEAE HEMOLYTIC PHOSPHOLIPASE PSEUDOMONAS AERUGINOSA  685-712 C PRECURSOR PPHLC_STAAU PHOSPHOLIPASE C STAPHYLOCOCCUS AUREUS   6-33 PRECURSOR PPHLD_BACCE PHOSPHOLIPASE C BACILLUS CEREUS  179-206 PRECURSOR PPHL_LEPIN SPHINGOMYELINASE C LEPTOSPIRA INTERROGANS  30-57  394-428 PRECURSOR PPHND_ECOLI PHND PROTEIN ESCHERICHIA COLI  296-326 PPHNK_ECOLI PHNK PROTEIN ESCHERICHIA COLI  178-205 PPHNM_ECOLI PHNM PROTEIN ESCHERICHIA COLI   5-35 PPHOE_CITFR OUTER MEMBRANE PORE CITROBACTER FREUNDII  13-40  47-105 PROTEIN E PRECURSOR PPHOE_ECOLI OUTER MEMBRANE PORE ESCHERICHIA COLI  13-40  64-105  168-195  226-253 PROTEIN E PRECURSOR PPHOE_KLEOX OUTER MEMBRANE PORE KLEBSIELLA OXYTOCA  13-40  64-91 PROTEIN E PRECURSOR PPHOE_KLEPN OUTER MEMBRANE PORE KLEBSIELLA PNEUMONIAE  13-40  64-105 PROTEIN E PRECURSOR PPHOE_SALTY OUTER MEMBRANE PORE SALMONELLA TYPHIMURIUM  63-104  320-347 PROTEIN E PRECURSOR PPHOP_BACSU ALK PHOS SYNTHESIS BACILLUS SUBTILIS  185-219 TRANS REG PROTEIN PPHOQ_ECOLI SENSOR PROTEIN PHOQ ESCHERICHIA COLI  244-278 PPHOQ_SALTY VIRULENCE SENSOR PROTEIN SALMONELLA TYPHIMURIUM  226-260 PHOQ PPHOR_BACSU ALK PHOS SYNTHESIS BACILLUS SUBTILIS  89-145  387-425 SENSOR PROTEIN PHOR PPHRA_ECOLI PHOTOREPAIR PROTEIN ESCHERICHIA COLI  63-90  207-241 PHRA PPHRA_SYNPY R-PHYCOCYANIN II ALPHA SYNECHOCOCCUS SP  20-47 CHAIN PPHRA_SYNPZ R-PHYCOCYANIN II ALPHA SYNECHOCOCCUS SP  20-47 CHAIN PPHSG_ECOLI GLYCOGEN PHOSPHORYLASE ESCHERICHIA COLI  157-184  488-515 PPHSM_ECOLI MALTODEXTRIN ESCHERICHIA COLI  71-108 PHOSPHORYLASE PPILA_NEIGO PROB SIGNAL RECOGNITION NEISSERIA GONORRHOEAE  17-68 PARTICLE PROTEIN PPILB_PSEAE FIMBRIAL ASSEMBLY PSEUDOMONAS AERUGINOSA  16-60 PROTEIN PILB PPILC_PSEAE PILC PROTEIN PSEUDOMONAS AERUGINOSA  143-170 PPILD_NEIGO LEADER PEPTIDASE NEISSERIA GONORRHOEAE  110-137 PPILQ_PSEAE FIMBRIAL ASSEMBLY PSEUDOMONAS AERUGINOSA  71-115  639-666 PROTEIN PILQ PRECURSOR PPILS_PSEAE SENSOR PROTEIN PILS PSEUDOMONAS AERUGINOSA   9-46 PPIR_ECOLI P1 PROTEIN ESCHERICHIA COLI  156-188 PPIV_MORBO PILIN GENE INVERTING MORAXELLA BOVIS  42-69  152-182 PROTEIN PPIV_MORLA PILIN GENE INVERTING MORAXELLA LACUNATA  152-182 PROTEIN PPLC_BACCE PHOSPHODIESTERASE BACILLUS CEREUS  217-245 PRECURSOR PPLC_BACTU PHOSPHODIESTERASE BACILLUS THURINGIENSIS  216-245 PRECURSOR PPLC_LISMO PHOSPHODIESTERASE LISTERIA MONOCYTOGENES  238-265 PRECURSOR PPLSC_ECOLI ACYLTRANSFERASE ESCHERICHIA COLI  106-133 PPLSX_ECOLI PLSX PROTEIN ESCHERICHIA COLI  241-270 PPLYD_ERWCA PECTIN LYASE ERWINIA CAROTOVORA  27-92 PPMBA_ECOLI PMPA PROTEIN ESCHERICHIA COLI   9-50 PPME_ERWCH PECTINESTERASE ERWINIA CHRYSANTHEMI  60-87 PRECURSOR PPMGY_ECOLI PHOSPHOGLYCERATE ESCHERICHIA COLI  82-116 MUTASE PPMGY_ZYMM PHOSPHOGLYCERATE ZYMOMONAS MOBILIS  13-40  80-110 MUTASE PPNP_ECOLI POLYRIBONUC ESCHERICHIA COLI  260-294 NUCLEOTIDYLTRANSF PPNUC_SALTY PNUC PROTEIN SALMONELLA TYPHIMURIUM  178-205 PPODK_BACSY PYRUVATE, ORTHO- BACTEROIDES SYMBIOSUS  51-78 PHOSPHATE DIKINASE PPORF_PSESY OUTER MEMBRANE PORIN PSEUDOMONAS SYRINGAE  111-138 F PRECURSOR PPORO_PSEAE PORIN O PRECURSOR PSEUDOMONAS AERUGINOSA  390-424 PPORP_PSEAE PORIN P PRECURSOR PSEUDOMONAS AERUGINOSA  139-181  260-287  369-396 PPOTD_ECOLI BINDING PROTEIN ESCHERICHIA COLI  320-347 PRECURSOR PPOTE_ECOLI PUTRESCINE-ORNITHINE ESCHERICHIA COLI  91-118 ANTIPORTER PPOXB_ECOLI PYRUVATE DEHYDRO- ESCHERICHIA COLI   8-38 GENASE PPPB3_BACSU ALKALINE PHOSPHATASE III BACILLUS SUBTILIS  109-150  433-460 PRECURSOR PPPB4_BACSU ALKALINE PHOSPHATASE IV BACILLUS SUBTILIS  85-123  336-363 PRECURSOR PPPB_ECOLI ALKALINE PHOSPHATASE ESCHERICHIA COLI  235-262 PRECURSOR PPPB_ESCFE ALKALINE PHOSPHATE ESCHERICHIA FERGUSONII  236-263 PRECURSOR PPPCE_FLAME PROLYL ENDOPEPTIDASE FLAVOBACTERIUM  158-199 PRECURSOR MENINGOSEPTICUM PPPCF_FLAME PROLYL ENDOPEPTIDASE FLAVOBACTERIUM  158-199  256-283 PRECURSOR MENINGOSEPTICUM PPPCK_ECOLI PHOSPHOENOLPYRUVATE ESCHERICHIA COLI  45-72 CARBOXYKINASE PPPDA_CLOPE PROTEIN A PRECURSOR CLOSTRIDIUM PERFRINGENS  73-107 PPPSA_ECOLI PHOSPHOENOLPYRUVATE ESCHERICHIA COLI  49-76 SYNTHASE PPQQ2_ACICA COENZYME PQQ SYNTHESIS ACINETOBACTER CALCOACETICUS  40-74 PROTEIN II PPRCA_ANAVA CALCIUM DEPENDENT ANABAENA VARIABILIS  371-398 PROTEASE PRECURSOR PPRCA_THEAC PROTEASOME, ALPHA THERMOPLASMA ACIDOPHILUM  88-115 SUBUNIT PPRC_ECOLI TAIL-SPECIFIC PROTEASE ESCHERICHIA COLI  158-192  366-393 PROCURSOR PPRE1_STAAU PLASMID RECOMBINATION STAPHYLOCOCCUS AUREUS  27-78  152-179  264-347 ENZYME PPRE2_STAAU PLASMID RECOMBINATION STAPHYLOCOCCUS AUREUS  48-75  181-208  310-361  366-393 ENZYME PPREA_LACPL PLASMID RECOMBINATION LACTOBACILLUS PLANTARUM  37-71  291-318 ENZYME PPRE_BACLI REGULATORY PROTEIN BACILLUS LICHENIFORMIS   2-40 PPRE_BACSP PLASMID RECOMBINATION BACILLUS SP  181-224  288-345 ENZYME PPRE_STRAG PLASMID RECOMBINATION STREPTOCOCCUS AGALACTIAE  285-319  332-359  420-454 ENZYME PPRFA_LISMO LISTERIOLYSIN REGULA- LISTERIA MONOCYTOGENES  76-110  173-204 TORY PROTEIN PPRIA_ECOLI PRIMOSOMAL PROTEIN N′ ESCHERICHIA COLI  218-245 PPRIM_BACSU DNA PRIMASE BACILLUS SUBTILIS  383-433 PPRIM_BUCAP DNA PRIMASE BUCHNERA APHIDICOLA  13-43  282-319 PPRIM_CLOAB DNA PRIMASE CLOSTRIDIUM ACETOBUTYLICUM  87-114 PPRIM_LACLA DNA PRIMASE LACTOCOCCUS LACTIS  269-296 PPRIM_RICPR DNA PRIMASE RICKETTSIA PROWAZEKII  10-37  245-286  477-504  526-593 PPRIS_DESDE PRISMANE PROTEIN DESULFOVIBRIO DESULFURICANS  30-57 PPRLB_ACHLY BETA-LYTIC METALLOENDO- ACHROMOBACTER LYTICUS  317-344 PEPTIDASE PPRLB_LYSEN BETA-LYTIC METALLOENDO- LYSOBACTER ENZYMOGENES  121-148 PEPTIDASE PPRO1_LISMO ZINC METALLOPROTEINASE LISTERIA MONOCYTOGENES  111-145  275-316 PRECURSOR PPRO2_LISMO ZINC METALLOPROTEINASE LISTERIA MONOCYTOGENES  111-145 PRECURSOR PPROA_SERMA GAMMA-GLUTAMYL SERRATIA MARCESCENS  309-336 PHOSPHATE REDUCTASE PPROA_STAAU PROTEIN A PRECURSOR STAPHYLOCOCCUS AUREUS   2-29 PPROB_SERMA GLUTAMATE 5-KINASE SERRATIA MARCESCENS   7-34 PPROB_STRAG PROTEIN B STREPTOCOCCUS AGALACTIAE  58-85 PPROC_PSEAE PYRROLINE-5- PSEUDOMONAS AERUGINOSA  148-175 CARBOXYLATE REDUCTASE PPROH_BACSU PYRROLINE-5- BACILLUS SUBTILIS  200-227 CARBOXYLATE REDUCTASE HOMOL PPROP_ECOLI PROLINE/BETAINE ESCHERICHIA COLI  460-487 TRANSPORTER PPROV_ECOLI PERIPHERAL MEMBRANE ESCHERICHIA COLI  24-54 PROTEIN PROV PPROV_SALTY PERIPHERAL MEMBRANE SALMONELLA TYPHIMURIUM  24-54 PROTEIN PROV PPRRB_ECOLI PRRB PROTEIN ESCHERICHIA COLI  170-197 PPRRC_ECOLI ANTICODON NUCLEASE ESCHERICHIA COLI  282-309 PPRRD_ECOLI PRRD PROTEIN ESCHERICHIA COLI  278-305 PPRSA_BACSU PROTEIN EXPORT PROTEIN BACILLUS SUBTILIS  52-87  95-157 PRSA PRECURSOR PPRTA_STRGR PROTEASE A PRECURSOR STREPTOMYCES GRISEUS  56-110 PPRTC_ERWCH SECRETED PROTEASE C ERWINIA CHRYSANTHEMI  103-130 PRECURSOR PPRTC_PORGI COLLAGENASE PRECURSOR PORPHYROMONAS GINGIVALIS  285-312 PPRTD_ERWCH PROTEASES SECRETION ERWINIA CHRYSANTHEMI  328-355 PROTEIN PRTD PPRTE_BACNO EXTRACELLULAR SERINE BACTEROIDES NODOSUS  106-133  219-265  346-384 PROTEASE PRECURSOR PPRTE_ERWCH PROTEASES SECRETION ERWINIA CHRYSANTHEMI  108-135  158-192  231-290 PROTEIN PRTE PPRTF_ERWCH PROTEASES SECRETION ERWINIA CHRYSANTHEMI  280-310 PROTEIN PRTF PPRTM_LACLA PROTEASE MATURATION LACTOCOCCUS LACTIS  76-103  112-139 PROTEIN PRECURSOR PPRTM_LACLC PROTEASE MATURATION LACTOCOCCUS LACTIS  26-53  76-103  112-139 PROTEIN PRECURSOR PPRTM_LACPA PROTEASE MATURATION LACTOBACILLUS PARACASEI  76-103  112-139 PROTEIN PRECURSOR PPRTS_SERMA EXTRACELLULAR SERINE SERRATIA MARCESCENS  304-331  576-607 1007-1041 PROTEASE PRECURSOR PPRTT_SERMA EXTRACELLULAR SERINE SERRATIA MARCESCENS  304-331  463-491 1007-1041 PROTEASE PRECURSOR PPRTX_ERWCH SECRETED PROTEASE C ERWINIA CHRYSANTHEMI  314-341 PRECURSOR PPSAA_SYNEN CHLOROPHYLL A SYNECHOCOCCUS ELONGATUS  120-147 APOPROTEIN A1 NAEGEL PPSAA_SYNP2 CHLOROPHYLL A SYNECHOCOCCUS SP  109-136  326-356 APOPROTEIN A1 PPSAA_SYNVU CHLOROPHYLL A SYNECHOCOCCUS VULCANUS  120-147 APOPROTEIN A1 PPSAA_SYNY3 CHLOROPHYLL A SYNECHOCYSTIS SP  44-71  120-147  338-368 APOPROTEIN A1 PPSAB_YERPE CHAPERONE PROTEIN PSAB YERSINIA PESTIS  244-271 PRECURSOR PPSAD_SYNP6 PHOTOSYSTEM 1 REACTION SYNECHOCOCCUS SP  11-38 CENTRE SUBUNIT II PPSAE_YERPE PSAE PROTEIN PRECURSOR YERSINIA PESTIS  66-118 PPSBO_ANANI STABILIZING POLYPEPTIDE ANACYSTIS NIDULANS  99-126  209-243 PRECURSOR PPSPA_ECOLI PHAGE SHOCK PROTEIN A ESCHERICHIA COLI  55-82 PPSRA_WOLSU POLYSULFIDE REDUCTASE WOLINELLA SUCCINOGENES  114-141 CHAIN A PRECURSOR PPSTS_ECOLI PHOSPHATE-BINDING ESCHERICHIA COLI  40-74 PROTEIN PRECURSOR PPT1_BACSU PHOSPHOTRANSFERASE BACILLUS SUBTILIS  26-60 PPT1_ECOLI PHOSPHOTRANSFERASE ESCHERICHIA COLI  135-162  399-426 PPT1_SALTY PHOSPHOTRANSFERASE SALMONELLA TYPHIMURIUM  232-259  399-426 PPT1_STACA PHOSPHOTRANSFERASE STAPHYLOCOCCUS CARNOSUS  34-61 PPT1_STRSL PHOSPHOTRANSFERASE STREPTOCOCCUS SALIVARIUS  34-61  198-232 PPT2B_ERWCH PHOSPHOTRANSFERASE ERWINIA CHRYSANTHEMI  127-154 ENZYME II PPT2G_BACSU PHOSPHOTRANSFERASE BACILLUS SUBTILIS  670-697 ENZYME II PPT2L_LACCA PHOSPHOTRANSFERASE LACTOBACILLUS CASEI  537-564 ENZYME II PPT2L_LACLA PHOSPHOTRANSFERASE LACTOCOCCUS LACTIS  183-214  409-436 ENZYME II PPT2L_STAAU PHOSPHOTRANSFERASE STAPHYLOCOCCUS AUREUS  421-448  530-557 ENZYME II PPT2M_ECOLI PHOSPHOTRANSFERASE ESCHERICHIA COLI  445-489 ENZYME II PPT2M_STACA PHOSPHOTRANSFERASE STAPHYLOCOCCUS CARNOSUS  388-415 ENZYME II PPT2N_ECOLI N-ACETYLGLUCOSAMINE- ESCHERICHIA COLI  370-400 PERMEASE PPT2S_STRMU PHOSPHOTRANSFERASE STREPTOCOCCUS MUTANS  600-627 ENZYME II PPT3F_SALTY PHOSPHOTRANSFERASE SALMONELLA TYPHIMURIUM  107-134 FPR PROTEIN PPT3L_LACCA PHOSPHOTRANSFERASE LACTOBACILLUS CASEI  40-67 FACTOR III PPTHP_ECOLI PHOSPHOCARRIER PROTEIN ESCHERICHIA COLI &  31-65 HPR SALMONELLA TYPHIMURIUM PPTHP_KLEPN PHOSPHOCARRIER PROTEIN KLEBSIELLA PNEUMONIAE  31-65 HPR PPTRB_ECOLI PROTEASE II ESCHERICHIA COLI  94-121  217-251 PPULA_KLEAE PULLULANASE KLEBSIELLA AEROGENES  894-928 PPULA_KLEPN PULLULANASE KLEBSIELLA PNEUMONIAE  894-918 PPULO_KLEPN LEADER PEPTIDASE KLEBSIELLA PNEUMONIAE  178-205 PPULS_KLEPN PULS PRECURSOR KLEBSIELLA PNEUMONIAE  70-97 PPUPA_PSEPU UPTAKE PROTEIN PSEUDOMONAS PUTIDA  112-162  210-237  429-463  736-763 PRECURSOR PPUR1_BACSU AMIDOPHOSPHORIBOSYL- BACILLUS SUBTILIS  394-421 TRANSF PREC PPUR2_BACSU PHOSPHORIBOSYLAMINE-- BACILLUS SUBTILIS  349-376 GLYCINE LIGASE PPUR3_BACSU FORMYLTRANSFERASE BACILLUS SUBTILIS  149-176 PPUR3_ECOLI FORMYLTRANSFERASE ESCHERICHIA COLI  27-54 PPUR4_BACSU SYNTHASE I BACILLUS SUBTILIS  18-45 PPUR5_BACSU CYCLO-LIGASE BACILLUS SUBTILIS  153-194 PPUR6_ECOLI AIR CARBOXYLASE ESCHERICHIA COLI  131-158 PPUR7_BACSU SAICAR SYNTHETASE BACILLUS SUBTILIS   3-43 PPUR8_BACSU ADENYLOSUCCINATE LYASE BACILLUS SUBTILIS  56-130  226-253 PPUR8_ECOLI ADENYLOSUCCINATE LYASE ESCHERICHIA COLI  194-221  331-372 PPUR9_BACSU AICAR TRANSFORMYLASE BACILLUS SUBTILIS  19-53  345-372 PPUR9_ECOLI AICAR TRANSFORMYLASE ESCHERICHIA COLI  239-268 PPUR9_SALTY AICAR TRANSFORMYLASE SALMONELLA TYPHIMURIUM  218-247 PPURL_BACSU SYNTHASE II BACILLUS SUBTILIS  609-636 PPYG1_ANASP LINKER POLYPEPTIDE CPCG1 ANABAENA SP  88-115 PPYG1_MASLA LINKER POLYPEPTIDE CPCG1 MASTIGOCLADUS LAMINOSUS  89-116 PPYG2_ANASP LINKER POLYPEPTIDE CPCG2 ANABAENA SP  88-115 PPYG2_MASLA LINKER POLYPEPTIDE CPCG2 MASTIGOCLADUS LAMINOSUS  89-116 PPYG3_MASLA LINKER POLYPEPTIDE CPCG3 MASTIGOCLADUS LAMINOSUS  91-132 PPYG4_ANASP LINKER POLYPEPTIDE CPCG4 ANABAENA SP  90-131 PPYR1_ANASP 32.1 KD LINKER POLYPEPTIDE ANABAENA SP  35-62 PPYR2_FREDI 27.9 KD LINKER POLYPEPTIDE FREMYELLA DIPLOSIPHON  105-132 PPYR4_FREDI 31.6 KD LINKER POLYPEPTIDE FREMYELLA DIPLOSIPHON  22-66 PPYR5_FREDI 37.5 KD LINKER POLYPEPTIDE FREMYELLA DIPLOSIPHON  106-143 PPYR6_FREDI 30.8 KD LINKER POLYPEPTIDE FREMYELLA DIPLOSIPHON  43-70  113-140 PPYRB_BACSU ASPARTATE CARBAMOYL- BACILLUS SUBTILIS   9-36 TRANSFERASE PPYRB_SERMA ASPARTATE CARBAMOYL- SERRATIA MARCESCENS  70-97 TRANSFERASE PPYRD_ECOLI DIHYDROOROTATE ESCHERICHIA COLI  115-142 DEHYDROGENASE PPYRD_SALTY DIHYDROOROTATE SALMONELLA TYPHIMURIUM  115-142  183-210 DEHYDROGENASE PPYRG_BACSU CTP SYNTHASE BACILLUS SUBTILIS  275-302  322-349 PPYS1_FREDI PHYCOBILISOME 9.7 KD FREMYELLA DIPLOSIPHON  21-48 LINKER POLYPEPTIDE PQOR_ECOLI QUINONE OXIDOREDUCTASE ESCHERICHIA COLI  180-215 PQUEA_ECOLI QUEUOSINE BIOSYNTHESIS ESCHERICHIA COLI  234-261 PROTEIN QUEA PR34K_CLOPA 34.2 KD PROTEIN IN CLOSTRIDIUM PASTEURIANUM  23-50  157-232 RUBREDOXIN OPERON PRACC_ECOLI RACC PROTEIN ESCHERICHIA COLI   5-32 PRACD_STRTR ASPARTATE RACEMASE STREPTOCOCCUS THERMOPHILUS  152-189 PRACX_BACSU PROBABLE AMINO ACID BACILLUS SUBTILIS  132-162 RACEMASE PRAFA_ECOLI ALPHA-GALACTOSIDASE ESCHERICHIA COLI  89-116 PRAFD_ECOLI RAFFINOSE INVERTASE ESCHERICHIA COLI  348-375 PRBSC_ECOLI RIBOSE TRANSPORT SYSTEM ESCHERICHIA COLI  65-99  195-222 COMPONENT PRBSK_ECOLI RIBOKINASE ESCHERICHIA COLI  200-239 PRBTR_KLEAE RIBITOL (RBT) OPERON KLEBSIELLA AEROGENES   6-47 REPRESSOR PRCSA_ECOLI BIOSYNTHESIS ACTIVATION ESCHERICHIA COLI  170-197 PROTEIN A PRCSA_ERWAM BIOSYNTHESIS ACTIVATION ERWINIA AMYLOVORA  92-119  174-201 PROTEIN A PRCSA_ERWST BIOSYNTHESIS ACTIVATION ERWINIA STEWARTII  174-201 PROTEIN A PRCSA_KLEAE BIOSYNTHESIS ACTIVATION KLEBSIELLA AEROGENES  168-205 PROTEIN A PRCSB_ECOLI CAPSULE SYNTHESIS B ESCHERICHIA COLI  14-41  159-186 COMPONENT PREC2_LEGPN RECA PROTEIN LEGIONELLA PNEUMOPHILA  262-310 PRECA_ACHLA RECA PROTEIN ACHOLEPLASMA LAIDLAWII  283-310 PRECA_AGRTU RECA PROTEIN AGROBACTERIUM TUMEFACIENS   3-30  132-159  281-308 PRECA_ANAVA RECA PROTEIN ANABAENA VARIABILIS  322-349 PRECA_AQUPY RECA PROTEIN AQUIFEX PYROPHILUS  63-90  126-153 PRECA_BACFR RECA PROTEIN BACTEROIDES FRAGILIS  108-135 PRECA_BACSU RECE PROTEIN BACILLUS SUBTILIS  267-294 PRECA_BRUAB RECA PROTEIN BRUCELLA ABORTUS   3-30  132-159  280-307 PRECA_BURCE RECA PROTEIN BURKHOLDERIA CEPACIA  75-109 PRECA_ERWCA RECA PROTEIN ERWINIA CAROTOVORA  284-311 PRECA_LACDE RECA PROTEIN LACTOBACILLUS DELBRUECKII  20-47 PRECA_LACHE RECA PROTEIN LACTOBACILLUS HELVETICUS  20-47 PRECA_LACLA RECA PROTEIN LACTOCOCCUS LACTIS  135-162  232-269  288-315 PRECA_METCL RECA PROTEIN METHYLOMONAS CLARA  266-303 PRECA_METFL RECA PROTEIN METHYLOBACILLUS FLAGELLATUM  276-303 PRECA_MYCPU RECA PROTEIN MYCOPLASMA PULMONIS  30-57 PRECA_MYCTU RECA PROTEIN MYCOBACTERIUM TUBERCULOSIS  749-776 PRECA_NEIGO RECA PROTEIN NEISSERIA GONORRHOEAE  263-310 PRECA_PROMI RECA PROTEIN PROTEUS MIRABILIS  283-310 PRECA_PSEAE RECA PROTEIN PSEUDOMONAS AERUGINOSA  282-309 PRECA_RHILP RECA PROTEIN RHIZOBIUM LEGUMINOSARUM   3-30  131-158  280-307 PRECA_RHILV RECA PROTEIN RHIZOBIUM LEGUMINOSARUM  119-146  268-295 PRECA_RHIME RECA PROTEIN RHIZOBIUM MELILOTI  119-146  268-295 PRECA_RHOSH RECA PROTEIN RHODOBACTER SPHAEROIDES  119-146 PRECA_STRPN RECA PROTEIN STREPTOCOCCUS PNEUMONIAE  134-161  293-327 PRECA_SYNP2 RECA PROTEIN SYNECHOCOCCUS SP  124-151 PRECA_VIBCH RECA PROTEIN VIBRIO CHOLERAE  290-317 PRECF_BACSU RECF PROTEIN BACILLUS SUBTILIS   4-31  178-205 PRECF_ECOLI RECF PROTEIN ESCHERICHIA COLI  82-109  147-174 PRECF_PROMI RECF PROTEIN PROTEUS MIRABILIS  86-113 PRECF_PSEPU RECF PROTEIN PSEUDOMONAS PUTIDA  84-111 PRECF_SALTY RECF PROTEIN SALMONELLA TYPHIMURIUM  147-174 PRECJ_ECOLI EXONUCLEASE RECJ ESCHERICHIA COLI  52-79 PRECN_BACSU RECOMBINATION PROTEIN BACILLUS SUBTILIS  21-48  156-184  192-247  299-336  344-378 PRECQ_ECOLI DNA HELICASE RECQ ESCHERICHIA COLI  468-495 PRELA_ECOLI GTP PYROPHOSPHOKINASE ESCHERICHIA COLI  680-707 PREMA_BACSU REPLICATION AND BACILLUS SUBTILIS   2-36  81-108 MAINTENANCE PROTEIN PREMA_STAAU REPLICATION AND STAPHYLOCOCCUS AUREUS   2-36  81-108 MAINTENANCE PROTEIN PREMA_STAEP REPLICATION AND STAPHYLOCOCCUS EPIDERMIDIS   2-36  81-108 MAINTENANCE PROTEIN PREP5_ECOLI REPLICATION PROTEIN REPA ESCHERICHIA COLI  50-77  90-117 PREPA_BACSU REPA PROTEIN BACILLUS SUBTILIS  342-373 PREPA_ECOLI REPA PROTEIN ESCHERICHIA COLI  91-118  228-255 PREPA_NEIGO REPLICATION PROTEIN NEISSERIA GONORRHOEAE  57-84  138-172 PREPB_LACPL REPLICATION PROTEIN LACTOBACILLUS PLANTARUM  184-211 REPB PREPM_STAAU REPLICATION INITIATION STAPHYLOCOCCUS AUREUS  254-284 PROTEIN PREPN_STAAU REPLICATION INITIATION STAPHYLOCOCCUS AUREUS  258-285 PROTEIN PREPR_STRAG REPR PROTEIN STREPTOCOCCUS AGALACTIAE  430-467 PREPS_STRPY REPS PROTEIN STREPTOCOCCUS PYOGENES  423-467 PREPX_STAAU REP PROTEIN STAPHYLOCOCCUS AUREUS  111-150  172-210 PREPY_ECOLI REPLICATION INITIATION ESCHERICHIA COLI  288-315 PROTEIN PREP_CLOPE REPLICATION PROTEIN CLOSTRIDIUM PERFRINGENS  168-195  297-324  343-375 PREP_ECOLI REP HELICASE ESCHERICHIA COLI  119-146  205-243 PREP_LACPL REP PROTEIN LACTOBACILLUS PLANTARUM  119-199  260-287 PRESP_CLOPE RESOLVASE CLOSTRIDIUM PERFRINGENS  68-102  151-185 PRF2_BACSU PROBABLE PEPTIDE CHAIN BACILLUS SUBTILIS  34-68 RELEASE FACTOR 2 PRF2_ECOLI PEPTIDE CHAIN RELEASE ESCHERICHIA COLI  86-113  163-204 FACTOR 2 PRF2_SALTY PEPTIDE CHAIN RELEASE SALMONELLA TYPHIMURIUM  86-113  163-204 FACTOR 2 PRF3_ECOLI PEPTIDE CHAIN RELEASE ESCHERICHIA COLI  180-210  443-473 FACTOR 3 PRFAB_ECOLI 1,6-GALACTOSYL- ESCHERICHIA COLI  199-226 TRANSFERASE PRFAG_ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI  185-212 RFAG PRFAJ_ECOLI 1,2-GLUCOSYLTRANSFERASE ESCHERICHIA COLI  39-66  233-268 PRFAJ_SALTY 1,2-GLUCOSYLTRANSFERASE SALMONELLA TYPHIMURIUM  68-95  145-172  236-263 PRFAK_SALTY 1,2-N-ACETYLGLUCOSAMINE- SALMONELLA TYPHIMURIUM  335-369 TRANSFERASE PRFAL_ECOLI O-ANTIGEN LIGASE ESCHERICHIA COLI  366-393 PRFAL_SALTY O-ANTIGEN LIGASE SALMONELLA TYPHIMURIUM  326-360 PRFAP_ECOLI BIOSYNTHESIS PROTEIN RFAP ESCHERICHIA COLI   8-35 PRFAS_ECOLI BIOSYNTHESIS PROTEIN RFAS ESCHERICHIA COLI  62-89  184-240 PRFAY_ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI  18-45 RFAY PRFAZ_ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI   3-30  85-112 RFAZ PRFBB_SALTY DTDP-GLUCOSE 4,6- SALMONELLA TYPHIMURIUM  320-359 DEHYDRATASE PRFBM_SALTY MANNOSE-1-PHOSPHATE SALMONELLA TYPHIMURIUM  313-361 GUANYLYLTRANSFERASE PRFBS_SALTI PARATOSE SYNTHASE SALMONELLA TYPHI  22-56  205-232 PRFEA_VIBAN PRECURSOR FOR FERRIC VIBRIO ANGUILLARUM  349-376 ANGUIBACTIN PRFH_ECOLI PEPTIDE CHAIN RELEASE ESCHERICHIA COLI  83-110 FACTOR HOMOLOG PRG12_BACTU PUTATIVE G12 SITE-SPECIFIC BACILLUS THURINGIENSIS  15-68  190-262  310-383 RECOMBINASE PRHAB_ECOLI RHAMNULOKINASE ESCHERICHIA COLI  175-202 PRHAB_SALTY RHAMNULOKINASE SALMONELLA TYPHIMURIUM  175-202 PRHAR_ECOLI L-RHAMNOSE OPERON ESCHERICHIA COLI  10-41 TRANSACTIVATOR PRHAS_ECOLI L-RHAMNOSE OPERON REG ESCHERICHIA COLI  152-179 PROTEIN RHAS PRHIR_RHILV RHIR REGULATORY PROTEIN RHIZOBIUM LEGUMINOSARUM  206-233 PRHLB_ECOLI RNA HELICASE RHLB/MMRA ESCHERICHIA COLI  138-165 PRHO_BORBU TRANS TERM FACTOR RHO BORRELIA BURGDORFERI  215-242  327-369 PRHPR_BACSU PROTEASE PROD REG BACILLUS SUBTILIS  82-109 PROTEIN HPR PRHSA_ECOLI RHSA PROTEIN PRECURSOR ESCHERICHIA COLI  667-694 PRHSB_ECOLI RHSB PROTEIN PRECURSOR ESCHERICHIA COLI  667-694 PRHSC_ECOLI RHSC PROTEIN PRECURSOR ESCHERICHIA COLI  380-414  667-694 1056-1083 PRHSD_ECOLI RHSD PROTEIN PRECURSOR ESCHERICHIA COLI  671-712 1071-1098 PRHSE_ECOLI RHSE PROTEIN ESCHERICHIA COLI  345-372 PRIML_ECOLI ACETYLTRANSFERASE ESCHERICHIA COLI  93-127 PRIR2_ECOLI RIBONUCLEOSIDE- ESCHERICHIA COLI  167-194 DIPHOSPHATE REDUCTASE PRISA_PHOLE RIBOFLAVIN SYNTHASE PHOTOBACTERIUM LEIOGNATHI   2-47  131-158 ALPHA CHAIN PRISB_BACSU RIBOFLAVIN SYNTHASE BACILLUS SUBTILIS   8-35 BETA CHAIN PRISB_PHOLE RIBOFLAVIN SYNTHASE PHOTOBACTERIUM LEIOGNATHI  14-41 BETA CHAIN PRL10_STRAT 50S RIBOSOMAL PROTEIN L10 STREPTOMYCES ANTIBIOTICUS  14-72  106-133 PRL12_SYNY3 50S RIBOSOMAL PROTEIN L12 SYNECHOCYSTIS SP   2-34 PRL12_THEMA 50S RIBOSOMAL PROTEIN L12 THERMOTOGA MARITIMA   8-35  56-86 PRL14_BACST 50S RIBOSOMAL PROTEIN L14 BACILLUS STEAROTHERMOPHILUS  18-45 PRL14_MICLU 50S RIBOSOMAL PROTEIN L14 MICROCOCCUS LUTEUS  18-45 PRL14_MYCCA 50S RIBOSOMAL PROTEIN L14 MYCOPLASMA CAPRICOLUM  51-92 PRL15_BACLI 50S RIBOSOMAL PROTEIN L15 BACILLUS LICHENIFORMIS  21-48 PRL15_BACST 50S RIBOSOMAL PROTEIN L15 BACILLUS STEAROTHERMOPHILUS  95-134 PRL15_BACSU 50S RIBOSOMAL PROTEIN L15 BACILLUS SUBTILIS  95-122 PRL15_CHLTR 50S RIBOSOMAL PROTEIN L15 CHLAMYDIA TRACHOMATIS  110-144 PRL15_ECOLI 50S RIBOSOMAL PROTEIN L15 ESCHERICHIA COLI  79-113 PRL15_LACLA 50S RIBOSOMAL PROTEIN L15 LACTOCOCCUS LACTIS   8-35 PRL15_METVA 50S RIBOSOMAL PROTEIN L15 METHANOCOCCUS VANNIELII  68-102 PRL15_MYCCA 50S RIBOSOMAL PROTEIN L15 MYCOPLASMA CAPRICOLUM  63-135 PRL18_BACST 50S RIBOSOMAL PROTEIN L18 BACILLUS STEAROTHERMOPHILUS  31-58 PRL18_CHLTR 50S RIBOSOMAL PROTEIN L18 CHLAMYDIA TRACHOMATIS  32-86 PRL18_HALMA 50S RIBOSOMAL PROTEIN L18 HALOARCULA MARISMORTUI  80-107 PRL18_MYCCA 50S RIBOSOMAL PROTEIN L18 MYCOPLASMA CAPRICOLUM  61-88 PRL19_ECOLI 50S RIBOSOMAL PROTEIN L19 ESCHERICHIA COLI  25-52 PRL19_HALMA 50S RIBOSOMAL PROTEIN L19 HALOARCULA MARISMORTUI  101-128 PRL19_METVA PROBABLE 50S RIBOSOMAL METHANOCOCCUS VANNIELII  45-72 PROTEIN PRL1_PROVU 50S RIBOSOMAL PROTEIN L1 PROTEUS VULGARIS  159-194 PRL1_SULSO 50S RIBOSOMAL PROTEIN L1 SULFOLOBUS SOLFATARICUS   5-32  184-211 PRL20_ECOLI 50S RIBOSOMAL PROTEIN L20 ESCHERICHIA COLI  14-41 PRL20_MYCFE 50S RIBOSOMAL PROTEIN L20 MYCOPLASMA FERMENTANS  14-41 PRL21_BACSU 50S RIBOSOMAL PROTEIN L21 BACILLUS SUBTILIS   4-38 PRL22_ECOLI 50S RIBOSOMAL PROTEIN L22 ESCHERICHIA COLI  28-55 PRL23_METVA 50S RIBOSOMAL PROTEIN L23 METHANOCOCCUS VANNIELII  30-57 PRL23_MYCCA 50S RIBOSOMAL PROTEIN L23 MYCOPLASMA CAPRICOLUM  32-59 PRL24_HALMA 50S RIBOSOMAL PROTEIN L24 HALOARCULA MARISMORTUI  48-75 PRL24_METVA 50S RIBOSOMAL PROTEIN L24 METHANOCOCCUS VANNIELII  61-90 PRL24_MICLU 50S RIBOSOMAL PROTEIN L24 MICROCOCCUS LUTEUS  36-63 PRL29_CHLTR 50S RIBOSOMAL PROTEIN L29 CHLAMYDIA TRACHOMATIS  39-66 PRL29_ECOLI 50S RIBOSOMAL PROTEIN L29 ESCHERICHIA COLI  36-63 PRL29_MYCCA 50S RIBOSOMAL PROTEIN L29 MYCOPLASMA CAPRICOLUM  39-85 PRL4_BACST 50S RIBOSOMAL PROTEIN L4 BACILLUS STEAROTHERMOPHILUS  141-168 PRL4_MYCCA 50S RIBOSOMAL PROTEIN L4 MYCOPLASMA CAPRICOLUM  144-198 PRL5_THETH 50S RIBOSOMAL PROTEIN L5 THERMUS AQUATICUS  38-65 PRL6_BACST 50S RIBOSOMAL PROTEIN L6 BACILLUS STEAROTHERMOPHILUS  79-106 PRL6_ECOLI 50S RIBOSOMAL PROTEIN L6 ESCHERICHIA COLI  19-46 PRL6_METVA 50S RIBOSOMAL PROTEIN L6 METHANOCOCCUS VANNIELII  129-159 PRL9_BACST 50S RIBOSOMAL PROTEIN L9 BACILLUS STEAROTHERMOPHILUS  47-77 PRL9_ECOLI 50S RIBOSOMAL PROTEIN L9 ESCHERICHIA COLI  122-149 PRLA0_HALCU ACIDIC RIBOSOMAL PROTEIN HALBACTERIUM CUTIRUBRUM  138-182 P0 HOMOLOG PRLA0_HALHA ACIDIC RIBOSOMAL PROTEIN HALOBACTERIUM HALOBIUM  138-182 P0 HOMOLOG PRLA0_HALMA ACIDIC RIBOSOMAL PROTEIN HALOARCULA MARISMORTUI  64-91  153-184 P0 HOMOLOG PRLA0_METVA ACIDIC RIBOSOMAL PROTEIN METHANOCOCCUS VANNIELII  194-221 P0 HOMOLOG PRLA_HALEU RIBOSOMAL PROTEIN ‘A’ HALOPHILIC EUBACTERIUM  59-86 NRCC 41227 PRLA_HALHA 50S RIBOSOMAL PROTEIN L20 HALOBACTERIUM HALOBIUM   2-29 PRLA_HALMA 50S RIBOSOMAL PROTEIN L12 HALOARCULA MARISMORTUI   2-29 PRLA_METVA RIBOSOMAL PROTEIN ‘A’ METHANOCOCCUS VANNIELII   2-29 PRLA_MICLU 50S RIBOSOMAL PROTEIN MA MICROCOCCUS LUTEUS  55-82  90-117 PRLX1_SALTY 43 KD RELAXATION PROTEIN SALMONELLA TYPHIMURIUM  226-260 PRLX1_STAAU RLX PROTEIN STAPHYLOCOCCUS AUREUS   3-30  102-132  177-218  266-300 PRLX2_SALTY 22 KD RELAXATION PROTEIN SALMONELLA TYPHIMURIUM  19-53 PRLX2_STAAU RLX PROTEIN STAPHYLOCOCCUS AUREUS   3-30  102-133  261-295 PRLX3_STAAU RLX PROTEIN STAPHYLOCOCCUS AUREUS   3-30  146-216 PRLX_SULSO 50S RIBOSOMAL PROTEIN LX SULFOLOBUS SOLFATARICUS  32-62 PRNBR_BACAM RIBONUCLEASE PRECURSOR BACILLUS AMYLOLIQUEFACIENS  33-67  129-156 PRNC_ECOLI RIBONUCLEASE III ESCHERICHIA COLI  10-37  117-144 PRNE_ECOLI RIBONUCLEASE E ESCHERICHIA COLI  413-440  628-662 PRNPA_BUCAP RIBONUCLEASE P PROTEIN BUCHNERA APHIDICOLA  85-114 COMPONENT PRNPH_BACSU RIBONUCLEASE PH BACILLUS SUBTILIS  159-186 PRNS_ECOLI REGULATORY PROTEIN RNS ESCHERICHIA COLI  116-160 PRN_BACCI RIBONUCLEASE BACILLUS CIRCULANS  82-109 PRN_BACIN RIBONUCLEASE PRECURSOR BACILLUS INTERMEDIUS  38-72 PRP28_BACTK RNA POLYMERASE SIGMA-28 BACILLUS THURINGIENSIS  73-107 FACTOR PRECURSOR PRP32_CITFR RNA POLYMERASE SIGMA-32 CITROBACTER FREUNDII  30-57 FACTOR PRP35_BACTK RNA POLYMERASE SIGMA-35 BACILLUS THURINGIENSIS   8-35  63-90 FACTOR PRECURSOR PRP54_ALCEU RNA POLYMERASE SIGMA-54 ALCALIGENES EUTROPHUS  229-266 FACTOR PRP54_AZOCA RNA POLYMERASE SIGMA-54 AZORHIZOBIUM CAULINODANS  174-208 FACTOR PRP54_BACSU RNA POLYMERASE SIGMA-54 BACILLUS SUBTILIS  16-43  97-124  274-308  396-423 FACTOR PRP54_BRAJA RNA POLYMERASE SIGMA-54 BRADYRHIZOBIUM JAPONICUM  97-124 FACTOR 1 PRP54_KLEPN RNA POLYMERASE SIGMA-54 KLEBSIELLA PNEUMONIAE  148-182 FACTOR PRP54_RHOCA RNA POLYMERASE SIGMA-54 RHODOBACTER CAPSULATUS  155-185 FACTOR PRP55_BRAJA RNA POLYMERASE SIGMA-54 BRADYRHIZOBIUM JAPONICUM  145-172 FACTOR 2 PRP5M_ALCEU PROBABLE SIGMA (54) ALCALIGENES EUTROPHUS  21-51 MODULATION PROTEIN PRP5M_ECOLI PROBABLE SIGMA (54) ESCHERICHIA COLI  21-67 MODULATION PROTEIN PRP5M_SALTY PROBABLE SIGMA (54) SALMONELLA TYPHIMURIUM  21-67 MODULATION PROTEIN PRP70_BUCAP RNA POLYMERASE SIGMA-70 BUCHNERA APHIDICOLA  69-96  109-136  173-217  228-255  303-337 FACTOR PRP70_CHLTR RNA POLYMERASE SIGMA-70 CHLAMYDIA TRACHOMATIS   5-32 FACTOR PRP70_ECOLI RNA POLYMERASE SIGMA-70 ESCHERICHIA COLI  327-361 FACTOR PRP70_PSEAE RNA POLYMERASE SIGMA-70 PSEUDOMONAS AERUGINOSA  334-368 FACTOR PRP70_RICPR RNA POLYMERASE SIGMA-70 RICKETTSIA PROWAZEKII  244-321  348-382 FACTOR PRP80_MYXXA RNA POLYMERASE SIGMA-80 MYXOCOCCUS XANTHUS  208-235  318-347  359-386 FACTOR PRPCF_SYNPY BILIN BIOSYNTHESIS SYNECHOCOCCUS SP  180-207 PROTEIN RPCF PRPOA_BACSU DNA-DIRECTED RNA BACILLUS SUBTILIS  55-107 POLYMERASE ALPHA CHAIN PRPOA_ECOLI A-DIRECTED RNA ESCHERICHIA COLI &  57-105 POLYMERASE ALPHA CHAIN SALMONELLA TYPHIMURIUM PRPOA_HALHA DNA-DIRECTED RNA HALOBACTERIUM HALOBIUM  863-904 POLYMERASE SUBUNIT A PRPOA_HALMO A-DIRECTED RNA HALOCOCCUS MORRHUAE  229-270 POLYMERASE SUBUNIT A PRPOA_METTH DNA-DIRECTED RNA METHANOBACTERIUM  218-245  486-513  642-669 POLYMERASE SUBUNIT A THERMOAUTOTROPHICU PRPOA_SULAC DNA-DIRECTED RNA SULFOLOBUS ACIDOCALDARIUS  222-256  500-527  693-720 POLYMERASE SUBUNIT A PRPOA_THECE DNA-DIRECTED RNA THERMOCOCCUS CELER  228-262 POLYMERASE SUBUNIT A′ PRPOB_ECOLI DNA-DIRECTED RNA ESCHERICHIA COLI  599-626 1011-1038 POLYMERASE BETA CHAIN PRPOB_MYCLE DNA-DIRECTED RNA MYCOBACTERIUM LEPRAE  723-760 1084-1111 POLYMERASE BETA CHAIN PRPOB_SALTY A-DIRECTED RNA SALMONELLA TYPHIMURIUM  599-626  958-985 1011-1038 POLYMERASE BETA CHAIN PRPOB_SULAC A-DIRECTED RNA SULFOLOBUS ACIDOCALDARIUS  160-187  255-282  534-561  827-861 POLYMERASE SUBUNIT B PRPOB_THEMA A-DIRECTED RNA THERMOTOGA MARITIMA  350-377 POLYMERASE BETA CHAIN PRPOC_ANASP DNA-DIRECTED RNA ANABAENA SP  152-194 POLYMERASE GAMMA CHAIN PRPOC_ECOLI DNA-DIRECTED RNA ESCHERICHIA COLI  786-813  948-994 1223-1257 POLYMERASE BETA′ CHAIN PRPOC_HALHA DNA-DIRECTED RNA HALOBACTERIUM HALOBIUM  175-202 POLYMERASE SUBUNIT C PRPOC_HALMO DNA-DIRECTED RNA HALOCOCCUS MORRHUAE  27-54  117-144  207-234 POLYMERASE SUBUNIT C PRPOC_METTH DNA-DIRECTED RNA METHANOBACTERIUM  58-85  272-302  327-354 POLYMERASE SUBUNIT C THERMOAUTOTROPHICU PRPOC_MYCLE A-DIRECTED RNA MYCOBACTERIUM LEPRAE  273-300  860-887  911-938 1131-1158 POLYMERASE BETA′ CHAIN PRPOC_NOSCO DNA-DIRECTED RNA NOSTOC COMMUNE  150-192 POLYMERASE GAMMA CHAIN PRPOC_SULAC DNA-DIRECTED RNA SULFOLOBUS ACIDOCALDARIUS  36-63  172-214  224-251 POLYMERASE SUBUNIT C PRPOC_THECE DNA-DIRECTED RNA THERMOCOCCUS CELER  21-58 POLYMERASE SUBUNIT A″ PRPOD_NOSCO DNA-DIRECTED RNA NOSTOC COMMUNE  72-116  402-449  539-566 POLYMERASE DELTA CHAIN PRPOE_ECOLI RNA POLYMERASE SIGMA-E ESCHERICHIA COLI   5-39 FACTOR PRPOS_ECOLI RNA POLYMERASE SIGMA ESCHERICHIA COLI  281-308 FACTOR KATF PRPOU_HALHA DNA-DIRECTED RNA HALOBACTERIUM HALOBIUM  91-118 POLYMERASE SUBUNIT B′ PRPSA_AGRTU RNA POLYMERASE SIGMA-A AGROBACTERIUM TUMEFACIENS  310-347  397-427 FACTOR PRPSA_ANASP RNA POLYMERASE SIGMA-A ANABAENA SP  71-105 FACTOR PRPSA_CLOAB RNA POLYMERASE SIGMA-A CLOSTRIDIUM ACETOBUTYLICUM   2-29 FACTOR PRPSA_STRAU RNA POLYMERASE SIGMA STREPTOMYCES AUREOFACIENS  278-305 FACTOR RPOD PRPSB_ANASP RNA POLYMERASE SIGMA-B ANABAENA SP   4-31 FACTOR PRPSB_BACSU RNA POLYMERASE SIGMA-B BACILLUS SUBTILIS   5-35  169-196  200-230 FACTOR PRPSB_MYXXA RNA POLYMERASE SIGMA-B MYXOCOCCUS XANTHUS  47-74 FACTOR PRPSB_STIAU RNA POLYMERASE SIGMA-B STIGMATELLA AURANTIACA  96-123 FACTOR PRPSC_ANASP RNA POLYMERASE SIGMA-C ANABAENA SP  58-85 FACTOR PRPSD_BACSU RNA POLYMERASE SIGMA-D BACILLUS SUBTILIS  192-249 FACTOR PRPSE_BACSU RNA POLYMERASE SIGMA-E BACILLUS SUBTILIS  63-90 FACTOR PRECURSOR PRPSE_CLOAB RNA POLYMERASE SIGMA-E CLOSTRIDIUM ACETOBUTYLICUM  14-41  116-160 FACTOR PRPSF_BACLI RNA POLYMERASE SIGMA-F BACILLUS LICHENIFORMIS   4-31  191-248 FACTOR PRPSF_BACME RNA POLYMERASE SIGMA-F BACILLUS MEGATERIUM  191-225 FACTOR PRPSF_BACSU RNA POLYMERASE SIGMA-F BACILLUS SUBTILIS   4-41  191-248 FACTOR PRPSH_BACLI RNA POLYMERASE SIGMA-H BACILLUS LICHENIFORMIS  191-218 FACTOR PRPSH_BACSU RNA POLYMERASE SIGMA-H BACILLUS SUBTILIS  186-213 FACTOR PRPSK_BACSU RNA POLYMERASE SIGMA-K BACILLUS SUBTILIS  75-109  189-216 FACTOR PRPSP_STAAU RNA POLYMERASE SIGMA STAPHYLOCOCCUS AUREUS  19-46 FACTOR PLAC PRPSW_STRCO RNA POLYMERASE SIGMA STREPOMYCES COELICOLOR  232-273 FACTOR WHIG PRPSX_BACTK POSSIBLE RNA POLYMERASE BACILLUS THURINGIENSIS  33-60 SIGMA-G FACTOR PRS10_ECOLI 30S RIBOSOMAL PROTEIN S10 ESCHERICHIA COLI   3-30 PRS11_BACSU 30S RIBOSOMAL PROTEIN S11 BACILLUS SUBTILIS   8-42 PRS13_BACSU 30S RIBOSOMAL PROTEIN S13 BACILLUS SUBTILIS  44-85 PRS17_METVA 30S RIBOSOMAL PROTEIN S17 METHANOCOCCUS VANNIELII  34-73 PRS1_ECOLI 30S RIBOSOMAL PROTEIN S1 ESCHERICHIA COLI  99-126  144-171 PRS1_PROSP 30S RIBOSOMAL PROTEIN S1 PROVIDENCIA SP  39-66  265-292  349-376 PRS1_RHIME 30S RIBOSOMAL PROTEIN S1 RHIZOBIUM MELILOTI  91-125  172-217 PRS21_BACST 30S RIBOSOMAL PROTEIN S21 BACILLUS STEAROTHERMOPHILUS   1-28 PRS2_SPICI 30S RIBOSOMAL PROTEIN S2 SPIROPLASMA CITRI  91-125 PRS3_ACHLA 30S RIBOSOMAL PROTEIN S3 ACHOLEPLASMA LAIDLAWII  83-110 PRS3_MYCCA 30S RIBOSOMAL PROTEIN S3 MYCOPLASMA CAPRICOLUM  77-106  136-163 PRS4_ECOLI 30S RIBOSOMAL PROTEIN S4 ESCHERICHIA COLI  50-77 PRS5_HALMA 30S RIBOSOMAL PROTEIN S5 HALOARCULA MARISMORTUI  160-187 PRS5_MYCCA 30S RIBOSOMAL PROTEIN S5 MYCOPLASMA CAPRICOLUM  35-62  182-216 PRS6_THETH 30S RIBOSOMAL PROTEIN S6 THERMUS AQUATICUS  16-43 PRS7_METVA 30S RIBOSOMAL PROTEIN S7 METHANOCOCCUS VANNIELII  69-96 PRS7_MYCLE 30S RIBOSOMAL PROTEIN S7 MYCOBACTERIUM LEPRAE  22-49 PRS8_MICLU 30S RIBOSOMAL PROTEIN S8 MICROCOCCUS LUTEUS  103-130 PRS8_MYCCA 30S RIBOSOMAL PROTEIN S8 MYCOPLASMA CAPRICOLUM  41-78 PRSGA_ECOLI FERRITIN LIKE PROTEIN ESCHERICHIA COLI  80-107 PRT67_ECOLI RNA-DIRECTED DNA ESCHERICHIA COLI  225-268 POLYMERASE PSACB_BACAM LEVANSUCRASE PRECURSOR BACILLUS AMYLOLIQUEFACIENS  175-202  254-281 PSACB_BACSU LEVANSUCRASE PRECURSOR BACILLUS SUBTILIS  175-202  254-288 PSACB_STRMU LEVANSUCRASE PRECURSOR STREPTOCOCCUS MUTANS  31-65  155-189  314-369 PSACQ_BACLI SACQ REGULATORY FACTOR BACILLUS LICHENIFORMIS   2-46 PSACT_BACSU SACPA OPERON ANTI- BACILLUS SUBTILIS  102-129  189-216 TERMINATOR PSAGP_STRPY STREPTOCOCCAL ACID STREPTOCOCCUS PYOGENES  294-331  362-389 GLYCOPROTEIN PSAOX_BACSN SARCOSINE OXIDASE BACILLUS SP  350-377 PSAS2_CLOBI SPORE PROTEIN CLOSTRIDIUM BIFERMENTANS  17-47 PSASG_BACCE SPORE PROTEIN GAMMA- BACILLUS CEREUS  31-58 TYPE PSASG_BACST SPORE PROTEIN GAMMA- BACILLUS STEAROTHERMOPHILUS  37-64 TYPE PSBCC_ECOLI EXONUCLEASE SBCC ESCHERICHIA COLI  218-260  337-364  535-585  622-656  778-812  821-865  915-942 PSBCD_ECOLI EXONUCLEASE SBCD ESCHERICHIA COLI  137-164  334-397 PSBM_ECOLI SBM PROTEIN ESCHERICHIA COLI   5-32  436-470  553-580 PSBP_BACSU SBP PROTEIN BACILLUS SUBTILIS  28-55 PSCPA_STRPY C5A PEPTIDASE PRECURSOR STREPTOCOCCUS PYOGENES  126-160  784-811  831-880 PSCRB_KLEPN SUCROSE-6-PHOSPHATE KLEBSIELLA PNEUMONIAE  174-201 HYDROLASE PSCRB_LACLA SUCROSE-6-PHOSPHATE LACTOCOCCUS LACTIS  182-217  354-385  395-422 HYDROLASE PSCRB_STRMU SUCROSE-6-PHOSPHATE STREPTOCOCCUS MUTANS  335-362 HYDROLASE PSCRK_SALTH FRUCTOKINASE SALMONELLA THOMPSON  97-124 PSCRK_SALTY FRUCTOKINASE SALMONELLA TYPHIMURIUM  183-210 PSCRY_KLEPN SUCROSE PORIN PRECURSOR KLEBSIELLA PNEUMONIAE  61-88  240-267 PSCRY_SALTY SUCROSE PORIN PRECURSOR SALMONELLA TYPHIMURIUM  16-54  61-88  240-267 PSECA_BACSU PREPROTEIN TRANSLOCASE BACILLUS SUBTILIS  12-39  226-260 SECA SUBUNIT PSECA_ECOLI PREPROTEIN TRANSLOCASE ESCHERICHIA COLI  360-387  453-481 SECA SUBUNIT PSECB_ECOLI PROTEIN-EXPORT PROTEIN ESCHERICHIA COLI  41-68 SECB PSECD_ECOLI PROTEIN-EXPORT ESCHERICHIA COLI  46-73  378-412 MEMBRANE PROTEIN SECD PSECF_ECOLI PROTEIN-EXPORT ESCHERICHIA COLI  174-201 MEMBRANE PROTEIN SECF PSECY_ECOLI PREPROTEIN TRANSLOCASE ESCHERICHIA COLI  101-128 SECY SUBUNIT PSECY_LACLA PREPROTEIN TRANSLOCASE LACTOCOCCUS LACTIS  403-430 SECY SUBUNIT PSECY_METVA PREPROTEIN TRANSLOCASE METHANOCOCCUS VANNIELII  131-161  396-423 SECY SUBUNIT PSECY_STACA PREPROTEIN TRANSLOCASE STAPHYLOCOCCUS CARNOSUS  149-191 SECY SUBUNIT PSEFC_SALEN SEFC PROTEIN PRECURSOR SALMONELLA ENTERITIDIS  137-164  475-535 PSERA_BACSU D-3-PHOSPHOGLYCERATE BACILLUS SUBTILIS  16-43  347-374 DEHYDROGENASE PSFAA_ECOLI 5-FIMBRIAL PROTEIN ESCHERICHIA COLI  11-38 SUBUNIT PRECURSOR PSFSA_ECOLI SUGAR FERMENTATION ESCHERICHIA COLI  81-115 STIMULATION PROTEIN PSFUA_SERMA IRON-TRANSPORT SFUA SERRATIA MARCESCENS  34-61 PROTEIN PRECURSOR PSHU1_ECOLI SHUFFLON PROTEIN A ESCHERICHIA COLI  224-262 PSHU2_ECOLI SHUFFLON PROTEIN A′ ESCHERICHIA COLI  224-262 PSHU3_ECOLI SHUFFLON PROTEIN B ESCHERICHIA COLI  224-262 PSHU4_ECOLI SHUFFLON PROTEIN B′ ESCHERICHIA COLI  224-262 PSHU5_ECOLI SHUFFLON PROTEIN C ESCHERICHIA COLI  224-262  402-429 PSHU6_ECOLI SHUFFLON PROTEIN C′ ESCHERICHIA COLI  224-262 PSHU7_ECOLI SHUFFLON PROTEIN D′ ESCHERICHIA COLI  224-262 PSINR_BACLI SINR PROTEIN BACILLUS LICHENIFORMIS   9-36  43-80 PSINR_BACSU SINR PROTEIN BACILLUS SUBTILIS   9-36  43-70 PSLAP_ACEKI CELL SURFACE PROTEIN ACETOGENIUM KIVUI  237-264  282-309  313-453  458-489  517-544  563-593  641-685  726-753 PRECURSOR PSLPA_ECOLI PROPHAGE CP4-57 ESCHERICHIA COLI  93-136 INTEGRASE PSMF_ECOLI SMF PROTEIN ESCHERICHIA COLI  24-51 PSMPB_ECOLI SMALL PROTEIN B ESCHERICHIA COLI  27-61  90-117 PSMP_ECOLI SMP PROTEIN PRECURSOR ESCHERICHIA COLI  71-98 PSMTB_SYNP7 TRANSCRIPTIONAL SYNECHOCOCCUS SP  62-96 REPRESSOR 5MTB PSODF_COXBU SUPEROXIDE DISMUTASE COXIELLA BURNETII  116-143 PSODF_ECOLI SUPEROXIDE DISMUTASE ESCHERICHIA COLI  115-142 PSODF_METTH SUPEROXIDE DISMUTASE METHANOBACTERIUM  25-52 THERMOAUTOTROPHICU PSODF_PHOLE SUPEROXIDE DISMUTASE PHOTOBACTERIUM LEIOGNATHI  22-63 PSODM_PROFR SUPEROXIDE DISMUTASE PROPIONIBACTERIUM  164-191 FREUDENREICHII PSOHB_ECOLI SOHB PROTEIN PRECURSOR ESCHERICHIA COLI   7-48  70-97  273-300 PSOPB_ECOLI SOPB PROTEIN ESCHERICHIA COLI  252-279 PSOXR_ECOLI SOXR PROTEIN ESCHERICHIA COLI  16-63 PSP0J_BACSU STAGE 0 SPORULATION BACILLUS SUBTILIS  131-158 PROTEIN J PSP2A_BACME STAGE II SPORULATION BACILLUS MEGATERIUM  19-53 PROTEIN AA PSP2A_BACSU STAGE II SPORULATION BACILLUS SUBTILIS  21-55 PROTEIN AA PSP2B_BACLI STAGE II SPORULATION BACILLUS LICHENIFORMIS  42-69 PROTEIN AB PSP2B_BACME STAGE II SPORULATION BACILLUS MEGATERIUM  36-73 PROTEIN AB PSP2D_BACSU STAGE II SPORULATION BACILLUS SUBTILIS  134-161 PROTEIN D PSP2G_BACTK POSSIBLE ASPARTYL BACILLUS THURINGIENSIS   4-36  117-144 PROTEASE PSP2J_BACSU STAGE II SPORULATION BACILLUS SUBTILIS  14-44  463-500 PROTEIN J PSP3D_BACSU STAGE III SPORULATION BACILLUS SUBTILIS   9-36  52-86 PROTEIN D PSP3J_BACSU STAGE III SPORULATION BACILLUS SUBTILIS  44-75 PROTEIN J PRECURSOR PSP4A_BACSU STAGE IV SPORULATION BACILLUS SUBTILIS  139-180 PROTEIN A PSP4B_BACSU STAGE IV SPORULATION BACILLUS SUBTILIS  39-66 PROTEIN B PSP4G_BACSU STAGE IV SPORULATION BACILLUS SUBTILIS  251-278 PROTEIN FB PSP5A_BACSU STAGE V SPORULATION BACILLUS SUBTILIS   9-36 PROTEIN AF PSPAA_STRDO ANTIGEN I STREPTOCOCCUS DOWNEI  184-218 PSPAB_BACSU SUBTILIN BIOSYNTHESIS BACILLUS SUBTILIS  181-208 117 KD PROTEIN PSPAC_BACSU SUBTILIN BIOSYNTHESIS BACILLUS SUBTILIS  311-338 PROTEIN SPAC PSPAK_BACSU SENSOR PROTEIN SPAK BACILLUS SUBTILIS  80-107  224-251  290-324 PSPAP_STRMU CELL SURFACE ANTIGEN I/ STREPTOCOCCUS MUTANS  122-276  281-465  538-565  576-630 1071-1098 1155-1182 1377-1430 II PRECURSOR PSPAR_BACSU REGULATORY PROTEIN BACILLUS SUBTILIS   4-31  172-199 PSPAT_BACSU SUBTILIN TRANSPORT BACILLUS SUBTILIS  55-82  226-267 PROTEIN SPAT PSPEC_STRPY EXOTOXIN TYPE C STREPTOCOCCUS PYOGENES  12-39 PRECURSOR PSPIR_SPICI SPIRALIN SPIROPLASMA CITRI  82-109  155-182 PSPIR_SPIME SPIRALIN SPIROPLASMA MELLIFERUM  195-222 PSPOT_ECOLI GUAN-3′,5′-BIS(DIPHOS) 3′- ESCHERICHIA COLI  637-664 PYROPHOSPHOHYDROLA PSPPA_ECOLI PROTEASE IV ESCHERICHIA COLI  278-305 PSQHC_ZYMMO SQUALENE-HOPENE CYCLASE ZYMOMONAS MOBILIS  590-617 PSRFA_BACSU SURFACTIN SYNTHETASE BACILLUS SUBTILIS  159-186  244-271 SUBUNIT A PSRP5_ECOLI SIGNAL RECOGNITION ESCHERICHIA COLI  301-328 PARTICLE PROTEIN PSRP5_MYCMY SIGNAL RECOGNITION MYCOPLASMA MYCOIDES  21-65  107-141  394-428 PARTICLE PROTEIN PSSA1_PASHA SEROTYPE-SPECIFIC ANTIGEN PASTEURELLA HAEMOLYTICA  151-178  358-385  465-518  529-570  860-904 1 PRECURSOR PSSAB_STRPA ADHESION B PRECURSOR STREPTOCOCCUS PARASANGUIS  32-59 PSSAB_STRSA ADHESION B PRECURSOR STREPTOCOCCUS SANGUIS  21-59  101-128 PSSB_ECOLI SINGLE-STRAND BINDING ESCHERICHIA COLI  68-95 PROTEIN PSSB_PROMI SINGLE-STRAND BINDING PROTEUS MIRABILIS  63-104 PROTEIN PSSB_SERMA SINGLE-STRAND BINDING SERRATIA MERCESCENS  63-104 PROTEIN PSSP5_STRSA AGGLUTININ RECEPTOR STREPTOCOCCUS SANGUIS  131-173  178-287  295-483  565-592  676-710 1081-1131 PRECURSOR PSTAV_STRAV STREPTAVIDIN PRECURSOR STREPTOMYCES AVIDINII  125-152 PSTA_ECOLI STREPTOTHRICIN ACETYL- ESCHERICHIA COLI  66-91 TRANSFERASE PSTC1_STAAU STAPHYLOCOAGULASE STAPHYLOCOCCUS AUREUS  90-119  172-199  280-311 PRECURSOR PSTC2_STAAU STAPHYLOCOAGULASE STAPHYLOCOCCUS AUREUS  90-117  264-291 PRECURSOR PSTC_CLOBE L-TRANSD TRANSC CONTROL CLOSTRIDIUM BEIJERINCKII  47-74 PROTEIN PSTPA_ECOLI STPA PROTEIN ESCHERICHIA COLI  36-63 PSTR1_STRGR INOSAMINE-PHOSPHATE STREPTOMYCES GRISEUS  183-210 AMIDINOTRANSFERASE 1 PSTRP_STREQ STREPTOKINASE C STREPTOCOCCUS EQUISIMILIS  209-236  281-308 PRECURSOR PSTRP_STRPY STREPTOKINASE A STREPTOCOCCUS PYOGENES  209-236 PRECURSOR PSTRP_STRSP STREPTOKINASE G STREPTOCOCCUS SP  209-236  281-308 PRECURSOR PSUBE_BACSU MINOR EXTRACELLULAR BACILLUS SUBTILIS  435-462  522-563  605-639 PROTEASE EPR PREC PSUBF_BACSU BACILLOPEPTIDASE F BACILLUS SUBTILIS  40-67  89-116  121-148  554-597 PRECURSOR PSUBI_SALTY SULFATE-BINDING PROTEIN SALMONELLA TYPHIMURIUM  37-74 PSUBI_SYNP7 SULFATE-BINDING PROTEIN SYNECHOCOCCUS SP  63-94 PRECURSOR PSUBI_SYNY3 SULFATE-BINDING PROTEIN SYNECHOCYSTIS SP  64-91 PRECURSOR PSUBT_BACLI SUBTILISIN CARLSBERG BACILLUS LICHENIFORMIS  191-222 PRECURSOR PSUBT_BACMS SUBTILISIN BACILLUS MESENTERICUS  91-118 PSUBT_BACS9 SUBTILISIN PRECURSOR BACILLUS SP  36-63  250-277 PSUBT_BACSA SUBTILISIN AMYLO- BACILLUS SUBTILIS  197-224 SACCHARITICUS PRECURSOR PSUBT_BACSD SUBTILISIN BACILLUS SUBTILIS  86-117 PSUBT_BACST SUBTILISIN J PRECURSOR BACILLUS STEAROTHERMOPHILUS  197-224 PSUBT_BACSU SUBTILISIN E PRECURSOR BACILLUS SUBTILIS  197-224 PSUBV_BACSU MINOR EXTRACELLULAR BACILLUS SUBTILIS  55-108  613-654  741-768 PROTEASE VPR PRECUR PSUCC_ECOLI SUCCINYL-COA SYNTHETASE ESCHERICHIA COLI  62-89 SYNTHETASE BETA PSUCP_AGRVI SUCROSE PHOSPHORYLASE AGROBACTERIUM VITIS  449-476 PSULA_ENTAE CELL DIVISION INHIBITOR ENTEROBACTER AEROGENES  112-139 PSYA_ECOLI ALANYL-TRNA SYNTHETASE ESCHERICHIA COLI  257-287  725-752  790-821 PSYD_ECOLI ASPARTYL-TRNA ESCHERICHIA COLI  330-357 SYNTHETASE PSYE_BACST GLUTAMYL-TRNA BACILLUS STEAROTHERMOPHILUS  49-76 SYNTHETASE PSYE_BACSU GLUTAMYL-TRNA BACILLUS SUBTILIS  49-76  351-386 SYNTHETASE PSYE_THETH GLUTAMYL-TRNA THERMUS AQUATICUS  405-432 SYNTHETASE PSYFA_BACSU PHENYLALANYL-TRNA BACILLUS SUBTILIS   7-34 SYNTHETASE A CHAIN PSYFB_BACSU PHENYLALANYL-TRNA BACILLUS SUBTILIS  340-367  407-441 SYNTHETASE BETA CHAIN PSYFB_ECOLI PHENYLALANYL-TRNA ESCHERICHIA COLI  546-573  607-634  744-771 SYNTHETASE BETA CHAIN PSYGB_ECOLI GLYCYL-TRNA SYNTHETASE ESCHERICHIA COLI  354-381  487-514 BETA CHAIN PSYH_STREQ HISTIDYL-TRNA SYNTHETASE STREPTOCOCCUS EQUISIMILIS  376-403 PSYI_METTH ISOLEUCYL-TRNA METHANOBACTERIUM 1010-1037 SYNTHETASE THERMOAUTOTROPHICU PSYK1_ECOLI LYSYL-TRNA SYNTHETASE ESCHERICHIA COLI  283-310 PSYK2_ECOLI LYSYL-TRNA SYNTHETASE, ESCHERICHIA COLI  45-72  283-310 HEAT INDUCIBLE PSYL_ECOLI LEUCYL-TRNA SYNTHETASE ESCHERICHIA COLI  220-247 PSYM_BACST METHIONYL-TRNA BACILLUS STEAROTHERMOPHILUS  69-99 SYNTHETASE PSYM_ECOLI METHIONYL-TRNA ESCHERICHIA COLI  87-124 SYNTHETASE PSYP_ECOLI PROLYL-TRNA SYNTHETASE ESCHERICHIA COLI  541-568 PSYQ_ECOLI GLUTAMINYL-TRNA ESCHERICHIA COLI  394-421 SYNTHETASE PSYRD_PSESY SYRD PROTEIN PSEUDOMONAS SYRINGAE  449-483 PSYR_ECOLI ARGINYL-TRNA SYNTHETASE ESCHERICHIA COLI  540-574 PSYT1_BACSU THREONYL-TRNA BACILLUS SUBTILIS  401-428  605-639 SYNTHETASE PSYV_BACST VALYL-TRNA SYNTHETASE BACILLUS STEAROTHERMOPHILUS  603-630  809-843 PSYV_ECOLI VALYL-TRNA SYNTHETASE ESCHERICHIA COLI  300-327  882-912  924-951 PSYW_BACST TRYPTOPHANYL-TRNA BACILLUS STEAROTHERMOPHILUS  204-231  239-266 SYNTHETASE PSYY1_BACSU TYROSYL-TRNA SYNTHETASE BACILLUS SUBTILIS  81-115  375-409 1 PSYY2_BACSU TYROSYL-TRNA SYNTHETASE BACILLUS SUBTILIS  69-96 2 PSYY_BACCA TYROSYL-TRNA SYNTHETASE BACILLUS CALDOTENAX  295-322  372-416 PSYY_BACST TYROSYL-TRNA SYNTHETASE BACILLUS STEAROTHERMOPHILUS  295-322  372-416 PT1M1_ECOLI ENZYME ECOR124/3 1 M ESCHERICHIA COLI  126-167  405-432  485-512 PROTEIN PT1R1_ECOLI ENZYME ECOR124/3 R ESCHERICHIA COLI  30-57  624-651  702-736  768-795  843-870  966-1000 PROTEIN PT1R_ECOLI ENZYME ECOK 1 R PROTEIN ESCHERICHIA COLI  158-263 PT1S1_ECOLI ENZYME ECOR124/3 I ESCHERICHIA COLI  154-181 SPECIFICITY PROTEIN PT1SA_ECOLI ENZYME ECOA I SPECIFICITY ESCHERICHIA COLI  279-306 PROTEIN PT1SB_ECOLI ENZYME ECOB I SPECIFICITY ESCHERICHIA COLI  278-312 PROTEIN PT1SD_ECOLI ENZYME ECOD I SPECIFICITY ESCHERICHIA COLI  249-283 PROTEIN PT1SE_ECOLI ENZYME ECOE I SPECIFICITY ESCHERICHIA COLI  279-306 PROTEIN PT1S_SALPO ENZYME SPECIFICITY SALMONELLA POTSDAM  396-423 PROTEIN PT1S_SALTY ENZYME SPECIFICITY SALMONELLA TYPHIMURIUM  194-221  276-304  402-429 PROTEIN PT257_ECOLI TYPE IIS RESTRICTION ESCHERICHIA COLI  138-196  265-295  406-440  639-682  687-728  926-954 ENZYME ECO571 PT2A1_ACICA TYPE II RESTRICTION ACINETOBACTER CALCOACETICUS  49-76 ENZYME ACCI PT2BF_BACSU TYPE II RESTRICTION BACILLUS SUBTILIS   3-43  135-223  236-280 ENZYME BSUFI PT2BR_BACSU TYPE II RESTRICTION BACILLUS SUBTILIS   3-45  338-384  401-430  532-559 ENZYME BSURI PT2C1_CITFR TYPE II RESTRICTION CITROBACTER FREUNDII  35-62 ENZYME CFRBI PT2C1_HERAU TYPE II RESTRICTION HERPETOSIPHON AURANTIACUS  176-215 ENZYME HGICI PT2C2_HERAU TYPE II RESTRICTION HERPETOSIPHON AURANTIACUS  243-273 ENZYME HGICII PT2D1_DESDN TYPE II RESTRICTION DESULFOVIBRIO DESULFURICANS  85-122 ENZYME DDEI PT2D1_STRPN TYPE II RESTRICTION STREPTOCOCCUS PNEUMONIAE  213-240 ENZYME DPNI PT2E1_ECOLI TYPE II RESTRICTION ESCHERICHIA COLI   2-29 ENZYME ECORI PT2E2_ECOLI TYPE II RESTRICTION ESCHERICHIA COLI  333-360 ENZYME ECORII PT2E5_ECOLI TYPE II RESTRICTION ESCHERICHIA COLI  128-155  214-241 ENZYME ECORV PT2F1_FLAOK TYPE IIS RESTRICTION FLAVOBACTERIUM OKEANOKOITES  302-336 ENZYME FOKI PT2H1_HAEIN TYPE II RESTRICTION HAEMOPHILUS INFLUENZAE   6-38  69-96 ENZYME HINFI PT2H1_HAEPA TYPE II RESTRICTION HAEMOPHILUS PARAINFLUENZAE  77-125 ENZYME HPAI PT2H2_HAEHA TYPE II RESTRICTION HAEMOPHILUS HAEMOLYTICUS  23-50 ENZYME HHAII PT2H2_HAEIN TYPE II RESTRICTION HAEMOPHILUS INFLUENZAE  97-138 ENZYME HINCII PT2K1_KLEPN TYPE II RESTRICTION KLEBSIELLA PENUMONIAE  18-45  178-205 ENZYME KPNI PT2M1_MORBO TYPE II RESTRICTION MORAXELLA BOVIS  15-61  187-215  225-252 ENZYME MBOI PT2M2_MORBO TYPE IIS RESTRICTION MORAXELLA BOVIS   3-30  158-185  337-364 ENZYME MOBOII PT2MZ_METTF POSSIBLE TYPE II METHANOBACTERIUM  105-151 RESTRICTION ENZYME MTHZI THERMOFORMICICUM PT2NG_NEIGO TYPE II RESTRICTION NEISSERIA GONORRHOEAE  117-144  231-258 ENZYME NGOPII PT2S1_STRSA TYPE II RESTRICTION STREPTOCOCCUS SANGUIS   5-32  41-68  395-446 ENZYME STSI PT2S2_SHISO TYPE II RESTRICTION SHIGELLA SONNEI  206-243  258-288 ENZYME SSOII PT2S3_STAAU TYPE II RESTRICTION STAPHYLOCOCCUS AUREUS  70-102 ENZYME SAU3A1 PT2SI_SALIN TYPE II RESTRICTION SALMONELLA INFANTIS  144-181 ENZYME SINI PT2SM_SERMA TYPE II RESTRICTION SERRATIA MARCESCENS  61-88 ENZYME SMAI PT2TA_THEAQ TYPE II RESTRICTION THERMUS AQUATICUS  147-181  203-237 ENZYME TAQI PT3MO_ECOLI SYSTEM ECOP15 ENZYME ESCHERICHIA COLI  37-71  75-102  236-296  378-405 MOD PT3RE_BACCE SYSTEM ENZYME RES BACILLUS CEREUS  62-89  256-283 PTA47_TREPA 47 KD MEMBRANE ANTIGEN TREPONEMA PALLIDUM  26-53 PRECURSOR PTA53_TREDE 53 KD MEMBRANE ANTIGEN TREPONEMA DENTICOLA  99-126  298-329 A PRECUSOR PTACY_BACAL ALVEOLYSIN PRECURSOR BACILLUS ALVEI  272-302  374-401 PTACY_CLOPE PERFRINGOLYSIN O CLOSTRIDIUM PERFRINGENS  270-311  372-434 PRECURSOR PTACY_LISIV IVANOLYSIN PRECURSOR LISTERIA IVANOVII  93-120  167-195  396-423 PTACY_LISMO LISTERIOLYSIN O LISTERIA MONOCYTOGENES  98-125  168-196  295-329  397-424 PRECURSOR PTACY_LISSE SEELIGERIOLYSIN LISTERIA SEELIGERI  99-126  296-323  349-376  398-463 PRECURSOR PTACY_STRPN PNEUMOLYSIN STREPTOCOCCUS PNEUMONIAE  234-272 PTACY_STRPY STREPTOLYSIN O STREPTOCOCCUS PYOGENES  86-133  355-382  440-470 PRECURSOR PTAGB_BACSU TECHOIC ACID BIOSYN BACILLUS SUBTILIS  42-69 PROTEIN B PREC PTACG_BACSU TECHOIC ACID BIO- BACILLUS SUBTILIS  348-375 SYNTHESIS PROTEIN C PTAGE_BACSU TECHOIC ACID BIO- BACILLUS SUBTILIS  59-93  144-181  185-243  565-592  600-627 SYNTHESIS PROTEIN E PTAGF_BACSU TECHOIC ACID BIO- BACILLUS SUBTILIS  182-209 SYNTHESIS PROTEIN F PTBP1_NEIGO TRANSFERRIN-BINDING NEISSERIA GONORRHOEAE  39-73  137-164  398-425  810-841 PROTEIN 1 PRECURSOR PTBUD_PSEPI PHENOL 2-MONOOXYGENASE PSEUDOMONAS PICKETTII  38-65  227-254  375-402 PTCDT_SALTY TRANSCRIPTIONAL SALMONELLA TYPHIMURIUM  105-132 REGULATORY PROTEIN TCDT PTCPC_VIBCH MEMBRANE PROTEIN TCPC VIBRIO CHOLERAE  20-47  83-128  199-233  263-290  344-375  459-486 PTCPE_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE  24-59  77-111 PROTEIN TCPE PTCPF_VIBCH TCP PILUS SECRETION VIBRIO CHOLERAE  32-66  211-238 PROTEIN TCPF PTCPH_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE  95-122 PROTEIN TCPH PTCPI_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE  25-52  234-261  279-306  346-379 PROTEIN TCPI PTCPN_VIBCH TCP PILUS VIRULENCE VIBRIO CHOLERAE  48-75 REGULATORY PROTEIN PTCPO_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE  230-257 PROTEIN TCPO PTCPY_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE  121-148 PROTEIN TCPY PTCPZ_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE  44-85 PROTEIN TCPZ PTCR2_BACSU TETRACYCLINE RESISTANCE BACILLUS SUBTILIS  404-434 PROTEIN PTCR_BACST TETRACYCLINE RESISTANCE BACILLUS STEAROTHERMOPHILUS  422-453 PROTEIN PTCR_STAAU TETRACYCLINE RESISTANCE STAPHYLOCOCCUS AUREUS  404-431 PROTEIN PTCR_STRAG TETRACYCLINE RESISTANCE STREPTOCOCCUS AGALACTIAE  422-453 PROTEIN PTCR_STRPN TETRACYCLINE RESISTANCE STREPTOCOCCUS PNEUMONIAE  422-453 PROTEIN PTDCA_ECOLI TDCABC OPERON TRANS- ESCHERICHIA COLI  210-239 CRIPTIONAL ACTIVATOR PTDCC_ECOLI TDCC PROTEIN ESCHERICHIA COLI  334-361 PTEE6_STRPY TRYPSIN-RESIST SURFACE STREPTOCOCCUS PYOGENES  137-164  361-395  400-437 T6 PROTEIN PREC PTER2_ECOLI TETRACYCLINE REPRESSOR ESCHERICHIA COLI   8-36 PROTEIN CLASS B PTER4_ECOLI TETRACYCLINE REPRESSOR ESCHERICHIA COLI  183-210 PROTEIN CLASS D PTERA_ALCSP TELLURIUM RESISTANCE ALCALIGENES SP  48-86 PROTEIN TERA PTESB_ECOLI ACYL-COA THIOESTERASE II ESCHERICHIA COLI   4-31 PTET5_ENTFA TETRACYCLINE RESISTANCE ENTEROCOCCUS FAECALIS   2-36  130-159  179-206  217-244 PROTEIN TETM PTET9_ENTFA TETRACYCLINE RESISTANCE ENTEROCOCCUS FAECALIS   2-36  130-159  217-244  260-287 PROTEIN TETM PTETC_ECOLI TRANSPOSON TN10 TETC ESCHERICHIA COLI  72-106  116-158 PROTEIN PTETM_STRLI TETRACYCLINE RESISTANCE STREPTOMYCES LIVIDANS  82-109 PROTEIN PTETM_UREUR TETRACYCLINE RESISTANCE UREAPLASMA UREALYTICUM   2-36  130-159  217-244  260-287 PROTEIN TETM PTETO_CAMCO TETRACYCLINE RESISTANCE CAMPYLOBACTER COLI   2-29 PROTEIN TETO PTETO_CAMJE TETRACYCLINE RESISTANCE CAMPYLOBACTER JEJUNI   2-36 PROTEIN TETO PTETO_STRMU TETRACYCLINE RESISTANCE STREPTOCOCCUS MUTANS   2-29 PROTEIN TETO PTETX_BACFR TETRACYCLINE RESISTANCE BACTEROIDES FRAGILIS  25-62 PROTEIN PTETX_CLOTE TETANUS TOXIN PRECURSOR CLOSTRIDIUM TETANI  274-304  540-567  615-642  692-719  985-1012 1240-1277 PTF2B_PYRWO TRANS INITIATION FACTOR PYROCOCCUS WOESEI  218-258 HB HOMOLOG PTFDC_ALCEU CHLOROCATECHOL 1,2- ALCALIGENES EUTROPHUS   2-33 DIOXYGENASE PTGT_ECOLI QUEUINE TRNA-RIBOSYL- ESCHERICHIA COLI  173-200 TRANSFERASE PTHD1_LACLA THREONINE DEHYDRATASE LACTOCOCCUS LACTIS  267-303 BIOSYNTHETIC PTHD2_ECOLI THREONINE DEHYDRATASE ESCHERICHIA COLI  293-320 CATABOLIC PTHDF_BACSU FURAN OXIDATION PROTEIN BACILLUS SUBTILIS  153-180  192-226  282-316  391-418 THDF PTHDF_ECOLI FURAN OXIDATION PROTEIN ESCHERICHIA COLI  226-260  404-431 THDF PTHDF_PSEPU FURAN OXIDATION PROTEIN PSEUDOMONAS PUTIDA  226-260 THDF PTHER_BACCE THERMOLYSIN BACILLUS CEREUS   4-38  240-267 PTHER_BACST THERMOLYSIN PRECURSOR BACILLUS STEAROTHERMOPHILUS  45-72 PTHER_BACTH THERMOLYSIN BACILLUS THERMO-  86-113 PROTEOLYTICUS PTHET_THEVU THERMITASE THERMOACTINOMYCES VULGARIS  131-161 PTHIC_ECOLI THIC PROTEIN ESCHERICHIA COLI  232-263  301-328 PTHIG_ECOLI THIG PROTEIN ESCHERICHIA COLI  138-165 PTHPS_SULAC THERMOPSIN PRECURSOR SULFOLOBUS ACIDOCALDARIUS  135-172  199-233 PTHRC_BRELA THREONINE SYNTHASE BREVIBACTERIUM  288-315 LACTOFERMENTUM PTHTR_SACER PUTATIVE THIOSULFATE SACCHAROPOLYSPORA ERYTHRAEA  69-96 SULFURTRANSFERASE PTIG_ECOLI TRIGGER FACTOR ESCHERICHIA COLI  144-171 PTMPA_TREPA TREPONEMAL MEMBRANE TREPONEMA PALLIDUM  236-266 PROTEIN A PRECURSOR PTMPB_TREPA TREPONEMAL MEMBRANE TREPONEMA PALLIDUM  44-71 PROTEIN B PRECURSOR PTMPB_TREPH TREPONEMAL MEMBRANE TREPONEMA PHAGEDENIS  41-68 PROTEIN B PRECURSOR PTNAB_ECOLI LOW AFFINITY TRYPTOPHAN ESCHERICHIA COLI  74-108 PERMEASE PTNP4_STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS  52-79  322-349 PTNP7_ENTFA TRANSPOSON TN917 ENTEROCOCCUS FAECALIS  59-97  111-138 RESOLVASE PTNPA_STAAU TRANSPOSASE A STAPHYLOCOCCUS AUREUS  151-178 PTNPB_STAAU TRANSPOSASE B STAPHYLOCOCCUS AUREUS  589-625 PTNPI_BACTU TNP I RESOLVASE BACILLUS THURINGIENSIS   7-62  65-92  174-201 PTNSB_ECOLI TRANSPOSON TN7 TRANS- ESCHERICHIA COLI  99-126  510-537 POSITION PROTEIN TNSB PTNSC_ECOLI TRANSPOSON TN7 TRANS- ESCHERICHIA COLI  32-59  314-341 POSITION PROTEIN TNSC PTNSD_ECOLI TRANSPOSON TN7 TRANS- ESCHERICHIA COLI  339-366 POSITION PROTEIN TNSD PTNSE_ECOLI TRANSPOSON TN7 TRANS- ESCHERICHIA COLI  463-490 POSITION PROTEIN TNSE PTOD1_PSEPU TOLUENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA  36-63 ALPHA SUBUNIT PTOD2_PSEPU TOLUENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA  119-153 BETA SUBUNIT PTODA_PSEPU TOLUENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA  179-213 SYSTEM PTODJ_PSEPU TODF PRODUCT HYDRATASE PSEUDOMONAS PUTIDA  143-170 PTOLA_ECOLI TOLA PROTEIN ESCHERICHIA COLI  101-138 PTOLC_ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA COLI  144-178  184-211  239-266  348-375  383-443 TOLC PRECURSOR PTOP1_SYNP7 DNA TOPOISOMERASE I SYNECHOCOCCUS SP  203-230 PTORA_ECOLI TRIMETHYLAMINE-N-OXIDE ESCHERICHIA COLI  797-824 REDUCTASE PTOX1_BORPE PERTUSSIS TOXIN SUBUNIT BORDETELLA PERTUSSIS  179-206 1 (S1) PRECURSOR PTOX2_BORPE PERTUSSIS TOXIN SUBUNIT BORDETELLA PERTUSSIS  58-85 2 (S2) PRECURSOR PTOXA_CLODI TOXIN A CLOSTRIDIUM DIFFICILE  20-88  99-159  204-231  342-369  373-414  847-962  966-994  997-1024 1348-1402 PTOXA_PSEAE EXOTOXIN A PRECURSOR PSEUDOMONAS AERUGINOSA  470-497 PTOXB_CLODI TOXIN B CLOSTRIDIUM DIFFICILE  38-72  133-163  199-241  825-869  923-950 1334-1388 1403-1433 1506-1565 1716-1747 PTOXS_VIBCH TRANSMEMBRANE VIBRIO CHOLERAE  13-40 REGULATORY PROTEIN TOXS PTPF1_TREPA ANTIGEN TPF 1 TREPONEMA PALLIDUM  106-143 PTPIS_ECOLI TRIOSEPHOSPHATE ESCHERICHIA COLI  83-110 ISOMERASE PTPIS_MORSP TRIOSEPHOSPHATE MORAXELLA SP  139-166 ISOMERASE PTPR_PORGI THIOL PROTEASE PORPHYROMONAS GINGIVALIS  117-144 PRECURSOR PTR2M_AGRT3 TRYPTOPHAN 2-MONO- AGROBACTERIUM TUMEFACIENS  239-266  501-529 OXYGENASE PTR2M_AGRT4 TRYPTOPHAN 2-MONO- AGROBACTERIUM TUMEFACIENS  239-266  502-529 OXYGENASE PTR2M_PSESS TRYPTOPHAN 2-MONO- PSEUDOMONAS SYRINGAE  41-68 OXYGENASE PTRA1_STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS  58-113 PTRA2_STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS  11-38  58-113 PTRA3_ECOLI TRANSPOSASE ESCHERICHIA COLI  721-755 PTRA3_RHIME TRANSPOSASE RHIZOBIUM MELILOTI  179-206 PTRA3_STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS  33-60  68-95 PTRA4_ECOLI TRANSPOSASE ESCHERICHIA COLI  181-208  308-340  720-754 PTRA6_ECOLI TRANSPOSASE ESCHERICHIA COLI  51-78 PTRA6_SHISO TRANSPOSASE SHIGELLA SONNEI  51-78  200-227  231-258 PTRA7_ECOLI TRANSPOSASE ESCHERICHIA COLI  729-756 PTRA9_MYCTU PUTATIVE TRANSPOSASE MYCOBACTERIUM TUBERCULOSIS  159-186 PTRAB_BACTB IS231B PROBABLE BACILLUS THURINGINESIS  281-308  419-446 TRANSPOSASE PTRAC_BACTB IS231C PROBABLE BACILLUS THIRINGIENSIS  281-308  419-446 TRANSPOSASE PTRAC_STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS   4-31  45-72 PTRAX_BACTB IS231 PROBABLE BACILLUS THURINGIENSIS  281-308  419-446 TRANSPOSASE PTRA_BACTU TRANSPOSASE BACILLUS THURINGIENSIS  93-127  509-539 PTRA_PSEAE TRANSPOSASE PSEUDOMONAS AERUGINOSA  127-154  721-755 PTRB1_ECOLI TRAB PROTEIN ESCHERICHIA COLI  113-143 PTRBF_ECOLI TRBF PROTEIN ESCHERICHIA COLI  12-39 PTRB1_ECOLI TRB1 PROTEIN ESCHERICHIA COLI  70-97 PTRC1_ECOLI TRAC-1 PROTEIN ESCHERICHIA COLI 1006-1058 PTRC2_ECOLI TRAC-2 PROTEIN ESCHERICHIA COLI 1102-1149 PTRC3_ECOLI TRAC-3 PROTEIN ESCHERICHIA COLI  884-931 PTRD1_ECOLI TRAD PROTEIN ESCHERICHIA COLI  297-348 PTREA_ECOLI PERIPLASMIC TREHALASE ESCHERICHIA COLI  362-403  477-508 PRECURSOR PTREC_ECOLI AMYLOTREHALASE ESCHERICHIA COLI  280-307 PTRFA_ECOLI TRFA TRANSCRIPTIONAL ESCHERICHIA COLI   5-32  105-132 REPRESSOR PROTEIN PTRG1_ECOLI TRAG PROTEIN ESCHERICHIA COLI  61-88  630-657  831-858  865-895 PTRG5_ECOLI TRAG PROTEIN ESCHERICHIA COLI  196-223 PTRG6_ECOLI TRAG PROTEIN ESCHERICHIA COLI  195-222  518-545 PTRI1_ECOLI TRAI PROTEIN ESCHERICHIA COLI  155-209  597-624  887-914 1350-1377 PTRI2_ECOLI TRAI PROTEIN ESCHERICHIA COLI  155-209  597-624  887-914 1350-1377 PTRI5_ECOLI TRAI PROTEIN ESCHERICHIA COLI  47-74  328-371 PTRJ4_ECOLI TRAJ PROTEIN ESCHERICHIA COLI  36-63 PTRM8_ECOLI TRAM PROTEIN ESCHERICHIA COLI   5-32 PTRMA_ECOLI TRNA (URACIL-5-)-METHYL- ESCHERICHIA COLI  107-137 TRANSFERASE PTRMD_ECOLI TRNA (GUANINE-N1)- ESCHERICHIA COLI  115-142  226-253 METHYLTRANSFERASE PTRPA_BACSU TRYPTOPHAN SYNTHASE BACILLUS SUBTILIS  220-247 ALPHA CHAIN PTRPA_CAUCR TRYPTOPHAN SYNTHASE CAULOBACTER CRESCENTUS  241-275 ALPHA CHAIN PTRPA_PSEAE TRYPTOPHAN SYNTHASE PSEUDOMONAS AERUGINOSA  176-203 ALPHA CHAIN PTRPB_ACICA TRYPTOPHAN SYNTHASE ACINETOBACTER CALCOACETICUS  79-113 BETA CHAIN PTRPB_BACSU TRYPTOPHAN SYNTHASE BACILLUS SUBTILIS  76-103  318-345 BETA CHAIN PTRPB_BRELA TRYPTOPHAN SYNTHASE BREVIBACTERIUM  172-199 BETA CHAIN LACTOFERMENTUM PTRPB_LACCA TRYPTOPHAN SYNTHASE LACTOBACILLUS CASEI  83-117 BETA CHAIN PTRPB_LACLA TRYPTOPHAN SYNTHASE LACTOBACILLUS LACTIS  77-104  164-191 BETA CHAIN PTRPB_VIBPA TRYPTOPHAN SYNTHASE VIBRIO PARAHAEMOLYTICUS  56-83 BETA CHAIN PTRPC_BRELA INDOLE-3-GLYCEROL BREVIBACTERIUM  229-256 PHOSPHATE SYNTHASE LACTOFERMENTUM PTRPC_ECOLI INDOLE-3-GLYCEROL ESCHERICHIA COLI  205-232 PHOSPHATE SYNTHASE PTRPC_LACLA INDOLE-3-GLYCEROL LACTOCOCCUS LACTIS  148-175 PHOSPHATE SYNTHASE PTRPC_VIBPA INDOLE-3-GLYCEROL VIBRIO PARAHAEMOLYTICUS  346-376 PHOSPHATE SYNTHASE PTRPD_ACICA ANTHRANILATE PHOSPHOR- ACINETOBACTER CALCOACETICUS  223-250  260-294 IBOSYLTRANSFERASE PTRPD_PSEAE ANTHRANILATE PHOSPHOR- PSEUDOMONAS AERUGINOSA  205-232 IBOSYLTRANSFERASE PTRPD_PSEPU ANTHRANILATE PHOSPHOR- PSEUDOMONAS PUTIDA  205-232 IBOSYLTRANSFERASE PTRPD_VIBPA ANTHRANILATE PHOSPHOR- VIBRIO PARAHAEMOLYTICUS   2-29 IBOSYLTRANSFERASE PTRPE_BACPU ANTHRANILATE SYNTHASE BACILLUS PUMILUS  33-60 COMPONENT I PTRPE_CLOTM ANTHRANILATE SYNTHASE CLOSTRIDIUM THERMOCELLUM  165-226 COMPONENT I PTRPE_LACLA ANTHRANILATE SYNTHASE LACTOCOCCUS LACTIS  142-191 COMPONENT I PTRPE_LEPBI ANTHRANILATE SYNTHASE LEPTOSPIRA BIFLEXA  145-179 COMPONENT I PTRPE_RHIME ANTHRANILATE SYNTHASE RHIZOBIUM MELILOTI  139-166 PTRPE_SALTY ANTHRANILATE SYNTHASE SALMONELLA TYPHIMURIUM  191-218 COMPONENT I PTRPE_SULSO ANTHRANILATE SYNTHASE SULFOLOBUS SOLFATARICUS  143-183  298-328 COMPONENT I PTRPE_VIBPA ANTHRANILATE SYNTHASE VIBRIO PARAHAEMOLYTICUS   9-36  54-81 COMPONENT I PTRPG_ACICA ANTHRANILATE SYNTHASE ACINETOBACTER CALCOACETICUS  12-39 COMPONENT II PTRPG_AZOBR ANTHRANILATE SYNTHASE AZOSPIRILLUM BRASILENSE   4-31 COMPONENT II PTRPG_ECOLI ANTHRANILATE SYNTHASE ESCHERICHIA COLI   5-32 COMPONENT II PTRPG_LACLA ANTHRANILATE SYNTHASE LACTOCOCCUS LACTIS   4-31 COMPONENT II PTRPG_PSEAE ANTHRANILATE SYNTHASE PSEUDOMONAS AERUGINOSA  12-39 COMPONENT II PTRPG_SALTY ANTHRANILATE SYNTHASE SALMONELLA TYPHIMURIUM   5-32 COMPONENT II PTRPG_SERMA ANTHRANILATE SYNTHASE SERRATIA MARCESCENS   9-43 COMPONENT II PTRPG_SHIDY ANTHRANILATE SYNTHASE SHIGELLA DYSENTERIAE   5-32 COMPONENT II PTRPO_PSEAE PUTATIVE TRANSCRIPTIONAL PSEUDOMONAS AERUGINOSA  147-174 REGULATOR PTRS2_ECOLI TRANS PROTEIN ESCHERICHIA COLI  85-119 PTRT3_ECOLI RESISTANCE PROTEIN ESCHERICHIA COLI  184-221 PRECURSOR PTRY1_SALTY TRAY PROTEIN SALMONELLA TYPHIMURIUM  30-57 PTRYP_STRGR TRYPSIN PRECURSOR STREPTOMYCES GRISEUS  80-107 PTSR_STRAZ RRNA METHYLTRANSFERASE STREPTOMYCES AZUREUS  126-153 PTSST_STAAU TOXIC SHOCK SYNDROME STAPHYLOCOCCUS AUREUS  29-63  102-129 TOXIN-1 PRECURSOR PTSX_ECOLI CHANNEL-FORMING PROTEIN ESCHERICHIA COLI  225-252 TSX PRECURSOR PTTK_ECOLI HYPOTHETICAL 24.3 KD ESCHERICHIA COLI  81-115 PROTEIN PTUS_ECOLI SITE-BINDING PROTEIN ESCHERICHIA COLI  57-91  107-134 PTYCA_BACBR TRYOCIDINE SYNTHETASE I BACILLUS BREVIS  117-147  534-561 1019-1051 PTYF1_TREPE ANTIGEN TYF1 TREPONEMA PERTENUE  106-143 PTYRA_BACSU POSSIBLE PREPHENATE BACILLUS SUBTILIS  244-271  312-342 DEHYDROGENASE PTYRA_ECOLI CHORISMATE MUTASE ESCHERICHIA COLI  329-370 PTYRR_ECOLI TRANSCRIPTIONAL ESCHERICHIA COLI  483-510 REGULATORY PROTEIN TYRR PTYSY_LACCA THYMIDYLATE SYNTHASE LACTOBACILLUS CASEI  139-173 PTYSY_LACLA THYMIDYLATE SYNTHASE LACTOCOCCUS LACTIS  75-109 PTYSY_STAAU THYMIDYLATE SYNTHASE STAPHYLOCOCCUS AUREUS  69-96 PUHPB_ECOLI SENSOR PROTEIN UHPB ESCHERICHIA COLI  276-303  316-343 PUHPB_SALTY SENSOR PROTEIN UHPB SALMONELLA TYPHIMURIUM  276-303  316-343 PUMUC_SALTY UMUC PROTEIN SALMONELLA TYPHIMURIUM  204-231 PUPP_ECOLI URACIL PHOSPHORIBOSYL- ESCHERICHIA COLI  30-57 TRANSFERASE PURAA_ECOLI URACIL PERMEASE ESCHERICHIA COLI  350-384 PURE1_HELPY UREASE ALPHA SUBUNIT HELICOBACTER PYLORI  15-42 PURE1_PROMI UREASE ALPHA SUBUNIT PROTEUS MIRABILIS  72-99 PURE1_PROVU UREASE ALPHA SUBUNIT PROTEUS VULGARIS  72-99 PURE1_UREUR UREASE ALPHA SUBUNIT UREAPLASMA UREALYTICUM  13-40  483-517 PURE2_HELPY UREASE BETA SUBUNIT HELICOBACTER PYLORI  62-99 PURED_HELPY UREASE OPERON URED HELICOBACTER PYLORI  17-44 PROTEIN PUREE_PROMI UREASE ACCESSORY PROTEUS MIRABILIS  57-84 PROTEIN UREE PUREF_KLEAE UREASE ACCESSORY KLEBSIELLA AEROGENES  20-47 PROTEIN UREF PRECURSOR PUS45_LACLA SECRETED 45 KD PROTEIN LACTOCOCCUS LACTIS  44-98  150-223  276-303 PRECURSOR PUSHA_ECOLI P-SUGAR HYDROLASE ESCHERICHIA COLI  56-83 PRECURSOR PUSHA_SALTY SILENT PROTEIN USHA (0) SALMONELLA TYPHIMURIUM  56-83 PRECURSOR PUVRA_ECOLI EXCINUCLEASE ABC ESCHERICHIA COLI  527-554  871-898 SUBUNIT A PUVRA_MICLU EXCINUCLEASE ABC MICROCOCCUS LUTEUS  579-606  619-646  684-718  922-949 SUBUNIT A PUVRA_PARDE EXCINUCLEASE ABC PARACOCCUS DENITRIFICANS  33-60 SUBUNIT A PUVRC_BACSU EXCINUCLEASE ABC BACILLUS SUBTILIS  342-372  511-538 SUBUNIT C PUVRC_ECOLI EXCINUCLEASE ABC ESCHERICHIA COLI  37-64  332-362 SUBUNIT C PUVRD_ECOLI HELICASE II ESCHERICHIA COLI  280-307 PVANA_ENTFC VANCOMYCIN RESISTANCE ENTEROCOCCUS FAECIUM  182-209 PROTEIN VANA PVANC_ENTGA VANCOMYCIN RESISTANCE ENTEROCOCCUS GALLINARUM  177-211 PROTEIN VANC PVIB4_AGRT5 VIRB4 PROTEIN PRECURSOR AGROBACTERIUM TUMEFACIENS  138-172 PVIB6_AGRT5 VIRB6 PROTEIN AGROBACTERIUM TUMEFACIENS  190-227 PVIB6_AGRT6 VIRB6 PROTEIN AGROBACTERIUM TUMEFACIENS  190-227 PVIB6_AGRT9 VIRB6 PROTEIN AGROBACTERIUM TUMEFACIENS  190-227 PVIBX_AGRT5 VIRB10 PROTEIN AGROBACTERIUM TUMEFACIENS  32-59  212-239 PVIBX_AGRT6 VIRB10 PROTEIN AGROBACTERIUM TUMEFACIENS  32-59  211-238 PVIBX_AGRT9 VIRB10 PROTEIN AGROBACTERIUM TUMEFACIENS  32-59  212-239 PVIC1_AGRRA VIRC1 PROTEIN AGROBACTERIUM RHIZOGENES  81-108 TUMEFACIENS PVIC1_AGRT5 VIRC1 PROTEIN AGROBACTERIUM TUMEFACIENS  81-108 PVIC1_AGRT6 VIRC1 PROTEIN AGROBACTERIUM TUMEFACIENS  81-108 PVID3_AGRRA VIRD3 PROTEIN AGROBACTERIUM RHIZOGENES  149-176  265-292 PVIRA_AGRT5 WIDE HOST RANGE (WHR) AGROBACTERIUM TUMEFACIENS  42-76  113-147  657-684 VIRA PROTEIN PVIRA_AGRT6 WIDE HOST RANGE (WHR) AGROBACTERIUM TUMEFACIENS  42-69  84-125  653-680 VIRA PROTEIN PVIRA_AGRT9 WIDE HOST RANGE (WHR) AGROBACTERIUM TUMEFACIENS  42-69  84-125  653-680 VIRA PROTEIN PVIRB_SHIFL VIRB TRANSCRIPTIONAL SHIGELLA FLEXNERI  37-71  107-134  187-214  252-291 ACTIVATOR PVIRF_YEREN VIRULENCE REGULON YERSINIA ENTEROCOLITICA  16-46 TRANSACTIVATOR PVIRG_AGRRA VIRG REGULATORY PROTEIN AGROBACTERIUM RHIZOGENES  34-61 PVIRL_AGRT6 LIMITED HOST RANGE (LHR) AGROBACTERIUM TUMEFACIENS  106-157 VIRA PROTEIN PVISC_ECOLI VISC PROTEIN ESCHERICHIA COLI  47-74 PVLPA_MYCHR VARIANT SURFACE ANTIGEN MYCOPLASMA HYORHINIS  74-112 A PRECURSOR PVM03_BORHE OUTER MEMBRANE LIPO- BORRELIA HERMSII  54-81 PROTEIN 3 PRECURSOR PVM07_BORHE OUTER MEMBRANE LIPO- BORRELIA HERMSII  332-359 PROTEIN 7 PRECURSOR PVM21_BORHE OUTER MEMBRANE LIPO- BORRELIA HERMSII  330-357 PROTEIN 21 PRECURSOR PVM24_BORHE OUTER MEMBRANE LIPO- BORRELIA HERMSII  47-143 PROTEIN 24 PRECURSOR PVM25_BORHE OUTER MEMBRANE LIPO- BORRELIA HERMSII  315-356 PROTEIN 25 PRECURSOR PVNFA_AZOVI NITROGEN FIXATION AZOTOBACTER VINELANDII  158-188  218-245 PROTEIN VNFA PVNFK_AZOCH NITROGENASE VANADIUM- AZOTOBACTER CHROOCOCCUM  68-95 IRON PROTEIN MCD 1 PVNFK_AZOVI NITROGENASE VANADIUM- AZOTOBACTER VINELANDII  68-95  372-403 IRON PROTEIN PVRP2_SALCH 65 KD VIRULENCE PROTEIN SALMONELLA CHOLERAE-SUIS  509-536 PVRP2_SALDU 65 KD VIRULENCE PROTEIN SALMONELLA DUBLIN  511-538 PVSDE_SALDU VIRULENCE PROTEIN VSDE SALMONELLA DUBLIN   3-36 PVVHB_VIBVU CYTOLYSIN SECRETION VIBRIO VULNIFICUS  30-75 PROTEIN PWAPA_STRMU WALL-ASSOCIATED PROTEIN STREPTOCOCCUS MUTANS   4-41  313-386 PRECURSOR PWRBA_ECOLI TRP REPRESSOR BINDING ESCHERICHIA COLI  89-116 PROTEIN PX191_ECOLI X POLYPEPTIDE ESCHERICHIA COLI  104-131 PX192_ECOLI X POLYPEPTIDE ESCHERICHIA COLI  104-131 PX193_ECOLI X POLYPEPTIDE ESCHERICHIA COLI  104-131 PXISA_ANASP EXCISASE A ANABAENA SP   4-31  89-116  135-162 PXPRB_ECOLI POSSIBLE INTEGRASE/ ESCHERICHIA COLI  268-295 RECOMBINASE XPRB PXYLA_STAXY XYLOSE ISOMERASE STAPHYLOCOCCUS XYLOSUS  411-438 PXYLK_KLEAE XYLULOSE KINASE KLEBSIELLA AEROGENES   2-29 PXYLK_LACPE XYLULOSE KINASE LACTOBACILLUS PENTOSUS  52-79  211-238  260-287 PXYLK_STAXY XYLULOSE KINASE STAPHYLOCOCCUS XYLOSUS   4-31  96-130  209-236  246-273 PXYLR_BACSU XYLOSE REPRESSOR BACILLUS SUBTILIS  75-102  260-287 PXYLR_LACPE XYLOSE REPRESSOR LACTOBACILLUS PENTOSUS  262-289 PXYLR_STAXY XYLOSE REPRESSOR STAPHYLOCOCCUS XYLOSUS  20-64  101-158  181-215  221-255  274-301 PXYLZ_PSEPU ELECTRON TRANSFER PSEUDOMONAS PUTIDA  51-78  104-131 COMPONENT PXYN4_CALSA PUTATIVE ENDO-1,4- CALDOCELLUM  198-225 BETA-XYLANASE SACCHAROLYTICUM PXYNA_BACCI O-1,4-BETA-XYLANASE BACILLUS CIRCULANS  47-74 PRECURSOR PXYNA_BACS5 ENDO-1,4-BETA-XYLANASE BACILLUS SP  173-200 PRECURSOR PXYNA_BACSU ENDO-1,4-BETA-XYLANASE BACILLUS SUBTILIS  47-74 PRECURSOR PXYNA_CALSA ENDO-1,4-BETA-XYLANASE A CALDOCELLUM  132-159  226-256 PRECURSOR SACCHAROLYTICUM PXYNA_PSEFL ENDO-1,4-BETA-XYLANASE PSEUDOMONAS FLUORESCENS  33-82 PRECURSOR PXYNB_BACPU BETA-XYLOSIDASE BACILLUS PUMILUS  459-486 PXYNB_CALSA BETA-XYLOSIDASE CALDOCELLUM  440-474 SACCHAROLYTICUM PXYNB_PSEFL ENDO-1,4-BETA-XYLANASE PSEUDOMONAS FLUORESCENS  51-78  251-278  317-344  475-502 PRECURSOR PXYNC_PSEFL ALPHA-L-ARABINOFURAN- PSEUDOMONAS FLUORESCENS  51-78  251-278 OSIDASE C PRECURSOR PXYNC_STRLI ENDO-1,4-BETA-XYLANASE STREPTOMYCES LIVIDANS  183-210 C PRECURSOR PY14K_HALMO HYPOTHETICAL 14.9 KD HALOCOCCUS MORRHUAE  56-83 PROTEIN PY23K_STROR HYPOTHETICAL 23.1 KD STREPTOCOCCUS ORALIS  78-105 PROTEIN PY36K_METSM HYPOTHETICAL 36.7 KD METHANOBREVIBACTER SMITHII  128-162  172-218 PROTEIN PYAAC_ECOLI HYPOTHETICAL 34.6 KD ESCHERICHIA COLI  271-298 PROTEIN PYAAC_PSEFL HYPOTHETICAL 33.9 KD PSEUDOMONAS FLUORESCENS  274-301 PROTEIN PYAAM_ECOLI HYPOTHETICAL 59.1 KD ESCHERICHIA COLI  45-72 PROTEIN PYAAP_ECOLI HYPOTHETICAL 56.6 KD ESCHERICHIA COLI  352-379 PROTEIN PYAAQ_ECOLI HYPOTHETICAL 28.5 KD ESCHERICHIA COLI  155-182 PROTEIN PYABC_ECOLI HYPOTHETICAL 34.9 KD ESCHERICHIA COLI  131-158 PROTEIN PYABG_ECOLI HYPOTHETICAL 89.7 KD ESCHERICHIA COLI  446-480  627-654 PROTEIN PYABN_ECOLI HYPOTHETICAL 63.9 KD ESCHERICHIA COLI  428-455 PROTEIN PYAC3_PSEAE HYPOTHETICAL 23.9 KD PSEUDOMONAS AERUGINOSA  48-75  150-177 PROTEIN PYAD2_CLOAB HYPOTHETICAL 21.6 KD CLOSTRIDIUM ACETOBUTYLICUM  75-109  114-144 PROTEIN PYAD5_CLOAB HYPOTHETICAL 36.9 KD CLOSTRIDIUM ACETOBUTYLICUM  132-159  165-196  210-237 PROTEIN PYAD6_CLOAB HYPOTHETICAL PROTEIN CLOSTRIDIUM ACETOBUTYLICUM  21-55 PYADA_YEREN INVASIN PRECURSOR YERSINIA ENTEROCOLITICA  196-230  247-274  318-381 PYADA_YERPS INVASIN PRECURSOR YERSINIA PSEUDOTUBERCULOSIS  255-282  297-360 PYADC_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  13-40  101-131 PYAEA_RICRI 17 KD PROTEIN RICKETTSIA RICKETTSII  107-134 PYAFB_ECOLI HYPOTHETICAL 29.4 KD ESCHERICHIA COLI  221-248 PROTEIN PYAFD_ECOLI HYPOTHETICAL 29.1 KD ESCHERICHIA COLI  34-71 PROTEIN PYAFE_ECOLI HYPOTHETICAL 23.0 KD ESCHERICHIA COLI  123-150 PROTEIN PYA1B_ESCFE HYPOTHETICAL PROTEIN ESCHERICHIA FERGUSONII   2-35 PYAM1_SALTY PUTATIVE AMIDASE SALMONELLA TYPHIMURIUM  73-100 PYAT1_SYNY3 HYPOTHETICAL 13.0 KD SYNECHOCYSTIS SP  26-60 PROTEIN PYATP_MYCLE HYPO PROTEIN PUTATIVE MYCOBACTERIUM LEPRAE  23-57  91-158  511-538 ATP OPERON PYATR_BACFI HYPOL ATP-BINDING BACILLUS FIRMUS  211-238 TRANSPORT PROTEIN PYATS_MYCGA HYPOTHETICAL PROTEIN MYCOPLASMA GALLISEPTICUM   7-41 PYATU_MYCGA HYPOTHETICAL PROTEIN MYCOPLASMA GALLISEPTICUM  29-56  60-87 PYAV5_XANCV HYPOTHETICAL 50 KD XANTHOMONAS CAMPESTRIS  68-98  199-226 AVIRULENCE PROTEIN PYBAH_ECOLI HYPOTHETICAL 24.8 KD ESCHERICHIA COLI  49-79 PROTEIN PYBBA_ECOLI HYPOTHETICAL ABC ESCHERICHIA COLI   6-69 TRANSPORTER PYBED_ECOLI HYPOTHETICAL 9.8 KD ESCHERICHIA COLI  51-82 PROTEIN PYBID_ECOLI HYPOTHETICAL 14.1 KD ESCHERICHIA COLI  97-124 PROTEIN PYCAE_ECOLI HYPOTHETICAL 24.5 KD ESCHERICHIA COLI  34-61 PROTEIN PYCBA_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  38-65 PYCBL_BACUN HYPOTHETICAL 17.3 KD BACTEROIDES UNIFORMIS  66-100 PROTEIN PYCEA_BACLA HYPOTHETICAL PROTEIN BACILLUS LAUTUS  111-138 PYCFC_ECOLI HYPOTHETICAL 22.9 KD ESCHERICHIA COLI  52-79 PROTEIN PYCHR_ALCEU HYPOTHETICAL PROTEIN ALCALIGENES EUTROPHUS  21-48 PYC1B_ECOLI HYPOTHETICAL 20.8 KD ESCHERICHIA COLI  16-43 PROTEIN PYC1F_ECOLI 18.6 KD PROTEIN ESCHERICHIA COLI   7-68  134-166 PYC1K_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  35-62 PYCL1_ECOLI HYPOTHETICAL 43.3 KD ESCHERICHIA COLI  54-81 PROTEIN PYCP3_SYNPY HYPOTHETICAL 29.3 KD SYNECHOCOCCUS SP  194-221 PROTEIN PYCP3_SYNY3 HYPOTHETICAL 28.0 KD SYNECHOCYSTIS SP   7-34  120-154 PROTEIN PYCP5_SYNY3 HYPOTETHICAL 39.5 KD SYNECHOCYSTIS SP  277-308 PROTEIN PYCPG_MASLA HYPOTHETICAL PROTEIN MASTIGOCLADUS LAMINOSUS   2-29 PYCPY_PSEA9 HYPO PHYCOCYANIN PSEUDANABAENA SP  380-407 OPERON PROTEIN Y PYCR2_BACTK HYPOTHETICAL 29.1 KD BACILLUS THURINGIENSIS  42-74  153-180 PROTEIN PYCS5_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  32-59 PRECURSOR PYCW5_BACSU HYPOTHETICAL PROTEIN BACILLUS SUBTILIS   3-30  59-86 PYD3M_HERAU HYPOTHETICAL 68.4 KD HERPETOSIPHON AURANTIACUS  12-39  151-178  360-416 PROTEIN PYDBA_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  32-66  117-144  163-216  233-267  295-329  458-485  676-717 1136-1163 1499-1530 PYDBD_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  80-107 PYDDB_ECOLI HYPOTHETICAL 86.7 KD ESCHERICHIA COLI  606-641  683-714  726-753 PROTEIN PYDDC_ECOLI HYPOTHETICAL 80.8 KD ESCHERICHIA COLI  373-400  421-452  621-648 PROTEIN PYDDD_ECOLI HYPOTHETICAL 24.1 KD ESCHERICHIA COLI  133-174 PROTEIN PYDEH_ECOLI HYPOTHETICAL 20.5 KD ESCHERICHIA COLI  96-130 PROTEIN PYDEJ_ECOLI HYPOTHETICAL 18.3 KD ESCHERICHIA COLI   4-38 PROTEIN PYDEK_ECOLI HYPOTHETICAL 65.5 KD ESCHERICHIA COLI  333-360  524-551  565-592 PROTEIN PYDNN_BORBU HYPOTHETICAL 11.2 KD BORRELIA BURGDORFERI   6-36 PROTEIN PYDO1_SULSO HYPOTHETICAL 14.7 KD SULFOLOBUS SOLFATARICUS  17-58  71-103 PROTEIN PYDO3_SULSO HYPOTHETICAL 16.9 KD SULFOLOBUS SOLFATARICUS  11-38 PROTEIN PYEBA_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  93-120 PYEBG_ECOLI HYPOTHETICAL 10.7 KD ESCHERICHIA COLI  50-77 PROTEIN PYEEE_ECOLI HYPOTHETICAL 38.1 KD ESCHERICHIA COLI  43-70 PROTEIN PYEEF_ECOLI HYPO 49.8 KD TRANSPORT ESCHERICHIA COLI  147-174 PROTEIN PYEGA_ECOLI HYPOTHETICAL IN DCD ESCHERICHIA COLI  145-172 3′ REGION PYEHA_ECOLI HYPOTHETICAL 36.9 KD ESCHERICHIA COLI  69-106  283-310 PROTEIN PYEHB_ECOLI HYPOTHETICAL 92.3 KD ESCHERICHIA COLI  151-178  501-545 PROTEIN PYEHD_ECOLI HYPOTHETICAL 19.1 KD ESCHERICHIA COLI  96-123 PROTEIN PYEHF_ECOLI HYPOTHETICAL 141.0 KD ESCHERICHIA COLI  543-570 PROTEIN PYEHI_ECOLI HYPOTHETICAL 138.1 KD ESCHERICHIA COLI  35-70  102-129 PROTEIN PYEHU_ECOLI HYPOTHETICAL 62.1 KD ESCHERICHIA COLI  326-353 PROTEIN PYEIC_ECOLI HYPOTHETICAL 33.6 KD ESCHERICHIA COLI  46-80 PROTEIN PYEIF_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  61-88 PYEIJ_ECOLI HYPOTHETICAL 43.4 KD ESCHERICHIA COLI  15-42 PROTEIN PYEJA_ECOLI HYPOTHETICAL ABC ESCHERICHIA COLI  83-110 TRANSPORTER PYEJF_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  453-480 PYEJO_ECOLI HYPOTHETICAL 91.2 KD ESCHERICHIA COLI  399-433 PROTEIN PYFHD_ECOLI HYPOTHETICAL 40.6 KD ESCHERICHIA COLI  175-202 PROTEIN PYFU2_BACST HYPOTHETICAL 30.6 KD BACILLUS STEAROTHERMOPHILUS  133-160 PROTEIN PYFXK_BRAJA HYPOTHETICAL PROTEIN BRADYRHIZOBIUM JAPONICUM  109-150 PYGAP_BACME HYPOTHETICAL 37.7 KD BACILLUS MEGATERIUM  40-67 PROTEIN PYGFD_ECOLI HYPOTHETICAL 29.4 KD ESCHERICHIA COLI  214-241 PROTEIN PYGGB_ECOLI HYPOTHETICAL 30.9 KD ESCHERICHIA COLI  225-252 PROTEIN PYGGG_ECOLI HYPOTHETICAL 31.8 KD ESCHERICHIA COLI  209-236 PROTEIN PYG12_BACTU HYPOTHETICAL 22.8 KD BACILLUS THURINGIENSIS  26-61 PROTEIN PYG12_PSEPU HYPOTHETICAL 32.4 KD PSEUDOMONAS PUTIDA  145-172 PROTEIN PYG1F_ECOLI HYPOTHETICAL 48.4 KD ESCHERICHIA COLI  223-264 PROTEIN PYGL4_BACST HYPOTHETICAL 35.5 KD BACILLUS STEAROTHERMOPHILUS   6-33 PROTEIN PYGL5_BACST HYPOTHETICAL PROTEIN BACILLUS STEAROTHERMOPHILUS  182-209 PYGLN_BACCE HYPOTHETICAL 15 KD BACILLUS CEREUS  79-124 PROTEIN PYGRD_BACSU HYPOTHETICAL PROTEIN BACILLUS SUBTILIS  20-47 PYGRE_BACSU HYPOTHETICAL 17.1 KD BACILLUS SUBTILIS  84-111 PROTEIN PYGRP_BACSU HYPOTHETICAL 39.0 KD BACILLUS SUBTILIS  98-125 PROTEIN PYGRP_CLOAB HYPOTHETICAL 38.8 KD CLOSTRIDIUM ACETOBUTYLICUM  160-210 PROTEIN PYGT2_STRMU HYPOTHETICAL PROTEIN 2 STREPTOCOCCUS MUTANS   4-40  110-138  235-262 PYHAB_ECOLI HYPOTHETICAL 20.6 KD ESCHERICHIA COLI  20-66 PROTEIN PYHAC_ECOLI HYPOTHETICAL 45.2 KD ESCHERICHIA COLI  69-96 PROTEIN PYHAF_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  44-71  138-165 PYHBG_ECOLI PROBABLE ABC ESCHERICHIA COLI  176-203 TRANSPORTER PYHBG_PSEPU PROBABLE ABC PSEUDOMONAS PUTIDA  74-101  106-133  147-174 TRANSPORTER PYHBG_THIFE PROBABLE ABC THIOBACILLUS FERROOXIDANS  113-140 TRANSPORTER PYHDF_ECOLI HYPOTHETICAL 55.4 KD ESCHERICHIA COLI  267-297 PROTEIN PYHEM_BACSU HYPOTHETICAL 32.0 KD BACILLUS SUBTILIS  222-253 PROTEIN PYHET_ANASP HYPOTHETICAL PROTEIN ANABAENA SP  72-99 PYHHA_ECOLI HYPOTHETICAL 16.6 KD ESCHERICHIA COLI  56-84 PROTEIN PYHHG_ECOLI HYPOTHETICAL 15.1 KD ESCHERICHIA COLI  43-77 PROTEIN PYHHH_ECOLI HYPOTHETICAL 14.5 KD ESCHERICHIA COLI  43-73 PROTEIN PYHI1_LACLA HYPOTHETICAL PROTEIN LACTOCOCCUS LACTIS  167-194 PYHI3_LACLA HYPOTHETICAL 38.0 KD LACTOCOCCUS LACTIS  90-124  132-159 PROTEIN PYHI6_LACLA HYPOTHETICAL 30.7 KD LACTOCOCCUS LACTIS  92-148 PROTEIN PYHI8_LACLA HYPOTHETICAL 30.7 KD LACTOCOCCUS LACTIS  77-104  156-183 PROTEIN PYHLB_STAAU HYPOTHETICAL PROTEIN STAPHYLOCOCCUS AUREUS  18-67 PYHLB_VIBCH HYPOTHETICAL 18.3 KD VIBRIO CHOLERAE  99-126 PROTEIN PYHMF_METFE HYPOTHETICAL 32.2 KD METHANOTHERMUS FERVIDUS  106-133 PROTEIN PYHS1_CLOAB HYPOTHETICAL 11.0 KD CLOSTRIDIUM ACETOBUTYLICUM  41-85 PROTEIN PYHSA_CLOAB HYPOTHETICAL 20.6 KD CLOSTRIDIUM ACETOBUTYLICUM  98-125 PROTEIN PYHSC_CLOAB HYPOTHETICAL 42.4 KD CLOSTRIDIUM ACETOBUTYLICUM  25-52  208-253  276-310 PROTEIN PYHV1_LACHE HYPOTHETICAL PROTEIN LACTOBACILLUS HELVETICUS  93-120  127-154 PYHYA_PSESN HYPOTHETICAL PROTEIN PSEUDOMONAS SP  217-266 PYI11_HALHA HYPOTHETICAL 38.0 KD HALOBACTERIUM HALOBIUM  245-272 PROTEIN PYI32_MYCTU IS986 HYPOTHETICAL 6.6 KD MYCOBACTERIUM TUBERCULOSIS  19-46 PROTEIN PYI42_PSEAY HYPOTHETICAL 42.6 KD PSEUDOMONAS AMYLODERAMOSA   9-36 PROTEIN PYI48_METSM ISM1 HYPOTHETICAL 48.3 KD METHANOBREVIBACTER SMITHII  73-100  154-184  338-365 PROTEIN PYI52_HALHA HYPOTHETICAL 31 KD HALOBACTERIUM HALOBIUM  86-113 PROTEIN PYIBB_ECOLI HYPOTHETICAL 34.0 KD ESCHERICHIA COLI  202-239 PROTEIN PYIBD_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI   9-43 PYIBF_ECOLI HYPOTHETICAL 22.6 KD ESCHERICHIA COLI  131-158 PROTEIN PYIBG_ECOLI HYPOTHETICAL 18.1 KD ESCHERICHIA COLI  70-97 PROTEIN PYICC_ECOLI HYPOTHETICAL 33.2 KD ESCHERICHIA COLI  143-170 PROTEIN PYICD_ECOLI HYPOTHETICAL 31.1 KD ESCHERICHIA COLI  132-159 PROTEIN PYICH_ECOLI HYPOTHETICAL 62.3 KD ESCHERICHIA COLI  408-435 PROTEIN PYICI_ECOLI HYPOTHETICAL 88.1 KD ESCHERICHIA COLI  122-149 PROTEIN PYICN_ECOLI HYPOTHETICAL 18.2 KD ESCHERICHIA COLI  76-103 PROTEIN PYICO_ECOLI HYPOTHETICAL 49.9 KD ESCHERICHIA COLI  320-347 PROTEIN PYIDB_ECOLI HYPOTHETICAL 13.8 KD ESCHERICHIA COLI  34-78 PROTEIN PYIDE_ECOLI HYPOTHETICAL 58.9 KD ESCHERICHIA COLI  86-113  182-209  277-304 PROTEIN PYIDI_ECOLI HYPOTHETICAL 15.7 KD ESCHERICHIA COLI  56-83 PROTEIN PYIDK_ECOLI HYPOTHETICAL 62.1 KD ESCHERICHIA COLI   2-39 PROTEIN PYIDP_ECOLI HYPOTHETICAL 27.3 KD ESCHERICHIA COLI  63-97 PROTEIN PYIEA_ECOLI HYPOTHETICAL 49.2 KD ESCHERICHIA COLI  221-248 PROTEIN PYIEC_ECOLI HYPOTHETICAL 60.6 KD ESCHERICHIA COLI  20-58  270-297 PROTEIN PYIEC_ERWCH HYPOTHETICAL PROTEIN ERWINIA CHRYSANTHEMI  22-67 PYIED_ECOLI HYPOTHETICAL 34.8 KD ESCHERICHIA COLI  86-120 PROTEIN PYIEG_ECOLI HYPOTHETICAL 46.9 KD ESCHERICHIA COLI  293-327 PROTEIN PYIEH_ECOLI HYPOTHETICAL 24.7 KD ESCHERICHIA COLI  51-78 PROTEIN PYIEM_ECOLI HYPOTHETICAL 15.0 KD ESCHERICHIA COLI  73-105 PROTEIN PYIEO_ECOLI HYPOTHETICAL 51.5 KD ESCHERICHIA COLI  201-242  380-407 PROTEIN PYIFC_ECOLI HYPOTHETICAL 39.6 KD ESCHERICHIA COLI  175-202 PROTEIN PYIGJ_ECOLI HYPOTHETICAL 14.0 KD ESCHERICHIA COLI  51-92 PROTEIN PYIGM_ECOLI HYPOTHETICAL 33.7 KD ESCHERICHIA COLI  120-154 PROTEIN PYIGN_ECOLI HYPOTHETICAL 54.7 KD ESCHERICHIA COLI  207-234 PROTEIN PYIGO_ECOLI HYPOTHETICAL 28.1 KD ESCHERICHIA COLI  67-94 PROTEIN PYIGP_ECOLI HYPOTHETICAL 22.3 KD ESCHERICHIA COLI  173-200 PROTEIN PYIGT_ECOLI HYPOTHETICAL 27.8 KD ESCHERICHIA COLI  132-159 PROTEIN PYIHB_ECOLI HYPOTHETICAL 21.2 KD ESCHERICHIA COLI  13-40 PROTEIN PYIHD_ECOLI HYPOTHETICAL 10.3 KD ESCHERICHIA COLI  28-55 PROTEIN PYIHF_ECOLI HYPOTHETICAL 54.1 KD ESCHERICHIA COLI  272-306 PROTEIN PYIHI_ECOLI HYPOTHETICAL 19.1 KD ESCHERICHIA COLI  112-139 PROTEIN PYIHK_ECOLI HYPOTHETICAL 65.4 KD ESCHERICHIA COLI   4-31 PROTEIN PYIHM_ECOLI HYPOTHETICAL 36.9 KD ESCHERICHIA COLI  83-110  120-154  297-324 PROTEIN PYIHO_ECOLI HYPOTHETICAL 81.8 KD ESCHERICHIA COLI  612-646 PROTEIN PYIHP_ECOLI HYPOTHETICAL 53.1 KD ESCHERICHIA COLI  357-384 PROTEIN PYIHV_ECOLI HYPOTHETICAL 31.9 KD ESCHERICHIA COLI  72-99 PROTEIN PYIHX_ECOLI HYPOTHETICAL 23.5 KD ESCHERICHIA COLI   9-36 PROTEIN PYIHZ_ECOLI HYPOTHETICAL 15.9 KD ESCHERICHIA COLI   6-33 PROTEIN PYIIP_ECOLI HYPOTHETICAL 32.9 KD ESCHERICHIA COLI  22-63 PROTEIN PYIIU_ECOLI HYPOTHETICAL 9.6 KD ESCHERICHIA COLI  28-71 PROTEIN PYIJC_ECOLI HYPOTHETICAL 26.6 KD ESCHERICHIA COLI  136-163 PROTEIN PYIJH_ECOLI HYPOTHETICAL 78.3 KD ESCHERICHIA COLI  225-263 PROTEIN PYIJK_ECOLI HYPOTHETICAL 11.2 KD ESCHERICHIA COLI  26-53 PROTEIN PYIJO_ECOLI HYPOTHETICAL 32.1 KD ESCHERICHIA COLI  214-241 PROTEIN PYIJP_ECOLI HYPOTHETICAL 66.6 KD ESCHERICHIA COLI  110-137  419-446 PROTEIN PYINL_LISMO HYPOTHETICAL 26.8 KD LISTERIA MONOCYTOGENES   7-34 PROTEIN PYIS1_SHISO INSERTION ELEMENT IS600 SHIGELLA SONNEI  62-89 PYIS1_STRCO IS110 HYPOTHETICAL 43.6 KD STREPTOMYCES COELICOLOR  125-152 PROTEIN PYIS3_SHISO INSERTION ELEMENT IS629 SHIGELLA SONNEI  66-100 PYISP_BACSP HYPOTHETICAL 42.1 KD BACILLUS SP  312-339 PROTEIN PYJAG_ECOLI HYPOTHETICAL 22.6 KD ESCHERICHIA COLI  51-78 PROTEIN PYJAJ_ECOLI HYPOTHETICAL 20.4 KD ESCHERICHIA COLI  88-122 PROTEIN PYJBH_ECOLI HYPOTHETICAL 78.5 KD ESCHERICHIA COLI  93-120 PROTEIN PYJBL_ECOLI HYPOTHETICAL 9.7 KD ESCHERICHIA COLI  30-57 PROTEIN PYJBM_ECOLI HYPOTHETICAL 26.7 KD ESCHERICHIA COLI  112-149 PROTEIN PYJBQ_ECOLI HYPOTHETICAL 15.7 KD ESCHERICHIA COLI   2-29 PROTEIN PYJCC_ECOLI HYPOTHETICAL 60.8 KD ESCHERICHIA COLI  38-65  414-441  451-492 PROTEIN PYJCE_ECOLI HYPOTHETICAL 60.5 KD ESCHERICHIA COLI  454-481 PROTEIN PYJCG_ECOLI HYPOTHETICAL 59.2 KD ESCHERICHIA COLI  394-421 PROTEIN PYJCO_ECOLI HYPOTHETICAL 25.1 KD ESCHERICHIA COLI  91-118 PROTEIN PYJCP_ECOLI HYPOTHETICAL 53.4 KD ESCHERICHIA COLI  242-269 PROTEIN PYJCS_ECOLI HYPOTHETICAL 73.7 KD ESCHERICHIA COLI  366-396 PROTEIN PYJCW_ECOLI HYPOTHETICAL ABC ESCHERICHIA COLI  50-94 TRANSPORTER PYJDA_ECOLI HYPOTHETICAL 84.2 KD ESCHERICHIA COLI   2-29  451-485 PROTEIN PYJDB_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  103-134 PYJJA_ECOLI HYPOTHETICAL 17.5 KD ESCHERICHIA COLI  35-69  88-129 PROTEIN PYKAB_BACFI HYPOTHETICAL 48.8 KD BACILLUS FIRMUS  321-355 PROTEIN PYLA1_LACAC HYPOTHETICAL PROTEIN LACTOBACILLUS ACIDOPHILUS  47-74 PYLA2_LACAC HYPOTHETICAL 14.5 KD LACTOBACILLUS ACIDOPHILUS  15-42 PROTEIN PYLA3_LACAC HYPOTHETICAL 14.4 KD LACTOBACILLUS ACIDOPHILUS  47-74 PROTEIN PYLAC_SULSO HYPOTHETICAL 24.4 KD SULFOLOBUS SOLFATARICUS  23-50 PROTEIN PYLP3_PSEPU HYPOTHETICAL 44.7 KD PSEUDOMONAS PUTIDA  186-213  314-341 PROTEIN PYLPA_YEREN YLPA LIPOPROTEIN YERSINIA ENTEROCOLITICA  184-221 PRECURSOR PYLT3_ANAVA HYPOTHETICAL 22.6 KD ANABAENA VARIABILIS  172-199 PROTEIN PYLUD_LACLA HYPOTHETICAL 29.7 KD LACTOCOCCUS LACTIS  35-70 PROTEIN PYME2_BACSU HYOPTHETICAL 35.3 KD BACILLUS SUBTILIS  52-79 PROTEIN PYMG2_MYCGE HYPOTHETICAL 114.4 KD MYCOPLASMA GENITALIUM  56-83  159-193  420-445  981-1008 PROTEIN PRECURSOR PYNGA_CLOPE HYPOTHETICAL PROTEIN CLOSTRIDIUM PERFRINGENS  139-166 PYNGB_CLOPE HYPOTHETICAL 31.2 KD CLOSTRIDIUM PERFRINGENS  12-49  63-97  182-211 PROTEIN PYNI1_METTL HYPOTHETICAL PROTEIN METHANOCOCCUS  55-89 THERMOLITHOTROPHICUS PYNQ1_PARDE HYPOTHETICAL 9.3 KD PARACOCCUS DENITRIFICANS  52-86 PROTEIN PYNT3_ANASP HYPOTHETICAL 28.1 KD ANABAENA SP  171-198 PROTEIN PYNT5_ANASP HYPOTHETICAL PROTEIN ANABAENA SP  87-165 PYOHD_ECOLI HYPOTHETICAL 21.4 KD ESCHERICHIA COLI   5-32 PROTEIN PYOHG_ECOLI HYPOTHETICAL 43.3 KD ESCHERICHIA COLI  104-171  289-316 PROTEIN PYOJA_ECOLI HYPOTHETICAL 15.0 KD ESCHERICHIA COLI  17-44 PROTEIN PYOJE_ECOLI HYPOTHETICAL 93.5 KD ESCHERICHIA COLI  221-248 PROTEIN PYOJF_ECOLI HYPOTHETICAL 9.5 KD ESCHERICHIA COLI  41-82 PROTEIN PYOJH_ECOLI HYPOTHETICAL 54.3 KD ESCHERICHIA COLI  145-193 PROTEIN PYOJJ_ECOLI HYPOTHETICAL 36.2 KD ESCHERICHIA COLI  94-121 PROTEIN PYOM2_PHOS9 HYPOTHETICAL PROTEIN IN PHOTOBACTERIUM SP  32-59 OMPH 3′ REGION PYOPH_YEREN PROTEIN-TYROSINE YERSINIA ENTEROCOLITICA  63-105 PHOSPHATASE YOPH PYOPH_YERPS PROTEIN-TYROSINE YERSINIA PSEUDOTUBERCULOSIS  63-105 PHOSPHATASE YOPH PYOPN_YEREN OUTER MEMBRANE PROTEIN YERSINIA ENTEROCOLITICA  23-50  66-93  235-262 YOPN PYOPN_YERPS OUTER MEMBRANE PROTEIN YERSINIA PSEUDOTUBERCULOSIS  23-50  66-93  235-262 YOPN PYOPQ_YEREN YOPQ PROTEIN PRECURSOR YERSINIA ENTEROCOLITICA  61-88 PYORA_HAEIN HYPOTHETICAL 31.5 KD HAEMOPHILUS INFLUENZAE  147-174 PROTEIN PYORA_LISMO HYPOTHETICAL 25.6 KD LISTERIA MONOCYTOGENES  32-77 PROTEIN PYORA_PYRWO HYPOTHETICAL 24.7 KD PYROCOCCUS WOESEI  183-210 PROTEIN PYORB_HAEIN HYPOTHETICAL 19.8 KD HAEMOPHILUS INFLUENZAE  39-66 PROTEIN PYORC_HAEIN HYPOTHETICAL 19.9 KD HAEMOPHILUS INFLUENZAE  49-79 PROTEIN PYORE_HAEIN 8 KD PROTEIN HAEMOPHILUS INFLUENZAE  47-74  82-109 PYORF_HAEIN 26.8 KD PROTEIN HAEMOPHILUS INFLUENZAE  199-229 PYORH_HAEIN HYPOTHETICAL 13.7 KD HAEMOPHILUS INFLUENZAE   7-34 PROTEIN PYORI_HAEIN 95.4 KD PROTEIN HAEMOPHILUS INFLUENZAE  416-450  688-722 PYORQ_BACSU HYPOTHETICAL 34 KD BACILLUS SUBTILIS  148-175 PROTEIN PYORX_PYRWO HYPOTHETICAL PROTEIN PYROCOCCUS WOESEI  66-93 PYORZ_LISMO HYPOTHETICAL 16.9 KD LISTERIA MONOCYTOGENES  27-54 PROTEIN PYP15_STAAU HYPOTHETICAL 15.5 KD STAPHYLOCOCCUS AUREUS  71-98  110-137 PROTEIN PYP23_BACSU HYPOTHETICAL 22.5 KD BACILLUS SUBTILIS  57-84 PROTEIN PYP23_STAAU HYPOTHETICAL 22.2 KD STAPHYLOCOCCUS AUREUS  29-70 PROTEIN PYP2A_STAAU HYPOTHETICAL 26.9 KD STAPHYLOCOCCUS AUREUS  34-104 PROTEIN PYP2B_STAAU HYPOTHETICAL 27.0 KD STAPHYLOCOCCUS AUREUS  23-60  62-89  179-206 PROTEIN PYP2C_STAAU HYPOTHETICAL 27.7 KD STAPHYLOCOCCUS AUREUS  13-83  129-176 PROTEIN PYP7_AGRT4 HYPOTHETICAL PROTEIN 7 AGROBACTERIUM TUMEFACIENS  29-56 PYPA2_LEGPN HYPOTHETICAL PROTEIN LEGIONELLA PNEUMOPHILA  94-135 PYPAS_ENTFA HYPOTHETICAL 13 KD ENTEROCOCCUS FAECALIS  79-106 PROTEIN PYPA_BACAN HYPOTHETICAL 21.6 KD BACILLUS ANTHRACIS  13-47  115-162 PROTEIN PYPC1_ECOLI HYPOTHETICAL 27.6 KD ESCHERICHIA COLI   5-32 PROTEIN PYPDA_BACSU HYPOTHETICAL 27.3 KD BACILLUS SUBTILIS  184-222 PROTEIN PYPFT_ECOLI HYPOTHETICAL 12.6 KD ESCHERICHIA COLI  16-43 PROTEIN PYPH1_SYNP2 HYPOTHETICAL 18.1 KD SYNECHOCOCCUS SP  34-61 PROTEIN PYP16_CLOPE HYPOTHETICAL 19.7 KD CLOSTRIDIUM PERFRINGENS   7-34  43-77  83-149 PROTEIN PYP19_CLOPE HYPOTHETICAL 14.5 KD CLOSTRIDIUM PERFRINGENS   2-59 PROTEIN PYPIX_CLOPE HYPOTHETICAL 38.4 KD CLOSTRIDIUM PERFRINGENS  110-137  263-290  303-340 PROTEIN PYPIY_PSEAE HYPOTHETICAL 38.5 KD PSEUDOMONAS AERUGINOSA  22-52 PROTEIN PYPP_BACSU HYPOTHETICAL PROCESSING BACILLUS SUBTILIS  329-356 PROTEASE PYPQQ_KLEPN HYPOTHETICAL PROTEIN KLEBSIELLA PNEUMONIAE  243-270 PYPS2_PLEBO HYPOTHETICAL 13.1 KD LECTONEMA BORYANUM  27-54 PROTEIN PYPV1_METTF HYPOTHETICAL 40.7 KD METHANOBACTERIUM  58-85  308-335 PROTEIN THERMOFORMICICUM PYPV3_METTF HYPOTHETICAL 22.5 KD METHANOBACTERIUM   3-30 PROTEIN THERMOFORMICICUM PYPV7_METTF HYPOTHETICAL 17.3 KD METHANOBACTERIUM  69-117 PROTEIN THERMOFORMICICUM PYPVB_METTF HYPOTHETICAL 49.6 KD METHANOBACTERIUM  333-360  389-430 PROTEIN THERMOFORMICICUM PYPYB_BACSU HYPOTHETICAL 72.4 KD BACILLUS SUBTILIS  602-636 PROTEIN PYPZ1_METTF HYPOTHETICAL 40.6 KD METHANOBACTERIUM  58-85  308-335 PROTEIN THERMOFORMICICUM PYPZ2_METTF HYPOTHETICAL 33.1 KD METHANOBACTERIUM  38-65  154-188 PROTEIN THERMOFORMICICUM PYPZ5_METTF HYPOTHETICAL 54.1 KD METHANOBACTERIUM  193-220  226-253  381-408 PROTEIN THERMOFORMICICUM PYPZ7_METTF HYPOTHETICAL 9.7 KD METHANOBACTERIUM   5-78 PROTEIN THERMOFORMICICUM PYR18_THEPE HYPOTHETICAL 18.7 KD THERMOFILUM PENDENS  82-109 PROTEIN PYRB1_HALCU HYPOTHETICAL 40 KD OF HALOBACTERIUM CUTIRUBRUM  20-51 PROTEIN GTP-BINDING PROTEIN PYREC_SYNP2 HYPOTHETICAL 28.7 KD SYNECHOCOCCUS SP  49-76 PROTEIN PYRF0_SALTY HYPOTHETICAL 40.6 KD SALMONELLA TYPHIMURIUM  143-190 PROTEIN PYRF2_SALTY HYPOTHETICAL 51.0 KD SALMONELLA TYPHIMURIUM  428-455 PROTEIN PYRF5_SALTY HYPOTHETICAL 20.6 KD SALMONELLA TYPHIMURIUM  29-56 PROTEIN PYRF6_SALTY HYPOTHETICAL 36.6 KD SALMONELLA TYPHIMURIUM  130-157 PROTEIN PYRG2_LACLA HYPOTHETICAL PROTEIN LACTOCOCCUS LACTIS  140-167 PYRL1_METVA HYPOTHETICAL PROTEIN METHANOCOCCUS VANNIELII  40-93  129-156 PYRP2_METVA HYPOTHETICAL 11.6 KD METHANOCOCCUS VANNIELII  13-40 PROTEIN PYRP2_SULAC HYPOTHETICAL 11.5 KD SULFOLOBUS ACIDOCALDARIUS   5-51 PROTEIN PYRP3_SULAC HYPOTHETICAL 14.5 KD SULFOLOBUS ACIDOCALDARIUS  37-71 PROTEIN PYRTP_BACSU HYPOTHETICAL 25.3 KD BACILLUS SUBTILIS  29-56 PROTEIN PYRTS_BACSU HYPOTHETICAL 11.4 KD BACILLUS SUBTILIS   3-30  44-81 PROTEIN PYSCB_YEREN HYPOTHETICAL YSC OPERON YERSINIA ENTEROCOLITICA  90-121 PROTEIN B PYSCC_YEREN YSC OPERON PROTEIN C YERSINIA ENTEROCOLITICA  38-72  365-399 PRECURSOR PYSCD_YEREN YSC OPERON PROTEIN D YERSINIA ENTEROCOLITICA  242-269 PYSCH_YEREN YSC OPERON PROTEIN H YERSINIA ENTEROCOLITICA  28-58 PYSCH_YERPS YSC OPERON PROTEIN H YERSINIA PSEUDOTUBERCULOSIS  28-58 PYSCI_YEREN YSC OPERON PROTEIN I YERSINIA ENTEROCOLITICA  49-76 PYSCI_YERPS YSC OPERON PROTEIN I YERSINIA PSEUDOTUBERCULOSIS  49-76 PYSCJ_YEREN YSC OPERON LIPOPROTEIN J YERSINIA ENTEROCOLITICA  99-126 PRECURSOR PYSCJ_YEREN YSC OPERON LIPOPROTEIN J YERSINIA PSEUDOTUBERCULOSIS  99-126 PRECURSOR PYSCL_YEREN YSC OPERON PROTEIN L YERSINIA ENTEROCOLITICA  41-68 PYSCL_YERPS YSC OPERON PROTEIN L YERSINIA PSEUDOTUBERCULOSIS  41-68 PYSMA_SERMA HYPOTHETICAL 9.5 KD SERRATIA MARCESCENS  11-70 PROTEIN PYSO2_DESAM HYPOTHETICAL 28.3 KD DESULFUROLOBUS AMBIVALENS  68-109 PROTEIN PYSO3_DESAM HYPOTHETICAL PROTEIN DESULFUROLOBUS AMBIVALENS  65-155 PYSP2_LEPIT HYPOTHETICAL PROTEIN LEPTOSPIRA INTERROGANS   6-33  60-94 PYSR1_MYCMY HYPOTHETICAL PROTEIN MYCOPLASMA MYCOIDES  35-99  185-227  300-327 PYSY3_BACSU HYPOTHETICAL 19.6 KD BACILLUS SUBTILIS  72-99 PROTEIN PYSYN_METFE HYPOTHETICAL PROTEIN METHANOTHERMUS FERVIDUS  78-105 PYT37_STRFR HYPOTHETICAL 37.1 KD STREPTOMYCES FRADIAE  246-273 PROTEIN PYTDK_BACSU HYPOTHETICAL 35.6 KD BACILLUS SUBTILIS  244-271  279-306 PROTEIN PYTRE_LEPBI HYPOTHETICAL 22 KD LEPTOSPIRA BIFLEXA  84-113 PROTEIN PYTRP_LACLA HYPOTHETICAL 13.3 KD LACTOCOCCUS LACTIS  76-112 PROTEIN PYTS1_BACSU HYPOTHETICAL 20 KD BACILLUS SUBTILIS  37-64 PROTEIN PYTSF_SPICI HYPOTHETICAL 23.8 KD SPIROPLASMA CITRI  102-149 PROTEIN PYX04_BACSU HYPOTHETICAL 12.8 KD BACILLUS SUBTILIS  37-64  68-95 PROTEIN PYX06_BACSU HYPOTHETICAL 21.0 KD BACILLUS SUBTILIS  142-169 PROTEIN PYX13_BACSU HYPOTHETICAL 26.0 KD BACILLUS SUBTILIS  17-51 PROTEIN PYX15_BACSU HYPOTHETICAL 61.8 KD BACILLUS SUBTILIS  165-207  262-289 PROTEIN PYX18_BACSU HYPOTHETICAL 66.8 KD BACILLUS SUBTILIS   3-30  34-61  94-142 PROTEIN PYX19_BACSU HYPOTHETICAL 31.3 KD BACILLUS SUBTILIS  56-83  85-112 PROTEIN PYX20_BACSU HYPOTHETICAL 23.2 KD BACILLUS SUBTILIS  24-58 PROTEIN PYX12_ANASP HYPOTHETICAL 18.9 KD ANABAENA SP  77-104 PROTEIN PYXYB_CALSA HYPOTHETICAL 10.7 KD CALDOCELLUM   9-39 PROTEIN SACCHAROLYTICUM PYXYC_CALSA HYPOTHETICAL PROTEIN CALDOCELLUM  41-94 SACCHAROLYTICUM PYZE_ECOLI HYPOTHETICAL 16.7 KD ESCHERICHIA COLI  41-78 PROTEIN

TABLE IX 107 × 174 × 4 SEARCH MOTIF RESULTS SUMMARY FOR ALL HUMAN PROTEINS PCGENE 107 × 178 × 4 Motif Search on All Human Protein Sequences FILE NAME PROTEIN AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 AREA 9 P143F_HUMAN 14-3-3 PROTEIN ETA (PROTEIN AS1) (FRAGMENT) 101-135 P143S_HUMAN 14-3-3 PROTEIN HOMOLOG STRATIFIN 45-72 P143T_HUMAN 14-3-3 PROTEIN THETA (14-3-3 PROTEIN T-CELL) (HS1 PROTEIN) 61-92 P143Z_HUMAN 14-3-3 PROTEIN ZETA (PROTEIN KINASE C INHIBITOR 28-55 PROTEIN-1) (KCIP-1) P1A23_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-114 A-29 (AW-19) A*2901 ALPHA CHAIN P1A24_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 A-29 (AW-19) A*2902 ALPHA CHAIN P1B02_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 B-7 B*0702 ALPHA CHAIN P1B05_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 148-182 B-13 B*1301 ALPHA CHAIN P1B10_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-75 (B-15) B*1502 ALPHA CHAIN P1B11_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 BW-72 (BW-70) B*1503 ALPHA P1B12_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  76-107 B-62 B*1504 ALPHA CHAIN P1B13_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-18 B*1801 ALPHA CHAIN P1B21_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3501 ALPHA CHAIN P1B22_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3502 ALPHA CHAIN P1B23_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3503 ALPHA CHAIN P1B24_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  76-107 B-35 B*3504 ALPHA CHAIN P1B25_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3505 ALPHA CHAIN P1B26_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3506 ALPHA CHAIN P1B27_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3507 ALPHA CHAIN P1B28_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3508 ALPHA CHAIN P1B29_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  88-115 B-37 B*3701 ALPHA CHAIN P1B32_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 B-39 B*3902 ALPHA CHAIN P1B33_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 60-91 BW-60 (B-40) B*4001 ALPHA CHAIN P1B34_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-40 B*4002 ALPHA CHAIN P1B35_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-40 B*4003 ALPHA CHAIN P1B36_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-40 B*4004 ALPHA CHAIN P1B38_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 BW-41 B*4101 ALPHA CHAIN P1B39_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-42 B*4201 ALPHA CHAIN P1B40_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-111 BW-44 (B-12) B*4401 ALPHA CHAIN P1B41_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-44 (B-12) B*4402 ALPHA CHAIN P1B42_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-44 (B-12) B*4403 ALPHA CHAIN P1B43_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 BW-45 (B-12) B*4501 ALPHA CHAIN P1B44_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-46 B*4601 ALPHA CHAIN P1B45_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  88-115 BW-47 B*4701 ALPHA CHAIN P1B46_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 BW-48 B*4801 ALPHA CHAIN P1B47_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-49 (B-21) B*4901 ALPHA CHAIN P1B48_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 BW-50 (B-21) B*5001 ALPHA CHAIN P1B53_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-52 (B-5) B*5201 ALPHA CHAIN P1B55_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-54 (BW-22) B*5401 ALPHA P1B56_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-55 (BW-22) B*5501 ALPHA P1B57_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-55 (BW-22) B*5502 ALPHA P1B58_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-56 (BW-22) B*5601 ALPHA P1B59_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-56 (BW-22) B*5602 ALPHA P1C01_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-1 CW*0101 ALPHA CHAIN P1C02_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-1 CW*0102 ALPHA CHAIN P1C03_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-2 CW*0201 ALPHA CHAIN P1C04_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-2 CW*0202 ALPHA CHAIN P1C06_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-3 CW*0302 ALPHA CHAIN P1C12_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-8 CW*0801 ALPHA CHAIN P1C13_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-8 CW*0802 ALPHA CHAIN P1C14_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-8 CW*0803 ALPHA CHAIN P1C17_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW*1401 ALPHA CHAIN PRECURSOR P25A6_HUMAN 69/71 KD (2′-5′) OLIGOADENYLATE 593-620 SYNTHETASE P2AAA_HUMAN PROTEIN PHOSPHATASE PP2A, 65 KD REGULATORY SUBUNIT, 12-49 54-81 ALPHA ISOFORM P2AAB_HUMAN PROTEIN PHOSPHATASE PP2A, 65 KD REGULATORY SUBUNIT,  9-36 41-68  79-106 BETA ISOFORM P2ABA_HUMAN PROTEIN PHOSPHATASE PP2A, 55 KD REGULATORY SUBUNIT, 177-218 ALPHA ISOFORM P411_HUMAN ERYTHROID PROTEIN 4.1 (BAND 4.1, ERTHROCYTE FORM) 32-66 P412_HUMAN NON-ERYTHROID PROTEIN 4.1 (BAND 4.1, LYMPHOID FORM)  3-30 708-735 P42_HUMAN ERYTHROCYTE MEMBRANE PROTEIN BAND 4.2 173-200 518-545 P4F2_HUMAN 4F2 CELL-SURFACE ANTIGEN HEAVY CHAIN (4F2HC) 281-322 (LYMPHOCYTE ACTIVATION P5H1E_HUMAN 5-HYDROXYTRYPTAMINE 1E RECEPTOR (5-HT-1E) (SEROTONIN 311-338 RECEPTOR) P5H1F_HUMAN 5-HYDROXYTRYPTAMINE 1F RECEPTOR (5-HT-1F) (SEROTONIN 222-253 RECEPTOR) P5H2A_HUMAN 5-HYDROXYTRYPTAMINE 2A RECEPTOR (5-HT-2A) (SEROTONIN 22-56 RECEPTOR) P5H7_HUMAN 5-HYDROXYTRYPTAMINE 7 RECEPTOR (5-HT-7) (5-HT-X) 72-99 (SEROTONIN RECEPTOR) PA1AC_HUMAN ALPHA-1-ANTICHYMORTYPSIN PRECURSOR (ACT)  98-132 330-357 PA1AG_HUMAN ALPHA-1-ACID GLYCOPROTEIN 1 PRECURSOR (OROSOMUCOID)  92-119 ((OMD) PA1AT_HUMAN ALPHA-1-ANTITRYPSIN PRECURSOR (ALPHA-1 PROTEASE 168-202 INHIBITOR) (ALPHA-1- PA1AU_HUMAN ALPHA-1-ANTITRYPSIN-REALATED PROTEIN PRECURSOR 163-197 PA2AP_HUMAN ALPHA-2-ANTIPLASMIN PRECURSOR (ALPHA-2-PLASMIN 191-218 365-395 INHIBITOR) (ALPHA-2- PA2GL_HUMAN LEUCINE-RICH ALPHA-2-GLYCOPROTEIN (LRG) 104-134 PA2MG_HUMAN ALPHA-2-MACROGLOBULIN PRECURSOR (ALPHA-2-M) 53-80 319-349 1085-1112 1402-1429 PA4_HUMAN ALZHIMER'S DESEASE AMYLOID A4 PROTEIN PRECURSOR 428-455 (PROTEASE NEXIN-11) PAACT_HUMAN ALPHA-ACTININ (F-ACTIN CROSS LINKING PROTEIN)  92-119 720-747 PAATM_HUMAN ASPARTATE AMINOTRANSFERASE, MITOCHONDRIAL 109-136 PRECURSOR (EC 2.6.1.1) PABP2_HUMAN ENDOTHELIAL ACTIN-BINDING PROTEIN (ABP-280) 61-88 119-147 2604-2633 (NONMUSCLE FILAMIN) PAC12_HUMAN ACTIVATOR 1 37 KD SUBUNIT (REPLICATION FACTOR C 37 306-333 KD SUBUNIT) (A1 PAC15_HUMAN ACTIVATOR 1 140 KD SUBUNIT (REPLICATION FACTOR C 14-51 182-209 668-700 LARGE SUBUNIT) (A1 PACDL_HUMAN ACYL-COA DEHYDROGENASE PRECURSOR, LONG-CHAIN  78-108 179-206 313-340 SPECIFIC (EC 1.3.99.13) PACET_HUMAN ANGIOTENSIN-CONVERTING ENZYME PRECURSOR, TESTIS-  78-115 126-153 676-710 SPECIFIC (EC 3.4.15.1) PACE_HUMAN ANGIOTENSIN-CONVERTING ENZYME PRECURSOR, SOMATIC 652-689 700-727 1250-1284 (EC 3.4.15.1) (ACE) PACHA_HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN 48-80 PRECURSOR PACHE_HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, EPSILON CHAIN 46-98 PRECURSOR PACHG_HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, GAMMA CHAIN 45-79 304-331 PRECURSOR PACHP_HUMAN NEURONAL ACETYLCHOLINE RECEPTOR PROTEIN, BETA-4 29-56 70-97 CHAIN (FRAGMENT) PACRO_HUMAN ACROSIN PRECURSOR (EC 3.4.21.10) 112-149 PACYM_HUMAN ACYLPHOSPHATASE, MUSCLE TYPE ISOZYME (EC 3.6.1.7) 26-53 (ACYLPHOSPHATE PADT2_HUMAN ADP,ATP CARRIER PROTEIN, FIBROBLAST ISOFORM 162-189 (ADP/ATP TRANSLOCASE 2) PADT3_HUMAN ADP,ATP CARRIER PROTEIN, LIVER ISOFORM T2 (ADP/ATP 163-190 TRANSLOCASE 3) PAK79_HUMAN A-KINASE ANCHOR PROTEIN 79 (AKAP 79) (CAMP-DEPENDENT 197-238 381-414 PROTEIN KINASE PALFA_HUMAN FRUCTOSE-BISPHOSPHATE ALDOLASE (EC 4.1.2.13) A 36-63 (MUSCLE) PALFB_HUMAN FRUCTOSE-BISPHOSPHATE ALDOLASE (EC 4.1.2.13) B  79-113 (LIVER) PAMD1_HUMAN AMP DEAMINASE 1 (EC 3.5.4.6) (MYOADENYLATE 59-86 DEAMINASE) (AMP DEAMINASE PAMD3_HUMAN AMP DEAMINASE 3 (EC 3.5.4.6) (AMP DEAMINASE 49-76 ISOFORM E) PAMPN_HUMAN AMINOPEPTIDASE N (EC 3.4.11.2) (MICROSOMAL 492-523 604-648 926-964 AMINOPEPTIDASE) (GP150) PAMPR_HUMAN AMPHIRGEULIN PRECURSOR (AR) 213-247 PAMRP_HUMAN ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED PROTEIN 173-236 263-290 PRECURSOR PANFB_HUMAN BRAIN NATRIURETIC PEPTIDE PRECURSOR 36-63 PANK1_HUMAN ANKYRIN R (ANKYRINS 2.1 AND 2.2) (ERYTHROCYTE 812-839 1004-1031 1617-1644 ANKYRIN) PANKB_HUMAN ANKYRIN, BRAIN VARIANT 1 (ANKYRIN B) (ANKYRIN, 1544-1571 NONERYTHROID) PANKC_HUMAN ANKYRIN, BRAIN VARIANT 2 (ANKYRIN B) (ANKYRIN, 1811-1838 NONERYTHROID) PANPA_HUMAN ATRIAL NATRIURETIC PEPTIDE RECEPTOR A PRECURSOR 553-580 825-852 (ANP-A) (ANPRA) (GC-A) PANPB_HUMAN ATRIAL NATRIURETIC PEPTIDE RECEPTOR B PRECURSOR 810-837 (ANP-B) (ANPRA) (GC-B) PANT3_HUMAN ANTITHROMBIN-III PRECURSOR (ATIII) 162-196 PANX2_HUMAN ANNEXIN II (LIPOCORTIN II) (CALPACTIN I HEAVY 40-67 306-333 CHAIN) (CHROMOBINDIN 8) PANX3_HUMAN ANNEXIN III (LIPOCORTIN III) (PLACENTAL 215-242 ANTICOAGULANT PROTEIN III) PANX6_HUMAN ANNEXIN VI (LIPOCORTIN VI) (P68) (P70) (PROTEIN 60-87 626-653 III) (CHROMOBINDIN 20) PANXI_HUMAN ANNEXIN, INTESTIN-SPECIFIC (ISA) 37-78 137-164 PAOFA_HUMAN AMINE OXIDASE (FLAVIN-CONTAINING) A (EC 1.4.3.4) 16-43  74-104 (MONOAMINE OXIDASE) PAOFB_HUMAN AMINE OXIDASE (FLAVIN-CONTAINING) B (EC 1.4.3.4) 68-95 (MONOAMINE OXIDASE) PAPA1_HUMAN APOLIPOPROTEIN A-I PRECURSOR (APO-AI) 57-84 PAPB_HUMAN APOLIPOPROTEIN B-100 PRECURSOR (APO B-100/APO B-48) 585-619 1073-1100 1353-1380 1524-1584 2074-2113 2132-2159 2181-2215 2240-2271 2360-2389 2466-2507 2529-2559 2850-3000 3360-3390 3480-3570 3620-3654 4040-4074 4090-4120 4135-4167 4247-4301 4397-4438 4465-4492 4499-4544 PAPC2_HUMAN APOLIPOPROTEIN C-II PRECURSOR (APO-CII) 36-63 PAPC_HUMAN ADENOMATOUS POLYPOSIS COLI PROTEIN (APC PROTEIN) 145-172 617-651 247-274 834-861 1795-1822 2172-2212 2572-2609 PAPE_HUMAN APOLIPOPROTEIN E PRECURSOR (APO-E) 48-81 PAPOA_HUMAN APOLIPOPROTEIN (A) PRECURSOR (EC 3.4.21.-) 4448-4475 (APO (A)) (LP (A) ) PAQP1_HUMAN AQUAPORIN-CHIP (WATER CHANNEL PROTEIN FOR RED BLOOD 39-73 CELLS AND KIDNEY PARK1_HUMAN BETA-ADRENERGIC RECEPTOR KINASE 1 (EC 2.7.1.126) 523-553 (BETA-ARK-1) PARLY_HUMAN ARGININOSUCCINATE LYASE (EC 4.3.2.1)  69-103 (ARGINOSUCCINASE) PARNT_HUMAN ARYL HYDROCARBON RECEPTOR NUCLEAR TRANSLOCATOR 223-250 (ARNT PROTEIN) (DIO PARRC_HUMAN BETA-ARRESTIN 2 215-242 305-332 PARRS_HUMAN ARRESTIN (RETINAL S-ANTIGEN) (48 KD PROTEIN) (S-AG) 299-352 PARY1_HUMAN ARYLAMINE N-ACETYL TRANSFERASE, MONOMORPHIC  7-34 (EC 2.3.1.5) (MNAT) PARY2_HUMAN ARYLAMINE N-ACETYLTRANSFERASE, POLYMORPHIC  7-34 (EC 2.3.1.5) (PNAT) PASNS_HUMAN ASPARAGINE SYNTHETASE (GLUTAMINE-HYDROLYZING) 311-338 347-374 (EC 6.3.5.4) (TS11 CELL PATCD_HUMAN CALCIUM-TRANSPORTING ATPASE SARCOPLASMIC RETICULUM 163-190 TYPE (EC 3.6.1.38) PATCE_HUMAN CALCIUM-TRANSPORTING ATPASE ENDOPLASMIC RETICULUM 163-190 TYPE (EC 3.6.1.38) PATF1_HUMAN TRANSCRIPTION FACTOR ATF-1 (FRAGMENT) 203-230 PATF3_HUMAN TRANSCRIPTION FACTOR ATF-3 (FRAGMENT) 155-183 PATF5_HUMAN TRANSCRIPTION FACTOR ATF-5 (FRAGMENT) 30-61 PATF6_HUMAN TRANSCRIPTION FACTOR ATF-6 (FRAGMENT) 34-68 PATFA_HUMAN TRANSCRIPTION FACTOR ATF-A AND AFTA-DELTA 351-394 PATPF_HUMAN ATP SYNTHASE B CHAIN, MITOCHONDRIAL PRECURSOR 129-163 (EC 3.6.1.34) PB232_HUMAN NUCLEOLAR PHOSPHOPROTEIN B23 (NUCLEOPHOSMIN) 114-141 (NUMATRIN) PB2AR_HUMAN BETA-2-ADRENERGIC RECEPTOR 292-319 345-372 PB3A2_HUMAN ANION EXCHANGE PROTEIN 2 (NON-ERYTHROID BAND 1081-1111 3-LIKE PROTEIN) (BND3L) PB94_HUMAN B94 PROTEIN 115-142 525-562 609-636 PBAN7_HUMAN ERYTHROCYTE BAND 7 INTEGRAL MEMBRANE PROTEIN 106-140 PBASO_HUMAN BASONUCLIN 120-147 310-337 773-807 PBC2B_HUMAN TRANSFORMING PROTEIN BCL-2-BETA 178-205 PBCGF_HUMAN B-CELL GROWTH FACTOR PRECURSOR (BCGF-12 KD) 33-63 PBCR_HUMAN BREAKPOINT CLUSTER REGION PROTEIN 784-825 PBGLR_HUMAN BETA-GLUCURONIDASE PRECURSOR (EC 3.2.1.31) 246-280 504-531 PBMP2_HUMAN BONE MORPHOGENETIC PROTEIN 2 PRECURSOR (BMP-2) 216-250 (BMP-2A) PBMP5_HUMAN BONE MORPHOGENETIC PROTEIN 5 PRECURSOR (BMP-5) 202-229 PBMP6_HUMAN BONE MORPHOGENETIC PROTEIN 6 PRECURSOR (BMP-6) 274-301 BPMP7_HUMAN BONE MORPHOGENETIC PROTEIN 7 PRECURSOR (BMP-7) 192-219 (OSTEOENIC PROTEIN 1) PBN51_HUMAN BN51 PROTEIN 284-311 PBPI_HUMAN BACTERICIDAL PERMEABILITY INCREASING PROTEIN 168-195 PRECURSOR (BPI) (CAP 57) PBRS3_HUMAN BOMBESIN RECEPTOR SUBTYPE-3 (BRS-3) 10-37 BPTF2_HUMAN BASIC TRANSCRIPTION FACTOR 62 KD SUBUNIT (P62) 128-162 353-385 PBTG1_HUMAN BTG1 PROTEIN (B-CELL TRANSLOCATION GENE 1 PROTEIN) 26-53 PC1TC_HUMAN C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC 330-363 (METHYLENETETRAYDROFO PC2TA_HUMAN MHC CLASS II TRANSACTIVATOR CIITA 921-948 PCA19_HUMAN COLLAGEN ALPHA 1 (IX) CHAIN PRECURSOR 120-150 PCA1B_HUMAN COLLAGEN ALPHA 1 (IX) CHAIN PRECURSOR 341-368 PCABV_HUMAN CALBINDIN (VITAMIN D-DEPENDENT CALCIUM-BINDING 27-54 PROTEIN (CABP), AVIAN- PCAD5_HUMAN CADHERIN 5 PRECURSOR (7B4 ANTIGEN) 723-750 PCADE_HUMAN EPITHELIAL-CADHERIN PRECURSOR (E-CADHERIN) 838-865 (UVOMORULIN) (CAM 120/80) PCADN_HUMAN NEURAL-CADHERIN PRECURSOR (N-CADHERIN)  95-122 323-350 PCADP_HUMAN PLACENTAL-CADHERIN PRECURSOR (P-CADHERIN) 384-411 580-607 PCAGA_HUMAN CALGRANULIN A (MIGRATION INHBITORY FACTOR-RELATED  2-29 PROTEIN 8) (MRP-8) PCALR_HUMAN CALCITONIN RECEPTOR PRECURSOR (CT-R) 140-167 PCAMA_HUMAN CARTLIAGE MATRIX PROTEIN PRECURSOR 297-324 467-494 PCAP1_HUMAN CALPAIN 1, LARGE (CATALYTIC) SUBUNIT (EC 3.4.22.17) 561-588 (CALCIUM-ACTIVATED PCAP2_HUMAN CALPAIN 2, LARGE (CATALYTIC) SUBUNIT (EC 3.4.22.17) 257-284 502-529 (CALCIUM-ACTIVATED PCAP3_HUMAN CALPAIN P94, LARGE (CATALYTIC) SUBUNIT (EC 3.4.22.17) 674-701 (CALCIUM- PCAPL_HUMAN PLACENTAL CALCIUM-BINDING PROTEIN 13-40 PCAP_HUMAN ADENYLYL CYCLASE-ASSOCIATED PROTEIN (CAP) 111-138 163-197 321-355 PCART_HUMAN CALRETININ (29 KD CALBINDIN) 217-244 PCASB_HUMAN BETA CASIN PRECURSOR 14-48 PCATA_HUMAN CATALASE (EC 1.11.1.6) 422-456 PCATD_HUMAN CATHEPSIN D PRECURSOR (EC 3.4.23.5) 253-282 PCATH_HUMAN CATHEPSIN H PRECURSOR (EC 3.4.22.16) 41-68 PCATL_HUMAN CATHEPSIN L PRECURSOR (EC 3.4.22.15) (MAJOR 278-305 EXCRETED PROTEIN) (MEP) PCATS_HUMAN CATHEPSIN S PRECURSOR (EC 3.4.22.27) 30-57 142-169 PCBFB_HUMAN CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT B (CBF-B) 24-58 138-165 (NF-Y PROTEIN PCBG_HUMAN CORTICOSTEROID-BINDING GLOBINULIN PRECURSOR (CBG) 88-122 (TRANSCORTIN) PCBPB_HUMAN CARBOXYPEPTIDASE B PRECURSOR (EC 3.4.17.2)  69-129 278-305 319-346 (PARCREAS-SPECIFIC PROTEIN) PCBPH_HUMAN CARBOXYPEPTIDASE H PRECURSOR (EC 3.4.17.10) 355-382 (CARBOXYPEPTIDASE E) (CPE) PCC21_HUMAN CDC21 HOMOLOG (P1-CDC21) (FRAGMENT) 35-62 PCC27_HUMAN PROTEIN CDC27HS 209-240 PCCG1_HUMAN TRANSCRIPTION INITIATION FACTOR TFIID 250 KD 1298-1342 SUBUNIT (TBP-ASSOCIATED PCE14_HUMAN MONOCYTE DIFFERENTIATION ANTIGEN CD14 PRECURSOR 142-169 (MYELOID CELL-SPECIFI PCD1A_HUMAN T-CELL SURFACE CLYCOPROTEIN CDIA PRECURSOR (CDIA 32-63 281-308 ANTIGEN) (T-CELL PCD1E_HUMAN T-CELL SURFACE CLYCOPROTEIN CDIE PRECURSOR (CDIE  71-104 ANTIGEN) (R2G1) PCD20_HUMAN B-LYMPHOCYTE ANTIGEN CD20 (B-LYMPHOCYTE SURFACE 226-255 ANTIGEN B1) (LEU-16) PCD24_HUMAN CD20 RECEPTOR PRECURSOR 226-255 PCD2_HUMAN T-CELL SURFACE ANTIGEN CD2 PRECURSOR (T-CELL SURFACE  88-19 ANTIGEN PCD34_HUMAN HEMOPOIETIC PROGENITOR CELL ANTIGEN CD34 PRECURSOR  74-108 PCD37_HUMAN LEUKOCYTE ANTIEN CD37 101-128 PCD3G_HUMAN T-CELL SURFACE GLYCOPROTEIN CD3 GAMMA CHAIN  7-34 PRECURSOR (T-CELL RECEPT PCD3L_HUMAN CD30 LIGAND (CD30-L)  96-130 183-217 PCD4X_HUMAN CD44 ANTIGEN, EPITHELIAL FORM PRECURSOR (CD44E) 328-355 (PHAGOCYTIC PCD4_HUMAN T-CELL SURFACE GLYCOPROTEIN CD4 PRECURSOR (T-CELL 44-71 240-267 SURFACE ANTIGEN PCD53_HUMAN LEUKOCYTE SURFACE ANTIGEN CD53  87-114 PCD72_HUMAN B-CELL DIFFERENTIATION ANTIGEN CD72 (LYB-2) 118-177 PCDK3_HUMAN CELL DIVISION PROTEIN KINASE 3 (EC 2.7.1.-)  5—32 PCDK5_HUMAN CELL DIVISION PROTEIN KINASE 5 (EC 2.7.1.-) (KINASE  5—32 PSSALRE) PCEBB_HUMAN CCAA/ENHANCER BINDING PROTEIN BETA (C/EBP BETA) 296-330 (NUCLEAR FACTOR PCENB_HUMAN MAJOR CENTROMERE AUTOANTIGEN B (CENTROMERE 568-595 PROTEIN B) (CENP-B) PCENC_HUMAN CENTROMERE PROTEIN C (CENP-C) (CENTROMERE 433-460 AUTOANTIGEN C) PCENE_HUMAN CENTROMERIC PROTEIN E (CENP-E PROTEIN) 372-399 493-520 553-607 715-752 767-825 850-884 903-947 963-995 1080-1107 1122-1149 1179-1239 1250-1277 1340-1367 1440-1481 1486-1556 1646-1680 1684-1724 1808-1846 1852-1883 1890-1917 1940-1988 2021-2048 2288-2318 2440-2478 2498-2563 PCERU_HUMAN CERULOPLASMIN PRECURSOR (EC 1.16.3.1) (FERROXIDASE) 913-940 PCETP_HUMAN CHOLESTERYL ESTER TRANSFER PROTEIN PRECURSOR  71-108 PCFTR_HUMAN CYSTIC FIBROSIS TRANASMEMBRANE CONDUCTANCE 158-189 803-922 1243-1270 REGULATOR (CFTR) PCGCC_HUMAN CGMP-GATED CATION CHANNEL PROTEIN (CYCLIC NUCLEOTIDE 216-243 PCGL_HUMAN CYSTATHIONINE GAMMA-LYASE (EC 4.4.1.1) 315-349 PCHLR_HUMAN CHLORDECONE REDUCTASE (EC 1.1.1.225) (CDR) 17-51 PCHOL_HUMAN CHOROIDERAEMIA-LIKE PROTEIN 56-97 230-257 451-478 PCHOR_HUMAN CHOROIDERAMIA PROTEIN (TCD PROTEIN) 112-139 PCINA_HUMAN SODIUM CHANNEL PROTEIN, CARDIAC AND SKELETAL MUSCLE 787-814 943-970 ALPHA-SUBUNIT PCLCA_HUMAN CLATHRIN LIGHT CHAIN A (BRAIN AND LYMPHOCYTE LCA) 121-148 PCLCB_HUMAN CLATHRIN LIGHT CHAIN B (BRAIN AND LYMPHOCYTE LCB) 123-157 PCLCY_HUMAN CALCYCLIN (PROLACTIN RECEPTOR ASSOCIATED PROTEIN)  9-50 (PRA) (GROWTH PCLUS_HUMAN CLUSTERIN PRECURSOR (COMPLEMENT-ASSOCIATED PROTEIN 36-98 323-350 367-394 SP-40,40) PCMGA_HUMAN CHROMOGRANIN A PRECURSOR (CGA) (CONTAINS:  93-120 430-457 PANCREASTATIN AND WE-14) PCNTF_HUMAN CILIARY NEUROTROPHIC FACTOR (CNTF) 66-93 PCO02_HUMAN TUMOR-ASSOCIATED ANTIGEN CO-029 29-56  95-148 PCO3_HUMAN COMPLEMENT C3 PRECURSOR 242-276 593-620 837-867 PCO4_HUMAN COMPLEMENT C4 PRECURSOR 1292-1319 PCO5_HUMAN COMPLEMENT C5 PRECURSOR 298-342 537-564 970-997 1270-1304 PCO6_HUMAN COMPLEMENT C6 PRECURSOR 367-398 PCO7_HUMAN COMPLEMENT C7 PRECURSOR 225-261 PCOXI_HUMAN CYTOCHROME C OXIDASE POLYPEPTIDE I (EC 1.9.3.1) 353-380 PCP70_HUMAN CYTOCHROME P450 VII (CHOLESTEROL 7-ALPHA- 263-290 346-373 MONOOXYGENASE) PCPCH_HUMAN CYTOCHROME P450 IIC17 (EC 1.14.14.1) (P450-254C) 109-136 (FRAGMENT) PCPE1_HUMAN CYTOCHROME P450 IIE1 (EC 1.14.14.1) (P450-J) 231-258 (ETHANOL INDUCIBLE) PCPSM_HUMAN CARBAMOYL-PHOSPHATE SYNTHASE (AMMONIA) 112-146 420-447 MITOCHONDRIAL PRECURSOR PCPT2_HUMAN MITOCHONDRIAL CARNITINE PALMITOYLTRANSFERASE II 410-437 PRECURSOR PCPT7_HUMAN CYTOCHROME P450 XVIIA1 (P450-C17) (EC 1.14.99.9) 226-257 (STERIOD 17-ALPHA- PCPV1_HUMAN CYTOCHROME P450 XIXA1 (AROMATASE) (EC 1.14.14.1) 234-271 (ESTROGEN PCR2_HUMAN COMPLEMENT RECEPTOR TYPE 2 PRECURSOR (CR2)  986-1013 (COMPLEMENT C3D RECEPTOR) PCRCM_HUMAN COLORECTAL MUTANT CANCER PROTEIN (MCC PROTEIN)  68-126 379-420 633-678 724-754 763-790 PCREB_HUMAN CAMP RESPONSE ELEMENT BINDING PROTEINS A AND B  94-125 (CREB-1 AND CREB-B) PCREP_HUMAN CAMP RESPONSE ELEMENT BINDING PROTEIN CRE-BP1 380-414 PCRP_HUMAN C-REACTIVE PROTEIN PRECURSOR 60-87 150-177 PCS1_HUMAN CLEAVAGE SIGNAL-1 PROTEIN (CS-1) 203-233 PCSF1_HUMAN MICROPHAGE COLONY STIMULATING FACTOR-1 PRECURSOR 143-170 (CSF-1) (MCSF) PCST3_HUMAN CLEAVAGE STIMULATION FACTOR, 50 KD SUBUNIT (CSTF 50  6-33 KD SUBUNIT) (CF-1 PCTNA_HUMAN ALPHA-CATENIN (CADHERIN-ASSOCIATED PROTEIN) 681-718 PCTNR_HUMAN ALPHA-CATENIN RELATED PROTEIN (CATENIN ALPHA-2) 680-717 PCX26_HUMAN GAP JUNCTION BETA-2 PROTEIN (CONNEXIN 26) (CX26) 108-139 PCS32_HUMAN GAP JUNCTION BETA-1 PROTEIN (CONNEXIN 32) (CX32) 117-144 (GAP JUNCTION 28 KD PCX37_HUMAN GAP JUNCTION ALPHA-4 PROTEIN (CONNEXIN 37) (CX37)  88-115 PCYB5_HUMAN CYTOCHROME B5  3-42 PCYG1_HUMAN GUANYLATE CYCLASE SOLUBLE, BETA-1 CHAIN (EC 4.6.1.2)  80-107 126-153 352-396 (70 KD CHAIN) PCYG4_HUMAN GUANYLATE CYCLASE SOLUBLE, ALPHA-4 CHAIN (EC 4.6.1.2) 106-133 PCYGR_HUMAN RETINAL GUANYLYL CYCLASE PRECURSOR (EC 4.6.1.2) 824-851 PCYRG_HUMAN CYTOKINE RECEPTOR COMMON GAMMA CHAIN PRECURSOR 293-320 (GAMMA-C) PCYTA_HUMAN CYSTATIN A (STEFIN A) (CYSTATIN AS) 27-58 PDBL_HUMAN PROTO-ONCOGENE DBL PRECURSOR (CONTAINS: MCF2) 233-283 485-524 766-793 801-845 PDESM_HUMAN DESMIN 153-180 272-312 PDESP_HUMAN DESMOPLAKIN I AND II (DPI AND DPII) (FRAGMENT) 31-79 113-143 217-244 269-317 382-434 437-467 528-558 563-598 630-674 697-734 738-789 1456-1493 1508-1535 PDHAP_HUMAN ALDEHYDE DEHYDROGENASE, DIMERIC NADP-PREFERRING 31-58 (EC 1.2.1.5) PDMD_HUMAN DYSTROPHIN  86-116 338-365 484-511 753-780  976-1003 1012-1228 1201-1228 1364-1394 1615-1674 1838-1865 2158-2185 2313-2343 2752-2779 2786-2830 2912-2958 3014-3041 3499-3533 PDNJI_HUMAN DNAJ PROTEIN HOMOLOG 45-76 PDNLI_HUMAN DNA LIGASE I (EC 6.5.1.1) (POLYDEOXYRIBONUCLEOTIDE 130-157 355-392 732-759 SYNTHASE (ATP) PDPOA_HUMAN DNA POLYMERASE ALPHA (EC 2.7.7.7) 25-74 1009-1057 1100-1127 PDPOD_HUMAN DNA POLYMERASE DELTA CATALYTIC CHAIN (EC 2.7.7.7) 729-756 PDPP4_HUMAN DIPDPTIDYL PEPTIDASE IV (EC 3.4.14.5) (DPP IV) 29-77 114-148 (T-CELL ACTIVATION PDRN1_HUMAN DEOXYRIBONCULEASE I PRECURSOR (EC 3.1.21.1) 44-71 (DNASE I) PDSC2_HUMAN DESMOCOLLIN 3A/3B PRECURSOR (DESMOSOMAL  80 107 355-398 GLYCOPROTEIN II AND III) PDSG1_HUMAN DESMOGLEIN 1 PRECURSOR (DESMOSOMAL GLYCOPROTEIN 1) 15-42 271-298 497-531 (DG1) PDSG3_HUMAN DEXMOGLEIN 3 PRECURSOR (130 KD PEMPHIGUS VULGARIS 211-248 325-352 ANTIGEN) (PVA) PDUG_HUMAN DIVERENT UPSTREAM PROTEIN (DUP) 584-618 PEAR1_HUMAN V-ERBA RELATED PROTEIN EAR-1 523-550 PEB12_HUMAN EBV-INDUCED G PROTEIN-COUPLED RECEPTOR 2 (EBI2) 44-78 PEF1B_HUMAN ELONGATION FACTOR 1-BETA (EF-1-BETA) 105-132 PEF1D_HUMAN ELONGATION FACTOR 1-DELTA (EF-1-DELTA)  84-118 PEGFR_HUMAN EPIDERMAL GROWTH FACTOR RECEPTOR PRECURSOR 64-91 440-467 (EC 2.7.1.112) PEGF_HUMAN EPIDERMAL GROWTH FACTOR PRECURSOR, KIDNEY (EGF) 47-74 (UROGASTRONE) PELF1_HUMAN ETS-RELATED TRANSCRIPTION FACTOR ELF-1 551-588 PENPL_HUMAN ENDOPLASMIN PRECURSOR (94 KD GLUCOSE-REGULATED 47-74 246-273 PROTEIN) (GRP94) (GP96 PENV1_HUMAN RETROVIRUS-RELATED ENV POLYPROTEIN 382-420 PEPC_HUMAN IG EPSILON CHAIN C REGION 161-188 PEPMO_HUMAN EPIMORPHIN 35-62 67-94 249-283 PER72_HUMAN PROTEIN DISULFIDE ISOMERASE-RELATED PRECURSOR 58-85 142-169 458-485 (ERP72) PERC1_HUMAN DNA EXCISION REPAIR PROTEIN ERCC-1 240-270 PERC6_HUMAN EXCISION REPAIR PROTEIN ERCC-6 160-209 939-973 PERTR_HUMAN ESTROGEN RECEPTOR (ER) 451-488 PET2_HUMAN ENDOTHELIN-2 PRECURSOR (ET-2) 133-160 PET3_HUMAN ENDOTHELIN-3 PRECURSOR (ET-3) 182-209 PEV2A_HUMAN EVI2A PROTEIN PRECURSOR 29-56 PEZRI_HUMAN EZRIN (P81) (CYTOVILLIN) (VILLIN-2) 119-146 351-392 402-429 512-539 PFA5_HUMAN COAGULATION FACTOR V PRECURSOR 2103-2137 PFA8_HUMAN COAGULATION FACTOR VIII PRECURSOR (PROCOAGULANT 871-908 1007-1034 1194-1230 COMPONENT) PFA9_HUMAN COAGULATION FACTOR IX PRECURSOR (EC 3.4.21.22) 271-298 (CHRISTMAS FACTOR) PFABI_HUMAN FATTY ACID-BINDING PROTEIN, INTESTINAL  98-125 PFASA_HUMAN APOPTOSIS-MEDIATING SURFACE ANTIGEN FAS PRECURSOR 23-50 249-301 306-333 (APO-1 ANTIGEN) PFCE2_HUMAN LOW AFFINITY IMMUNOGLOBULIN EPSILON FC RECEPTOR  81 115 (LYMPHOCYTE IGE PFCEA_HUMAN HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA 140-174 SUBUNIT (FCERI) PFIBA_HUMAN FIBRINOGEN ALPHA CHAIN PRECURSOR 131-165 427-457 PFIBB_HUMAN FIBRINOGEN BETA CHAIN PRECURSOR 149-186 PFIBG_HUMAN FIBRINOGEN GAMMA-A CHAIN PRECURSOR 59-93 125-160 PFIBH_HUMAN FIBRINOGEN GAMMA-G CHAIN (FIBRINOGEN GAMMA′) 59-93 125-160 PFINC_HUMAN FIBRONECTIN PRECURSOR 2168-2199 PFLI1_HUMAN FLI-1 ONCOGENE (ERGB TRANSCRIPTION FACTOR) 172-209 PFMO3_HUMAN DIMETHYLANILINE MONOOXYGENASE (N-OXIDE FORMING) 3 184-218 256-283 301-328 (EC 1.14.13.8) PFOS_HUMAN P55-FOS PROTO-ONCOGENE PROTEIN 162-193 PFRA1_HUMAN FOS-RELATED ANTIGEN 1 133-168 PFRA2_HUMAN FOS-RELATED ANTIGEN 2 149-180 PFRIH_HUMAN FERRITIN HEAVY CHAIN  7-34 PFRIL_HUMAN FERRITIN LIGHT CHAIN  3-33 PFSHR_HUMAN FOLLICLE STIMULATING HORMONE RECEPTOR PRECURSOR 364-395 (FSH-R) PFUCO_HUMAN TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (EC 3.2.1.51) 308-335 (ALPHA-L-FUCOSIDASE PFUMH_HUMAN FUMARATE HYDRATASE, MITOCHONDRIAL (EC 4.2.1.2) 424-451 (FUMARASE) PG0S2_HUMAN PUTATIVE LYMPHOCYTE G0/G1 SWITCH PROTEIN 56-83 PG19P_HUMAN PROTEIN KINASE C SUBSTRATE, 80 KD PROTEIN, HEAVY 146-173 CHAIN (PKCSH) PG6PI_HUMAN GLUCOSE-6-PHOSPHATE ISOMERASE (GPI) (EC 5.3.1.9) 16-50 (PHOSPHOGLUCOSE PG732_HUMAN MAJOR GASTROINTESTINAL TUMOR-ASSOCIATED PROTEIN 181-215 GA733-2 PRECURSOR PGA12_HUMAN GALACTOKINASE 2 (EC 2.7.1.6) 254-281 PGAA1_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-1 SUBUNIT 210-237 PRECURSOR (GABA(A) PGAA3_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-3 SUBUNIT 211-255 PRECURSOR (GABA(A) PGASR_HUMAN GASTRIN/CHOLECYSTOKININ TYPE B RECEPTOR (CCK-B  75-105 RECEPTOR) PGB01_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(O), ALPHA 22-49 SUBUNIT 1 PGB02_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(O), ALPHA 22-49 SUBUNIT 2 PGBAK_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(K), ALPHA 22-49 SUBUNIT (G(I) ALPHA-3) PGBAS_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(S), ALPHA  7-34 SUBUNIT (ADENYLATE PGBAY_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(Y), ALPHA  95-122 SUBUNIT (ALPHA-11) PGBB3_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(T) 65-92 BETA SUBUNIT 3 PGBLP_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN BETA 110-137 255-282 289-316 SUBUNIT-LIKE PROTEIN 12.3 PGBP2_HUMAN INTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 2 454-488 (GUANINE NUCLEOTIDE- PGBT2_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(T), ALPHA-2 22-49 SUBUNIT (TRANSDUCIN PGCF_HUMAN GC-RICH SEQUENCE DNA-BINDING FACTOR (GCF) 200-227 293-320 367-394 396-423 647-674 (TRANSCRIPTION FACTOR 9) PGCH1_HUMAN GTP CYCLOHYDROLASE I (EC 3.5.4.16) 165-192 PGCRA_HUMAN GLUCOCORTICOID RECEPTOR, ALPHA (GR) 167-194 PGCRB_HUMAN GLUCOCORTICOID RECEPTOR, BETA (GR) 167-194 PGCSP_HUMAN GLYCINE DEHYDROGENASE (DECARBOXYLATING) PRECURSOR 460-487 (EC 1.4.4.2) PGDN_HUMAN GLIA DERIVED NEXIN (GDN) (PROTEASE NEXTIN I)  83-110 PGELS_HUMAN GELSOLIN PRECURSOR, PLASMA (ACTIN-DEPOLYMERIZING 701-728 FACTOR) (ADF) PGFAP_HUMAN GLIAL FIBRILLARY ACIDIC PROTEIN, ASTROCYTE 189-216 349-376 384-411 PGL6S_HUMAN N-ACETYLGLUCOSAMINE-6-SULFATASE PRECURSOR 170-220 (EC 3.1.6.14) (G6S) PGLPK_HUMAN GLYCEROL KINASE (EC 2.7.1.30) (APT: GLYCEROL  78-112 251-278 3-PHOSPHOTRANSFERASE) PGLY1_HUMAN SERINE HYDROXYMETHYLTRANSFERASE, CYTOSOLIC 32-59 344—371 (EC 2.1.2.1) (SERINE PGLY2_HUMAN SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL 417-444 (EC 2.1.2.1) (SERINE PGR78_HUMAN 78 KD GLUCOSE REGULATED PROTEIN PRECURSOR (GRP 78) 564-591 598-625 (IMMUNOGLOBULIN PGRA2_HUMAN GLYCINE RECEPTOR ALPHA-2 CHAIN PRECURSOR 142-169 341-368 PGRAV_HUMAN GRAVIN (FRAGMENT)  9-43 61-88 PGRFR_HUMAN GROWTH HORMONE-RELEASING HORMONE RECEPTOR 128-155 PRECURSOR (GHRH RECEPT PGTH2_HUMAN GLUTATHIONE S-TRANSFERASE HA SUBUNIT 2 64-91 (EC 2.5.1.18) (GTH2) (CLASS- PGTPA_HUMAN GTPASE-ACTIVATING PROTEIN (GAP) (RAS P21 PROTEIN 474-501 1012-1047 ACTIVATOR) PGTR1_HUMAN GLUCOSE TRANSPORTER TYPE 1, ERYTHROCYTE/BRAIN 274-301 PGTR3_HUMAN GLUCOSE TRANSPORTER TYPE 3, BRAIN 272-299 PGTR4_HUMAN GLUCOSE TRANSPORTER TYPE 4, INSULIN-RESPONSIVE 290-317 PH10_HUMAN ISTONE H1′ 44-89 PH1A_HUMAN HISTONE H1A (H1.1)  73-104 PH1B_HUMAN HISTONE H1B (H1.4)  70-101 PH1C_HUMAN HISTONE H1C (H1.3)  71-102 PH1D_HUMAN HISTONE H1D (H1.2)  70-101 PH1T_HUMAN HISTONE H1T  74-105 PH2B0_HUMAN HISTONE H2B.1 20-47 PH2B2_HUMAN HISTONE H2B.2 20-47 PH2B_HUMAN HISTONE H2B (H2B.1 A) 20-47 PHA25_HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DQ(5) 142-169 ALPHA CHAIN PRECURSOR PHA2K_HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-W53 56-83 BETA CHAIN PRECURSOR PHA2P_HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DP(W4) 50-77 BETA CHAIN PRECURSOR PHA2Q_HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DP(W2) 50-77 BETA CHAIN PRECURSOR PHA2S_HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, SB BETA 16-43 CHAIN PRECURSOR PHBG1_HUMAN HEPARIN-BINDING GROWTH FACTOR PRECURSOR 1 (HBGF-1) 102-129 (ACIDIC FIBROBLAST PHBG3_HUMAN INT-2 PROTO-ONCOGENE PROTEIN PRECURSOR (HBGF-3) 61-91 PHBG6_HUMAN FIBROBLAST GROWTH FACTOR-6 PRECURSOR (FGF-6) 41-75 159-186 (HBGF-6) (HST-2) PHBI_HUMAN P59 PROTEIN (HSP BINDING IMMUNOPHILIN) (HBI) 264-312 (POSSIBLE PEPTIDYL-PROLYL PHEM4_HUMAN UROPORPHYRINOGEN-III SYNTHASE (EC 4.2.1.75)  74-118 (UROPORPHYRINOGEN-III PHEP2_HUMAN HEPARIN COFACTOR II PRECURSOR (HC-II) (PROTEASE 169-196 INHIBITOR LEUSERPIN 2) PHEPS_HUMAN SERIN PROTEASE HEPSIN (EC 3.4.21.-) 22-49 PHEXA_HUMAN BETA-HEXOSAMINIDASE ALPHA CHAIN PRECUROSR 356-383 (EC 3.2.1.52) (N-ACETYL- PHEXB_HUMAN BETA-HEXOSAMINIDASE BETA CHAIN PRECUROSR 388-415 (EC 3.2.1.52) (N-ACETYL-BETA PHMX1_HUMAN HOMEOBOX PROTEIN MSX-1 (HOX-7) 178-212 PHNFA_HUMAN HEPATOCYTE NUCLEAR FACTOR 1-ALPHA (HNF-1A) (LIVER  2-29 SPECIFIC PHO1_HUMAN HEME OXYGENASE 1 (EC 1.14.99.3) (HO-1) 197-224 PHPPD_HUMAN 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE (EC 1.13.11.27) 306-333 (4HPPD) PHRX_HUMAN ZINC FINGER PROTEIN HRX 521-548 914-974 1637-1666 2215-2286 2289-2316 3317-3344 3448-3475 PHS1_HUMAN HEMATOPOIETIC LINEAGE CELL SPECIFIC PROTEIN 43-70 PHS9A_HUMAN HEAT SHOCK PROTEIN HSP 90-ALPHA (HSP 86) 443-470 640-674 PHSER_HUMAN HEAT-STABLE ENTEROTOXIN RECEPTOR PRECURSOR (GC-C) 511-545 (INTESTINAL PHSF1_HUMAN HEAT SHOCK FACTOR PROTEIN 1 (HSF 1) (HEAT SHOCK 113-140 168-209 TRANSCRIPTION FACTOR PHSF2_HUMAN HEAT SHOCK FACTOR PROTEIN 2 (HSF 2) (HEAT SHOCK 117-198 TRANSCRIPTION FACTOR PHV2I_HUMAN IG HEAVY CHAIN PRECURSOR V-II REGION (ARH-77)  67-108 PHV3T_HUMAN IG HEAVY CHAIN V-III REGION (GAL) 47-74 PHX11_HUMAN HOMEOBOX PROTEIN HOX-II (TCL-3 PROTO-ONOGENE) 262-289 PHXB7_HUMAN HOMEOBOX PROTEIN HOX-B7 (HOX-2C) (HHO.C1) 135-162 PIAPP_HUMAN ISLET AMYLOID POLYPEPTIDE 53-80 PIBP3_HUMAN INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN 3 183-210 PRECURSOR (IGFBP-3) PIC1_HUMAN PLASMA PROTEASE C1 INHIBITOR PRECURSOR (C1 INH) 251-278 PICA2_HUMAN INTERCELLULAR ADHESION MOLECULE-2 PRECURSOR (ICAM-2) 57-84 PIDE_HUMAN INSULIN-DEGRADING ENZYME (EC 3.4.99.45) (INSULINASE) 474-504 907-941 (INSULIN PIF41_HUMAN EUKARYOTIC INITIATION FACTOR 4A-I (EIF-4A-I) 232-259 322-349 PIF4B_HUMAN INTRINSIC FACTOR PRECURSOR (IF) (GASTRIC INTRINSIC 149-176 406-433 FACTOR) PIF_HUMAN INHIBIN BETA A CHAIN PRECURSOR (ACTIVIN BETA-A CHAIN) 308-349 (ERYTHROID PIHBA_HUMAN INTERLEUKIN-1 ALPHA PRECURSOR (IL-1 ALPHA)  80-107 183-210 (HEMATOPOIETIN-1) PIL1A_HUMAN INTERLEUKIN-1 RECEPTOR, TYPE I PRECURSOR (IL-1R1)  76-110 172-199 (P80) PIL1R_HUMAN INTERLEUKIN-1 RECEPTOR, TYPE I PRECURSOR (IL-1R1) 437-467 (P80) PIL1S_HUMAN INTERLEUKIN-1 RECEPTOR, TYPE II PRECURSOR (IL-1R2) 159-186 PIL5R_HUMAN INTERLEUKIN-5 RECEPTOR ALPHA CHAIN PRECURSOR  87-114 (IL-5R-ALPHA) PIL6_HUMAN INTERLEUKIN-6 PRECURSOR (IL-6) (B-CELL STIMULATOR 112-139 FACTOR 2) (BSF-2) PINAI_HUMAN INTERFERON ALPHA-1 PRECURSOR  94-121 PINAR_HUMAN INTERFERON ALPHA RECEPTOR PRECURSOR (IFN-ALPHA-REC)  90-117 164-191 300-327 508-535 PINB_HUMAN INTERFERON BETA PRECURSOR (FIBROBLAST)  88-129 BINI1_HUMAN INTERFERON-INDUCED 17 KD PROTEIN (CONTAINS:  83-121 INTERFERON-INDUCED 15 KD BINI6_HUMAN INTERFERON-INDUCED 56 KD PROTEIN (IFI-56K) 51-78 216-245 393-430 PINSR_HUMAN INSULIN RECEPTOR PRECURSOR (EC 2.7.1.112) (IR) 592-619 PINVO_HUMAN INVOLUCRIN 119-146 229-273 326-363 386-450 PIP3K_HUMAN 1D-MYO-INOSITOL-TRISPHOSPHATE 3-KINASE A 121-162 (EC 2.7.1.127) (INOSITOL PIPSP_HUMAN PLASMA SERINE PROTEASE (PROTEIN C) INHIBITOR  90-117 206-233 PRECURSOR (PCI) PIRBP_HUMAN INTERPHOTORECEPTOR RETINOID-BINDING PROTEIN 670-697 PRECURSOR (IRBP) PIRF2_HUMAN INTERFERON REGULATORY FACTOR 2 (IRF-2) 157-193 PIT5P_HUMAN 75 KD INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 235-262 PRECURSOR PITA2_HUMAN PLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (GPIA) 579-606 900-927 (COLLAGEN RECEPTO PITA5_HUMAN FIBRONECTIN RECEPTOR ALPHA SUBUNIT PRECURSOR 250-284 657-695 765-792 (INTEGRIN ALPHA-F) PITA6_HUMAN INTEGRIN ALPHA-6 PRECURSOR (VLA-6) (INTEGRIN 884-911 944-974 ALPHA-E) (CD49F) PITAL_HUMAN LEUKOCYTE ADHESION GLYCOPROTEIN LFA1 ALPHA CHAIN 256-283 310-341 795-822 PRECURSOR (LEUKOC PITAM_HUMAN CELL SURFACE GLYCOPROTEIN MAC-1 ALPHA SUBUNIT 1044-1078 PRECURSOR (CR-3 ALPHA PITAV_HUMAN VITRONECTIN RECEPTOR ALPHA SUBUNIT PRECURSOR 230-264 (INTEGRIN ALPHA-V) PITB1_HUMAN FIBRONECTIN RECEPTOR BETA SUBUNIT PRECURSOR 218-245 354-399 (INTEGRIN BETA-1) (CD29) PITB2_HUMAN CELL SURFACE ADHESION GLYCOPROTEINS LFA-1, CR3 AND 339-366 705-732 P150,95, BETA- PITB3_HUMAN PLATELET MEMBRANE GLYCOPROTEIN IIIA PRECURSOR 324-351 (GPIIIA) (INTEGRIN BETA- PITB4_HUMAN INTEGRIN BETA-4 SUBUNIT PRECURSOR (GP150) 342-369 PITB5_HUMAN INTEGRIN BETA-5 SUBUNIT PRECURSOR 724-751 PITB6_HUMAN INTEGRIN BETA-6 SUBUNIT PRECURSOR 311-338 352-393 PITB8_HUMAN INTEGRIN BETA-8 SUBUNIT PRECURSOR 362-399 696-737 PITI2_HUMAN INTER-ALPHA-TRYPSIN INHIBITOR COMPLEX COMPONENT II 134-161 425-452 772-818 PRECURSOR PK1CJ_HUMAN KERATIN, TYPE I CYTOSKELETAL 10 (CYTOKERATIN 10) 154-187 196-227 337-399 428-462 (K10) PK1CM_HUMAN KERATIN, TYPE I CYTOSKELETAL 13 (CYTOKERATIN 13) 12-142 (K13) PK1CN_HUMAN KERATIN, TYPE I CYTOSKELETAL 14 (CYTOKERATIN 14) 122-152 306-335 393-424 (K14) PK1CO_HUMAN KERATIN, TYPE I CYTOSKELETAL 15 (CYTOKERATIN 15) 113-143 (K15) PK1CP_HUMAN KERATIN, TYPE I CYTOSKELETAL 16 (CYTOKERATIN 16) 308-339 (K16) PK1CQ_HUMAN KERATIN, TYPE I CYTOSKELETAL 17 (CYTOKERATIN 17) 122-152 302-346 393-431 (K17) PK1CR_HUMAN KERATIN, TYPE I CYTOSKELETAL 18 (CYTOKERATIN 18)  87-114 251-298 337-385 (K18) PK1CS_HUMAN KERATIN, TYPE I CYTOSKELETAL 19 (CYTOKERATIN 19)  88-118 317-362 370-397 (K19) PK2C1_HUMAN KERATIN, TYPE I CYTOSKELETAL 1 (CYTOKERATIN 1) (K1) 196-226 346-384 390-467 (CYTOSKELETAL 67 PK2C2_HUMAN KERATIN, TYPE II CYTOSKELETAL 65 KD 215-248 364-405 461-488 PK2C4_HUMAN KERATIN, TYPE II CYTOSKELETAL 4 (CYTOKERATIN 4) (K4) 42-73 126-153 189-248 (FRAGMENT) PK2C5_HUMAN KERATIN, TYPE II CYTOSKELETAL 5 (CYTOKERATIN 5) (K5) 185-246 332-373 (58 KD PK2C6_HUMAN KERATIN, TYPE II CYTOSKELETAL 6 (CYTOKERATIN 6) (K6) 178-239 325-366 422-449 (K6B KERATIN) PK2C8_HUMAN KERATIN, TYPE II CYTOSKELETAL 8 (CYTOKERATIN 8) (K8) 140-167 PK2CA_HUMAN KERATIN, TYPE II CYTOSKELETAL 56 KD (K6A KERATIN)  7-34 120-161 217-244 (FRAGMENT) KP6PF_HUMAN 6-PHOSPHOFRUCTOKINASE, MUSCLE TYPE (EC 2.7.1.11) 140-167 (PHOSPHOFRUCTOKINASE PK6PL_HUMAN 6-PHOSPHOFRUCTOKINASE, LIVER TYPE (EC 2.7.1.11) 49-80 128-159 (PHOSPHOFRUCTOKINASE PKABL_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE ABL 498-525 (EC 2.7.1.112) (P150) PKAC_HUMAN IG KAPPA CHAIN C REGION 37-85 PKALM_HUMAN KALLMANN SYNDROME PROTEIN PRECURSOR (ADHESION 380-414 MOLECULE-LIKE X-LINK PKAP0_HUMAN CAMP-DEPENDENT PROTEIN KINASE TYPE I-ALPHA 179-206 REGULATORY CHAIN PKAP1_HUMAN CAMP-DEPENDENT PROTEIN KINASE TYPE I-BETA 177-204 REGULATORY CHAIN PKAP2_HUMAN CAMP-DEPENDENT PROTEIN KINASE TYPE II-ALPHA 175-202 290-317 REGULATORY CHAIN PKBF1_HUMAN NUCLEAR FACTOR KAPPA-B SUBUNIT-1 (NF-KAPPA-B P105 529-570 SUBUNIT PKCRB_HUMAN CREATINE KINASE, B CHAIN (EC 2.7.3.2) 301-328 PKECK_HUMAN TYROSINE PROTEIN-KINASE ECK PRECURSOR (EC 2.7.1.112) 466-493 (EPITHELIAL CELL PKFER_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FER 219-246 564-591 (EC 2.7.1.112) (P94-FER) PKFER_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FER 101-145 295-322 (EC 2.7.1.112) (C-FES) PKFLT_HUMAN RECEPTOR-RELATED TYROSINE KINASE FLT PRECURSOR 208-235 319-353 (EC 2.7.1.112) PKFMS_HUMAN MACROPHAGE COLONY STIMULATION FACTOR I RECEPTOR 293-320 PRECURSOR (CSF-1-R) PKFYN_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FYN 199-233 (EC 2.7.1.112) (P59-FYN) KGGPB_HUMAN CGMP-DEPENDENT PROTEIN KINASE, BETA ISOZYME (CGK) 17-54 (EC 2.7.1.37) PKHEK_HUMAN TYROSINE KINASE HEK RECEPTOR PRECURSOR (EC 2.7.1.112) 646-673 PKINH_HUMAN KINESIN HEAVY CHAIN 125-155 425-452 471-542 633-680 689-716 872-899 PKKIT_HUMAN KIT PROTO-ONCOGENE TYROSINE KINASE PRECURSOR 235-263 (EC 2.7.1.112) PKMET_HUMAN HEPATOCYTE GROWTH FACTOR RECEPTOR PRECURSOR 898-925 (MET PROTO-ONCOGENE PHNH_HUMAN KININOGEN, HMW PRECURSOR (ALPHA-2-THIOL PROTEINASE 505-532 INHIBITOR) PKP58_HUMAN GALACTOSYLTRANSFERASE ASSOCICATED PROTEIN KINASE  81-108 P58/GTA (EC 2.7.1.-) PKP68_HUMAN INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED 149-179 191-225 285-312 PROTEIN KINASE PKP78_HUMAN PUTATIVE SERINE/THREONINE-PROTEIN KINASE P78 582-609 (EC 2.7.1.-) PKPCL_HUMAN PROTEIN KINASE C, ETA TYPE (EC 2.7.1.-) (NPKC-ETA) 318-345 (PKC-L) PKPT1_HUMAN SERINE/THREONINE-PROTEIN KINASE PCTAIRE-1 (EC 2.7.1-) 149-176 209-253 PKPY1_HUMAN PYRUVATE KINASE, M1 (MUSCLE) ISOZYME (EC 2.7.1.40) 243-289 (CYTOSOLIC THYROID PKPY2_HUMAN PYRUVATE KINASE, M2 (MUSCLE) (EC 2.7.1.40) 243-289 PKPYR_HUMAN PYRUVATE KINASE, ISOZYME R (EC 2.7.1.40)  2-29 PKRET_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RET 183-217 (EC 2.7.1.112) PKROS_HUMAN ROS PROTO-ONCOGENE TYROSINE KINASE (EC 2.7.1.112) 157-203 (FRAGMENT) PKSRC_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC 143-170 (EC 2.7.1.112) (P60-SRC) PKU7_HUMAN LUPUS KU AUTOANTIGEN PROTEIN P70 (70 KD SUBUNIT OF 235-279 KU ANTIGEN) PKU86_HUMAN LUPUS KU AUTOANTIGEN PROTEIN P86 (86 KD SUBUNIT OF 258-292 KU ANTIGEN) PKYES_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE YES 209-243 (EC 2.7.1.112) (P61-YES) PLAM1_HUMAN LAMIN B1 32-66 117-144 152-193 214-241 397-424 480-507 510-539 PLAMA_HUMAN LAMIN A (70 KD LAMIN) 32-88 114-165 292-343 PLAMC_HUMAN LAMIN C 32-88 114-165 292-343 PLAR_HUMAN LAR PROTEIN PRECURSOR (LEUKOCYTE ANTIGEN RELATED) 935-969 (EC 3.1.3.48) PLA_HUMAN LUPUS LA PROTEIN (SJOGREN SYNDROME TYPE B ANTIGEN 191-222 295-342 (SS-B)) PLCAT_HUMAN PHOSPHATIDYLCHOLINE-STEROL ACYLTRANSFERASE 131-158 PRECURSOR (EC 2.3.1.43) PLDHH_HUMAN L-LACTATE DEHYDROGENASE H CHAIN (EC 1.1.1.27)  81-108 302-329 (LDH-B) PLDHM_HUMAN L-LACTATE DEHYDROGENASE M CHAIN (EC 1.1.1.27) 225-252 (LDH-A) PLDLR_HUMAN LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR 483-510 PLECH_HUMAN ASIALOGLYCOPROTEIN RECEPTOR 1 (HEPATIC LECTIN H1) 62-96 (ASGPR) PLEM3_HUMAN P-SELECTIN PRECURSOR (GRANULE MEMBRANE PROTEIN 140) 32-59  87-116 (GMP-140) (PADGEM) PLGUL_HUMAN LACTOYLGLUTATHIONE LYASE (EC 4.4.1.5)  83-117 (METHYLGLYOXALASE) PLIF_HUMAN LEUKAEMIA INHIBITORY FACTOR PRECURSOR (LIF)  95-122 (DIFFERENTIATION- PLIN1_HUMAN LINE-1 REVERSE TRANSCRIPTASE HOMOLOG 152-179 232-263 298-358 671-698 874-901 1036-1066 PLIPG_HUMAN TRIACYLGLYCEROL LIPASE PRECURSOR (EC 3.1.1.3) 158-185 (LIPASE, GASTRIC) PLIPS_HUMAN HORMONE SENSITIVE LIPASE (EC 3.1.1.-) (HSL) 305-332 PLKHA_HUMAN LEUKOTRIENE A-4 HYDROLASE (EC 3.3.2.6) (LTA-4 42-83 290-324 HYDROLASE) (LEUKTRIENE PLMA_HUMAN LAMININ A CHAIN PRECURSOR 1318-1345 1741-1771 1785-1812 1824-1851 1884-1921 1965-1999 2026-2059 2091-2118 PLMB1_HUMAN LAMININ B1 CHAIN PRECURSOR 1267-1314 1364-1394 1597-1631 1651-1714 1722-1781 PLMB2_HUMAN LAMININ B2 CHAIN PRECURSOR 1103-1135 1513-1547 PLMP2_HUMAN LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN 2 155-182 PRECURSOR (LAMP-2) PLOX2_HUMAN ARACHIDONATE 12-LIPOXYGENASE (EC 1.13.11.31) 341-368 (12-LOX) PLOX5_HUMAN ARACHIDONATE 5-LIPOXYGENASE (EC 1.13.11.31) 50-87 (5-LIPOXYGENASE) (5-LO) PLPH_HUMAN LACTASE-PHLORIZIN HYDROLASE PRECURSOR (EC 3.2.1.108) 776-803 (EC 3.2.1.62) PLRPB_HUMAN PROTEIN-TYROSINE PHOSPHATASE BETA PRECURSOR 140-167 589-637 (EC 3.1.3.48) (PTP-BETA) PLRPG_HUMAN PROTEIN-TYROSINE PHOSPHATASE GAMMA PRECURSOR 1081-1108 (EC 3.1.3.48) PLRPZ_HUMAN PROTEIN-TYROSINE PHOSPHATASE ZETA PRECURSOR 553-587 1024-1051 1973-2000 (EC 3.1.3.48) (PTP-ZETA) PLSHR_HUMAN LUTROPIN-CHORIOGONALDOTROPIC HORMONE RECEPTOR  66-114 448-480 PRECURSOR (LG/CG-5) PLV2B_HUMAN IG LAMBDA CHAIN V-II REGION (NEI) 61-88 PLYAG_HUMAN LYSOSOMAL ALPHA-GLUCOSIDASE PRECURSOR (EC 3.2.1.20) 885-912 (ACID MALTASE) PM2OM_HUMAN MITOCHONDRIAL 2-OXOGLUTARATE/MALATE CARRIER PROTEIN 50-77 (OGCP) PMAC2_HUMAN GALACTOSE-SPECIFIC LECTIN (MAC-2 ANTIGEN) 219-246 (IGE-BINDING PROTEIN) (35 KD PMAN9_HUMAN MAN(9)-ALPHA-MANNOSIDASE (EC 3.2.1.-) 414-441 PMAMA_HUMAN MANNOSE-6-PHOSPHATE ISOMERASE (EC 5.3.1.8) 60-87 (PHOSPHOMANNOSE ISOMERASE) PMANR_HUMAN MACROPHAGE MANNOSE RECEPTOR PRECURSOR 248-284 1147-1182 PMAP2_HUMAN MICROTUBULE-ASSOCIATED PROTEIN 2 (FRAGMENT) 434-478 PMAP4_HUMAN MICROTUBULE-ASSOCIATED PROTEIN 4 408-449 PMAX_HUMAN MAX PROTEIN 117-144 PMDM2_HUMAN MDM2 PROTEIN (P53-ASSOCIATED PROTEIN) 235-288 PMDR1_HUMAN MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROTEIN 1) PMERL_HUMAN MERLIN (SCHWANNMIN) 377-407 532-566 PMERO_HUMAN MEROSIN HEAVY CHAIN (LAMININ CHAIN A2) (FRAGMENT)  71-105 139-173 431-458 791-818 PMGMT_HUMAN METHYLATED-DNA-PROTEIN-CYSTEINE METHYLTRANSFERASE  91-118 (EC 2.1.1.63) (6-O- PMKLP_HUMAN MITOTIC KINESIN-LIKE PROTEIN-1 207-234 319-346 510-537 549-608 PMLCH_HUMAN MELANIN-CONCENTRATING HORMONE PRECURSOR  8-35 PMLK1_HUMAN MIXED LINEAGE KINASE 1 (EC 2.7.1.-) (FRAGMENT) 130-157 321-348 PMMSA_HUMAN METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 393-420 PMOES_HUMAN MOESIN (MEMBRANE-ORGANIZING EXTENSION SPIKE PROTEIN) 119-146 351-403 PMPCP_HUMAN MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN PRECURSOR 286-313 PMPI3_HUMAN M-PHASE INDUCER PHOSPHATASE 3 (EC 3.1.3.48) 72-99 PMPKK_HUMAN DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE 19-50 KINASE (EC 2.7.1.-) PMPRI_HUMAN CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR 1569-1596 2437-2478 PRECURSOR (CI MAN-6- PMRP_HUMAN MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 396-423 507-548 PMSHR_HUMAN MELANOCYTE STIMULATING HORMONE RECEPTOR (MSH-R) 38-65 (MELANOTROPIN PMSRE_HUMAN MACROPHAGE SCAVENGER RECEPTOR TYPES I AND II 173-204 230-260 (MACROPHAGE ACETYLATED PMTDM_HUMAN DNA (CYTOSINE-5)-METHYLTRANSFERASE (EC 2.1.1.37) 387-414 601-628 (DNA PMTF1_HUMAN MITOCHONDRIAL TRANSCRIPTION FACTOR 1 PRECURSOR 181-212 (MTTF1) PMUTA_HUMAN METHYLMALONYL-COA MUTASE PRECURSOR (EC 5.4.99.2) 468-519 (MCM) PMX1_HUMAN INTERFERON-REGULATED RESISTANCE GTP-BINDING PROTEIN 108-150 MXA (INTERFERON- PMX2_HUMAN INTERFERON-REGULATED RESISTANCE GTP-BINDING PROTEIN 451-489 670-697 MXB (P78 RELATED PMYBA_HUMAN MYB-RELATED PROTEIN A (FRAGMENT) 619-646 PMYBB_HUMAN MYB-RELATED PROTEIN B  87-117 PMYCN_HUMAN N-MYC PROTO-ONCOGENE PROTEIN 263-300 413-461 PMYC_HUMAN MYC PROTO-ONCOGENE PROTEIN 393-422 PMYF4_HUMAN MYOGENIC FACTOR MYF-4 (MYOGENIN) 119-146 PMYF5_HUMAN MYOGENIC FACTOR MYF-5 121-148 PMYP2_HUMAN MYOGENIC P2 PROTEIN  70-110 PMYPR_HUMAN MYELIN PROTEOLIPID PROTEIN (PLP) (LIPOPHILIN) 43-70 (CONTAINS: MYELIN PMYSA_HUMAN MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM 38-75  84-111 137-178 236-324 398-435 440-485 (FRAGMENT) PMYSB_HUMAN MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM 48-75 951-981  997-1044 1088-1122 1192-1234 1266-1332 1360-1408 1442-1479 1488-1532 1541-1582 1640-1681 1683-1710 1801-1838 PMYSE_HUMAN MYOSIN HEAVY CHAIN, FAST SKELETAL MUSCLE, EMBRYONIC 46-73 860-903  952-1077 1119-1146 1193-1235 1267-1340 1364-1411 1483-1597 1641-1675 1707-1734 1827-1858 PMYSP_HUMAN MYOSIN HEAVY CHAIN, PERINATAL CARDIAC MUSCLE 50-77  95-125 141-188 215-272 403-483 507-552 586-624 685-736 784-818 (FRAGMENT) 823-907 946-987 1049-1076 PMYSS_HUMAN MYOSIN HEAVY CHAIN, SKELETAL MUSCLE (FRAGMENT) 133-160 193-280 304-349 423-460 468-526 581-608 645-681 743-798 808-835 846-873 PMYT1_HUMAN MYELIN TRANSCRIPTION FACTOR 1 (MYTI) (FRAGMENT) 640-678 PNACA_HUMAN SODIUM/CALCIUM EXCHANGER PRECURSOR (NA+/CA2+- 492-519 594-621 705-735 EXCHANGE PROTEIN) PNCA2_HUMAN NEURAL CELL ADHESION MOLECULE, PHOSPHATIDYLINOSITOL- 255-282 LINKED ISOFORM PNCF1_HUMAN NEUTROPHIL CYTOSOL FACTOR 1 (NCF-47K) (47 KD 234-261 310-337 AUTOSOMAL CHRONIC PNCF2_HUMAN NEUTROPHIL NADPH OXIDASE FACTOR (P67-PHOX)  5-32 PNEFA_HUMAN DNA-BINDING PROTEIN NEFA PRECURSOR 50-77  82-112 343-395 PNEP_HUMAN NEPRILYSIN (EC 3.4.24.11) (NEUTRAL ENDOPEPTIDASE) 170-216 644-671 (NEP) PNF1_HUMAN NEUROFIBROMIN (NEUROFIBROMATOSIS-RELATED PROTEIN 1145-1172 1388-1422 1639-1666 NF-1) (FRAGMENT) PNFH_HUMAN NEUROFILAMENT TRIPLET H PROTEIN (200 KD  91-128 431-490 NEUROFILAMENT PROTEIN) (NF-H) PNFL_HUMAN NEUROFILAMENT TRIPLET L PROTEIN (68 KD NEUROFILAMENT  92-126 441-468 PROTEIN) (NF-L) PNFM_HUMAN NEUROFILAMENT TRIPLET M PROTEIN (160 KD NEUROFILAMENT 101-141 164-194 215-280 315-372 737-764 794-826 872-913 PROTEIN) (NF-M) PNK1R_HUMAN SUBSTANCE-P RECEPTOR (SPR) (NK-1 RECEPTOR) (NK-1R) 338-365 PNK4_HUMAN NATURAL KILLER CELLS PROTEIN 4 PRECURSOR 166-193 PNKCR_HUMAN NK-TUMOR RECOGNITION PROTEIN (NATURAL-KILLER CELLS 187-214 448-475 559-599 701-742 816-843 1080-1133 CYCLOPHILIN- PNKGA_HUMAN NKG2-A AND NKG2-B TYPE II INTEGRAL MEMBRANE 28-55 PROTEINS PNOSI_HUMAN NITRIC-OXIDE SYNTHASE, BRAIN (EC 1.14.13.39) (NOS, 389-416 1116-1146 1292-1319 TYPE I) PNOS3_HUMAN NITRIC-OXIDE SYNTHASE, ENDOTHELIAL (EC 1.14.13.39) 389-416 (EC-NOS) (NOS, PNTGI_HUMAN SODIUM- AND CHLORIDE-DEPENDENT GABA TRANSPORTER 1 131-158 PNTR_HUMAN NEUROTENSIN RECEPTOR (NT-R) 57-84 PNTSE_HUMAN SODIUM DEPENDENT SEROTONIN TRANSPORTER (5HT 71-98 TRANSPORTER) (5HTT) PNTTA_HUMAN SODIUM- AND CHLORIDE-DEPENDENT TAURINE TRANSPORTER 120-147 PNU2M_HUMAN NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 2 (EC 1.6.5.3) 202-240 PNU4M_HUMAN NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4 (EC 1.6.5.3) 164-191 372-399 PNUBN_HUMAN NUCLEOBINDIN PRECURSOR 46-73 360-387 PNUCL_HUMAN NUCLEOLIN (PROTEIN C23) 462-508 PNY3R_HUMAN PUTATIVE NEUROPEPTIDE Y RECEPTOR TYPE 3 (PNY3-R) 115-142 (FB22) (NPYRL) POAT_HUMAN ORNITHINE AMINOTRANSFERASE PRECURSOR (EC 2.6.1.13)  98-128 (ORNITHINE-OXO- POC3A_HUMAN OCTAMER-BINDING TRANSCRIPTION FACTOR 3A (OCT-3A) 139-173 POC3B_HUMAN OCTAMER-BINDING TRANSCRIPTION FACTOR 3B (OCT-3B) 37-78 POCRL_HUMAN LOWE'S OCULOCEREBRORENAL SYNDROME PROTEIN 704-735 PODB2_HUMAN LIPOAMIDE ACYLTRANSFERASE COMPONENT (E2) PRECURSOR 100-127 375-402 OF BRANCHED-CHAI PODP2_HUMAN DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT (E2) 72-99 OF PYRUVATE POMGP_HUMAN OLIODENDROCYTE-MYELIN GLYCOPROTEIN PRECURSOR (OMG) 53-80 POPSB_HUMAN BLUE-SENSITIVE OPSIN (BLUE CONE PHOTORECEPTOR 220-247 PIGMENT) POPSG_HUMAN GREEN-SENSITIVE OPSIN (GREEN CONE PHOTORECEPTOR  90-117 239-266 PIGMENT) POPSR_HUMAN RED-SENSITIVE OPSIN (RED CONE PHOTORECEPTOR PIGMENT)  90-117 239-266 POSTP_HUMAN OSTEOPONTIN PRECURSOR (BONE SIALOPROTEIN 1) 239-266 (URINARY STONE PROTEIN) POTC_HUMAN ORNITHINE CARBAMOYLTRANSFERASE PERCURSOR (EC 2.1.3.3) 170-204 POTNC_HUMAN OSTEONECTIN PRECURSOR (BASEMENT MEMBRANE PROTEIN 173-207 BM-40) POXYB_HUMAN OXYSTEROL-BINDING PROTEIN  89-123 190-217 290-317 577-604 POXYR_HUMAN OXYTOCIN RECEPTOR (OT-R) 350-377 PP107_HUMAN RETINOBLASTOMA-ASSOCIATED PROTEIN-LIKE 107 KD 159-186 422-449 HOMOLOG (P107) PP1DP_HUMAN DNA POLYMERASE ALPHA HOLOENZYME-ASSOCIATED 19-60 637-664 PROTEIN P1 PP47_HUMAN PLECKSTRIN (P47) 298-325 PP4HA_HUMAN PROLYL 4-HYDROXYLASE ALPHA SUBUNIT PRECURSOR 26-69 191-218 (EC 1.14.11.2) PP60_HUMAN MITOCHONDRIAL MATRIX PROTEIN P1 PRECURSOR (P60 72-99 271-298 361-407 LYMPHOCYTE PROTEIN) PP85A_HUMAN PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY ALPHA 12-39 428-476 586-613 688-715 SUBUNIT (P13-KINASE PPAP1_HUMAN PANCREATITIS ASSOCIATED PROTEIN 1 PRECURSOR  77-104 PPAX5_HUMAN PAIRED BOX PROTEIN PAX-5 (B-CELL SPECIFIC 157-187 TRANSCRIPTION FACTOR) PPDGA_HUMAN PLATELET-DERIVED GROWTH FACTOR, A CHAIN PRECURSOR 38-65 (PDGF A-CHAIN) PPEC1_HUMAN PLATELET ENDOTHELIAL CELL ADHESION MOLECULE 685-719 PRECURSOR (PECAM-1) PPENK_HUMAN PROENKEPHALIN A PRECURSOR 142-176 PPERE_HUMAN EOSINOPHIL PEROXIDASE PRECURSOR (EC 1.11.1.7) (EPO) 308-335 (FRAGMENT) PPERF_HUMAN PERFORIN 1 PRECURSOR (P1) (LYMPHOCYTE PORE FORMING 411-438 PROTEIN) (PFP) PPF4L_HUMAN PLATELET BASIC PROTEIN PRECURSOR (PBP) (CONTAINS: 21-55 CONNECTIVE-TISSUE PPGCA_HUMAN CARTILAGE-SPECIFIC PROTEOGLYCAN CORE PROTEIN  73-100 PRECURSOR (CSPCP) PPGCS_HUMAN LARGE FIBROBLAST PROTEOGLYCAN PRECURSOR (VERSICAN) 64-98 1390-1417 1553-1580 (CHONDROITIN) PPGDH_HUMAN 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE (NAD(+))  87-118 (EC 1.1.1.141) (PGDH) PPGDR_HUMAN BETA PLATELET-DERIVED GROWTH FACTOR RECEPTOR 294-321 354-384 465-495 PRECURSOR (EC 2.7.1.112) PPGDS_HUMAN ALPHA PLATELET-DERIVED GROWTH FACTOR RECEPTOR 64-94 347-395 461-488 524-551  986-1058 PRECURSOR PPGHS_HUMAN PROSTAGLANDIN G/H SYNTHASE PRECURSOR (EC 1.14.99.1) 331-358 (CYCLOOXYGENSE) PPGS1_HUMAN BONE/CARTILAGE PROTEOGLYCAN I PRECURSOR (BIGLYCAN) 100-127 (PG-S1) PPH4H_HUMAN PHENYLALANINE-4-HYDROXYLASE (EC 1.14.16.1) (PAH) 239-266 (PHE-4- PPHB_HUMAN PROHIBITIN 41-68 PPHOS_HUMAN PHOSDUCIN (33 KD PHOTOTRANSDUCING PROTEIN) (MEKA 184-225 PROTEIN) PPHS1_HUMAN GLYCOGEN PHOSPHORYLASE, LIVER FORM (EC 2.4.1.1) 116-143 PPHS2_HUMAN GLYCOGEN PHOSPHORYLASE, MUSCLE FORM (EC 2.4.1.1) 532-559 PPHS3_HUMAN GLYCOGEN PHOSPHORYLASE, BRAIN FORM (EC 2.4.1.1) 533-560 PPIP4_HUMAN 1-PHOSPHATIDYLINOSITOR-4,5-BISPHOSPHATE 908-935 PHOSPHODIESTERASE BETA 2 PPIP5_HUMAN 1-PHOSPHATIDYLINOSITOR-4,5-BISPHOSPHATE 142-169 239-266 PHOSPHODIESTERASE GAMMA 2 PPLAK_HUMAN PLAKOGLOBIN (DESMOPLAKIN III) 373-400 PPLSL_HUMAN L-PLASTIN (FIMBRIN) 507-534 PPLST_HUMAN T-PLASTIN (FIMBRIN) 510-561 PPM22_HUMAN PHERIPHERAL MYELIN PROTEIN 22 (PMP-22)  3-33 PPMGB_HUMAN PHOSPHOGLYCERATE MUTASE, BRAIN FORM (EC 5.4.2.1)  81-111 (PGAM-B) (EC 5.4.2.4) PPMGM_HUMAN PHOSPHOGLYCERATE MUTASE, MUSCLE FORM (EC 5.4.2.1)  81-115 (PGAM-M) PPML1_HUMAN PROBABLE TRANSCRIPTION FACTOR PML-1 551-585 PPMLX_HUMAN PROBABLE TRANSCRIPTION FACTOR PML-X 551-585 PPMSC_HUMAN AUTOANTIGEN PM-SCL 103-130 PPOGA_HUMAN DNA-BINDING PROTEIN PO-GA 14-51 182-209 610-637 667-699 PPOL1_HUMAN RETROVIRUS-RELATED POL POLYPROTEIN (REVERSE 774-804 TRANSCRIPTASE PPOL2_HUMAN RETROVIRUS-RELATED POL POLYPROTEIN (FRAGMENT)  78-138 171-205 PPOR1_HUMAN OUTER MITOCHONDRIAL MEMBRANE PROTEIN PORIN 33-76 189-216 (VOLTAGE-DEPENDENT ANIO PPPAP_HUMAN PROSTATIC ACID PHOSPHATASE PRECURSOR (EC 3.1.3.2) 235-269 PPPAS_HUMAN RED CELL ACID PHOPHATASE 1, ISOZYME S (EC 3.1.3.2) 26-53 (ACP1) PPPOL_HUMAN NAD(+) ADP-RIBOSYLTRANSFERASE (EC 2.4.2.30) 699-729  972-1003 (POLY(ADP-RIBOSE) PPRC2_HUMAN PROTEASOME COMPONENT C2 (EC 3.4.99.46) (MACROPAIN 39-66 SUBUNIT C2) PPRC3_HUMAN PROTEASOME COMPONENT C3 (EC 3.4.99.46) (MACROPAIN 34-61 SUBUNIT C3) PPRC9_HUMAN PROTEASOME COMPONENT C9 (EC 3.4.99.46) (MACROPAIN 203-261 SUBUNIT C9) PPRGR_HUMAN PROGESTERONE RECEPTOR (PR) (FORMS A AND B) 846-890 PPRTS_HUMAN VITAMIN K-DEPENDENT PROTEIN S (BLOOD CLOTTING) 337-371 PRECURSOR PPRTZ_HUMAN VITAMIN K-DEPENDENT PROTEIN Z PRECURSOR 29-56 PPSOR_HUMAN PSORIASIN 65-92 PPSPD_HUMAN PULMONARY SURFACTANT-ASSOCIATED PROTEIN D PRECURSOR 224-251 (PSP-D) (SP-D) PPTHY_HUMAN PARATHYROID HORMONE PRECURSOR (PARATHYRIN)  86-113 PPTN1_HUMAN PROTEIN-TYROSINE PHOSPHATASE 1B (EC 3.1.3.48) 136-177 (PTP-1B) PPTN2_HUMAN T-CELL PROTEIN-TYROSINE PHOSPHATASE (EC 3.1.3.48) 59-86 138-178 (TCPTP) PPTN6_HUMAN PROTEIN-TYROSINE PHOSPHATASE 1C (EC 3.1.3.48) 227-261 512-580 (PTP-1C) (HEMATOPOIETIC PPTNB_HUMAN PROTEIN-TYROSINE PHOSPHATASE 2C (EC 3.1.3.48) 41-68 218-245 (PTP-2C) (PTP-1D) PPTNC_HUMAN PROTEIN-TYROSINE PHOSPHATASE G1 (EC 3.1.3.48) 618-645 695-722 (PTPG1) PPTRR_HUMAN PARATHYROID HORMONE/PARATHYROID HORMONE-RELATED 368-395 PEPTIDE PPTX3_HUMAN PENTAXIN-RELATED PROTEIN PTX3 PRECURSOR  74-101 PPUR2_HUMAN PHOSPHORIBOSYLAMINE-GLYCINE LIGASE (EC 6.3.4.13) 803-830 (GARS) (GLYCINAMIDE PPUR6_HUMAN MULTIFUNCTIONAL PROTEIN ADE2H1 391-418 (PHOSPHORIBOSYLAMINOIMIDAZOLE- PPUR8_HUMAN ADENYLOSUCCINATE LYASE (EC 4.3.2.2) 204-231 (ADENYLOSUCCINASE) (ASL) PPYR5_HUMAN URIDINE 5′-MONOPHOSPHATE SYNTHASE (UMP SYNTHASE 120-150 (UMP SYNTHASE) (OROTATE PPYRG_HUMAN CTP SYNTHASE (EC 6.3.4.2) (UTP-AMMONIA LIGASE) (CTP  86-113 300-334 SYNTHETASE) PPZP_HUMAN PREGNANCY ZONE PROTEIN PRECURSOR 315-354  990-1024 1162-1189 1405-1432 PRA74_HUMAN TRANSCRIPTION FACTOR IIF, ALPHA SUBUNIT (TFIIF, 474-501 ALPHA SUBUNIT) PRAB4_HUMAN RAS-RELATED PROTEIN RAB-4 38-65 PRAB6_HUMAN RAS-RELATED PROTEIN RAB-6 123-150 PRADI_HUMAN RADIXIN 308-335 414-463 510-537 PRB11_HUMAN RAS-RELATED PROTEIN RAB-11 (24KG) (YL-8) 151-178 PRBB3_HUMAN RETINOBLASTOMA BINDING PROTEIN 3 (RBBP-3) 129-156 161-223 (PRB-BINDING PROTEIN E2F-1) PRDP_HUMAN RD PROTEIN  9-53 PRENI_HUMAN RENIN PRECURSOR, RENAL (EC 3.4.23.15) 136-163 (ANGIOTENSINOGENASE) PREST_HUMAN RESTIN (CYTOPLASMIC LINKER PROTEIN-170 ALPHA-2) 190-217 333-370 445-472 571-619 744-771 784-852 1023-1050 1088-1139 1157-1184 (CLIP-170) 1216-1306 PRFA1_HUMAN REPLICATION PROTEIN A 70 KD DNA-BINDING SUBUNIT 208-235 425-455 (RP-1) (RF-A) PRFP_HUMAN TRANSFORMING PROTEIN (RFP) (RET FINGER PROTEIN) 183-217 PRH_HUMAN BLOOD GROUP RH(D) POLYPEPTIDE 361-388 PRIB1_HUMAN RIBOPHORIN I PRECURSOR  81-108 496-530 PRIB1_HUMAN RIBOPHORIN II PRECURSOR 142-172 361-388 PRIR1_HUMAN RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M1 CHAIN 42-69 370-400 (EC 1.17.4.1) PRL22_HUMAN 60S RIBOSOMAL PROTEIN L22 (EPSTEIN-BARR VIRUS SMALL  78-112 RNA ASSOCIATED PRL26_HUMAN 60S RIBOSOMAL PROTEIN L26 55-89 103-137 PRL9_HUMAN 60S ROBOSOMAL PROTEIN L9 146-192 PRLA0_HUMAN 60S ACIDIC ROBOSOMAL PROTEIN P0 (L10E) 138-165 PRO5_HUMAN 52 KD RO PROTEIN (SJOREN SYNDROME TYPE A ANTIGEN 190-235 238-265 (SS-A)) PRO6_HUMAN 60 KD RO PROTEIN (SJOREN SYNDROME TYPE A ANTIGEN 192-245 (SS-A)) PROC_HUMAN HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINS C1/C2 16-43 (HNRNP C1 AND HNPNP PROL_HUMAN HETEROGENEOUS RIBONUCLEOPROTEIN L (HRNPL) 501-528 PROU_HUMAN HETEROGENEOUS RIBONUCLEOPROTEIN U 630-657 PRPB1_HUMAN DNA-DIRECTED RNA POLYMERASE II 215 KD POLYPEPTIDE 269-296 665-720 879-906 1314-1341 1371-1398 PRPB2_HUMAN DNA-DIRECTED RNA POLYMERASE II 140 KD POLYPEPTIDE 626-667 1008-1035 PRPB3_HUMAN DNA-DIRECTED RNA POLYMERASE II 33 KD POLYPEPTIDE 242-274 PRRXA_HUMAN RETINOIC ACID RECEPTOR RXR-ALPHA 318-352 PRRXB_HUMAN RETINOIC ACID RECEPTOR RXR-BETA ISOFORM 1 376-403 PRRXC_HUMAN RETINOIC ACID RECEPTOR RXR-BETA ISOFORM 2 396-423 PRS12_HUMAN 40S RIBOSOMAL PROTEIN S12 60-87 PRS16_HUMAN 40S RIBOSOMAL PROTEIN S16  89-116 PRS25_HUMAN 40S RIBOSOMAL PROTEIN S25 26-53 PRS27_HUMAN 40S RIBOSOMAL PROTEIN S27A 14-41 PRS7_HUMAN 40S RIBOSOMAL PROTEIN S7 (S8)  73-100 PRS8_HUMAN 40S RIBOSOMAL PROTEIN S8 136-163 PRTC1_HUMAN RAS-LIKE PROTEIN TC21 123-150 PRU1A_HUMAN U1 SMALL NUCLEAR RIPONUCLEOPROTEIN A (U1 SNRNP A 13-47 PROTEIN) PRU2B_HUMAN U2 SMALL NUCLEAR RIPONUCLEOPROTEIN B″ 17-44 PRYNR_HUMAN RYANODINE RECEPTOR, SKELETAL MUSCLE 154-188 495-522 866-893 2750-2777 2820-2847 3304-3331 3529-3556 3912-3939 4921-4948 PS10A_HUMAN S-100 PROTEIN, ALPHA CHAIN 12-54 PS10B_HUMAN S-100 PROTEIN, BETA CHAIN 14-56 PS10D_HUMAN S-100D PROTEIN 31-58 PSAHH_HUMAN ADENOSYLHOMOCYSTEINASE (EC 3.3.1.1) (S-ADENOSYL-L- 389-416 HOMOCYSTEINE PAST1_HUMAN DNA-BINDING PROTEIN SATB1 709-736 PSCCA_HUMAN SQUAMOUS CELL CARCINOMA ANTIGEN (SCCA)  78-105 (PROTEIN T4-A) PSCF_HUMAN STEM CELL FACTOR PRECURSOR (SCF)  74-101 PSEM1_HUMAN SEMENOGELIN I PROTEIN PRECURSOR (SGI) (CONTAINS: 64-98 176-226 228-329 334-368 SEMINAL BASIC PSEM2_HUMAN SEMENOGELIN II PRECURSOR (SGII) 71-98 183-226 304-355 405-439 539-575 PSET_HUMAN SET PROTEIN 38-65 154-181 PSG1_HUMAN SECRETOGRANIN I PRECURSOR (CHROMOGRANIN B) 144-178 PSG2_HUMAN SECRETOGRANIN II PRECURSOR (CHROMOGRANIN C) 254-281 290-317 534-561 PSIAL_HUMAN BONE SIALOPROTEIN II PRECURSOR (BSP II)  84-113 155-193 256-283 PSN2L_HUMAN POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L 231-258 545-572 PSNOB_HUMAN SK1-RELATED ONCOGENE SNON 414-441 PSPCA_HUMAN SPECTRIN ALPHA CHAIN 193-220 570-621 655-712 1099-1126 1461-1502 1882-1901 1988-2022 2120-2154 2223-2250 2346-2373 PSPCB_HUMAN SPECTRIN BETA CHAIN, ERYTHROCYTE 150-177 316-350 486-520 648-675  987-1021 1027-1083 1287-1324 1347-1374 1834-1861 PSPRE_HUMAN SEPIAPTERIN REDUCTASE (EC 1.1.1.153) (SPR)  90-124 PSRF_HUMAN SERUM RESPONSE FACTOR (SRF)  77-104 480-507 PSRPR_HUMAN SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA SUBUNIT  76-110 (SR-ALPHA) PSSR1_HUMAN SOMATOSTATIN RECEPTOR TYPE 1 289-316 PSTHM_HUMAN STATHMIN (PHOSPHOPROTEIN P19) (ONCOPROTEIN P18) 47-74 (LEUKEMIA-ASSOCIATED PSUIS_HUMAN SUCRASE-ISOMALTASE, INTESTINAL (EC 3.2.1.48)/ 1748-1775 (EC 3.2.1.10) PSYB1_HUMAN SYNAPTOBREVIN 1 31-67 PSYD2_HUMAN ASPARTYL-TRNA SYNTHETASE ALPHA-2 SUBUNIT 44-71 (EC 6.1.1.12) (ASPARTATE- PSYEP_HUMAN MULTIFUNCTIONAL AMINOACYL-TRNA SYNTHETASE 174-201 740-771 (CONTAINS: GLUTAMYL-TRN PSYH_HUMAN HISTIDYL-TRAN SYNTHETASE (EC 6.1.1.21) (HISTIDINE- 380-442 468-502 TRNA LIGASE) PSYT1_HUMAN SYNAPTOTAGMIN I (P65) 140-167 250-277 PSYTC_HUMAN THREONYL-TRAN SYNTHETASE, CYTOPLASMIC (EC 6.1.1.3) 497-524 658-685 (THREONINE-TRNA PSYV_HUMAN VALYL-TRNA SYNTHETASE (EC 6.1.1.9) (VALINE-TRNA 230-257 413-440 LIGASE) (VALRS) PSYW_HUMAN TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2)  93-127 196-223 (TRYPTOPHAN-TRNA LIGASE) PT2EB_HUMAN TRANSCRIPTION INITIATION FACTOR IIE-BETA CHAIN 34-68 (TFIIE-BETA) PTAP4_HUMAN TRANSCRIPTION FACTOR AP-4 (FRAGMENT) 169-196 245-272 PTAPB_HUMAN TRANSCRIPTION FACTOR JUN-B 296-323 PTAPD_HUMAN TRANSCRIPTION FACTOR JUN-D 291-333 PTAU1_HUMAN MICROTUBULE-ASSOCIATED PROTEIN TAU 278-305 PTAU2_HUMAN MICROTUBULE-ASSOCIATED PROTEIN TAU, FETAL 211-238 PTCO1_HUMAN TRANSCOBALAMIN I PRECURSOR 201-241 330-357 PTCP1_HUMAN T-COMPLEX PROTEIN 1 (TCP-1) 316-343 PTDT_HUMAN DNA NUCLEOTIDYLEXOTRANSFERASE (EC 2.7.7.31) 61-95 (TERMINAL ADDITION ENZYME) PTEK_HUMAN RECEPTOR TYROSINE-PROTEIN KINASE TEK PRECURSOR 644-678 969-996 1007-1036 (EC 2.7.1.112) (HPK-6) PTF2B_HUMAN TRANSCRIPTION INITIATION FACTOR 11B (FT11B) 135-162 PTFE3_HUMAN TRANSCRIPTION FACTOR E3 (FRAGMENT) 43-70 122-149 178-226 PTFS2_HUMAN TRANSCRIPTION ELONGATION FACTOR S-II 29-56 PTF_HUMAN TISSUE FACTOR PRECURSOR (TF) (COAGULATION FACTOR III) 148-175 PTGF1_HUMAN TRANSFORMING GROWTH FACTOR BETA 1 PRECURSOR 148-185 (TGF-BETA 1) PTGF2_HUMAN TRANSFORMING GROWTH FACTOR BETA 2 PRECURSOR 243-270 (TGF-BETA 2) (GLIOBLASTO PTGFA_HUMAN TRANSFORMING GROWTH FACTOR ALPHA PRECURSOR  87-114 (TGF-ALPHA) (EGF-LIKE TGR PTGLK_HUMAN PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE K 258-285 (EC 2.3.2.13) PTHBS_HUMAN THROMBOSPONDIN PRECURSOR 110-165 284-314 PTHIK_HUMAN 3-KETOACYL-COA THIOLASE PEROXISOMAL PRECURSOR 185-212 (EC 2.3.1.16) (BETA- PTKNB_HUMAN PROTACHYKININ BETA PRECURSOR (CONTAINS: 11-38 SUBSTANCE P, NEUROKININ A PTLE1_HUMAN TRANSDUCIN-LIKE ENHANCER PROTEIN 1 626-653 PTLE2_HUMAN TRANSDUCIN-LIKE ENHANCER PROTEIN 2  94-125 PTLE4_HUMAN TRANSDUCIN-LIKE ENHANCER PROTEIN 4 (FRAGMENT) 304-331 PTOPA_HUMAN DNA TOPOISOMERASE II, ALPHA ISOZYME (EC 5.99.1.3) 19-46 503-532 PTOPB_HUMAN DNA TOPOISOMERASE II, BETA ISOZYME (EC 5.99.1.3) 35-65 616-647 PTPM3_HUMAN TROPOMYOSIN, FIBROBLAST ISOFORM TM3 16-74  82-116 PTPMA_HUMAN TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE 16-43 47-74  82-116 147-174 191-237 243-277 PTPMB_HUMAN TROPOMYOSIN BETA CHAIN, SKELETAL MUSCLE  37-116 193-240 PTPMC_HUMAN TROPOMYOSIN ALPHA CHAIN, CARDIAC MUSCLE 16-74  82-116 193-277 PTPMF_HUMAN TROPOMYOSIN, FIBROBLAST AND EPITHELIAL MUSCLE-TYPE  37-116 210-240 243-270 (TM36) (TME1) PTPMG_HUMAN TROPOMYOSIN, FIBROBLAST NON-MUSCLE TYPE (TM30PL) 46-80 111-138 158-199 207-234 PTPM1_HUMAN TROPOMYOSIN, CYTOSKELETAL TYPE (TM30NM) 46-80 111-138 172-199 PTPMS_HUMAN TROPOMYOSIN ALPHA CHAIN, SMOOTH MUSCLE (FRAGMENT) 25-59 147-178 PTPP2_HUMAN TRIPEPTIDYL-PEPTIDASE II (EC 3.4.14.10) (TPP II) 153-187 1004-1031 1160-1187 (TRIPEPTIDYL PTPR_HUMAN TPR ONCOGENE (FRAGMENT)  82-147 PTR36_HUMAN TREB36 PROTEIN 18-45 242-269 PTRFR_HUMAN THYROTROPIN-RELEASING HORMONE RECEPTOR (TRH-R) 349-383 (THYROLIBERIN PTRIC_HUMAN TROPONIN I, CARDIAC MUSCLE 36-63 PTRKA_HUMAN HIGH AFFINITY NERVE GROWTH FACTOR RECEPTOR 66-93 117-148 PRECURSOR (EC 2.7.1.112) PTRSR_HUMAN TRANSFERRIN RECEPTOR PROTEIN (TR) (ANTIGEN CD71) 188-215 366-393 (T9) PTSHR_HUMAN THYROTROPIN RECEPTOR PRECURSOR (TSH-R)  87-117 420-447 PTTK_HUMAN PROTEIN KINASE TKK (EC 2.7.1.-) 170-197 324-359 510-544 549-583 PTYK2_HUMAN NON-RECEPTOR TYROSINE-PROTEIN KINASE TYK2 150-177 (EC 2.7.1.112) PUBA1_HUMAN UBIQUITIN-ACTIVATING ENZYME E1 (A1S9 PROTEIN) 448-475 PUBF1_HUMAN NUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDING 227-254 FACTOR 1) (UBF-1) PUDP0_HUMAN UDP-GLUCURONOSYLTRANSFERASE PRECURSOR MICROSOMAL (EC 2.4.1.17) PUFO_HUMAN RECEPTOR TYROSINE-PROTEIN KINASE UFO PRECURSOR 488-522 (EC 2.7.1.112) PUSF1_HUMAN UPSTREAM STIMULATORY FACTOR 1 251-295 PVATC_HUMAN VACULAR ATP SYNTHASE SUBUNIT C (EC 3.6.1.34) 47-74 117-147 (V-ATPASE C SUBUNIT) PVIL1_HUMAN VILLIN 338-372 427-461 717-744 PVIME_HUMAN VIMENTIN 119-146 233-260 PVINC_HUMAN VINCULIN 108-135 PVPRT_HUMAN RETROVIRUS-RELATED PROTEASE (EC 3.4.23.-)  95-134 PWEE1_HUMAN WEE1-LIKE PROTEIN KINASE (EC 2.7.1.112) 354-388 PWT1_HUMAN WILMS' TUMOR PROTEIN (WT33) 247-274 PXBP1_HUMAN X BOX BINDING PROTEIN-1 (XBP-1) (TREB5 PROTEIN)  97-135 PXPAC_HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-A CELLS 180-211 (XERODERMA PIGMENTOSUM PXPCC_HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-C CELLS 134-168 701-728 (XERODERMA PIGMENTOSUM PXPDC_HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-D CELLS 264-291 (XERODERMA PIGMENTOSUM PXPGC_HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-G CELLS  83-110 715-766 1047-1081 (XERODERMA PIGMENTOSUM PXRCC_HUMAN DNA-REPAIR PROTEIN XRCC1 23-57 PZN10_HUMAN ZINC FINGER PROTEIN 10 (ZINC FINGER PROTEIN KOX1) 29-56 (FRAGMENT) PZN40_HUMAN ZINC FINGER PROTEIN 40 (HUMAN IMMUNODEFICIENCY 17-62 307-334 1071-1098 1469-1500 2013-2057 2146-2180 VIRUS TYPE I ENHANCER- PZN45_HUMAN ZINC FINGER PROTEIN 45 (BRC1744) (FRAGMENT)  3-30 201-228 PZN46_HUMAN ZINC FINGER PROTEIN 46 (ZINC FINGER PROTEIN KUP) 121-149

TABLE X Search Results Summary for PCTLZIP, P1CTLZIP, and P2CTLZIP Motifs PCTLZIP P1CTLZIP P2CTLZIP LIBRARY FILE LIBRARY FILE LIBRARY FILE PENV_FOAMV 481-496 PENV_BIV06 434-450 PENV_BIV06 525-542 PENV_HV1MA 438-453 PENV_BIV27 463-479 PENV_BIV27 554-571 PENV_HV1MF 183-198 PENV_FOAMV 481-496 864-880 PENV_FENV1 30-47 630-647 PENV_HV1RH 445-460 PENV_HV1KB 752-768 PENV_FIVPE 781-798 PENV_HV1SC 186-201 PENV_HV1MA 437-453 PENV_FIVSD 779-796 PENV_HV1Z2 123-138 PENV_HV1MF 183-198 PENV_FIVT2 780-797 PENV_HV1ZH 438-453 PENV_HV1RH 444-460 PENV_FLVC6 38-55 624-641 PENV_HV2BE 750-765 PENV_HV1S1 738-754 PENV_FLVGL 605-622 PENV_HV2D1 741-756 PENV_HV1SC 186-201 PENV_FLVLB 625-642 PENV_HV2G1 741-756 PENV_HV1Z2 123-138 PENV_FLVSA 602-619 PENV_HV2NZ 742-757 PENV_HV1Z3 117-133 PENV_FOAMV 710-727 957-974 PENV_HV2RO 751-766 PENV_HV1ZH 437-453 PENV_FSVGA 625-642 PENV_HV2SB 743-758 PENV_HV2BE 750-765 PENV_FSVGB 605-622 PENV_HV2ST 745-760 PENV_HV2D1 741-756 PENV_FSVSM 608-625 PENV_JSRV 104-119 PENV_HV2G1 741-756 PENV_HV1OY 123-140 PENV_MMTVB 618-633 PENV_HV2NZ 742-757 PENV_HV1Z2 410-427 PENV_MMTVG 618-633 PENV_HV2RO 751-766 PENV_HV1Z3 154-171 PENV_SIVMK 139-154 PENV_HV2SB 743-758 PENV_HV2CA 750-767 PENV_SIVML 139-154 PENV_HV2ST 745-760 PENV_MCFF 600-617 PHEMA_CVBLY 391-406 PENV_JSRV 104-119 541-557 PENV_MCFF3 601-618 PHEMA_CVBM 391-406 PENV_MCFF 397-413 PENV_MLVAV 630-647 PHEMA_CVBQ 391-406 PENV_MCFF3 397-413 PENV_MLVCB 625-642 PHEMA_CVHOC 391-406 PENV_MLVAV 427-443 PENV_MLVF5 639-656 PHEMA_CVMA5 402-417 PENV_MLVCB 422-438 PENV_MLVFF 639-656 PHEMA_CVMS 403-418 PENV_MLVHO 423-439 PENV_MLVFP 639-656 PHEMA_INBAA 295-310 PENV_MLVMO 426-442 PENV_MLVHO 626-643 PHEMA_INBBE 303-318 PENV_MLVRD 424-440 PENV_MLVKI 167-184 PHEMA_INBBO 293-308 PENV_MLVRK 424-440 PENV_MLVMO 629-646 PHEMA_INBEN 301-316 PENV_MMTVB 618-633 PENV_MLVRD 624-641 PHEMA_INBFU 286-301 PENV_MMTVG 618-633 PENV_MLVRK 624-641 PHEMA_INBGL 296-311 PENV_SFV1 864-880 PENV_MSVFB 170-187 PHEMA_INBHK 293-308 PENV_SFV3L 861-877 PENV_RMCFV 603-620 PHEMA_INBIB 288-303 PENV_SIVGB 93-109 PENV_SFV1 710-727 957-974 PHEMA_INBID 299-314 PENV_SIVMK 139-154 802-818 PENV_SFV3L 707-724 954-971 PHEMA_INBLE 302-317 PENV_SIVML 139-154 801-817 PENV_SIVM1 766-783 PHEMA_INBMD 292-307 PENV_SIVS4 806-822 PENV_SIVMK 765-782 PHEMA_INBME 296-311 PENV_SIVSP 810-826 PENV_SIVML 764-781 PHEMA_INBNA 288-303 PHEMA_CDVO 36-52 PENV_SIVS4 769-786 PHEMA_INBOR 301-316 PHEMA_CVBLY 391-406 PENV_SIVSP 773-790 PHEMA_INBSI 301-316 PHEMA_CVBM 391-406 PENV_SMRVH 536-553 PHEMA_INBSJ 296-313 PHEMA_CVBQ 391-406 PENV_SMSAV 42-59 PHEMA_INBUS 294-309 PHEMA_CVHOC 391-406 PHEMA_CDVO 36-53 200-217 PHEMA_INBVI 296-311 PHEMA_CVMA5 402-417 PHEMA_CVBLY 391-408 PHEMA_INBVK 303-318 PHEMA_CVMS 403-418 PHEMA_CVBM 391-408 PHEMA_INBYB 286-301 PHEMA_IAAIC 237-253 PHEMA_CVBQ 391-408 PHEMA_MUMPM 133-148 PHEMA_IABAN 221-237 PHEMA_CVHOC 391-408 PHEMA_MUMPR 133-148 PHEMA_IABUD 234-250 PHEMA_IAAIC 322-339 PHEMA_MUMPS 133-148 PHEMA_IACKA 234-250 PHEMA_IABAN 306-323 PHEMA_PI1HW 345-360 PHEMA_IACKG 231-247 PHEMA_IABUD 320-337 PHEMA_PI2H 65-80 PHEMA_IACKV 230-246 PHEMA_IACKA 320-337 PHEMA_PI2HT 65-80 PHEMA_IADA1 234-250 PHEMA_IACKG 316-333 PHEMA_RINDK 368-383 PHEMA_IADA3 237-253 PHEMA_IACKP 302-319 PHEMA_SV5 7-94 PHEMA_IADCZ 234-250 PHEMA_IACKQ 302-319 PHEMA_SV5CM 7-94 PHEMA_IADH1 221-237 PHEMA_IACKS 319-336 PHEMA_SV5CP 7-94 PHEMA_IADH2 221-237 PHEMA_IACKV 315-332 PHEMA_SV5LN 7-94 PHEMA_IADH3 221-237 PHEMA_IADA1 320-337 PVENV_DHVI1 42-57 PHEMA_IADH4 221-237 PHEMA_IADA3 322-339 PVFP7_CAPVK 89-104 PHEMA_IADH5 221-237 PHEMA_IADCZ 320-337 PVFUS_VACC6 72-87 PHEMA_IADH6 221-237 PHEMA_IADH1 306-323 PVGO1_BPP22 242-257 PHEMA_IADH7 221-237 PHEMA_IADH2 306-323 PVGO1_HSVEB 169-184 PHEMA_IADM2 237-253 PHEMA_IADH3 306-323 PVGO1_HSVI1 210-225 317-332 PHEMA_IADNZ 234-250 PHEMA_IADH4 306-323 PVGO6_BPT4 184-199 PHEMA_IAEN6 221-237 PHEMA_IADH6 306-323 PVGO7_BPT4 885-900 PHEMA_IAEN7 237-253 PHEMA_IADH7 306-323 PVGO8_HSVI1 134-149 PHEMA_IAFPR 230-246 PHEMA_IADM2 322-339 PVG10_BPPH2 183-198 PHEMA_IAHAL 236-252 PHEMA_IADNZ 320-337 PVG10_BPPZA 183-198 PHEMA_IAHAR 235-251 PHEMA_IADU3 322-339 PVG10_HSVSA 109-124 PHEMA_IAHC6 230-246 PHEMA_IAEN6 306-323 PVG16_BPP1 81-96 PHEMA_IAHC7 230-246 PHEMA_IAEN7 322-339 PVG18_BPT4 468-483 PHEMA_IAHCD 230-246 PHEMA_IAFPR 315-332 PVG25_BPT4 97-112 PHEMA_IAHDE 230-246 PHEMA_IAGRE 320-337 PVG29_HSVI1 20-35 PHEMA_IAHFO 236-252 PHEMA_IAGU2 320-337 PVG30_BPPH8 11-94 PHEMA_IAHK6 236-252 PHEMA_IAGUA 319-336 PVG36_BPOX2 22-37 PHEMA_IAHK7 236-252 PHEMA_IAHAL 321-338 PVG36_HSVSA 108-123 PHEMA_IAHLE 230-246 PHEMA_IAHC6 315-332 PVG37_BPT2 1253-1268 PHEMA_IAHLO 230-246 PHEMA_IAHC7 315-332 PVG37_HSVI1 284-299 PHEMA_IAHMI 236-252 PHEMA_IAHCD 315-332 PVG55_HSVI1 22-37 143-158 PHEMA_IAHNM 236-252 PHEMA_IAHDE 315-332 PVG56_HSVI1 268-283 PHEMA_IAHRO 236-252 PHEMA_IAHFO 321-338 PVG56_HSVI1 102-117 PHEMA_IAHSA 236-252 PHEMA_IAHK6 321-338 PVG59_HSVI1 267-282 PHEMA_IAHSP 230-246 PHEMA_IAHK7 321-338 PVG65_HSVI1 518-533 PHEMA_IAHSW 230-246 PHEMA_IAHLE 315-332 PVG9_BPPH2 234-249 PHEMA_IAHTE 236-252 PHEMA_IAHLO 315-332 PVG9_BPPZA 234-249 PHEMA_IAHTO 236-252 PHEMA_IAHMI 321-338 PVG9_SPV1R 57-72 PHEMA_IAHUR 236-252 PHEMA_IAHNM 321-338 PVGF_BPPHX 234-249 PHEMA_IAKIE 235-251 PHEMA_IAHNN 815-332 PVGL2_CVBF 264-279 PHEMA_IALEN 235-251 PHEMA_IAHPR 315-332 PVGL2_CVBL9 264-279 PHEMA_IAMAA 233-249 PHEMA_IAHRO 321-338 PVGL2_CVBLY 264-279 PHEMA_IAMAB 238-254 PHEMA_IAHSA 321-338 PVGL2_CVBM 264-279 PHEMA_IAMAO 237-253 PHEMA_IAHSP 315-332 PVGL2_CVBQ 264-279 PHEMA_IAME1 237-253 PHEMA_IAHSW 315-332 PVGL2_CVBV 264-279 PHEMA_IAME2 237-253 PHEMA_IAHTE 321-338 PVGL2_CVPFS 442-457 PHEMA_IAME6 221-237 PHEMA_IAHTO 321-338 PVGL2_CVPPU 440-455 504-519 PHEMA_IAMIN 85-101 231-247 PHEMA_IAHUR 321-338 PVGL2_CVPR8 218-233 PHEMA_IANT6 237-253 PHEMA_IAJAP 317-334 PVGL2_CVPRM 218-233 PHEMA_IAQU7 221-237 PHEMA_IAMAA 319-336 PVGL2_IBV6 1056-1071 PHEMA_IARUD 234-250 PHEMA_IAMAB 324-341 PVGL2_IBVB 1055-1070 PHEMA_IASE2 234-250 PHEMA_IAMAO 322-339 PVGL2_IBVD2 1056-1071 PHEMA_IASH2 234-250 PHEMA_IAME1 322-339 PVGL2_IBVK 1055-1070 PHEMA_IASTA 230-246 PHEMA_IAME2 322-339 PVGL2_IBVM 1055-1070 PHEMA_IATAI 235-251 PHEMA_IAME6 306-323 PVGLB_HSVBA 701-716 PHEMA_IATKM 234-250 PHEMA_IAMIN 316-333 PVGLB_PRVIF 203-216 PHEMA_IATKO 233-249 PHEMA_IANT6 322-339 PVGLC_HSVBC 475-490 PHEMA_IATKR 230-246 PHEMA_IAPIL 320-337 PVGLC_HSVE4 444-459 PHEMA_IATKW 229-245 PHEMA_IAQU7 306-323 PVGLC_HSVEB 427-442 PHEMA_IAUDO 237-253 PHEMA_IARUD 320-337 PVGLC_PRVIF 446-461 PHEMA_IAUSS 235-251 PHEMA_IASE2 320-337 PVGLD_HSV11 79-94 PHEMA_IAVI7 238-254 PHEMA_IASH2 321-338 PVGLD_HSV2 79-94 PHEMA_IAXIA 235-251 PHEMA_IASTA 315-332 PVGLF_BRSVA 265-280 PHEMA_IAZCO 237-253 PHEMA_IATKM 320-337 PVGLF_BRSVC 265-280 PHEMA_IAZH2 221-237 PHEMA_IAUDO 322-339 380-397 PVGLF_BRSVR 265-280 PHEMA_IAZH3 221-237 PHEMA_IAVI7 323-340 PVGLF_HRSV1 265-280 PHEMA_IAZUK 237-253 PHEMA_IAZCO 322-339 PVGLF_HRSVA 265-280 PHEMA_INBAA 115-131 295-310 PHEMA_IAZH2 306-323 PVGLF_HRSVL 265-280 PHEMA_INBBE 123-139 303-318 PHEMA_IAZH3 306-323 PVGLF_HRSVR 265-280 PHEMA_INBBO 116-132 293-308 PHEMA_IAZUK 322-339 PVGLF_MUMPS 5-94 PHEMA_INBEN 123-139 301-316 PHEMA_MUMPM 101-118 PVGLI_VZVD 278-293 PHEMA_INBFU 108-124 286-301 PHEMA_MUMPR 101-118 PVGLM_HANTB 900-915 PHEMA_INBGL 119-135 296-311 PHEMA_MPMPS 101-118 PVGLM_PTPV 743-758 PHEMA_INBHK 116-132 293-308 PHEMA_NDVA 93-110 PVGLM_SEOUR 901-916 PHEMA_INBIB 108-124 288-303 PHEMA_NDVB 93-110 PVGLM_SEOUS 900-915 PHEMA_INBID 120-136 299-314 PHEMA_NDVD 93-110 PVGLY_LASSG 426-441 PHEMA_INBLE 123-139 302-317 PHEMA_NDVH 93-110 PVGLY_LASSJ 427-442 PHEMA_INBMD 113-129 292-307 PHEMA_NDVI 93-110 PVGLY_MOPEI 425-440 PHEMA_INBME 116-132 296-311 PHEMA_NDVM 93-110 PVM3_REOVD 521-536 PHEMA_INBNA 108-124 288-303 PHEMA_NDVQ 93-110 PVMSA_HPBGS 380-395 PHEMA_INBOR 123-139 301-316 PHEMA_NDVTG 93-110 PVMSA_HPBV9 187-202 PHEMA_INBSI 123-139 301-316 PHEMA_NDVU 93-110 PVMSA_WHV1 378-393 PHEMA_INBSJ 119-135 298-313 PHEMA_PHODV 36-53 PVMSA_WHV59 383-398 PHEMA_INBUS 116-132 294-309 PHEMA_PI1HW 486-503 PVMSA_WHV7 383-398 PHEMA_INBVI 116-132 296-311 PHEMA_PI3B 111-128 PVMSA_WHV8 383-398 PHEMA_INBVK 123-139 303-318 PHEMA_PI3H4 111-128 PVMSA_WHV8I 383-398 PHEMA_INBYB 108-124 286-301 PHEMA_PI3HA 111-128 PVMSA_WHVW6 234-249 PHEMA_MUMPM 133-148 PHEMA_PI3HT 111-128 PVMT2_IAANN 25-40 PHEMA_MUMPR 133-148 PHEMA_PI3HU 111-128 PVMT2_IABAN 25-40 PHEMA_MUMPS 133-148 PHEMA_PI3HV 111-128 PVMT2_IAFOW 25-40 PHEMA_PI1HW 345-360 PHEMA_PI3HW 111-128 PVMT2_IAFPR 25-40 PHEMA_FI2H 65-81 PHEMA_PI3HX 111-128 PVMT2_IAFPW 25-40 PHEMA_PI2HT 65-81 PHEMA_PI4HA 50-67 PVMT2_IALE1 25-40 PHEMA_PI3B 324-340 PHEMA_SV41 85-102 PVMT2_IALE2 25-40 PHEMA_PI3H4 324-340 PHEMA_SV5 84-101 PVMT2_IAMAN 25-40 PHEMA_PI3HA 324-340 PHEMA_SV5CM 84-101 PVMT2_IAPUE 25-40 PHEMA_PI3HT 324-340 PHEMA_SV5CP 84-101 PVMT2_IASIN 25-40 PHEMA_PI3HU 324-340 PHEMA_SV5LN 84-101 PVMT2_IAUDO 25-40 PHEMA_PI3HV 324-340 PVFO5_VACCC 280-297 PVMT2_IAWIL 25-40 PHEMA_PI3HW 324-340 PVFO5_VACCP 280-297 PVMT9_MYXVL 226-241 PHEMA_PI3HX 324-340 PVFO5_VACCV 281-298 PHEMA_RINDK 368-383 PVFO9_VACCC 176-193 PHEMA_SV5 7-94 PVFO9_VACCV 176-193 PHEMA_SV5CM 7-94 PVG27_HSVSA 209-226 PHEMA_SV5CP 7-94 PVG28_HSVI1 173-190 PHEMA_SV5LN 7-94 PVG39_HSVI1 648-665 PVENV_DHVI1 42-57 PVG43_HSVI1 109-126 521-538 PVENV_EAV 25-41 PVG67_HSVI1 171-188 PVFP2_FOWPV 88-104 PVG72_HSVI1 1252-1269 PVFP7_CAPVK 89-104 PVGF1_IBVB 3073-3090 PVFUS_VACC6 72-87 PVGL2_IBV6 1094-1111 PVGO1_HSVEB 169-184 PVGLB_HSVE1 736-753 PVGO1_HSVI1 209-225 317-332 PVGLB_HSVE4 675-692 PVGO8_HSVI1 134-149 PVGLB_HSVEA 736-753 PVG10_HSVSA 109-124 PVGLB_HSVEB 736-753 PVG11_HSVI1 103-119 PVGLB_HSVEL 736-753 PVG12_HSVI1 270-286 PVGLB_ILTV6 597-614 PVG1_SPV1R 76-92 PVGLB_ILTV5 607-624 PVG29_HSVI1 20-35 PVGLB_ILTVT 607-624 PVG86_BPOX2 22-37 PVGLC_PRVIF 180-197 PVG36_HSVSA 108-123 PVGLE_VZVD 469-486 PVG37_HSVI1 284-299 PVGLF_SV5 401-418 PVG41_HSVI1 244-260 PVGLH_HCMVA 365-382 PVG46_HSVI1 1244-1260 PVGLH_HCMVT 364-381 PVG55_HSVI1 22-37 143-158 PVGLH_HSV11 245-262 803-820 PVG56_HSVI1 268-283 PVGLH_HSV1E 245-262 803-820 PVG58_HSVI1 101-117 PVGLI_HSV11 43-60 PVG58_HSVSA 130-146 330-346 PVGLM_BUNL7 81-98 PVG59_HSVI1 267-282 PVGLM_BUNSH 81-98 PVG65_HSVI1 362-378 518-533 PVGLM_PUUMH 712-729 PVG71_HSVSA 89-105 PVGLM_PUUMS 712-729 PVG9_BPPH2 234-249 PVGLM_RVFV 344-361 PVG9_BPPZA 234-249 PVGLM_RVFVZ 344-361 PVG9_SPV1R 57-72 PVGLY_LASSG 12-94 PVGF1_IBVB 2210-2226 PVGLY_LASSJ 12-94 PVGL2_CVBF 123-139 174-190 264-279 PVGLY_LYCVA 12-94 PVGL2_CVBL9 123-139 174-190 264-279 PVGLY_LYCVW 12-94 PVGL2_CVBLY 123-139 174-190 264-279 PVGLY_MOPEI 12-94 PVGL2_CVBM 123-139 174-190 264-279 PVM1_REOVD 280-297 PVGL2_CVBQ 31-47 123-139 174-190 264-279 PVM1_REOVL 280-297 PVGL2_CVBV 123-139 174-190 264-279 PVMAT_CDVO 148-165 PVGL2_CVM4 95-111 1267-1283 PVMAT_MEASI 87-104 PVGL2_CVMA5 95-111 1215-1231 PVMP_CAMVC 147-164 PVGL2_CVMJH 95-111 1126-1142 PVMP_CAMVD 147-164 PVGL2_CVPFS 442-457 800-818 1274-1290 PVMP_CAMVE 147-164 PVGL2_CVPPU 440-455 504-519 798-814 1272-1288 PVMP_CAMVN 147-164 PVGL2_CVPR8 218-233 576-592 1050-1066 PVMP_CAMVS 147-164 PVGL2_CVPRM 218-233 576-592 1050-1066 PVMP_CAMVW 147-164 PVGL2_FIPV 803-819 1277-1293 PVMSA_HPBVO 11-94 PVGL2_IBV6 1056-1071 PVMSA_HPBV2 185-202 PVGL2_IBVB 1055-1070 PVMSA_HPBV4 185-202 PVGL2_IBVD2 1056-1071 PVMSA_HPBVA 174-191 PVGL2_IBVK 1055-1070 PVMSA_HPBVD 11-94 PVGL2_IBVM 1055-1070 PVMSA_HPBVJ 174-191 PVGLB_HSVSA 701-716 PVMSA_HPBVL 174-191 PVGLB_PRVIF 203-218 PVMSA_HPBVN 11-94 PVGLB_VZVD 522-538 PVMSA_HPBVO 174-191 PVGLC_HSVBC 475-490 PVMSA_HPBVP 185-202 PVGLC_HSVE4 444-459 PVMSA_HPBVR 185-202 PVGLC_HSVEB 427-442 PVMSA_HPBVS 11-94 PVGLC_PRVIF 446-461 PVMSA_HPBVW 174-191 PVGLC_VZVD 150-166 PVMSA_HPBVY 174-191 PVGLC_VZVS 150-166 PVMSA_HPBVZ 174-191 PVGLD_HSV11 79-94 PVMT2_IAANN 25-42 PVGLD_HSV2 79-94 PVMT2_IABAN 25-42 PVGLE_PRVRI 3-94 PVMT2_IAFOW 25-42 PVGLF_BRSVA 205-221 265-280 PVMT2_IAFPR 25-42 PVGLF_BRSVC 205-221 265-280 PVMT2_IAFPW 25-42 PVGLF_BRSVR 205-221 265-280 PVMT2_IALE1 25-42 PVGLF_COVO 398-414 PVMT2_IALE2 25-42 PVGLF_HRSV1 205-221 265-280 PVMT2_IAMAN 25-42 PVGLF_HRSVA 205-221 265-280 PVMT2_IAPUE 25-42 PVGLF_HRSVL 205-221 265-280 PVMT2_IASIN 25-42 PVGLF_HRSVR 205-221 265-280 PVMT2_IAUDO 25-42 PVGLF_MEASE 286-302 PVMT2_IAWIL 25-42 PVGLF_MEASI 289-305 PVGLF_MEASY 286-302 PVGLF_MUMPM 276-292 PVGLF_MUMPR 276-292 PVGLF_MUMPS 5-94 276-292 PVGLF_NDVA 273-289 PVGLF_NDVB 273-289 PVGLF_NDVM 273-289 PVGLF_NDVT 273-289 PVGLF_NDVTG 273-289 PVGLF_NDVU 273-289 PVGLF_PHODV 269-285 367-383 PVGLF_RINDK 282-298 PVGLF_RINDL 282-298 PVGLF_TRTV 175-191 PVGLI_VZVD 278-293 PVGLM_HANTB 355-371 900-915 PVGLM_HANTH 499-515 PVGLM_HANTL 499-515 PVGLM_HANTV 499-515 PVGLM_PTPV 743-758 PVGLM_PUUMH 509-525 PVGLM_PUUMS 509-525 PVGLM_SEOUR 355-371 901-916 PVGLM_SEOUS 355-371 900-915 PVGLM_UUK 826-842 PVGLP_BEV 869-885 PVGLY_LASSG 12-94 426-441 PVGLY_LASSJ 12-94 427-442 PVGLY_LYCVA 12-94 PVGLY_LYCVW 12-94 PVGLY_MOPEI 12-94 425-440 PVGLY_PIARV 12-94 PVGNM_CPMV 1021-1037 PVM3_REOVD 521-536 PVMAT_MUMPS 191-207 PVMAT_NDVA 135-151 PVMAT_NDVB 135-151 PVMAT_PI2HT 189-205 PVMAT_SV41 189-205 PVMAT_SV5 98-114 132-148 PVMP_CAMVC 118-134 PVMP_CAMVD 118-134 PVMP_CAMVE 118-134 PVMP_CAMVN 118-134 PVMP_CAMVS 118-134 PVMP_CAMVW 118-134 PVMP_FMVD 115-131 PVMSA_HPBGS 380-395 PVMSA_HPBV9 187-202 PVMSA_WHV1 378-393 PVMSA_WHV59 383-398 PVMSA_WHV7 383-398 PVMSA_WHV8 383-398 PVMSA_WHV8I 383-398 PVMSA_WHVW6 234-249 PVMT2_IAANN 25-40 PVMT2_IABAN 25-40 PVMT2_IAFOW 25-40 PVMT2_IAFPR 25-40 PVMT2_IAFPW 25-40 PVMT2_IALE1 25-40 PVMT2_IALE2 25-40 PVMT2_IAMAN 25-40 PVMT2_IAPUE 25-40 PVMT2_IASIN 25-40 PVMT2_IAUDO 25-40 PVMT2_IAWIL 25-40 PVMT9_MYXVL 226-241

TABLE XI Search Results Summary for P3CTLZIP, P4CTLZIP, P5CTLZIP, and P6CTLZIP Motifs P3CTLZIP P4CTLZIP P5CTLZIP P6CTLZIP LIBRARY FILE LIBRARY FILE LIBRARY FILE LIBRARY FILE PENV_BIV27 147-165 PENV1_FRSFV 380-399 PENV1_FRSFV 380-400 PENV_BIVO6 47-68 525-546 PENV_CAEVC 810-828 PENV_AVISU 98-117 PENV2_FRSFV 380-400 PENV_BIV27 47-68 147-168 564-575 PENV_CAEVG 808-826 PENV_BIV27 147-166 PENV_BAEVM 170-190 PENV_FENV1 225-246 630-651 PENV_HV2BE 750-768 PENV_HV1ZH 123-142 PENV_FIVPE 781-801 PENV_FLVC6 624-645 PENV_HV2D1 741-759 PENV_HV2D2 9-29 PENV_FIVSD 779-799 PENV_FLVGL 447-468 605-626 PENV_HV2G1 741-759 PENV_HV2SB 778-797 PENV_FIVT2 780-800 PENV_FLVLB 467-488 625-646 PENV_HV2NZ 742-760 PENV_JSRV 541-560 PENV_FLVGL 9-29 PENV_FLVSA 444-465 602-623 PENV_HV2RO 751-769 PENV_RSVP 533-552 PENV_FOAMV 255-275 924-944 PENV_FOAMV 153-174 957-978 PENV_HV2SB 743-761 PHEMA_VACCC 173-192 PENV_FSVGA 9-29 PENV_FSVGA 467-488 625-646 PENV_HV2ST 745-763 PHEMA_VACCI 173-192 PENV_HV1C4 428-448 PENV_FSVGB 447-468 605-626 PENV_JSRV 376-394 PHEMA_VACCT 173-192 PENV_HV2CA 750-770 PENV_FSVSM 450-471 608-629 PHEMA_PI2H 118-136 PHEMA_VACCV 173-192 PENV_MLVF5 400-420 PENV_FSVST 467-488 PHEMA_PI2HT 118-136 PVENV_BEV 62-81 PENV_MMTVB 643-663 PENV_GALV 52-73 519-540 PHEMA_SV41 55-73 PVENV_MCV1 61-80 PENV_MMTVG 643-663 PENV_HV2BE 750-771 PVENV_THOGV 473-491 PVENV_MCV2 61-80 PENV_OMVVS 75-95 PENV_HV2G1 741-702 PVG16_BPP22 83-101 PVFUS_ORFNZ 29-48 PENV_RSVP 42-62 PENV_HV2NZ 742-763 PVG24_BPT4 115-133 PVGO1_HSVEB 169-188 PENV_SFV1 924-944 PENV_HV2RO 751-772 PVG36_HSVSA 344-362 PVGO1_VACCC 376-395 PENV_SFV3L 921-941 PENV_HV2ST 745-766 PVG40_HSVI1 14-32 PVGO1_VACCV 315-334 PENV_SIVM1 766-786 PENV_MCFF 600-621 PVG50_HSVSA 5-94 PVGO1_VARV 376-395 PENV_SIVMK 765-785 PENV_MCFF3 601-622 PVG51_BPT4 63-81 PVGO6_BPT4 627-646 PENV_SIVML 764-784 PENV_MLVAV 630-651 PVG51_HSVI1 84-102 PVG10_HSVI1 35-54 PENV_SIVS4 769-789 PENV_MLVCB 625-646 PVG65_HSVI1 155-173 PVG11_HSVI1 103-122 150-169 PENV_SIVSP 773-793 PENV_MLVF5 639-660 PVGF1_IBVB 2788-2806 3374-3392 PVG1_BPPH2 31-50 PHEMA_CDVO 493-513 PENV_MLVFF 639-660 PVGL2_CVH22 1053-1071 PVG1_SPV1R 659-678 PHEMA_CVBLY 391-411 PENV_MLVFP 639-660 PVGL2_IBV6 1056-1074 PVG20_BPT4 231-250 PHEMA_CVBM 391-411 PENV_MLVHO 626-647 PVGL2_IBVB 1055-1073 PVG32_VZVD 90-109 PHEMA_CVBQ 391-411 PENV_MLVKI 167-188 PVGL2_IBVD2 1056-1074 PVG36_BPK3 132-151 PHEMA_CVHOC 391-411 PENV_MLVMO 629-650 PVGL2_IBVK 1055-1073 PVG37_BPT2 19-38 629-648 PHEMA_CVMA5 402-422 PENV_MLVRD 624-645 PVGL2_IBVM 1055-1073 PVG37_BPT4 19-38 625-644 PHEMA_IACKG 81-101 PENV_MLVRK 624-645 PVGLB_HSVB1 560-578 689-707 PVG39_HSVI1 1038-1057 PHEMA_IADMA 81-101 PENV_MSVFB 170-191 PVGLB_HSVBC 692-710 PVG41_HSVI1 62-81 PHEMA_MUMPM 397-417 PENV_RMCFV 603-624 PVGLB_HSVSA 584-602 PVG43_BPPF3 380-399 PHEMA_MUMPR 397-417 PENV_SFV1 957-978 PVGLB_ILTV6 740-758 PVG46_BPPF1 337-356 PHEMA_MUMPS 397-417 PENV_SFV3L 157-178 954-975 PVGLB_ILTVS 750-768 PVG59_HSVI1 142-161 PHEMA_PHODV 493-513 PENV_SIVA1 437-458 PVGLB_ILTVT 750-768 PVG61_HSVI1 117-136 PHEMA_PI1HW 322-342 PENV_SIVAG 442-463 PVGLC_VZVD 431-449 PVG67_HSVI1 318-337 1072-1091 PHEMA_PI2H 13-33 PENV_SIVAI 421-442 PVGLC_VZVS 431-449 PVGF1_IBVB 1587-1606 2108-2127 PHEMA_PI2HT 13-33 PENV_SIVAT 435-456 PVGLF_PI3H4 2-94 PVGL2_CVBF 991-1010 PHEMA_RINDL 497-517 PENV_SMSAV 42-63 PVGLH_HSV6G 314-332 PVGL2_CVBL9 991-1010 PHEMA_SEND5 322-342 PHEMA_CVMA5 402-423 PVGLH_HSVE4 814-832 PVGL2_CVBLY 991-1010 PHEMA_SENDF 322-342 PHEMA_IADE1 266-287 PVGLH_HSVEB 807-825 PVGL2_CVBM 991-1010 PHEMA_SENDH 322-342 PHEMA_MUMPM 225-246 PVGLI_HSV11 5-94 PVGL2_CVBQ 991-1010 PHEMA_SENDJ 322-342 PHEMA_MUMPR 225-246 PVGNM_BPMV 678-696 PVGL2_CVBV 991-1010 PHEMA_SENDZ 322-342 PHEMA_MUMPS 225-246 PVMO1_VACCC 134-152 177-195 PVGL2_CVH22 768-787 1115-1134 PVENV_LELV 27-47 148-168 PHEMA_PHODV 213-234 PVMO1_VACCV 63-101 126-144 PVGL2_CVM4 999-1018 PVENV_THOGV 356-376 PHEMA_PI2H 13-34 PVM1_REOVD 227-245 PVGL2_CVMA5 947-966 PVGO1_VACCC 298-318 PHEMA_PI2HT 13-34 PVM1_REOVL 227-245 PVGL2_CVMJH 858-877 PVGO1_VACCV 237-257 PHEMA_SV5 7-28 379-400 PVMAT_HRSVA 44-62 PVGL2_CVPFS 64-83 1038-1057 PVGO1_VARV 298-318 PHEMA_SV5CM 7-28 379-400 PVMAT_NDVA 190-208 PVGL2_CVPPU 64-83 1036-1055 PVGO6_VACCC 31-51 PHEMA_SV5CP 7-28 379-400 PVMAT_NDVB 190-208 PVGL2_CVPR8 814-833 PVGO6_VARV 31-51 PHEMA_SV5LN 7-28 379-400 PVMP_CAMVC 183-201 PVGL2_CVPRM 814-833 PVGO9_BPPF1 25-45 PVGO1_HSVEB 169-190 PVMP_CAMVD 183-201 PVGL2_FIPV 1041-1060 PVG12_HSVI1 151-171 PVGO1_HSVI1 589-610 PVMP_CAMVE 183-201 PVGL2_IBV6 588-607 771-790 PVG22_HSVI1 300-320 PVG23_HSVI1 314-335 PVMP_CAMVN 183-201 PVGL2_IBVB 587-606 770-789 PVG39_HSVI1 648-668 970-990 PVG37_BPOX2 65-86 PVMP_CAMVS 183-201 PVGL2_IBVD2 588-607 771-790 PVG51_HSVI1 29-49 PVG43_HSVI1 157-178 PVMP_CAMVW 183-201 PVGL2_IBVK 587-606 770-789 PVG63_HSVI1 336-356 PVG55_HSVI1 288-309 PVMP_FMVD 180-198 PVGL2_IBVM 587-606 770-789 PVG65_HSVI1 117-137 PVG55_HSVSA 85-106 PVGLB_HCMVA 706-725 PVG74_HSVSA 124-144 PVG56_HSVI1 1155-1176 PVGLB_HCMVT 707-726 PVGL2_IBV6 328-348 PVG58_HSVSA 266-287 PVGLB_HSV6U 117-136 PVGL2_IBVB 327-347 PVG60_HSVI1 30-51 PVGLB_ILTV6 256-275 PVGL2_IBVD2 328-348 PVG83_HSVI1 238-259 PVGLB_ILTVS 266-285 PVGL2_IBVD3 328-348 PVGF1_IBVB 1856-1877 PVGLB_ILTVT 266-285 PVGL2_IBVK 327-347 PVGH3_HCMVA 157-178 PVGLC_HSV11 3-94 467-486 PVGL2_IBVM 327-347 378-398 PVGL2_CVBF 1259-1280 PVGLC_HSV1K 3-94 467-486 PVGL2_IBVU2 310-330 PVGL2_CVBL9 1259-1280 PVGLC_HSVBC 475-494 PVGLB_EBV 732-752 PVGL2_CVBLY 1259-1280 PVGLG_CHAV 436-455 PVGLB_HCMVA 750-770 PVGL2_CVBM 1259-1280 PVGLG_RABVH 372-391 PVGLB_HCMVT 751-771 PVGL2_CVBQ 1259-1280 PVGLI_HSVEB 44-63 PVGLB_HSV23 79-99 PVGL2_CVBV 1259-1280 PVGLI_VZVD 278-297 PVGLB_HSV2H 79-99 PVGL2_CVM4 1317-1338 PVGLM_BUNGE 117-136 PVGLB_HSV2S 65-85 PVGL2_CVMA5 1265-1286 PVGLM_PHV 152-171 PVGLB_HSV6U 72-92 PVGL2_CVMJH 1176-1197 PVGLM_PTPV 997-1016 PVGLB_HSVB2 279-299 PVGLB_HSV11 83-104 PVGLM_PUUMH 155-174 PVGLB_HSVSA 63-83 PVGLB_HSV1F 82-103 PVGLM_PUUMS 155-174 PVGLB_MCMVS 738-758 PVGLB_HSV1K 82-103 PVGLM_RVFV 830-849 PVGLF_PI3H4 283-303 PVGLB_HSV1P 83-104 PVGLM_RVFVZ 830-849 PVGLG_RABVE 454-474 PVGLB_MCMVS 135-156 PVGLM_UUK 655-674 PVGLG_RABVH 454-474 PVGLC_PRVIF 446-467 PVGLY_LYCVW 89-108 PVGLG_RABVP 454-474 PVGLF_CDVO 336-357 PVGNB_CPMV 1165-1184 PVGLG_RABVS 454-474 PVGLF_MEASE 224-245 PVM3_REOVD 521-540 PVGLG_RABVT 454-474 PVGLF_MEASI 227-248 PVME1_CVBM 171-190 PVGLH_MCMVS 670-690 PVGLF_MEASY 224-245 PVME1_CVH22 136-155 PVGLM_BUNL7 1325-1345 PVGLF_MUMPM 446-467 PVME1_CVPFS 174-193 PVGLM_BUNSH 1325-1345 PVGLF_MUMPR 446-467 PVME1_CVPPU 174-193 PVGLM_BUNYW 996-1016 PVGLF_MUMPS 446-467 PVME1_CVPRM 174-193 PVGLM_HANTB 999-1019 PVGLF_PHODV 305-326 PVME1_CVTKE 171-190 PVGLM_HANTH 1000-1020 PVGLF_PI1HC 456-477 PVGLM_HANTL 1001-1021 PVGLF_PI2H 450-471 PVGLM_HANTV 1001-1021 PVGLF_PI2HG 450-471 PVGLM_RVFVZ 1156-1176 PVGLF_PI2HT 450-471 PVGLM_SEOUR 1000-1020 PVGLF_PI3B 405-426 453-474 PVGLM_SEOUS 999-1019 PVGLF_PI3H4 453-474 PVGLM_UUK 925-945 PVGLF_RINDK 220-241 PVGLY_LYCVA 12-32 PVGLF_RINDL 220-241 PVGLY_LYCVW 12-32 PVGLF_SEND5 460-481 PVGLY_PIARV 12-32 PVGLF_SENDF 460-481 PVGNB_CPMV 141-161 PVGLF_SENDH 460-481 PVMAT_MUMPS 310-330 PVGLF_SENDJ 460-481 PVMAT_NDVA 309-329 PVGLF_SENDZ 460-481 PVMAT_NDVB 309-329 PVGLF_SV41 453-474 PVMAT_PI2HT 308-328 PVGLF_SV5 446-467 PVMAT_PI4HA 312-332 PVGLH_HCMVA 691-712 PVMAT_PI4HB 312-332 PVGLH_HCMVT 690-711 PVMAT_SV41 308-328 PVGLH_HSVE4 304-325 PVMAT_SV5 308-328 PVGLH_HSVEB 297-318 PVME1_IBV6 74-94 PVGLH_HSVSA 658-679 PVME1_IBVB 74-94 PVGLI_HSV2 2-23 PVME1_IBVB2 74-94 PVGLI_HSV23 2-23 PVME1_IBVK 74-94 PVGLM_BUNGE 197-218 PVMSA_HPBDB 201-221 PVGLM_BUNL7 190-211 PVMSA_HPBGS 209-229 PVGLM_BUNSH 190-211 PVMSA_HPBHE 293-313 PVGLM_BUNYW 193-214 PVMSA_WHV1 207-227 PVGLY_LASSG 237-258 PVMSA_WHV59 212-232 PVGLY_LASSJ 238-259 PVMSA_WHV7 212-232 PVGP8_EBV 67-88 PVMSA_WHV8 212-232 PVMO1_VACCC 281-302 PVMSA_WHV8I 212-232 PVMO1_VACCV 230-251 PVMSA_WHVW6 63-83 PVMAT_HRSVA 139-160 PVMAT_RINDK 200-221 239-260 PVMAT_TRTV 122-143 PVME1_CVHOC 64-85 PVMSA_HPBDB 201-222 PVMSA_HPBVO 70-91 PVMSA_HPBV2 244-265 PVMSA_HPBV4 244-265 PVMSA_HPBV9 244-265 PVMSA_HPBVA 233-254 PVMSA_HPBVD 70-91 PVMSA_HPBVI 233-254 PVMSA_HPBVJ 233-254 PVMSA_HPBVL 233-254 PVMSA_HPBVN 70-91 PVMSA_HPBVO 233-254 PVMSA_HPBVP 244-265 PVMSA_HPBVR 244-265 PVMSA_HPBVS 70-91 PVMSA_HPBVW 233-254 PVMSA_HPBVY 233-254 PVMSA_HPBVZ 233-254 PVMT2_IAANN 25-46 PVMT2_IABAN 25-46 PVMT2_IAFOW 25-46 PVMT2_IAFPR 25-46 PVMT2_IAFPW 25-46 PVMT2_IALE1 25-46 PVMT2_IALE2 25-46 PVMT2_IAMAN 25-46 PVMT2_IAPUE 25-46 PVMT2_IASIN 25-46 PVMT2_IAUDO 25-46 PVMT2_IAWIL 25-46

TABLE XII Search Results Summary for P7CTLZIP, P8CTLZIP, and P9CTLZIP Motifs P7CTLZIP P8CTLZIP P9CTLZIP LIBRARY FILE LIBRARY FILE LIBRARY FILE PENV_BAEVM 202-224 PENV1_FRSFV 380-403 PENV_BLVAF 303-327 PENV_HV181 498-520 PENV2_FRSFV 380-403 PENV_BLVAU 303-327 PENV_HV188 493-516 PENV_BIVO6 178-201 PENV_BLVAV 303-327 PENV_HV18N 494-516 PENV_BIV27 207-230 PENV_BLVB2 303-327 PENV_HV1BR 503-525 PENV_FOAMV 864-887 PENV_BLVB6 303-327 PENV_HV1EL 495-517 PENV_HV1Z3 175-198 PENV_BLVJ 303-327 PENV_HV1H2 498-520 PENV_HV2BE 3-26 781-804 PENV_FIVPE 781-805 PENV_HV1H3 498-520 PENV_HV2CA 750-773 PENV_FIVSD 779-803 PENV_HV1J3 510-532 PENV_HV2D1 3-26 772-795 PENV_FIVT2 780-804 PENV_HV1JR 490-512 PENV_HV2G1 772-795 PHEMA_CVBLY 391-415 PENV_HV1KB 504-526 PENV_HV2NZ 777-800 PHEMA_CVBM 391-415 PENV_HV1MA 500-522 PENV_JSRV 541-564 PHEMA_CVBQ 391-415 PENV_HV1MF 496-518 PENV_SFV1 864-887 PHEMA_CVHOC 391-415 PENV_HV1ND 488-510 PENV_SFV3L 861-884 PHEMA_INCCA 442-466 PENV_HV1PV 498-520 PENV_SIVM1 803-826 PHEMA_INCEN 430-454 PENV_HV1S1 489-511 PENV_SIVMK 802-825 PHEMA_INCGL 430-454 PENV_HV1Z2 123-145 495-517 PENV_SIVML 801-824 PHEMA_INCHY 429-453 PENV_HV1Z6 497-519 PENV_SIVS4 806-829 PHEMA_INCJH 443-467 PENV_HV1Z8 505-527 PENV_SIVSP 810-833 PHEMA_INCKY 429-453 PENV_HV1ZH 498-520 PHEMA_CDVO 200-223 PHEMA_INCMI 429-453 PENV_JSRV 376-398 PHEMA_PI2H 65-88 PHEMA_INCNA 429-453 PENV_MPMV 213-235 PHEMA_PI2HT 65-88 PHEMA_INCP1 430-454 PENV_SRV1 213-235 PVF11_VACCC 161-184 PHEMA_INCP2 430-454 PHEMA_IAAIC 37-59 PVF15_VACCC 25-48 PHEMA_INCP3 430-454 PHEMA_IABAN 21-43 PVF16_VACCP 3-26 PHEMA_INCTA 430-454 PHEMA_IADA3 37-59 PVG1L_AMEPV 313-336 PHEMA_INCYA 430-454 PHEMA_IADH2 21-43 PVG28_HSVI1 491-514 PHEMA_MUMPM 101-125 PHEMA_IADH3 21-43 PVG43_HSVI1 322-345 PHEMA_MUMPR 101-125 PHEMA_IADH4 21-43 PVG52_HSVI1 229-252 PHEMA_MUMPS 101-125 PHEMA_IADH5 21-43 PVG67_HSVI1 722-745 PHEMA_PI1HW 29-53 PHEMA_IADH6 21-43 PVGL2_CVBF 10-33 PVENV_BEV 62-86 PHEMA_IADH7 21-43 PVGL2_CVBL9 651-674 PVFO5_VACCC 280-304 PHEMA_IADM2 37-59 PVGL2_CVBLY 10-33 PVFO5_VACCP 280-304 PHEMA_IADMA 28-50 PVGL2_CVM4 1267-1290 PVFO5_VACCV 281-305 PHEMA_IADU3 37-59 PVGL2_CVMA5 1215-1238 PVFO9_VACCC 176-200 PHEMA_IAEN6 21-43 PVGL2_CVMJH 1126-1149 PVFO9_VACCV 176-200 PHEMA_IAEN7 37-59 PVGL2_CVPFS 1274-1297 PVGO1_VZVD 58-82 PHEMA_IAMAO 37-59 PVGL2_CVPPU 1272-1295 PVG10_HSVSA 355-379 PHEMA_IAME1 37-59 PVGL2_CVPR8 1050-1073 PVG12_HSVSA 68-92 PHEMA_IAME2 37-59 PVGL2_CVPRM 1050-1073 PVG19_HSVI1 88-112 PHEMA_IAME6 21-43 PVGL2_FIPV 1277-1300 PVG28_HSVI1 173-197 PHEMA_IANT6 37-59 PVGL2_IBV6 196-219 PVG43_HSVI1 109-133 PHEMA_IAQU7 21-43 PVGL2_IBVB 195-218 PVG87_HSVI1 108-132 1005-1029 PHEMA_IATKM 33-55 PVGL2_IBVD2 196-219 PVG72_HSVI1 720-744 PHEMA_IAUDO 37-59 PVGL2_IBVD3 196-219 PVGF1_IBVB 3601-3625 PHEMA_IAVI7 38-60 PVGL2_IBVK 195-218 PVGLB_HSVMD 589-613 PHEMA_IAX31 37-59 PVGL2_IBVM 195-218 PVGLB_ILTV6 597-621 PHEMA_IAZCO 37-59 PVGL2_IBVU1 178-201 PVGLB_ILTVS 607-631 PHEMA_IAZH2 21-43 PVGL2_IBVU2 178-201 PVGLB_ILTVT 607-631 PHEMA_IAZH3 21-43 PVGL2_IBVU3 178-201 PVGLE_HSV11 413-437 PHEMA_IAZUK 37-59 PVGLB_HCMVA 535-558 PVGLE_VZVD 469-493 PHEMA_PHODV 36-58 PVGLB_HCMVT 536-559 PVGLF_SV5 401-425 PHEMA_PI2H 65-87 PVGLB_HSVSA 483-506 PVGLH_HCMVA 574-598 PHEMA_PI2HT 65-87 PVGLB_MCMVS 566-589 PVGLH_HCMVT 573-597 PVFP7_CAPVK 89-111 PVGLC_HSV11 467-490 PVGLH_HSV11 443-467 803-827 PVFUS_VACC6 72-94 PVGLC_HSV1K 467-490 PVGLH_HSV1E 443-467 803-827 PVGO1_HSVI1 317-339 PVGLC_HSV2 435-458 PVGLM_BUNL7 31-55 PVGO3_VACCC 50-72 PVGLC_HSV23 436-459 PVGLM_BUNSH 31-55 PVGO3_VARV 50-72 PVGLM_BUNL7 1387-1410 PVGLM_HANTH 694-718 PVGO4_VACCC 11-33 PVGLM_BUNSH 1387-1410 PVGLM_RVFV 344-368 PVGO4_VARV 11-33 PVGLM_UUK 966-989 PVGLM_RVFVZ 344-368 PVG19_HSVI1 88-110 PVGLY_JUNIN 12-35 PVGLM_UUK 561-585 PVG28_HSVI1 173-195 PVGLY_LASSG 12-35 PVGNM_CPMV 311-335 PVG29_HSVI1 20-42 PVGLY_LASSJ 12-35 PVGP2_EBV 657-681 PVG46_HSVI1 134-156 PVGLY_LYCVA 12-35 PVGP3_EBV 854-878 PVG48_HSVSA 71-93 PVGLY_LYCVW 12-35 PVM1_REOVD 280-304 PVG58_HSVSA 266-288 PVGLY_MOPEI 12-35 PVM1_REOVL 280-304 PVG59_HSVI1 267-289 PVGLY_TACV 12-35 PVM21_REOVD 168-192 PVG5_SPV4 42-64 PVGLY_TACV5 12-35 PVM22_REOVD 168-192 PVG60_HSVI1 63-75 PVGLY_TACV7 12-35 PVM2_REOVJ 168-192 PVG65_HSVI1 1347-1369 PVGLY_TACVT 12-35 PVM2_REOVL 168-192 PVG6_SPV1R 60-82 PVGNM_CPMV 741-764 PVMAT_MEASI 87-111 PVGL2_IBV6 1056-1078 PVM1_REOVD 324-347 454-477 PVMAT_SSPVB 314-338 PVGL2_IBVB 1055-1077 PVM1_REOVL 454-477 PVME1_CVBM 137-161 PVGL2_IBVD2 1056-1078 PVMAT_MUMPS 227-250 PVME1_CVHOC 137-161 PVGL2_IBVK 1055-1077 PVMSA_HPBDB 269-292 PVME1_CVTKE 137-161 PVGL2_IBVM 1055-1077 PVMSA_HPBDC 268-291 PVME1_IBV6 74-98 PVGLB_HSVSU 117-139 PVMSA_HPBDU 231-254 PVME1_IBVB 74-98 PVGLB_HSVB2 745-767 PVMSA_HPBDW 269-292 PVME1_IBVB2 74-98 PVGLC_HSVMB 399-421 PVMSA_HPBHE 236-259 PVME1_IBVK 74-98 PVGLC_HSVMG 398-420 PVMSA_HPBGS 271-295 PVGLC_HSVMM 399-421 PVMSA_WHV1 289-293 PVGLF_BRSVA 265-287 482-504 PVMSA_WHV59 274-298 PVGLF_BRSVC 484-506 PVMSA_WHV7 274-298 PVGLF_BRSVR 484-506 PVMSA_WHV8 274-298 PVGLF_HRSV1 484-506 PVMSA_WHV8I 274-298 PVGLF_HRSVA 484-506 PVMSA_WHVW6 125-149 PVGLF_HRSVL 484-506 PVGLF_HRSVR 484-506 PVGLF_TRTV 452-474 PVGLG_IHNV 77-99 PVGLG_VHSVO 406-428 PVGLH_HSVE4 814-836 PVGLH_HSVEB 807-829 PVGLI_HCMVA 158-180 PVGLM_PTPV 743-765 PVGLP_BEV 430-452 1546-1568 PVGLY_LASSG 426-448 PVGLY_LASSJ 427-449 PVGLY_MOPEI 425-447 PVGP2_EBV 657-679 PVGP3_EBV 854-876 PVM1_REOVD 414-436 PVM1_REOVL 414-436 PVM3_REOVD 304-326 PVMAT_PI1HC 195-217 PVMAT_PI2HT 132-154 PVMAT_SENDF 195-217 PVMAT_SENDH 195-217 PVMAT_SENDZ 195-217 PVMAT_SV41 132-154 PVMEM_EBV 131-153 PVMP_CERV 293-315

TABLE XIII SEARCH RESULTS SUMMARY FOR P12LZIPC MOTIF PCGENE P12CTLZIP All Viruses (No Bacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 AREA 9 P194K_TRVSY POTENTIAL 194 KD PROTEIN TOBACCO RATTLE VIRUS 360-378 463-478 600-619 641-668 1011-1030 1299-1325 1385-1409 (STRAIN SYM) P3BHS_VACCC 3BETA-HSD VACCINIA VIRUS (STRAIN 41-56 297-321 COPENHAGEN) P3BHS_VACCV 3BETA-HSD VACCINIA VIRUS (STRAIN WR) 41-56 297-321 P3BHS_VARV 3BETA-HSD VARIOLA VIRUS 41-56 PAT3H_FOWPM ANTITHROMBIN-III FOWLPOX VIRUS (ISOLATE 47-69 HOMOLOG HP-438[MUNICH]) PATI1_VACCV 94 KD A-TYPE INCLUSION VACCINIA VIRUS (STRAIN WR) 387-410 PROTEIN PATI1_VARV 81 KD A-TYPE INCLUSION VARIOLA VIRUS 388-411 PROTEIN PATI2_HSV11 UL46 HERPES SIMPLEX VIRUS 279-305 (TYPE I/STRAIN 27) PATI2_HSV1F UL46 HERPES SIMPLEX VIRUS 279-305 (TYPE I/STRAIN F) PATI2_HSVEB ALPHA TRANS-INDUCING EQUINE HERPESVIRUS TYPE I 197-222 FACTOR 82 KD PROTEIN (STRAIN AB4P) PATI2_VACCC PUTATIVE A-TYPE INCLUSION VACCINIA VIRUS (STRAIN 215-241 PROTEIN COPENHAGEN) PATI2_VZVD ALPHA TRANS-INDUCING VARICELLA-ZOSTER VIRUS 61-79 377-397 FACTOR 74 KD PROTEIN (STRAIN DUMAS) PATI3_VACCV PUTATIVE A-TYPE INCLUSION VACCINIA VIRUS (STRAIN WR) 47-73 PROTEIN PATIN_HSVBP ALPHA TRANS-INDUCING BOVINE HERPESVIRUS TYPE I 101-120 277-292 PROTEIN (STRAIN P8-2) PATIN_HSVE4 ALPHA TRANS-INDUCING EQUINE HERPESVIRUS TYPE 4 104-123 PROTEIN PATIN_HSVEB ALPHA TRANS-INDUCING EQUINE HERPESVIRUS TYPE 1 129-148 PROTEIN (STRAIN AB4P) PATIN_VZVD ALPHA TRANS-INDUCING VARICELLA-ZOSTER VIRUS 203-230 PROTEIN (STRAIN DUMAS) PATI_COWPX A-TYPE INCLUSION PROTEIN COWPOX VIRUS 389-412 1102-1128 PB2_BBV B2 PROTEIN BLACK BEETLE VIRUS 31-52 PB701-HSV6G TRANSCRIPTIONAL HERPES SIMPLEX VIRUS 55-78 REGULATORY PROTEIN (TYPE 6/STRAIN GS) PBCRF_EBV BCRF1 PROTEIN PRECURSOR EPSTEIN-BARR VIRUS (STRAIN 96-123 B95-8) PBRL1_EBV TRANSCRIPTION ACTIVATOR EPSTEIN-BARR VIRUS 16-32 200-224 BRLF1 (STRAIN B95-8) PCAHH_VACCC CELL SURFACE-BINDING VACCINIA VIRUS (STRAIN 188-203 PROTEIN COPENHAGEN) PCAHH_VACCV CELL SURFACE-BINDING VACCINIA VIRUS (STRAIN WR) 188-203 PROTEIN PCAHH_VARV CELL SURFACE-BINDING VARIOLA VIRUS 188-203 PROTEIN PCCPH_HSVSA COMPL CONTROL PROTEIN HERPESVIRUS SAIMIRI 326-348 HOMOLOG PREC (STRAIN 11) PCELF_HSV11 CELL FUSION PROTEIN HERPES SIMPLEX VIRUS 178-196 212-238 286-309 PRECURSOR (TYPE I/STRAIN 17) HCELF_HSVIK CELL FUSION PROTEIN HERPES SIMPLEX VIRUS 178-196 212-238 PRECURSOR (TYPE I/STRAIN KOS) PCELF_HSV2H CELL FUSION PROTEIN HERPES SIMPLEX VIRUS 178-196 212-238 285-309 PRECURSOR (TYPE 2/STRAIN HG52) PCELF_HSVEB CELL FUSION PROTEIN HERPESVIRUS TYPE 205-223 249-268 PRECURSOR (STRAIN KENTUCKY A) PCELF_VZVD CELL FUSION PROTEIN VARICELLA-ZOSTER VIRUS 246-269 PRECURSOR (STRAIN DUMAS) PCGH2_HSVSA CYCLIN HOMOLOG HERPESVIRUS SAIMIRI 35-61 216-242 (STRAIN 11) PCOA1_BFDV COAT PROTEIN VP1 BUDGERIGAR FLEDGLING 93-110 DISEASE VIRUS PCOA1_POVBA COAT PROTEIN VP1 POLYOMAVIRUS BK (STRAIN AS) 25-52 97-123 233-251 CPOA1_POVBK COAT PROTEIN VP1 POLYOMAVIRUS BK 25-52 97-123 233-251 PCOA1_POVBO COAT PROTEIN VP1 BOVINE POLYOMAVIRUS 96-120 PCOA1_POVHA COAT PROTEIN VP1 HAMSTER POLYOMAVIRUS 16-43 PCOA1_POVJC COAT PROTEIN VP1 POLYOMAVIRUS JC 17-44 89-115 225-243 PCOA1_POVLY COAT PROTEIN VP1 LYMPHOTROPIC POLYOMAVIRUS 97-123 PCOA1_POVMK COAT PROTEIN VP1 MOUSE POLYOMAVIRUS (STRAIN 142-160 231-249 KILHAM) PCOA1_SV40 COAT PROTEIN VP1 SIMIAN VIRUS 40 27-44 99-125 235-253 PCOA1_TTV1 COAT PROTEIN TP1 THERMOPROTEUS TENAX VIRUS 80-103 (STRAIN KRA1) PCOA2_POVBO COAT PROTEIN VP2 BOVINE POLYOMAVIRUS 77-104 PCOA2_POVLY COAT PROTEIN VP2 LYMPHOTROPIC POLYOMAVIRS 79-102 PCOA2_POVM3 COAT PROTEIN VP2 MOUSE POLYOMAVIRUS 205-226 (STRAIN 3) PCOA3_TTV1 COAT PROTEIN TP3 THERMOPROTEUS TENAX VIRUS 33-55 I (STRAIN KRA1) PCOAT_ABMVW COAT PROTEIN ABUTILON MASAIC VIRUS 148-171 (ISOLATE WEST INDIA) PCOAT_BOOLV COAT PROTEIN PRECURSOR BOOLARRA VIRUS 383-401 PCOAT_CHVP1 MAJOR CAPSID PROTEIN PARAMECIUM BURSARIA 364-387 392-409 CHLORELLA VIRUS 1 PCOAT_CLVK COAT PROTEIN CASSAVA LATENT VIRUS (STRAIN 165-188 WEST KENYAN 844) PCOAT_CLVN COAT PROTEIN CASSAVA LATENT VIRUS (STRAIN 165-188 NIGERIAN) PCOAT_CMVSI COAT PROTEIN CYMBIDIUM MOSAIC VIRUS 58-76 (STRAIN SINGAPORE) PCOAT_CNV COAT PROTEIN CUCUMBER NECROSIS VIRUS 19-42 PCOAT_CSMV COAT PROTEIN CHLORIS STRIATE MOSAIC VIRUS 219-238 PCOAT_CTV36 COAT PROTEIN CITRUS TRISTEZA VIRUS 72-94 (ISOLATE T36) PCOAT_FCVC6 COAT PROTEIN FELINE CALICIVIRUS (STRAIN 564-587 642-664 CF1/68 FIV) PCOAT_FCVF4 COAT PROTEIN FELINE CALICIVIRUS (STRAIN 564-587 642-657 JAPANESE F4) PCOAT_FCVF9 COAT PROTEIN FELINE CALICIVIRUS (STRAIN F9) 567-590 645-660 PCOAT_FPV COAT PROTEIN VP1 FELINE PANLEUKOPENIA VIRUS 690-705 PCOAT_FPV19 COAT PROTEIN VP1 FELINE PANLEUKOPENIA VIRUS 690-705 (STRAIN 193) PCOAT_HEVS COAT PROTEIN HELENIUM VIRUS S 47-66 PCOAT_MEVA COAT PROTEIN VP1 MINK ENTERITIS VIRUS 685-700 (STRAIN ABASHIRI) PCOAT_MNSV COAT PROTEIN MELON NECROTIC SPOT VIRUS 37-53 PCOAT_MSTV COAT PROTEIN MAIZE STRIPE VIRUS 176-197 204-227 PCOAT_NMV COAT PROTEIN NARCISSUS MOSAIC VIRUS 67-86 PCOAT_NODAV COAT PROTEIN PRECURSOR NODAMURA VIRUS 379-394 PCOAT_ORSV COAT PROTEIN ODONTOGLOSSUM RINGSPOT 104-130 VIRUS PCOAT_OYMV COAT PROTEIN ONONIS YELLOW MOSAIC VIRUS 35-52 PCOAT_PAVC2 COAT PROTEIN VP2 CANINE PARVOVIRUS 547-562 (TYPE 2/STRAIN A72) PCOAT_PAVC7 COAT PROTEIN VP1 CANINE PARVOVIRUS (STRAIN 685-700 780929) PCOAT_PAVCD COAT PROTEIN VP1 CANINE PARVOVIRUS (STRAIN 700-715 CPV-D CORNELL 320) PCOAT_PAVCN COAT PROTEIN VP1 CANINE PARVOVIRUS (STRAIN N) 711-726 PCOAT_PEMV COAT PROTEIN PRECURSOR PEPPER MOTTLE VIRUS 273-295 PCOAT_PMV COAT PROTEIN PAPAYA MOSAIC POTEXVIRUS 85-103 PCOAT_PPMVS COAT PROTEIN PEPPER MILD MOTTLE VIRUS 64-84 103-129 (STRAINI SPAIN) PCOAT_PVSP COAT PROTEIN POTATO VIRUS (STRAIN 129-147 PERUVIAN) PCOAT_RSV COAT PROTEIN RICE STRIPE VIRUS 128-152 PCOAT_SMWLM COAT PROTEIN SATELLITE MAIZE WHITE LINE 51-67 MOSAIC VIRUS PCOAT_SMYEA COAT PROTEIN STRAWBERRY MILD YELLOW 57-72 EDGE-ASSOCAITED VIRUS PCOAT_TAMV GENOME POLYPROTEIN TAMARILLO MOSAIC VIRUS 222-237 PCOAT_TBSVB COAT PROTEIN TOMATO BUSHY STUNT VIRUS 359-383 (STRAIN BS-3) PCOAT_TCV COAT PROTEIN TURNIP CRINKLE VIRUS 73-89 PCOAT_TGMV COAT PROTEIN TOMATO GOLDEN MOSAIC VIRUS 154-177 PCOAT_TMGMV COAT PROTEIN TOBACCO MILD GREEN MOSAIC 102-128 VIRUS (TMV STRAIN U2) PCOAT_TMV COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (VULGARE) PCOAT_TMV06 COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (STRAIN 06) PCOAT_TMVDA COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (STRAIN DAHLEMENSE) PCOAT_TMVER COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (STRAIN ER) PCOAT_TMVHR COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (STRAIN HOLMES RIBGRASS (HR)) PCOAT_TMVO COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (STRAIN O) PCOAT_TMVOM COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (STRAIN OM) PCOAT_TMVTO COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (STRAIN TOMATO/L) PCOAT_TNVA COAT PROTEIN TOBACCO NECROSIS VIRUS 119-142 (STRAIN A) PCOAT_TNVD COAT PROTEIN TOBACCO NECROSIS VIRUS 108-134 (STRAIN D) PCOLL_HSVSC COLLAGEN-LIKE PROTEIN HERPESVIRUS SAIMIRI 71-96 (SUBGROUP C/STRAIN 488) PCORA_HPBV2 CORE ANTIGEN HEPATITIS B VIRUS 79-100 (SUBTYPE ADW2) PCORA_HPBVA CORE ANTIGEN HEPATITIS B VIRUS 15-31 (STRAIN ALPHA1) PCORA_HPBVZ CORE ANTIGEN HEPATITIS B VIRUS 79-100 (SUBTYPE ADYW) PDNBI_ADE02 PROBABLE DNA-BINDING HUMAN ADENOVIRUS TYPE 2 71-93 PROTEIN PDNBI_EBV MAJOR DNA-BINDING EPSTEIN-BARR VIRUS 649-673 PROTEIN (STRAIN B95-8) PDNBI_HCMVA MAJOR DNA-BINDING HUMAN CYTOMEGALOVIRUS 681-708 PROTEIN (STRAIN AD169) PDNBI_HSV11 MAJOR DNA-BINDING HERPES SIMPLEX VIRUS 459-476 597-620 PROTEIN (TYPE 1/STRAIN 17) PDNBI_HSV1F MAJOR DNA-BINDING HERPES SIMPLEX VIRUS 459-476 597-620 PROTEIN (TYPE 1/STRAIN F) PDNBI_HSV1K MAJOR DNA-BINDING HERPES SIMPLEX VIRUS 459-476 597-620 PROTEIN (TYPE 1/STRAIN KOS) PDNBI_HSVB2 MAJOR DNA-BINDING BOVINE HERPESVIRUS TYPE 2 455-472 596-616 PROTEIN (STRAIN BMV) PDNBI_HSVEB MAJOR DNA-BINDING EQUINE HERPESVIRUS TYPE 1 810-831 PROTEIN (STRAIN AD4P) PDNBI_HSVSA MAJOR DNA-BINDING HERPESVIRUS SAIMIRI 108-127 610-629 869-887 974-1000 PROTEIN (STRAIN 11) PDNBI_MCMVS MAJOR DNA-BINDING MURINE CYTOMEGALOVIRUS 657-684 PROTEIN (STRAIN SMITH) PDNBI_SCMVC MAJOR DNA-BINDING SIMIAN CYTOMEGALOVIRUS 188-212 643-670 PROTEIN (STRAIN COLBURN) PDNLI_VARV DNA LIGASE VARIOLA VIRUS 269-294 PDPOL_ADE02 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 2 264-283 828-850 PDPOL_ADE05 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 5 264-283 828-850 PDPOL_ADE07 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 7 331-350 494-517 894-916 PDPOL_ADE12 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 12 262-281 562-583 826-848 PDPOL_CBEPV DNA POLYMERASE CHORISTONEURA BIENNIS 430-454 654-678 732-757 ENTOMOPOXVIRUS PDPOL_CHVN2 DNA POLYMERASE CHLORELLA VIRUS NY-2A 424-442 PDPOL_CHVP1 DNA POLYMERASE PARAMECIUM BURSARIA 153-172 424-442 CHLORELLA VIRUS 1 PDPOL_EBV DNA POLYMERASE EPSTEIN-BARR VIRUS 354-374 438-463 524-542 667-687 973-990 (STRAIN B95-8) PDPOL_FOWPV DNA POLYMERASE FOWLPOX VIRUS 60-77 220-247 PDPOL_HCMVA DNA POLYMERASE HUMAN CYTOMEGALOVIRUS 569-587 945-960 1029-1053 (STRAIN AD169) PDPOL_HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS 4-29 157-174 522-541 554-572 (BROWN SHANGHAI DUCK ISOLATE S5) PDPOL_HPBDC DNA POLYMERASE DUCK HEPATITIS B VIRUS 4-29 157-174 521-540 553-571 (STRAIN CHINA) PDPOL_HPBDU DNA POLYMERASE DUCK HEPATITIS B VIRUS 181-200 213-231 PDPOL_HPBDW DNA POLYMERASE DUCK HEPATITIS B VIRUS (WHITE 4-29 157-174 522-541 554-572 SHANGHAI DUCK ISOLATE S31) PDPOL_HPBGS DNA POLYMERASE GROUND SQUIRREL HEPATITIS 448-475 VIRUS PDPOL_HPBHE DNA POLYMERASE HERON HEPATITIS B VIRUS 4-29 554-572 PDPOL_HPBV2 DNA POLYMERASE HEPATITIS B VIRUS 412-439 447-463 761-780 (SUBTYPE ADW2) PDPOL_HPBV4 DNA POLYMERASE HEPATITIS B VIRUS 410-417 (SUBTYPE ADR4) PDPOL_HPBV9 DNA POLYMERASE HEPATITIS B VIRUS 412-439 447-463 763-780 (SUBTYPE ADW/STRAIN 991) PDPOL_HPBVA DNA POLYMERASE HEPATITIS B VIRUS 80-96 399-426 434-450 750-767 (STRAIN ALPHA1) PDPOL_HPBV1 DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96 410-437 445-468 761-778 ADW/STRAIN INDONESIA/ PIDW420) PDPOL_HPBVJ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96 410-437 445-468 761-778 ADW/STRAIN JAPAN/PJDW233) PDPOL_PHBVL DNA POLYMERASE HEPATITIS B VIRUS (STRAIN 80-96 399-426 434-457 750-767 LSH/CHIMPANZEE ISOLATE) PDPOL_HPBVM DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96 410-437 760-777 ADR/MUTANT) PDPOL_HPBVO DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96 410-437 445-468 761-778 ADW/STRAIN OKINAWA/ PODW282) PDPOL_HPBVP DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 412-439 447-463 ADW/STRAIN PHILIPPINO/ PFDW294) PDPOL_HPBVR DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96 410-437 761-778 ADR) PDPOL_HPBVW DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 82-98 405-432 440-456 ADW) PDPOL_HPBVY DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96 399-426 434-457 750-767 AYW) PDPOL_HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96 399-426 434-457 ADYW) PDPOL_HSV11 DNA POLYMERASE HERPES SIMPLEX VIRUS 797-817 877-897 1073-1090 (TYPE I/STRAIN 17) PDPOL_HSV1A DNA POLYMERASE HERPES SIMPLEX VIRUS 797-817 877-897 1073-1090 (TYPE I/STRAIN ANGELOTTI) PDPOL_HSV1K DNA POLYMERASE HERPES SIMPLEX VIRUS 797-817 877-897 1073-1090 (TYPE I/STRAIN KOS) PDPOL_HSV1S DNA POLYMERASE HERPES SIMPLEX VIRUS 797-817 877-897 1073-1090 (TYPE I/STRAIN SC16) PDPOL_HSV21 DNA POLYMERASE HERPES SIMPLEX VIRUS 802-822 882-902 1078-1095 (TYPE 2/STRAIN 186) PDPOL_HSV6U DNA POLYMERASE HERPES SIMPLEX VIRUS 652-672 786-803 858-882 (TYPE 6/STRAIN UGANDA-1102) PDPOL_HSVEB DNA POLYMERASE EQUINE HERPESVIRUS TYPE 1 283-299 377-392 454-477 798-818 878-898 (STRAIN AB4P) PDPOL_HSVI1 DNA POLYMERASE ICTALURID HERPESVIRUS 1 257-275 397-418 PDPOL_HSVSA DNA POLYMERASE HERPESVIRUS SAIMIRI 118-137 297-319 344-364 514-532 955-972 (STRAIN 11) PDPOL_MCMVS DNA POLYMERASE MURINE CYTOMEGALOVIRUS 303-322 535-553 780-802 (STRAIN SMITH) PDPOL_NPVAC DNA POLYMERASE AUTOGRAPHA CALIFORNICA 518-536 676-697 NUCLEAR POLYHEDROSIS VIRUS PDPOL_VARV DNA POLYMERASE VARIOLA VIRUS 421-437 PDPOL_VZVD DNA POLYMERASE VARICELLA-ZOSTER VIRUS 312-331 363-382 440-463 713-740 757-781 1006-1024 (STRAIN DUMAS) PDPOL_WHV1 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 1 446-473 PDPOL_WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS 451-478 VIRUS 59 PDPOL_WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 7 451-478 PDPOL_WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 450-477 554-571 PDPOL_HEV8I DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 451-478 PDPOL_WHVW6 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 123-150 W64 (ISOLATE PWS23) PDPOM_HPBVY DNA POLYMERASE HEPATITIS B VIRUS 399-426 434-450 750-767 (SUBTYPE AYW) PDUT_HCMVA DUTPASE HUMAN CYTOMEGALOVIRUS 107-126 (STRAIN AD169) PDUT_HSVE4 DUTPASE EQUINE HERPESVIRUS TYPE 4 130-154 (STRAIN 1942) PDUT_HSVEB DUTPASE EQUINE HERPESVIRUS TYPE 1 130-149 (STRAIN AB4P) PDUT_HDVI1 DUTPASE ICTALURID HERPESVIRUS 1 72-95 PDUT_HSVSA DUTPASE HERPESVIRUS SAIMIRI 22-45 79-104 168-183 (STRAIN 11) PE111_ADEM1 EARLY E1A 11 KD PROTEIN MOUSE ADENOVIRUS TYPE 1 24-47 PE146_ADE07 EARLY E1A 63 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 8-35 PE1A_ADE04 EARLY E1A 28 KD PROTEIN HUMAN ADENOVIRUS TYPE 4 104-120 PE1A_ADE07 EARLY E1A 28 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 8-35 PE1A_ADES7 EARLY E1A 28 KD PROTEIN SIMIAN ADENOVIRUS TYPE 7 173-189 238-254 PE1BL_ADE12 E1B PROTEIN, LARGE HUMAN ADENOVIRUS TYPE 12 451-467 T-ANTIGEN PE1BL_ADEC2 E1B PROTEIN, LARGE CANINE ADENOVIRUS TYPE 2 101-122 T-ANTIGEN PR1BL_ADENT EARLY E1B 44 KD PROTEIN TUPAIA ADENOVIRUS 75-101 PE1BS_ADEC2 E1B PROTEIN, SMALL CANINE ADENOVIRUS TYPE 2 55-77 T-ANTIGEN PE1BS_ADEM1 E1B PROTEIN, SMALL MOUSE ADENOVIRUS TYPE 1 118-138 T-ANTIGEN PE310_ADE02 EARLY E1B 10 4 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 3-21 34-60 PRECURSOR PE310_ADE05 EARLY E1B 10 4 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 3-21 33-60 PRECURSOR PE310_ADE07 EARLY E3B 4 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 3-24 PRECURSOR PE311_ADE02 EARLY E3A 11 6 KD HUMAN ADENOVIRUS TYPE 2 27-53 GLYCOPROTEIN PE311_ADE03 EARLY E3 9 0 KD HUMAN ADENOVIRUS TYPE 3 19-45 GLYCOPROTEIN PE311_ADE05 EARLY E3A 10 5 KD HUMAN ADENOVIRUS TYPE 5 20-46 GLYCOPROTEIN PE311_ADE07 EARLY E3 7 7 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 36-62 PE314_ADE05 EARLY E3 14 5 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 108-125 PE315_ADE03 EARLY E3B 14 5 KD PROTEIN HUMAN ADENOVIRUS TYPE 3 52-72 PRECURSOR PE315_ADE07 EARLY E3B 14 9 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 52-72 PRECURSOR PE316_ADE03 EARLY E3 16 KD HUMAN ADENOVIRUS TYPE 3 102-125 GLYCOPROTEIN PE321_ADE03 EARLY E3 20 5 KD HUMAN ADENOVIRUS TYPE 3 146-167 GLYCOPROTEIN PE321_ADE07 EARLY E3 20 5 KD HUMAN ADENOVIRUS TYPE 7 146-167 GLYCOPROTEIN PE322_ADEC1 EARLY E3 22 2 KD CANINE ADENOVIRUS TYPE 1 155-177 GLYCOPROTEIN (STRAIN GLAXO) PE3GL_ADEM1 EARLY E3 17 7 MOUSE ADENOVIRUS TYPE 1 105-127 GLYCOPROTEIN PE411_ADE02 PROBABLE EARLY E4 11 KD HUMAN ADENOVIRUS TYPE 2 56-77 PROTEIN PE411_ADE05 PROBABLE EARLY E4 11 KD HUMAN ADENOVIRUS TYPE 5 56-77 PROTEIN PE433_ADEM1 PROBABLE EARLY E4 33 KD MOUSE ADENOVIRUS TYPE 1 61-80 PROTEIN PE434_ADE02 EARLY E4 34 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 80-106 PEAD_EBV EARLY ANTIGEN PROTEIN D EPSTEIN-BARR VIRUS 263-286 (STRAIN B95-8) PEAR_EBV EARLY ANTIGEN PROTEIN R EPSTEIN-BARR VIRUS 159-184 (STRAIN B95-8) PEBN2_EBV EBNA-2 NUCLEAR PROTEIN EPSTEIN-BARR VIRUS 126-141 (STRAIN B95-8) PEBN3_EBV EBNA-3 NUCLEAR PROTEIN EPSTEIN-BARR VIRUS 113-131 662-683 (STRAIN B95-8) PEFT1_VARV EARLY TRANSCRIPTION VARIOLA VIRUS 21-41 FACTOR 70 KD SUBUNIT PENV1_FRSFV ENV POLYPROTEIN FRIEND SPLEEN FOCUS-FORMIMG 380-407 PRECURSOR VIRUS PENV2_FRSFV ENV POLYPROTEIN FRIEND SPLEEN FOCUS-FORMING 380-407 PRECURSOR VIRUS PENV_AVIR3 ENV POLYPROTEIN AVIAN RETROVIRUS RPL30 206-225 PENV_AVISU COAT PROTEIN GP37 AVIAN SARCOMA VIRUS 98-117 (STRAIN UR2) PENV_BAEVM ENV POLYPROTEIN BABOON ENDOGENOUS VIRUS 170-190 202-224 (STRAIN M7) PENV_BIV06 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY 47-68 178-201 434-450 525-546 PRECURSOR VIRUS (ISOLATE 106) PENV_BIV27 ENV POLYPROTEIN BOVINE IMMUNIDEFICIENCY 47-68 147-168 207-230 463-479 554-575 PRECURSOR VIRUS (ISOLATE 127) PENV_BLVAF ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 303-327 (AMERICAN ISOLATE FLK) PENV_BLVAU ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 303-327 (AUSTRALIAN ISOLATE) PENV_BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 303-327 (AMERICAN ISOLATE VDM) PENV_BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 303-327 (BELGIUM ISOLATE LB285) PENV_BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 303-327 (BELGIUM ISOLATE LB59) PENV_BLVJ ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 303-327 (JAPANESE ISOLATE BLV-1) PENV_FENV1 ENV POLYPROTEIN FELINE ENDOGENOUS VIRUS 30-47 225-246 630-651 PRECURSOR ECE1 PENV_FIVPE ENV POLYPROTEIN FELINE ENDOGENOUS VIRUS 30-47 225-246 630-651 PRECURSOR ECE1 PENV_FLVC6 ENV POLYPROTEIN FELINE LEUKEMIA PROVIRUS 38-55 624-645 PRECURSOR (CLONE CFE-6) PENV_FLVGL ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 9-29 447-468 605-626 PRECURSOR (STRAIN A/GLASGOW-1) PENV_FLVLB ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 467-488 625-646 PRECURSOR (STRAIN LAMBDA-B1) PENV_FLVSA ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 444-465 602-623 PRECURSOR (STRAIN SARMA) PENV_FOAMV ENV POLYPROTEIN HUMAN SPUMARETROVIRUS 153-174 255-275 300-325 481-496 710-727 864-887 924-951 957-978 (FOAMY VIRUS) PENV_FSVGA ENV POLYPROTEIN FELINE SARCOMA VIRUS 467-488 625-646 PRECURSOR (STRAIN GARDNER-ARNSTEIN) PENV_FSVGB ENV POLYPROTEIN FELINE SARCOMA VIRUS 447-468 605-626 PRECURSOR (STRAIN GA) PENV_FSVSM ENV POLYPROTEIN FELINE SARCOMA VIRUS 450-471 608-629 PRECURSOR (STRAIN SM) PENV_FSVST ENV POLYPROTEIN FELINE SARCOMA VIRUS 467-488 PRECURSOR (STRAIN SNYDER-THEILEN) PENV_GALV ENV POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 519-540 PRECURSOR PENV_HV1B1 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 498-520 VIRUS TYPE 1 (BH10 ISOLATE) PENV_HV1B8 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 493-515 VIRUS TYPE 1 (BH8 ISOLATE) PENV_HV1BN GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 494-516 VIRUS TYPE 1 (BRAIN ISOLATE) PENV_HV1BR GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 503-525 VIRUS TYPE 1 (BRU ISOLATE) PENV_HV1C4 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 428-448 VIRUS TYPE 1 (CDC-451 ISOLATE) PENV_HV1EL GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 495-517 VIRUS TYPE 1 (ELI ISOLATE) PENV_HV1H2 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 498-520 VIRUS TYPE 1 (HXB2 ISOLATE) PENV_HV1H3 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 498-520 VIRUS TYPE 1 (HXB3 ISOLATE) PENV_HV1J3 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 510-532 VIRUS TYPE 1 (JH3 ISOLATE) PENV_HV1JR GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 490-512 VIRUS TYPE 1 (JRCSF ISOLATE) PENV_HV1KB GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 504-526 552-579 752-768 VIRUS TYPE 1 (STRAIN KB-1-GP32) PENV_HV1MA GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 500-522 VIRUS TYPE 1 (MAL ISOLATE) PENV_HV1MF GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 496-518 VIRUS TYPE 1 (MFA ISOLATE) PENV_HV1N5 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 178-203 VIRUS TYPE 1 (NEW YORK-5 ISOLATE) PENV_HV1ND GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 488-510 VIRUS TYPE 1 (NDK ISOLATE) PENV_HV1OY GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 123-140 VIRUS TYPE 1 (OYI ISOLATE) PENV_HV1PV GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 498-520 VIRUS TYPE 1 (PV22 ISOLATE) PENV_HV1RH GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 445-460 VIRUS TYPE 1 (RF/HAT ISOLATE) PENV_HV1S1 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 489-511 738-754 VIRUS TYPE 1 (SF162 ISOLATE) PENV_HV1S3 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 300-322 VIRUS TYPE 1 (SF33 ISOLATE) PENV_HV122 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 123-145 410-427 495-517 VIRUS TYPE 1 (Z2/CDC-Z34 ISOLATE) PENV_HV1Z3 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 117-133 175-198 VIRUS TYPE 1 (ZAIRE 3 ISOLATE) PENV_HV1Z6 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 497-519 VIRUS TYPE 1 (ZAIRE 6 ISOLATE) PENV_HV1Z8 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 505-527 VIRUS TYPE 1 (Z-84 ISOLATE) PENV_HV1ZH GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 123-142 438-453 498-520 VIRUS TYPE 1 (ZAIRE HZ321 ISOLATE) PENV_HV2BE GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 3-26 750-775 781-804 VIRUS TYPE 2 (ISOLATE BEN) PENV_HV2CA GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 750-777 VIRUS TYPE 2 (ISOLATE CAM2) PENV_HV2D1 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 3-26 741-766 772-795 VIRUS TYPE 2 (ISOLATE D194) PENV_HV2D2 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 9-28 VIRUS TYPE 2 (ISOLATE D205.7) PENV_HV2G1 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 741-766 772-795 VIRUS TYPE 2 (ISOLATE GHANA-1) PENV_HV2NZ GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 742-767 777-800 VIRUS TYPE 2 (ISOLATE NIH-Z) PENV_HV2RO GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 751-776 VIRUS TYPE 2 (ISOLATE ROD) PENV_HV2SB GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 743-768 778-804 VIRUS TYPE 2 (ISOLATE SBLISY) PENV_HV2ST GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 745-770 VIRUS TYPE 2 (ISOLATE ST) PENV_JSRV ENV POLYPROTEIN SHEEP PULMONARY 104-119 299-325 376-398 541-564 PRECURSOR ADENOMATOSIS VIRUS PENV_MCFF ENV POLYPROTEIN MINK CELL FOCUS-FORMING 600-621 PRECURSOR MURINE LEUKEMIA VIRUS PENV_MCFF3 ENV POLYPROTEIN MINK CELL FOCUS-FORMING 601-622 PRECURSOR MURINE LEUKEMIA VIRUS (ISOLATE CI- PENV_MLVAV ENV POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 630-651 PRECURSOR PENV_MLVCB ENV POLYPROTEIN CAS-BR-E MURINE LEUKEMIA 625-646 PRECURSOR VIRUS PENV_MLVF5 ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 639-660 PRECURSOR VIRUS (ISOLATE 57) PENV_MLVFF ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 639-660 PRECURSOR VIRUS (ISOLATE FB29) PENV_MLVFP ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 639-660 PRECURSOR VIRUS (ISOLATE PVC-211) PENV_MLVHO ENV POLYPROTEIN HOMULV MURINE LEUKEMIA 626-647 PRECURSOR VIRUS (MUS HORTULANUS VIRUS) PENV_MLVK1 ENV POLYPROTEIN KRISTEN MURINE LEUKEMIA 167-188 VIRUS PENV_MLVMO ENV POLYPROTEIN MOLONEY MURINE LEUKEMIA 629-650 PRECURSOR VIRUS PENV_MLVRD ENV POLYPROTEIN RADIATION MURINE LEUKEMIA 624-645 PRECURSOR VIRUS PENV_MLVRK ENV POLYPROTEIN RADIATION MURINE LEUKEMIA 624-645 PRECURSOR VIRUS (STRAIN KAPLAN) PENV_MMTVB ENV POLYPROTEIN MOUSE MAMMARY TUMOR 643-663 VIRUS (STRAIN BR6) PENV_MMTVG ENV POLYPROTEIN MOUSE MAMMARY TUMOR 643-663 VIRUS (STRAIN GR) PENV_MPMV ENV POLYPROTEIN SIMIA MASON-PFIZER VIRUS 213-235 PENV_MSVFB ENV POLYPROTEIN FBJ MURINE OSTEOSARCOMA 170-191 VIRUS PENV_OMVVS ENV POLYPROTEIN OVINE LENTIVIRUS 658-683 PRECURSOR (STRAIN SA-OMVV) PENV_RMCFV ENV POLYPROTEIN RAUSCHER MINK CELL 603-624 PRECURSOR FOCUS-INDUCING VIRUS PENV_RSVP ENV POLYPROTEIN ROUS SARCOMA VIRUS 42-69 533-552 (STRAIN PRAGUE C) PENV_SFV1 ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 300-325 710-727 864-887 924-951 957-978 PENV_SFV3L ENV POLYPROTEIN SIMIAN FOAMY VIRUS 157-178 304-329 707-724 861-884 921-948 954-975 (TYPE 3/STRAIN LK3) PENV_SIVA1 GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 437-458 VIRUS (AGM155 ISOLATE) PENV_SIVAG GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 442-463 VIRUS (AGM3 ISOLATE) PENV_SIVA1 GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 421-442 VIRUS (ISOLATE AGM/CLONE GRI-1) PENV_SIVAT GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 435-456 VIRUS (TYO-1 ISOLATE) PENV_SIVGB GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 93-109 VIRUS (ISOLATE GB1) PENV_SIVM1 GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 766-793 803-826 VIRUS (MM142-83 ISOLATE) PENV_SIVMK GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 139-154 765-792 802-825 VIRUS (K6W ISOLATE) PENV_SIVML GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 139-154 764-791 801-824 VIRUS (K78 ISOLATE) PENV_SIVS4 GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 769-789 806-829 VIRUS (F236/SMH4 ISOLATE) PENV_SIVSP GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 773-793 810-833 VIRUS (BPJ/BC13 ISOLATE) PENV_SMSAV P15E PROTEIN SIMIAN SARCOMA VIRUS 42-63 PENV_SRV1 EVN POLYPROTEIN SIMIAN RETROVIRUS SRV-1 213-235 PERBA_AVIER ERBA ONCOGENE PROTEIN AVIAN ERYTHROBLASTOSIS 227-249 VIRUS (STRAIN ES4) PERG1_FOWP1 EARLY TRANSCRIPTION FOWLPOX VIRUS (STRAIN FP-1) 21-41 73-92 FACTOR PETF1_SFVKA EARLY TRANSCRIPTION SHOPE FIBROMA VIRUS 21-41 FACTOR (STRAIN KASZA) PETF1_VACCC EARLY TRANSCRIPTION VACCINIA VIRUS (STRAIN 21-41 FACTOR COPENHAGEN) PETF1_VACCV EARLY TRANSCRIPTION VACCINIA VIRUS (STRAIN WR) 21-41 FACTOR PETF2_VACCC EARLY TRANSCRIPTION VACCINIA VIRUS (STRAIN 50-73 101-117 165-187 285-308 558-582 FACTOR 82 KD SUBUNIT COPENHAGEN) PETF2_VACCV EARLY TRANSCRIPTION VACCINIA VIRUS (STRAIN WR) 48-72 FACTOR 82 KD SUBUNIT PETF2_VARV EARLY TRANSCRIPTION VARIOLA VIRUS 50-73 101-117 165-187 285-308 558-582 FACTOR 82 KD SUBUNIT PEXON_HSV11 ALKALINE EXONULEASE HERPES SIMPLEX VIRUS 165-180 (TYPE 1/STRAIN 17) PEXON_HSV2 ALKALINE EXONULEASE HERPES SIMPLEX VIRUS (TYPE 2) 155-170 PEXON_HSVEB ALKALINE EXONULEASE EQUINE HERPES VIRUS TYPE 1 276-291 (STRAIN AB4P) PEXON_PRVN3 ALKALINE EXONULEASE PSEUDORABIES VIRUS 36-51 (STRAIN NIA-3) PEXON_VZVD ALKALINE EXONULEASE VARICELLA-ZOSTER VIRUS 28-44 217-262 (STRAIN DUMAS) PFIB2_ADE40 41 4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 116-133 PFIB2_ADE41 41 4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 116-133 PFIBP_ADE03 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 3 152-173 PFIBP_ADE05 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 5 447-473 PFIBP_ADEB3 FIBER PROTEIN BOVINE ADENOVIRUS TYPE 3 347-372 775-801 (MASTADENOVIRUS BOS3) PFIBP_ADEC1 FIBER PROTEIN CANINE ADENOVIRUS TYPE 1 382-397 (STRAIN GLAXO) FP1BP_ADEM1 FIBER PROTEIN MOUSE ADENOVIRUS TYPE 1 191-215 227-252 493-513 548-571 579-599 PGAG_AVEV1 GAG POLYPROTEIN AVIAN ENDOGENOUS VIRUS EV-1 53-78 PGAG_AVEV2 GAG POLYPROTEIN AVIAN ENDOGENOUS 2-27 ROUS-ASSOCIATED VIRUS-0 PGAG_AVIMC GAG POLYPROTEIN AVIAN MYELOCYTOMATOSIS 53-78 VIRUS MC29 PGAG_AVIMD GAG POLYPROTEIN AVIAN MYELOCTYOMATOSIS 53-78 VIRUS HB1 PGAG_AVISU CORE PROTEIN P19 AVIAN SARCOMA VIRUS 53-78 (STRAIN UR2) PGAG_AVISY GAG POLYPROTEIN AVIAN SARCOMA VIRUS 53-78 (STRAIN Y73) PGAG_BAEVM GAG POLYPROTEIN BABOON ENDOGENOUS VIRUS 397-422 (STRAIN M7) PGAG_BLVAU GAG POLYPROTEIN BOVINE LEUKEMIA VIRUS 212-238 (AUSTRALIAN ISOLATE) PGAG_BLVJ GAG POLYPROTEIN BOVINE LEUKEMIA VIRUS 213-239 (JAPANESE ISOLATE BLV-1) PGAG_CAEVC GAG POLYPROTEIN CAPRINE ARTHRITIS 102-119 ENCEPHALITIS VIRUS (STRAIN CORK) PGAG_FUJSV GAG POLYPROTEIN FUJINAMI SARCOMA VIRUS 53-78 PGAG_HTL1A GAG POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 77-94 TYPE 1 (STRAIN ATK) PGAG_HTL1C GAG POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 77-94 TYPE 1 (CARIBBEAN ISOLATE) PGAG_HTL1M GAG POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 77-94 TYPE 1 (ISOLATE MT-2) PGAG_HV1A2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PGAG_HV1B1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (BH10 ISOLATE) PGAG_HV1B5 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (BH5 ISOLATE) PGAG_HV1BR GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (BRU ISOLATE) PGAG_HV1C4 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (CDC-451 ISOLATE) PGAG_HV1EL GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (ELI ISOLATE) PGAG_HV1H2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (HXB2 ISOLATE) PGAG_HV1J3 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (JH3 ISOLATE) PGAG_HV1JR GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (JRCSF ISOLATE) PGAG_HV1MA GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 262-285 VIRUS TYPE 1 (MAL ISOLATE) PGAG_HV1MN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (MN ISOLATE) PGAG_HV1N5 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (NEW YORK-5 ISOLATE) PGAG_HV1ND GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 352-373 VIRUS TYPE 1 (NDK ISOLATE) PGAG_HV1OY GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (OY1 ISOLATE) PGAG_HVIPV GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (PV22 ISOLATE) PGAG_HV1RH GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (RF/HAT ISOLATE) PGAG_HV1U4 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (STRAIN UGANDAN/ISO) PGAG_HV1W2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (WM12 ISOLATE) PGAG_HV1Z2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (Z2/CDC-Z34 ISOLATE) PGAG_IPMA RETROVIRUS-RELATED GAG MOUSE INTRACISTERNAL 757-772 POLYPROTEIN A-PARTICLE PGAG_MMTVB GAG POLYPROTEIN MOUSE MAMMARY TUMOR 82-97 VIRUS (STRAIN BR6) PGAG_MMTVC GAG POLYPROTEIN MOUSE MAMMARY TUMOR 82-97 VIRUS (STRAIN C3H) PGAG_MMTVG GAG POLYPROTEIN MOUSE MAMMARY TUMOR 82-97 VIRUS (STRAIN GR) PGAG_RSVP GAG POLYPROTEIN ROUS SARCOMA VIRUS 53-78 (STRAIN PRAGUE C) PGAG_SCVLA MAJOR COAT PROTEIN SACCAROMYCES CEREVISIAE 618-645 VIRUS L-A PGAG_SFV1 GAG POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 85-103 PGAG_SFV3L GAG POLYPROTEIN SIMIAN FOAMY VIRUS 83-101 (TYPE 3/STRAIN LK3) PGAG_SIVA1 GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 189-213 VIRUS (AGM155 ISOLATE) PGAG_SIVAG GAG POLYPROTEIN SIMIAN IMMUNODIFICIENCY 193-217 VIRUS (AGM3 ISOLATE) PGAG_SIVAT GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 189-213 VIRUS (TYO-1 ISOLATE) PGAG_SIVCZ GAG POLYPROTEIN CHIMPANZEE 66-92 IMMUNODEFICIENCY VIRUS (SIV(CPZ)) PGAG_SIVGB GAG POLYPROTEIN SIMIAN IMMUNODIFICIENCY 66-92 VIRUS (ISOLATE GB) PGAG_SIVM1 GAG POLYPROTEIN SIMIAN IMMUNODEFCICENCY VIRUS (MM142-83 ISOLATE) PGAG_SMRVH GAG POLYPROTEIN SQUIRREL MONKEY RETROVIRUS 286-307 (SMRV-H) PGLRX_VACCC POSSIBLE GLUTAREDOXIN VACCINIA VIRUS (STRAIN 71-87 COPENHAGEN), AND (STRAIN L-IVP) PGLRX_VARV POSSIBLE GLUTAREDOXIN VARIOLA VIRUS 71-87 PGRAN_GVAS GRANULIN AGROTIS SEGETUM GRANULOSIS 208-226 VIRUS PGRAN_GVTN GRANULIN TRICHOPLUSIA NI GRANULOSIS 209-227 VIRUS PGRFA_VACCC GROWHT FACTOR VACCINIA VIRUS (STRAIN 104-124 COPENHAGEN) PGRFA_VACCV GROWTH FACTOR VACCINIA VIRUS (STRAIN WR) 104-123 PGRFA_VARV GROWTH FACTOR VARIOLA VIRUS 104-122 PHELI_EBV PROBABLE HELICASE EPSTEIN-BARR VIRUS 180-207 338-361 438-464 (STRAIN B95-8) PHELI_HCMVA PROBABLE HELICASE HUMAN CYTOMEGALOVIRUS 397-420 539-560 826-852 (STRAIN AD169) PHELI_HSV11 PROBABLE HELICASE HERPES SIMPLEX VIRUS 389-408 628-646 (TYPE 1/STRAIN 17) PHELI_HSV2H PROBABLE HELICASE HERPES SIMPLEX VIRUS 290-309 529-554 (TYPE 2/STRAIN HG52) PHELI_HSVEB PROBABLE HELICASE EQUINE HERPESVIRUS TYPE 1 181-204 243-266 394-413 (STRAIN AB4P) PHELI_HSVSA PROBABLE HELICASE HERPESVIRUS SAIMIRI 327-350 389-411 658-683 (STRAIN 11) PHELI_VZVD PROBABLE HELICASE VARICELLA-ZOSTER VIRUS 165-189 383-402 561-578 761-786 (STRAIN DUMAS) PHEMA_CDVO HEMAGGLUTININ- CANINE DISTEMPER VIRUS 36-53 200-223 NEURAMINIDASE (STRAIN ONDERSTEPOORT) PHEMA_CVBF HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS 391-415 PRECURSOR (STRAIN F15) PHEMA_CVBLY HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS 391-415 PRECURSOR (STRAIN LY-138) PHEMA_CVBM HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS 391-415 PRECURSOR (STRAIN MEBUS) PHEMA_CVBQ HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN 391-415 PRECURSOR QUEBEC), AND (STRAIN L9) PHEMA_CVHOC HEMAGGLUTININ-ESTERASE HUMAN CORONAVIRUS 391-415 PRECURSOR (STRAIN OC43) PHEMA_CVMA5 HEMAGGLUTININ-ESTERASE MURINE CORONAVIRUS MHV 402-423 PRECURSOR (STRAIN A59) PHEMA_CVMS HEMAGGLUTININ-ESTERASE MURINE CORONAVIRUS MHZ 403-418 PRECURSOR (STRAIN S) PHEMA_IAAIC HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/AICHI/2/68) PHEMA_IABAN HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/BANGKOK/1/79) PHEMA_IABUD HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/BUDGERIGAR/HOKKAIDO/77) PHEMA_IACKA HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/CHICKEN/ALALBAMA/1/75) PHEMA_IACKG HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 81-101 231-247 316-333 PRECURSOR A/CHICKEN/GERMANY/N/49) PHEMA_ICAKP HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 302-319 PRECURSOR A/CHICKEN/PENNSYLVANIA/1/83) PHEMA_IACKQ HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 302-319 PRECURSOR A/CHICKEN/PENNSYLVANIA/ 1370/83) PHEMA_IACKS HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 319-336 PRECURSOR A/CHICKEN/SCOTLAND/59) PHEMA_IACKV HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/CHICKEN/VICTORIA/1/85) PHEMA_IADA1 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/DUCK/ALBERTA/28/76) PHEMA_IADA3 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/DUCK/ALBERTA/78/76) PHEMA_IADCZ HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/DUCK/CZECHOSLOVAKIA/56) PHEMA_IADE1 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 266-287 319-336 PRECURSOR A/DUCK/ENGLAND/1/56) PHEMA_IADH1 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 306-323 PRECURSOR A/DUCK/HOKKAIDO/5/77) PHEMA_IADH2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/DUCK/HOKKAIDO/8/80) PHEMA_IADH3 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/DUCK/HOKKAIDO/33/80) PHEMA_IADH4 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/DUCK/HOKKAIDO/7/82) PHEMA_IADH5 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 215-237 PRECURSOR A/DUCK/HOKKAIDO/2/82) PHEMA_IADH6 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/DUCK/HOKKAIDO/9/85) PHEMA_IADH7 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/DUCK/HOKKAIDO/10/85) PHEMA_IADM2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/DUCK/MEMPHIS/928/74) PHEMA_IADMA HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 28-50 81-101 PRECURSOR A/DUCK/MANITOBA/1/53) PHEMA_IADNZ HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/DUCK/NEW ZEALAND/31/76) PHEMA_IADU3 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/DUCK/UKRAINE/1/63) PHEMA_IAEN6 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 A/ENGLAND/878/69) PHEMA_IAEN7 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/ENGLAND/321/77) PHEMA_IAFPR HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/FLOW PLAGUE VIRUS/ ROSTOCK/34) PHEMA_IAGRE HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/GREY TEAL/AUSTRALIA/2/79) PHEMA_IAGU2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/GULL/MARYLAND/704/77) PHEMA_IAGUA HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 319-336 PRECURSOR A/GULL/ASTRAKHAN/227/84) PHEMA_IAHAL HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 321-338 PRECURSOR A/EQUINE/ALGIERS/72) PHEMA_IAHC6 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/EQUINE/CAMBRIDGE/1/63) PHEMA_IAHC7 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/EQUINE/CAMBRIDGE/1/73) PHEMA_IAHCD HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/EQUINE/C DETROIT/1/64) PHEMA_IAHDE HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/EQUINE/DETROIT/1/64) PHEMA_IAHFO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSOR A/EQUINE/FONTAINEBLEAU/76) PHEMA_IAHK6 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 321-338 PRECURSOR A/EQUINE/KENTUCKY/2/86) PHEMA_IAHK7 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSOR A/EQUINE/KENTUCKY/1/87) PHEMA_IAHLE HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/EQUINE/LEXINGTON/1/66) PHEMA_IAHLO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/EQUINE/LONDON/1416/73) PHEMA_IAHMI HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSOR A/EQUINE/MIANI/1/63) PHEMA_IAHNM HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSOR A/EQUINE/NEW MARKET/76) PHEMA_IAHNN HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 315-332 PRECURSOR A/EQUINE/NEW MARKET/1/77) PHEMA_IAHPR HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 315-332 PRECURSOR A/EQUINE/PRAGUE/1/56) PHEMA_IAHRO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSOR A/EQUINE/ROMANIA/80) PHEMA_IAHSA HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSOR A/EQUINE/SANTIAGO/1/85) PHEMA_IAHSP HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/EQUINE/SAO PAULO/1/76) PHEMA_IAHSW HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/EQUINE/SWITZERLAND/137/72) PHEMA_IAHTE HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSOR A/EQUINE/TENNESSEE/5/86) PHEMA_IAHTO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSOR A/EQUINE/TOKYO/71) PHEMA_IAHUR HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSOR A/EQUINE/URUGUAY/1/63) PHEMA_IAJAP HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 317-334 PRECURSOR A/JAPAN/305/57) PHEMA_IAMAA HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 197-223 319-336 PRECURSOR A/MALLARD/ASTRAKHAN/244/82) PHEMA_IAMAB HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 202-228 324-341 PRECURSOR A/MALLARD/ASTRAKHAN/263/82) PHEMA_IAMAO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/MALLARD/NEW YORK/6874/78) PHEMA_IAME1 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/MEMPHIS/1/71) PHEMA_IAME2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/MEMPHIS/102/72) PHEMA_IAME6 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/MEMPHIS/6/86) PHEMA_IAMIN HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 85-101 231-247 316-333 PRECURSOR A/MINK/SWEDEN/84) PHEMA_IANT6 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/NT/60/68) PHEMA_IAPIL HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/PILOT WHALE/MAINE/328/84) PHEMA_IAQU7 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/QU/T/70) PHEMA_IARUD HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/RUDDY TURNSTONE/ NEW JERSEY/4/47 PHEMA_IASE2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/SEAL/MASSACHUSETTS/133/82) PHEMA_IASH2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 234-250 321-338 PRECURSOR A/SHEARWATER/AUSTRALIA/72) PHEMA_IASTA HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/STARLING/VICTORIA/5156/85) PHEMA_IATKM HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 33-55 320-337 PRECURSOR A/TURKEY/MINNESOTA/833/80) PHEMA_IATKO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 233-249 PRECURSOR A/TURKEY/ONTARIO/7732/66) PHEMA_IATKR HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 PRECURSOR A/TURKEY/OREGON/71) PHEMA_IATKW HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 229-245 PRECURSOR A/TURKEY/WISCONSIN/1/66) PHEMA_IAUDO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 380-397 PRECURSOR A/UDORN/307/72) PHEMA_IAV17 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 38-60 323-340 PRECURSOR A/VICTORIA/3/75) PHEMA_IAX31 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 PRECURSOR X-31) PHEMA_IAZCO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/SWINE/COLORADO/1/77) PHEMA_IAZH2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/SWINE/HONG KONG/81/78) PHEMA_IAZH3 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/SWINE/HONG KONG/126/82) PHEMA_IAZUK HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSOR A/SWINE/UKKEL/1/84) PHEMA_INBAA HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 115-131 295-310 PRECURSOR B/ANN ARBOR/1/86) PHEMA_INBBE HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 123-139 303-318 PRECURSOR B/BEUING/1/87) PHEMA_INBBO HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 116-132 293-308 PRECURSOR B/BONN/43) PHEMA_INBEN HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 123-139 301-316 PRECURSOR B/ENGLAND/222/82) PHEMA_INBFU HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 108-124 286-301 PRECURSOR B/FUKUOKA/80/81) PHEMA_INBGL HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 119-135 296-311 PRECURSOR B/GL/54) PHEMA_INBHK HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 116-132 293-308 PRECURSOR B/HONG KONG/8/73) PHEMA_INBIB HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 108-124 288-303 PRECURSOR B/IBARAK1/2/85) PHEMA_INBID HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 120-136 299-314 PRECURSOR B/ID/86) PHEMA_INBLE HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 123-139 302-317 PRECURSOR B/LEE/40) PHEMA_INBMD HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 113-129 292-307 PRECURSOR B/MARYLAND/59) PHEMA_INBME HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 116-132 296-311 PRECURSOR B/MEMPHIS/6/86) PHEMA_INBNA HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 108-124 288-303 B/NAGASAKI/1/87) PHEMA_INBOR HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 123-139 301-316 PRECURSOR B/OREGON/5/80) PHEMA_INBSI HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 123-139 301-316 PRECURSOR B/SINGAPORE/222/79) PHEMA_INBSJ HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 119-135 298-313 PRECURSOR B/SINGAPORE/64) PHEMA_INBUS HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 116-132 294-309 PRECURSOR B/USSR/100/83) PHEMA_INBVI HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 116-132 296-311 PRECURSOR B/VICTORIA/3/85) PHEMA_INBVK HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 123-139 303-318 PRECURSOR B/VICTORIA/2/87) PHEMA_INBYB HEMAGGLUTINI INFLUENZA B VIRUS (STRAIN 108-124 286-301 B/YAMAGATA/16/88) PHEMA_INCCA HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 442-466 PRECURSOR C/CALIFORNIA/78) PHEMA_INCEN HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 430-454 PRECURSOR C/ENGLAND/892/83) PHEMA_INCGL HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 430-454 PRECURSOR C/GREAT LAKES/1167/54) PHEMA_INCHY HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 429-453 C/HYOGO/1/83) PHEMA_INCJH HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 443-467 PRECURSOR C/JOHANNESBURG/1/66) PHEMA_INCKY HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 429-453 C/KYOTO/41/82) PHEMA_INCMI HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 429-453 PRECURSOR C/MISSISSIPPI/80) PHEMA_INCNA HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 429-453 C/NARA/82) PHEMA_INCP1 HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 430-454 PRECURSOR C/PIG/BEIJING/10/81) PHEMA_INCP2 HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 430-454 PRECURSOR C/PIG/BEIJING/115/81) PHEMA_INCP3 HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 430-454 PRECURSOR C/PIG/BEIJING/439/82) PHEMA_INCTA HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 430-454 PRECURSOR C/TAYLOR/1233/47) PHEMA_INCYA HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 430-454 PRECURSOR C/YAMAGATA/10/81) PHEMA_MUMP1 HEMAGGLUTININ- MUMPS VIRUS (STRAIN SBL-1) 101-125 133-148 225-246 367-394 397-417 NEURAMINIDASE PHEMA_MUMPM HEMAGGLUTININ- MUMPS VIRUS (STRAIN 101-125 133-148 225-246 367-394 397-417 NEURAMINIDASE MIYAHARA VACCINE) PHEMA_MUMPR HEMAGGLUTININ- MUMPS VIRUS (STRAIN RW) 101-125 133-148 225-246 367-394 397-417 NEURAMINIDASE PHEMA_MUMPS HEMAGGLUTININ- MUMPS VIRUS (STRAIN SBL) 101-125 133-148 NEURAMINIDASE PHEMA_NDVA HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN AUSTRALIA- VICTORIA/32) PHEMA_NDVB HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN BEAUDETTE C/45) PHEMA_NDVD HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN D26/76) PHEMA_NDVH4 HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN B1-HITCHNER/47) PHEMA_NDVI HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN ITALIEN/45) PHEMA_NDVM HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN MIYADERA/51) PHEMA_NDVQ HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN QUEENSLAND/66) PHEMA_NDVTG HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN TEXAS G B/48) PHEMA_NDVU HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN ULSTER/67) PHEMA_PHODV HEMAGGLUTININ- PHOCINE DISTEMPER VIRUS 36-58 213-234 493-513 NEURAMINIDASE PHEMA_PI1HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 1 VIRUS 29-53 322-342 345-360 486-503 NEURAMINIDASE (STRAIN WASHINGTON/1957) PHEMA_PI2H HEMAGGLUTININ- HUMAN PARAINFLUENZA 2 VIRUS 13-40 65-88 118-136 NEURAMINIDASE (PIV-2) PHEMA_PI2HT HEMAGGLUTININ- HUMAN PARAINFLUENZA 2 VIRUS 13-40 65-88 118-136 NEURAMINIDASE (STRAIN TOSHIBA) PHEMA_PI3B HEMAGGLUTININ- BOVINE PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE PHEMA_PI3H4 HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE (STRAIN N1H 47885) PHEMA_PI3HA HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE (STRAIN AUS/124854/74) PHEMA_PI3HT HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE (STRAIN TEX/545/80) PHEMA_PI3HU HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE (STRAIN TEX/9305/82) PHEMA_PI3HV HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE (STRAIN TEX/12677/83) PHEMA_PI3HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE (STRAIN WASH/641/79) PHEMA_PI3HX HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE (STRAIN WASH/1511/73) PHEMA_PI4HA HEMAGGLUTININ- HUMAN PARAINFLUENZA 4A 50-67 NEURAMINIDASE VIRUS (STRAIN TOSHIBA) PHEMA_RINDK HEMAGGLUTININ- RINDERPEST VIRUS (STRAIN 368-383 NEURAMINIDASE KABETE O) PHEMA_RINDL HEMAGGLUTININ- RINDERPEST VIRUS (STRAIN L) 4-30 NEURAMINIDASE PHEMA_SEND5 HEMAGGLUTININ- SENDAI VIRUS (STRAIN Z/HOST 322-342 NEURAMINIDASE MUTANTS) PHEMA_SENDF HEMAGGLUTININ- SENDAI VIRUS (STRAIN FUSHIMI) 322-342 NEURAMINIDASE PHEMA_SENDH HEMAGGLUTININ- SENDAI VIRUS (STRAIN HARRIS) 322-342 NEURAMINIDASE PHEMA_SENDJ HEMAGGLUTININ- SENDAI VIRUS (STRAIN HVJ) 322-342 NEURAMINIDASE PHEMA_SENDZ HEMAGGLUTININ- SENDAI VIRUS (STRAIN Z) 322-342 NEURAMINIDASE PHEMA_SV41 HEMAGGLUTININ- SIMIAN VIRUS 41 55-73 85-102 107-132 NEURAMINIDASE PHEMA_SV5 HEMAGGLUTININ- SIMIAN VIRUS 5 (STRAIN W3) 7-28 84-101 379-400 NEURAMINIDASE PHEMA_SV5CM HEMAGGLUTININ- SIMIAN VIRUS 5 (ISOLATE 7-28 84-101 379-400 NEURAMINIDASE CANINE/CP1−) PHEMA_SV5CP HEMAGGLUTININ- SIMIAN VIRUS 5 (ISOLATE 7-28 84-101 379-400 NEURAMINIDASE CANINE/CP1+) PHEMA_SV5LN HEMAGGLUTININ- 7-28 84-101 379-400 NEURAMINIDASE PHEMA_VACCC HEMAGGLUTININ VACCINIA VIRUS (STRAIN 173-192 PRECURSOR COPENHAGEN) PHEMA_VACCI HEMAGGLUTININ VACCINIA VIRUS (STRAIN IHD-J) 173-192 PRECURSOR PHEMA_VACCT HEMAGGLUTININ VACCINIA VIRUS (STRAIN TIAN 173-192 PRECURSOR TAN) PHEMA_VACCV HEMAGGLUTININ VACCINIA VIRUS (STRAIN WR) 173-192 PRECURSOR PHEMA_VARV HEMAGGLUTININ VARIOLA VIRUS 175-194 PRECURSOR PHEX8_ADE02 HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 2 38-61 119-140 PROTEIN PRECURSOR PHEX8_ADE03 HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 3 27-48 PROTEIN PRECURSOR PHEX8_ADE05 HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 5 38-61 119-140 PROTEIN PRECURSOR PHEX8_ADE41 HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 41 38-61 128-146 PROTEIN PRECURSOR PHEX8_ADEM1 HEXON-ASSOCIATED MOUSE ADENOVIRUS TYPE 1 36-52 PROTEIN PRECURSOR PHEX9_ADE07 HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 7 92-117 PROTEIN AND 3 PHEX9_ADEC2 HEXON-ASSOCIATED CANINE ADENOVIRUS TYPE 2 52-77 PROTEIN PHEX9_ADENT HEXON-ASSOCIATED TUPAIA ADENOVIRUS 60-82 PROTEIN PHRG_COWPX HOST RANGE PROTEIN COWPOX VIRUS 517-533 558-583 609-636 PI177_ASFB7 LATE PROTEIN I177L AFRICAN SWINE FEVER VIRUS 68-83 (STRAIN BA71V) PI196_ASFB7 LATE PROTEIN I196L AFRICAN SWINE FEVER VIRUS 169-190 (STRAIN BA71V) PI226_ASFB7 LATE PROTEIN I226R AFRICAN SWINE FEVER VIRUS 60-77 (STRAIN BA71V) PI329_ASFB7 LATE PROTEIN I329L AFRICAN SWINE FEVER VIRUS 239-260 PRECURSOR (STRAIN BA71V) PI78_ASFB7 EARLY PROTEIN I78R AFRICAN SWINE FEVER VIRUS 2-29 (STRAIN BA71V) PIBMP_SOCMV INCLUSION BODY MATRIX SOYBEAN CHLOROTIC MOTTLE 97-119 PROTEIN VIRUS PIC18_EBV PROBABLE PROCESSING AND EPSTEIN-BARR VIRUS 101-123 131-153 759-777 TRANSPORT PROTEIN (STRAIN B95-8) PIC18_HCMVA PROBABLE PROCESSING AND HUMAN CYTOMEGALOVIRUS 156-176 202-222 TRANSPORT PROTEIN (STRAIN AD169) PIC18_HSV11 PROCESSING AND HERPEX SIMPLEX VIRUS 8-29 45-61 122-143 751-768 TRANSPORT PROTEIN (TYPE 1/STRAIN 17) PIC18_HSV1A PROCESSING AND HERPES SIMPLEX VIRUS 8-29 45-61 122-143 751-768 TRANSPORT PROTEIN (TYPE 1/STRAIN ANGELOTTI) PIC18_HSV1F PROCESSING AND HERPES SIMPLEX VIRUS 8-29 122-143 746-763 TRANSPORT PROTEIN (TYPE 1/STRAIN F) PIC18_HSVB2 PROBABLE PROCESSING AND BOVINE HERPESVIRUS TYPE 2 12-37 130-151 TRANSPORT PROTEIN (STRAIN BMV) PIC18_HSVEB PROBABLE PROCESSING AND EQUINE HERPESVIRUS TYPE 1 37-56 129-144 732-755 TRANSPORT PROTEIN PIC18_HSVSA PROBABLE PROCESSING AND HERPESVIRUS SAIMIRI 27-29 51-78 647-672 TRANSPORT PROTEIN (STRAIN 11) PIC18_MCMVS PROBABLE PROCESSING AND MURINE CYTOMEGALOVIRUS 126-144 202-229 386-411 TRANSPORT PROTEIN (STRAIN SMITH) PIC18_PRVIF PROBABLE PROCESSING AND PSEUDORABIES VIRUS (STRAIN 285-307 698-718 TRANSPORT PROTEIN INDIANA-FUNKHAUSER/BECKER) PIC18_VZVD PROBABLE PROCESSING AND VARICELLA-ZOSTER VIRUS 69-88 619-639 725-744 TRANSPORT PROTEIN (STRAIN DUMAS) PICP0_HSV11 IMMEDIATE-EARLY PROTEIN HERPES SIMPLEX VIRUS 668-684 (TYPE 1/STRAIN 17) PICP0_HSV2H VMW118 PROTEIN HERPES SIMPLEX VIRUS 713-729 (TYPE 2/STRAIN HG52) PICP0_PRVIF EARLY PROTEIN 0 PSEUDORABIES VIRUS (STRAIN 82-102 INDIANA-FUNKHAUSER/BECKER) PICP3_HSV1F INFECTED CELL PROTEIN HERPES SIMPLEX VIRUS 211-227 (TYPE 1/STRAIN F) PICP4_HSV11 TRANS-ACTING HERPES SIMPLEX VIRUS 81-98 621-637 TRANSCRIPTIONAL PROTEIN (TYPE 1/STRAIN 17) PICP4_HSVEB TRANS-ACTING EQUINE HERPESVIRUS TYPE 1 708-725 736-759 TRANSCRIPTIONAL PROTEIN (STRAIN AB4P) PICP4_HSVEK TRANS-ACTING EQUINE HERPESVIRUS TYPE 1 708-725 736-759 TRANSCRIPTIONAL PROTEIN (STRAIN KENTUCKY A) PICP4_HSVMG TRANS-ACTING MAREK'S DISEASE HERPESVIRUS 488-506 585-611 1202-1218 TRANSACTIVATOR PROTEIN (STRAIN GA) PICP4_VZVD TRANS-ACTING VARICELLA-ZOSTER VIRUS 547-563 TRANSCRIPTIONAL PROTEIN (STRAIN DUMAS) PIE18_PRVIF IMMEDIATE-EARLY PSEUDORABIES VIRUS (STRAIN 731-748 PROTEIN IE180 INDIANA-FUNKHAUSER/BECKER) PIE18_PRVKA IMMEDIATE-EARLY PSEUDORABIES VIRUS 720-737 PROTEIN IE180 (STRAIN KAPLAN) PIE63_HCMVA TRANSCRIPTIONAL HUMAN CYTOMEGALOVIRUS 286-304 364-383 REGULATOR IE63 HOMOLOG ( (STRAIN AD169) PIE63_HSV1I TRANSCRIPTIONAL HERPES SIMPLEX VIRUS 378-394 REGULATOR IE63 (TYPE 1/STRAIN 17) PIE63_HSV2H TRANSCRIPTIONAL HERPES SIMPLEX VIRUS 378-394 REGULATOR IE63 (TYPE 2/STRAIN HG52) PIE63_HSVEB TRANSCRIPTIONAL EQUINE HERPESVIRUS TYPE 1 337-353 385-406 REGULARTOR IE63 HOMOLOG (STRAIN AB4P) PIE63_HSVSA 52 KD IMMEDIATE-EARLY HERPESVIRUS SAIMIRI 301-326 PHOSPHOPROTEIN (STRAIN 11) PIE68_HSV11 IMMEDIATE-EARLY HERPES SIMPLEX VIRUS 189-205 PROTEIN IE68 (TYPE 1/STRAIN 17) PIE68_HSVE4 IMMEDIATE-EARLY EQUINE HERPESVIRUS TYPE 4 81-104 PROTEIN IE68 PIE68_HSVEB IMMEDIATE-EARLY PROTEIN EQUINE HERPESVIRUS TYPE 1 93-116 PIE68_PRVKA IMMEDIATE-EARLY PROTEIN PSEUDORABIES VIRUS 85-108 (STRAIN KAPLAN) PEI68_VZVD GENE 63/70 PROTEIN VARICELLA-ZOSTER VIRUS 57-78 (STRAIN DUMAS) PIR14_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 117-137 (STRAIN AD169) PKERB_AVIER ERBB TYROSINE KINASE AVIAN ERYTHROBLASTOSIS 64-84 297-324 TRANSFORMING PROTEIN VIRUS PKFES_FSVGA TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 73-88 TRANSFORMING PROTEIN (STRAIN GARDNER-ARNSTEIN) PKFES_FSVST TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 2-22 TRANSFORMING PROTEIN (STRAIN SNYDER-THEILEN) PKFGR_FSVGR TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 269-288 TRANSFORMING PROTEIN (STRAIN GARDNER-RASHEED) PKFMS_FSVMD FMS TYROSINE KINASE FELINE SARCOMA VIRUS 141-159 243-263 434-450 548-563 781-801 856-877 TRANSFORMING PROTEIN (STRAIN MCDONOUGH) PKFPS_AVISP TYROSINE-PROTEIN KINASE AVIAN SARCOMA VIRUS 247-274 TRANSFORMING PROTEIN (STRAIN PRC11) PKFPS_FUJSV TYROSINE-PROTEIN KINASE FUJIAMI SARCOMA VIRUS 259-275 346-370 400-420 587-614 TRANSFORMING PROTEIN PKITH_ASFB7 THYMIDINE KINASE AFRICAN SWINE FEVER VIRUS 18-41 (STRAIN BA71V) PKITH_EBV THYMIDINE KINASE EPSTEIN-BARR VIRUS 403-418 428-446 (STRAIN B95-8) PKITH_FLDV THYMIDINE KINASE FISH LYMPHOCTSTIS DISEASE 96-117 252-275 VIRUS PKITH_HSV11 THYMIDINE KINASE HERPES SIMPLEX VIRUS 223-249 (TYPE 1/STRAIN 17) PKITH_HSV1C THYMIDINE KINASE HERPES SIMPLEX VIRUS 223-249 (TYPE 1/STRAIN CL101) PKITH_HSV1E THYMIDINE KINASE HERPES SIMPLEX VIRUS 223-249 (TYPE 1/STRAIN HFEM) PKITH_HSV1K THYMIDINE KINASE HERPES SIMPLEX VIRUS 223-249 (TYPE 1/STRAIN KOS) PKITH_HSV1S THYMIDINE KINASE HERPES SIMPLEX VIRUS 223-249 (TYPE 1/STRAIN SC16) PKITH_HSV23 THYMIDINE KINASE HERPES SIMPLEX VIRUS 224-250 333-348 (TYPE 2/STRAIN 333) PKITH_HSVB6 THYMIDINE KINASE BOVINE HERPESVIRUS TYPE 1 193-219 280-304 (STRAIN 6660) PKITH_HSVBH THYMIDINE KINASE BOVINE HERPESVIRUS TYPE 2 180-202 (STRAIN BHM-1) PKITH_HSVBM THYMIDINE KINASE BOVINE HERPERVIRUS TYPE 3 381-399 609-633 (STRAIN WC11) PKITH_HSVBQ THYMIDINE KINASE BOVINE HERPESVIRUS TYPE 1 2 194-220 282-306 (STRAIN Q3932) PKITH_HSVE4 THYMIDINE KINASE EQUINE HERPESVIRUS TYPE 4 174-193 261-284 (STRAIN 1942) PKITH_HSVEB THYMIDINE KINASE EQUINE HERPESVIRUS TYPE 1 18-33 174-193 274-298 (STRAIN AB4P) AND (ISOLATE HVS25A) PKITH_HSVF THYMIDINE KINASE FELINE HERPESVIRUS 171-189 (FELID HERPESVIRUS 1) PKITH_HSV11 THYMIDINE KINASE ICTALURID HERPESVIRUS 1 14-32 PKITH_HSVMR THYMIDINE KINASE MARMOSET HERPESVIRUS 189-215 PKITH_HSVSA THYMIDINE KINASE HERPESVIRUS SAIMIRI 208-232 (STRAIN 11) PKITH_ILTVT THYMIDINE KINASE INFECTIOUS 183-202 208-234 LARYNGOTRACHEITIS VIRUS (STRAIN THORNE V882) PKITH_VZV4 THYMIDINE KINASE VARICELLA-ZOSTER VIRUS 197-216 (ACYCLOVIR-RESISTANT STRAIN 40A2) PKITH_VZV7 THYMIDINE KINASE VARICELLA-ZOSTER VIRUS 197-216 (ACYCLOVIR-RESISTANT STRAIN 7-1-3) PKITH_VZVD THYMIDINE KINASE VARICELLA-ZOSTER VIRUS 197-216 (STRAIN DUMAS) PKITH_VZVG THYMIDINE KINASE VARICELLA-ZOSTER VIRUS 197-216 (ACYCLOVIR-RESISTANT STRAIN GK) PKITH_VZVW THYMIDINE KINASE VARICELLA-ZOSTER VIRUS (VZV) 197-216 PKKIT_FSVHZ KIT TYROSINE KINASE FELINE SARCOMA VIRUS 192-214 276-297 TRANSFORMING PROTEIN (STRAIN HARDY-ZUCKERMAN 4) PKR15_HSV11 GENE 15 PROTEIN KINASE ICTALURID HERPESVIRUS 1 151-167 358-374 PKR16_HSV11 GENE 16 PROTEIN KINASE ICTALURID HERPESVIRUS 1 197-217 286-311 PKR1_HSV11 SERINE/THREONINE-PROTEIN HERPES SIMPLEX VIRUS 280-296 358-377 KINASE (TYPE 1/STRAIN 17) PKR1_HSV2 SERINE/THREONINE-PROTEIN HERPES SIMPLEX VIRUS 276-296 358-377 KINASE (TYPE 2) PKR1_HSVEB SERINE/THREONINE-PROTEIN EQUINE HERPESVIRUS TYPE 1 289-307 KINASE (STRAIN AB4P) PKR1_HSVEK SERINE/THREONINE-PROTEIN EQUINE HERPESVIRUS TYPE 1 289-307 KINASE (STRAIN KENTUCKY A) PKR1_VZVD SERINE/THREONINE-PROTEIN VARICELLA-ZOSTER VIRUS 179-197 KINASE (STRAIN DUMAS) PKR2_EBV PROBABLE EPSTEIN-BARR VIRUS 196-211 313-338 SERINE/THREONINE- (STRAIN B95-8) PROTEIN KINASE PKR2_HSV11 PROBABLE HERPES SIMPLEX VIRUS 247-267 SERINE/THREONINE- (TYPE 1/STRAIN 17) PROTEIN KINASE PKR2_HSVEB PROBABLE EQUINE HERPESVIRUS TYPE 1 317-339 441-462 SERINE/THREONINE- (STRAIN AB4P) PROTEIN KINASE PKR2_PRVN3 SERINE/THREONINE- PSEUDORABIES VIRUS 164-185 282-305 PROTEIN KINASE 2 (STRAIN NIA-3) PKR2_VZVD PROBABLE VARICELLA-ZOSTER VIRUS 116-131 226-247 354-373 SERINE/THREONINE- (STRAIN DUMAS) PROTEIN KINASE PKR73_HSV11 GENE 73 PROTEIN KINASE ICTALURID HERPESVIRUS 1 841-858 PKRB1_VACCC GENE 74 PROTEIN KINASE ICTALURID HERPESVIRUS 1 359-380 548-575 PKRB1_VACCC 30 KD PROTEIN KINASE VACCINIA VIRUS 199-214 HOMOLOG (STRAIN COPENHAGEN) PKRB1_VACCV 30 KD PROTEIN KINASE VACCINIA VIRUS 199-214 HOMOLOG (STRAIN WR) PKRB1_VARV 30 KD PROTEIN KINASE VARIOLA VIRUS 199-214 HOMOLOG PKRF1_SFVKA POSSIBLE PROTEIN KINASE SHOPE FIBROMA VIRUS 83-98 C20 (STRAIN KASZA) PKRF1_VACCC POSSIBLE PROTEIN KINASE VACCINIA VIRUS 85-100 F10 (STRAIN COPENHAGEN) PKRF1_VACCP POSSIBLE PROTEIN KINASE VACCINIA VIRUS 52-67 F10 (STRAIN L-IVP) PKRF1_VARV POSSIBLE PROTEIN KINASE VARIOLA VIRUS 85-100 F10 PKROS_AVISU ROS TYR KINASE AVIAN SARCOMA VIRUS 6-29 202-223 284-305 TRANSFORMING PROTEIN (STRAIN UR2) PKRYK_AVIR3 TYR-PROTEIN KINASE AVIAN RETROVIRUS RPL30 154-172 221-241 TRANSFORMING PROTEIN R PKSEA_AVIET TYR-PROTEIN KINASE AVIAN ERYTHROBLASTOSIS 158-177 TRANSFORMING PROTEIN SE VIRUS (STRAIN S13) PKSRC_AVIS2 TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAIN PR2257) PKSRC_AVISR TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAIN RASV1441) PKSRC_AVISS TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAIN S1) PKSRC_AVIST TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAIN S2) PKSRC_RSVH1 TYR-PROTEIN KINASE ROUS SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAIN H-19) PKSRC_RSVP TYR-PROTEIN KINASE ROUS SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAIN PRAGUE C) PKSRC_RSVPA TYR-PROTEIN KINASE ROUS SARCOMA VIRUS 358-374 TRANSFORMING PROTEIN SR (STRAIN PA101T) PKSRC_RSVSR TYR-PROTEIN KINASE ROUS SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAIN SCHMIDT-RUPPIN) PKYES_AVISY TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN Y (STRAIN Y73 PL100_ADE02 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 489-511 PL100_ADE05 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 489-511 PL100_ADE41 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 41 458-480 PL52_ADE02 LATE L1 52 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 237-259 PL52_ADE05 LATE L1 52 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 237-259 PLEC1_FOWPM HEPATIC LECTIN HOMOLOG FOWLPOX VIRUS (ISOLATE 2-26 HP-438(MUNICH)) PLMP1_EBV LATENT MEMBRANE EPSTEIN-BARR VIRUS 20-43 79-100 PROTEIN 1 (STRAIN B95-8) PLMP1_EBVC LATENT MEMBRANE EPSTEIN-BARR VIRUS 20-43 79-100 PROTEIN 1 (STRAIN B95-8) PLMP1_EBVR LATENT MEMBRANE EPSTEIN-BARR VIRUS 20-43 79-100 PROTEIN 1 (STRAIN B95-8) PLMP2_EBV GENE TERMINAL PROTEIN EPSTEIN-BARR VIRUS 181-196 204-226 267-288 291-315 346-369 390-410 (STRAIN B95-8) PMCEL_SFVKA MRNA CAPPING ENZYME, SHOPE FIBROMA VIRUS 244-260 556-578 679-699 LARGE SUBUNIT (STRAIN KASZA) PMCEL_VACCC MRNA CAPPING ENZYME, VACCINIA VIRUS 81-102 265-282 289-312 687-707 LARGE SUBUNIT (STRAIN COPENHAGEN) PMCEL_VACCV MRNA CAPPING ENZYME, VACCINIA VIRUS (STRAIN WR) 81-102 265-282 289-312 687-707 LARGE SUBUNIT PMCEL_VARV MRNA CAPPING ENZYME, VARIOLA VIRUS 81-102 265-282 289-312 687-707 LARGE SUBUNIT PMCE_ASFB7 MRNA CAPPING ENZYME AFRICAN SWINE FEVER VIRUS 217-243 (STRAIN BA71V) PMCE_REOVD MRNA CAPPING ENZYME REOVIRUS (TYPE 3/STRAIN 358-383 567-588 714-741 DEARING) PMOVP_CGMVS MOVEMENT PROTEIN CUCUMBER GREEN MOTTLE 157-172 MOSAIC VIRUS (WATERMELON STRAIN S) PMOVP_CGMVW MOVEMENT PROTEIN CUCUMBER GREEN MOTTLE 157-172 MOSAIC VIRUS (WATERMELON STRAIN PMOVP_ORSV MOVEMENT PROTEIN ODONTOGLOSSUM RINGSPOT 49-74 178-205 VIRUS PMOVP_PPMVS MOVEMENT PROTEIN PEPPER MILD MOTTLE VIRUS 25-50 186-201 (STRAIN SPAIN) PMOVP_TMGMV MOVEMENT PROTEIN TOBACCO MILD GREEN MOSAIC 186-201 (TMV STRAIN U2) PMOVP_TMVCO MOVEMENT PROTEIN TOBACCO MOSAIC VIRUS 88-107 156-171 (STRAIN COWPEA) PMTC1_CHVN1 MODIFICATION CHOLRELLA VIRUS NC-1A 129-156 METHYLASE CVIBI PMTC2_CHVP1 MODIFICATION PARAMECIUM BURSARIA 72-94 METHYLASE CVIAII CHLORELLA VIRUS 1 ( PMTC3_CHVN1 MODIFICATION CHLORELLA VIRUS NC-1A 177-192 265-286 METHYLASE CVIBII PMYBE_AVILE P135-GAG-MYB-ETS AVIAN LEUKEMIA VIRUS E26 104-124 TRANSORMING PROTEIN ( PMYB_AVIMB MYB TRANFORMING PROTEIN AVIAN MYELOBLASTOSIS VIRUS 218-238 301-326 PNCAP_AINOV NUCLEOCAPSID PROTEIN AINO VIRUS 159-181 PNCAP_BUNLC NUCLEOCAPSID PROTEIN BUNYAVIRUS LA CROSSE 84-99 PNCAP_BUNSH NUCLEOCAPSID PROTEIN BUNYAVIRUS SNOWSHOE HARE 84-99 PNCAP_CDVO NUCLEOCAPSID PROTEIN CANINE DISTEMPER VIRUS 31-50 (STRAIN ONDERSTEPOORT) PNCAP_FIPV NUCLEOCAPSID PROTEIN FELINE INFECTIOUS PERITONITIS 57-74 VIRUS (STRAIN 79-1146) PNCAP_HANTV NUCLEOCAPSID PROTEIN HANTAAN VIRUS (STRAIN 76-118) 317-342 PNCAP_HAZVJ NUCLEOCAPSID PROTEIN HAZARA VIRUS (ISOLATE JC280) 428-446 PNCAP_IHNV NUCLEOCAPSID PROTEIN INFECTIOUS HEMATOPOIETIC 110-137 239-265 NECROSIS VIRUS (STRAIN ROUND BUT PNCAP_INSV NUCLEOCAPSID PROTEIN IMPATIENS NECROTIC SPOT 155-179 VIRUS PNCAP_MEASE NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN 40-59 EDMONSTON) PNCAP_MEASH NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN HALLE) 40-59 PNCAP_MEASY NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN 40-59 YAMAGATA-1) PNCAP_MUMP1 NUCLEOCAPSID PROTEIN MUMPS VIRUS (STRAIN SBL-1) 156-178 PNCAP_MUMPM NUCLEOCAPSID PROTEIN MUMPS VIRUS (STRAIN 156-178 MIYAHARA VACCINE) PNCAP_PHV NUCLEOCAPSID PROTEIN PROSPECT HILL VIRUS 36-58 218-236 256-277 321-346 PNCAP_PI1HC NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 42-58 86-102 (STRAIN C39) PNCAP_PI1HW NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 42-58 86-102 (STRAIN WASHINGTON/1957) PNCAP_PI3B NUCLEOCAPSID PROTEIN BOVINE PARAINFLUENZA 3 VIRUS 163-184 PNCAP_HI3H4 NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 3 VIRUS 163-184 (STRAIN NIH 47885) PNCAP_PUUMP NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN 36-58 321-346 HALLNAS B1) PNCAP_PUUMS NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN 36-58 218-236 321-346 SOTKAMO) PNCAP_RABVA NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN AVOI) 299-322 PNCAP_RABVP NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN PV) 299-322 PNCAP_RABVS NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN SAD B19) 299-322 PNCAP_RVFVZ NUCLEOCAPSID PROTEIN RIFT VALLEY FEVER VIRUS 158-180 (STRAIN ZH-548 M12) PNCAP_SEND5 NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z/ 29-51 86-102 HOST MUTANTS) PNCAP_SENDE NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN ENDERS) 42-58 86-102 PNCAP_SENDH NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN HARRIS) 42-58 86-102 PNCAP_SENDZ NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z) 29-51 86-102 PNCAP_SEOUS NUCLEOCAPSID PROTEIN SEOUL VIRUS (STRAIN SR-11) 112-138 317-342 PNCAP_SFSV NUCLEOCAPSID PROTEIN SANDFLY FEVER SICILIAN VIRUS 156-181 PNCAP_TACV NUCLEOCAPSID PROTEIN TACARIBE VIRUS 219-241 PNCAP_UUK NUCLEOCAPSID PROTEIN UUKUNIEMI VIRUS 167-189 PNCAP_VHSV0 NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC 240-266 SEPTICEMIA VIRUS (STRAIN 07-71) PNCAP_VHSVM NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC 240-266 SPETICEMIA VIRUS (STRAIN MAKAH) PNCAP_VSVJO NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS 64-80 SEROTYPE NEW JERSEY/ STRAIN OG PNCAP_VSVSJ PNEF_HV2RO NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY 110-129 VIRUS TYPE 2 (ISOLATE ROD) PNEF_HV2ST NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY 106-128 VIRUS TYPE 2 (ISOLSTE ST) PNRAM_IABDA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29 A/BLACK DUCK/AUSTRALIA/ 702/78) PNRAM_IACHI NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-24 A/CHILE/1/83) PNRAM_IADA1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-24 A/DUCK/ALBERTA/28/76) PNRAM_IADGE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29 A/DUCK/GERMANY/49) PNRAM_IAFPW NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29 301-317 A/FOWL PLAGUE VIRUS/ WEYBRIDGE) PNRAM_IAHCO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 299-315 A/EQUINE/COR/16/74) PNRAM_IAHK1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29 A/EQUINE/KENTUCKY/1/81) PNRAM_IAKIE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-24 A/KIEV/59/79) PNRAM_IALEN NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-24 A/LENINGRAD/54/1) PNRAM_IAME1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-30 A/MEMPHIS/1/71H-A/ BELLAMY/42N) PNRAM_IAPAR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-30 A/PARROT/ULSTER/73) PNRAM_IAPUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-30 A/PUERTO RICO/8/34) PNRAM_IARUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29 A/RUDDY TURNSTONE/ NEW JERSEY/60/ PNRAM_IASH2 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29 A/SHEARWATER/AUSTRALIA/72) PNRAM_IATKR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-24 56-77 A/TURKEY/OREGON/71) PNRAM_IATRA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29 A/TERN/AUSTRALIA/G70C/75) PNRAM_IAUSS NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-24 A/USSR/90/77) PNRAM_IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29 A/WHALE/MAINE/1/84) PNRAM_IAWIL NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-30 A/WILSON-SMITH/33) PNRAM_INBBE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN 3-20 B/BEIJING/1/87) PNRAM_INBHK NEURAMINIDASE INFLUENZA B VIRUS (STRAIN 3-20 B/HONG KONG/8/73) PNRAM_INBLE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN 3-20 B/LEE/40) PNRAM_INBLN NEURAMINIDASE INFLUENZA B VIRUS (STRAIN 3-20 B/LENNINGRAD/179/86) PNRAM_INBMD NEURAMINIDASE INFLUENZA B VIRUS (STRAIN 3-20 B/MARYLAND/59) PNRAM_INBMF NEURAMINIDASE INFLUENZA B VIRUS (STRAIN 3-20 B/MEMPHIS/3/89) PNRAM_INBOR NEURAMINIDASE INFLUENZA B VIRUS (STRAIN 3-20 B/OREGON/5/80) PNRAM_INBSI NEURAMINIDASE INFLUENZA B VIRUS (STRAIN 3-20 B/SINGAPORE/222/79) PNRAM_INBUS NEURAMINIDASE INFLUENZA B VIRUS (STRAIN 3-20 B/USSR/100/83) PNRAM_INBVI NEURAMINIDASE INFLUENZA B VIRUS (STRAIN 3-20 B/VICTORIA/3/85) PNS1_SIDEV PROBABLE NONSTRUCTURAL BOMBYX DENSONUCLEOSIS 135-151 PROTEIN PRECURSO VIRUS PNS2_SIDEV PROBABLE STRUCTURAL BOMBYX DENSONUCLEOSIS 2-26 196-221 783-806 PROTEIN PRESURSOR VIRUS PNS3_SIDEV PROBABLE NONSTRUCTURAL BOMBYX DENSONUCLEOSIS 60-78 PROTEIN PRECURSOR VIRUS PNSS_TSWVB NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS 80-105 431-455 (BRAZILIAN IOSLOATE CPNH1/ BR-01) PNSS_TSWVL NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS 80-105 436-458 (STRAIN L3) PNTP1_VACCC NUCLEOSIDE VACCINIA VIRUS (STRAIN 20-45 387-403 TRIPHOSPHATASE I COPENHAGEN) PNTP1_VACCV NUCLEOSIDE VACCINIA VIRUS (STRAIN WR) 20-45 387-403 TRIPHOSPHATASE I PNTP1_VARV NUCLEOSIDE VARIOLA VIRUS 293-309 TRIPHOSPHATASE I PP100_HSV6U MAJOR ANTIGENIC HERPES SIMPLEX VIRUS (TYPE 6/ 182-204 250-270 344-366 STRUCTURAL PROTEIN STRAIN UGANDA-1102) PPAP2_FOWPV POLY(A) POLYMERASE FOWLPOX VIRUS 79-100 REGULATORY SUBUNIT PPAP2_MYXVA POLY(A) POLYMERASE MYXOMA VIRUS (ISOLATE AUST/ 101-116 REGULATORY SUBUNIT URIARRA/VERG-86/1) PPAP2_VACCC POLY(A) POLYMERASE VACCINIA VIRUS (STRAIN 101-116 REGULATORY SUBUNIT COPENHAGEN) PPAP2_VACCV POLY(A) POLYMERASE VACCINIA VIRUS (STRAIN WR) 101-116 REGULATORY SUBUNIT PPAP2_VARV POLY(A) POLYMERASE VARIOLA VIRUS 101-116 REGULATORY SUBUNIT PPCNA_NPVAC PROLIFERATING CELL AUTOGRAPHA CALIFORNICA 67-89 227-244 NUCLEAR ANTIGEN NUCLEAR POLYHEDROSIS VIRUS PPE21_NPVOP 21 2 KD PROTEIN IN PE ORGYIA PSEUDOTSUGATA 117-139 5′REGION MULTICAPSID POLYHEDROSIS VIRUS PPE25_NPVAC 25 1 KD PROTEIN IN PE-P26 AUTOGRAPHA CALIFORNICA 57-83 INTERGENIC REGION NUCLEAR POLYHEDROSIS VIRUS PPE38_NPVAC MAJOR IMMEDIATE EARLY AUTOGRAPHA CALIFORNICA 17-33 PROTEIN NUCLEAR POLYHEDROSIS VIRUS PPEN3_ADE02 PENTON PROTEIN HUMAN ADENOVIRUS TYPE 2 171-195 PPEN3_ADE05 PENTON PROTEIN HUMAN ADENOVIRUS TYPE 5 171-195 PPEN3_ADEGX PENTON PROTEIN AVIAN ADENOVIRUS GAL10 194-214 307-324 (STRAIN SA2) PPIV2_ADE07 MATURATION PROTEIN HUMAN ADENOVIRUS TYPE 7 412-431 PPIV2_ADEM1 MATURATION PROTEIN MOUSE ADENOVIRUS TYPE 1 409-428 PPOL1_BAYMG GENOME POLYPROTEIN 1 BARLEY TELLOW MOSAIC VIRUS 739-755 835-856 1072-1094 1889-1910 (GERMAN ISOLATE) PPOL1_BAYMJ GENOME POLYPROTEIN 1 BARLEY TELLOW MOSAIC VIRUS 739-755 835-856 1072-1094 1465-1485 1888-1909 (JAPANESE STRAIN II-1) PPOL1_GCMV RNA1 POLYPROTEIN HUMGARIAN GRAPEVINE 691-717 1040-1062 1116-1143 CHROME MOSAIC VIRUS PPOL1_GFLV RNA1 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 380-396 477-503 545-564 1079-1098 1149-1171 1341-1356 1761-1785 1821-1848 2020-2044 PPOL1_TBRVS RNA1 POLYPROTEIN TOMATO BLACK RING VIRUS 1132-1159 (STRAIN S) PPOL2_ARMV RNA2 POLYPROTEIN ARABIS MOSAIC VIRUS 129-150 243-266 346-367 PPOL2_BAYMG GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 325-350 463-485 (GERMAN ISOLATE) PPOL2_BAYMJ GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 325-350 463-485 (JAPANSES STRAIN II-1) PPOL2_GFLV RNA2 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 808-829 1021-1045 PPOL2_TBRVS RNA2 POLYPROTEIN TOMATO BLACK RING VIRUS 425-446 541-557 856-876 1203-1223 (STRAIN S) PPOL2_TRSVR RNA2 POLYPROTEIN TOMATO RINGSPOT VIRUS 316-340 427-448 1527-1554 (ISOLATE RASPBERRY) PPOLG_BOVEV GENOME POLYPROTEIN BOVINE ENTEROVIRUS 1833-1859 (STRAIN VG-5-27) PPOLG_BVDVN GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 627-653 943-965 1119-1134 1282-1297 1363-1387 1868-1892 2460-2487 2608-2628 2883-2898 (ISOLATE NADL) 3141-3161 3220-3241 3856-3871 3967-3986 PPOLG_BVDVS GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 627-653 943-965 1119-1134 1138-1134 1189-1205 1282-1297 1363-1387 1778-1802 2370-2397 (STRAIN SD-1) 2518-2538 2741-2766 2793-2808 3766-3781 PPOLG_COXA2 GENOME POLYPROTEIN COXSACKIEVIRUS A21 850-867 (STRAIN COE) PPOLG_COXA3 GENOME POLYPROTEIN COXSACKIEVIRUS A23 67-92 (ECHO 9 VIRUS) PPOLG_COXA9 GENOME POLYPROTEIN COXSACKIEVIRUS A9 1491-1517 1601-1626 (STRAIN GRIGGS) PPOLG_COXB1 GENOME POLYPROTEIN COXSACKIEVIRUS B1 1472-1498 1582-1607 PPOLG_COXB3 GENOME POLYPROTEIN COXSACKEIVIRUS B3 228-255 1475-1501 1585-1610 PPOLG_COXB4 GENOME POLYPROTEIN COXSACKIEVIRUS B4 821-846 1473-1499 1583-1608 PPOLG_COXB5 GENOME POLYPROTEIN COXSACKIEVIRUS B5 1475-1501 1585-1610 PPOLG_DENIS GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 918-943 1111-1138 1211-1236 1243-1260 1612-1628 2222-2248 2348-2365 2401-2426 3050-3069 SINGAPORE S275/90) PPOLG_DEN1W GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 919-944 1112-1139 WESTERN PACIFIC) PPOLG_DEN23 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (ISOLATE 336-354 MALAYSIA M3) PPOLG_DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 848-868 919-944 1112-1139 1244-1261 1283-1301 1613-1629 2293-2318 2347-2364 2405-2425 16681) 2700-2726 PPOLG_DEN27 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 848-868 919-944 1112-1139 1244-1261 1283-1301 1376-1396 1613-1629 2293-2318 2347-2364 16681-PDK53) 2405-2425 2700-2726 PPOLG_DEN2D GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 848-868 919-944 (STRAIN D2-04) PPOLG_DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 848-868 919-944 1112-1139 1244-1261 1376-1396 1613-1629 2293-2318 2347-2364 2405-2425 (STRAIN JAMAICA) 2700-2726 PPOLG_DEN2N GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 100-120 171-196 364-391 (STRAIN NEW GUINEA C) PPOLG_DEN2P GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 919-944 1112-1139 1244-1261 1283-1301 1376-1396 1613-1629 2290-2315 2344-2361 2402-2422 (STRAIN PR159/51) 2697-2723 PPOLG_DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 639-664 832-859 964-981 1203-1219 (STRAIN TONGA 1974) PPOLG_DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 917-942 1210-1228 1242-1259 1174-1194 1611-1627 2141-2162 2221-2247 2146-2361 2199-2424 2698-2724 3048-3067 PPOLG_DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4 1209-1227 1241-1258 1611-1627 2220-2246 2342-2359 2400-2420 3045-3064 PPOLG_EC11G GENOME POLYPROTEIN ECHOVIRUS 11 (STRAIN GREGORY 664-690 774-799 PPOLG_EMCV GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 225-247 558-578 1194-1215 1650-1667 PPOLG_EMCVB GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 560-580 1120-1141 1196-1217 (STRAIN EMC-B NONDIABETOGENI PPOLG_EMCVD GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 560-580 1120-1141 1196-1217 (STRAIN EMC-D DIABETOGENIC) PPOLG_ENMG3 GENOME POLYPROTEIN MENGO ENCEPHALOMYOCAR- 560-580 DITIS VIRUS (STRAIN 37A) PPOLG_ENMGO GENOME POLYPROTEIN MENGO ENCEPHALOMYOCAR- 493-513 DITIS VIRUS PPOLG_FMDV1 GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE 121-141 984-1003 1036-1057 1396-1411 1465-1487 1764-1791 VIRUS (STRAIN A10-61) PPOLG_FMDVS GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE 162-187 VIRUS (STRAIN A5) PPOLG_FMDVA GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE 121-140 984-1003 1036-1057 1396-1411 1465-1487 1763-1790 VIRUS (STRAIN A12) PPOLG_FMDVO GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE 121-141 984-1003 1036-1057 1396-1411 1465-1487 1763-1790 VIRUS (STRAINS OIL AND OIBFS)( PPOLG_FMDV5 GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE 301-320 VIRUS (STRAIN C1-SANTA PAU [C-S8]) PPOLG_FMDVT GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE 121-141 979-998 VIRUS (STRAIN C1) PPOLG_HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1) 112-133 143-169 619-640 683-699 833-857 2327-2347 2442-2457 2837-2859 PPOLG_HCVA GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN 102-128 1143-1163 1282-1301 1778-1802 2370-2397 2518-2538 3131-3152 3737-3753 3767-3782 ALFORT) 3877-3893 PPOLG_HCVB GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN 102-128 1143-1163 1282-1301 1778-1802 2370-2397 2518-2538 3131-3152 3737-3753 3767-3782 BRESCIA) 3877-3893 PPOLG_HCVBK GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 619-640 683-699 2327-2347 2441-2456 2836-2858 2988-3007 (ISOLATE BK) PPOLG_HCVE1 GENOME POLYPROTEIN HEPATITIS C VIRUS 27-53 (ISOLATE EC1) PPOLG_HCVH GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 619-640 683-699 833-853 863-880 2442-2457 2837-2859 (ISOLATE H) PPOLG_HCVH4 GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 (ISOLATE HCV-476) PPOLG_HCVH7 GENOME POLYPROTEIN HEPATITIS C VIRUS 15-41 (ISOLATE HCT27) PPOLG_HCVH8 GENOME POLYPROTEIN HEPATITIS C VIRUS 27-53 (ISOLATE HCT18) PPOLG_HCVHK GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 (ISOLATE HCV-KF) PPOLG_HCVJ2 GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 (ISOLATE HC-J2) PPOLG_HCVJ5 GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 623-644 687-703 (ISOLATE HC-J5) PPOLG_JCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 623-644 687-703 837-861 1827-1853 2327-2347 2859-2881 3011-3030 (ISOLATE HC-J6) PPOLG_HCVJ7 GENOME POLYPROTEIN HEPATITIS C VIRUS 143-169 623-644 687-703 (ISOLATE HC-J7) PPOLG_HCVJ8 GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 837-861 867-884 1172-1188 1827-1853 2859-2881 3011-3030 (ISOLATE HC-J8) PPOLG_HCVJA GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 619-640 683-699 833-857 863-880 2327-2347 2836-2858 2988-3007 (ISOLATE JAPANESE) PPOLG_HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 619-640 683-699 833-857 2327-2347 2441-2456 2836-2858 (ISOLATE HC-JT) PPOLG_HCVTH GENOME POLYPROTEIN HEPATITIS C VIRUS 27-53 (ISOLATE TH) PPOLG_HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 619-640 683-699 833-857 2327-2347 2441-2456 2836-2858 2988-3007 (ISOLATE TAIWAN) PPOLG_HPAV1 GENOME POLYPROTEIN HEPATITIS A VIRUS 303-323 (STRAIN LCDC-1) PPOLG_HPAV2 GENOME POLYPROTEIN HEPATITIS A VIRUS 401-428 799-819 1195-1708 1687-1708 2008-2033 2068-2092 (STRAIN 24A) PPOLG_HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS 799-819 1195-1210 1687-1708 2008-2033 2068-2092 (STRAIN 43C PPOLG_HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS 799-819 1195-1210 1687-1708 2008-2033 2068-2092 (STRAIN 18F) PPOLG_HPAVC GENOME POLYPROTEIN HEPATITIS A VIRUS 799-819 (STRAIN CR326) PPOLG_HPAVG GENOME POLYPROTEIN HEPATITIS A VIRUS 778-798 (STRAIN GA76) PPOLG_HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS 799-819 1195-1210 1688-1709 2009-2034 2069-2093 (STRAIN HM-175) PPOLG_HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS 799-819 1195-1210 1688-1709 2009-2034 2069-2093 (STRAIN LA) PPOLG_HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS 799-819 1195-1210 1688-1709 2009-2034 2069-2093 (STRAIN MBB) PPOLG_HPAVS GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS 1199-1214 1690-1711 2012-2037 2072-2096 (STRAIN AGM-27) PPOLG_HRV14 GENOME POLYPROTEIN HUMAN RHINOVIRUS 14 (HRV-14 1383-1406 1962-1982 PPOLG_HRV1A GENOME POLYPROTEIN HUMAN RHINOVIRUS 1A (HRV-1A) 361-379 547-562 PPOLG_HRV1B GENOME POLYPROTEIN HUMAN RHINOVIRUS 1B (HRV-1B) 386-404 572-587 859-876 1029-1052 1453-1478 1625-1641 1816-1842 1941-1961 PPOLG_HRV2 GENOME POLYPROTEIN HUMAN RHINOVIRUS 2 (HRV-2) 569-584 694-713 1022-1045 1446-1469 1618-1634 1809-1835 1843-1866 PPOLG_HRV89 GENOME POLYPROTEIN HUMAN RHINOVIRUS 89 (HRV-89) 576-591 1038-1061 1229-1253 1332-1358 1460-1485 1632-1648 1823-1849 1948-1968 PPOLG_HUBV7 GENOME POLYPROTEIN HUMAN RHINOVIRUS 70 1492-1515 (STRAIN J670/71) PPOLG_1BDVO STRUCTURAL POLYPROTEIN AVAIN INFECTIOUS BURSAL 905-922 DISEASE VIRUS (STRAIN OH) PPOLG_JAEV1 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 938-963 1306-1325 1642-1658 2245-2270 2326-2351 2462-2481 (STRAIN SA-14) PPOLG_JAEV5 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 938-963 1306-1325 1642-1658 2245-2270 2326-2351 2462-2481 (STRAIN SA(V)) PPOLG_JAEVJ GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 938-963 1306-1325 1642-1658 2245-2270 2326-2351 2462-2481 (STRAIN JAORAS982) PPOLG_JAEVN GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 866-891 1234-1253 (STRAIN NAKAYAMA) PPOLG_KUNJM GENOME POLYPROTEIN KUNJIN VIRUS (STRAIN MRM61C) 561-576 935-960 1307-1326 1643-1659 2246-2271 2327-2352 2440-2460 2463-2483 2641-2658 2798-2814 PPOLG_LANVT GENOME POLYPROTEIN LANGAT VIRUS (STRAIN TP21) 67-89 527-551 736-756 835-862 1157-1178 1519-1544 1630-1653 2158-2182 2230-2257 2366-2387 2424-2451 2766-2784 PPOLG_LANVY GENOME POLYPROTEIN LANGAT VIRUS (STRAIN 67-89 527-551 YELANTSEV) PPOLG_LIV GENOME POLYPROTEIN LOUPING ILL VIRUS (LI) 67-89 527-551 835-862 PPOLG_LIVSB GENOME POLYPROTEIN LOUPING ILL VIRUS (STRAIN 247-271 SB 526) PPOLG_MCFA GENOME POLYPROTEIN MOSQUITO CELL FUSING AGENT 120-137 1174-1199 1402-1428 1788-1805 1872-1887 2012-2029 2810-2827 (CFA FLAVIVIRUS) PPOLG_MDMV GENOME POLYPROTEIN MAIZE DWARF MOSAIC VIRUS 39-56 PPOLG_MVEV GENOME POLYPROTEIN MURRAY VALLEY ENCEPHALITIS 331-347 563-578 937-962 1305-1324 1523-1548 1585-1602 1641-1657 VIRUS PPOLG_OMV GENOME POLYPROTEIN ORNITHOGLAUM MOSAIC VIRUS 90-110 111-696 678-696 898-914 PPOLG_PEMVC GENOME POLYPROTEIN PEPPER MOTTLE VIRUS 690-717 826-846 1009-1034 1301-1348 1455-1482 1484-1500 1676-1697 1921-1945 2002-2022 (CALIFORNIA ISOLATE) PPOLG_POLIM GENOME POLYPROTEIN POLIOVIRUS TYPE 1 1409-1432 (STRAIN MAHONEY) PPOLG_POLIS GENOME POLYPROTEIN POLIOVIRUS TYPE I 1410-1433 (STRAIN SABIN) PPOLG_POL2L GENOME POLYPROTEIN POLIOVIRUS TYPE 2 1408-1431 (STRAIN LANSING) PPOLG_POL2W GENOME POLYPROTEIN POLIOVIRUS TYPE 2 1408-1431 (STRAIN W-2) PPOLG_POL32 GENOME POLYPROTEIN POLIOVIRUS TYPE 3 577-594 1407-1430 (STRAIN 23127) PPOLG_POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3 577-594 1407-1430 (STRAINS P3/LEON/37 AND P3/LEON 12A[1]B) PPOLG_PPVD GENOME POLYPROTEIN PLUM POX POTYVIRUS 153-178 551-571 714-741 1098-1115 1468-1495 1497-1513 2606-2624 3084-3106 (STRAIN D) PPOLG_PPVEA GENOME POLYPROTEIN PLUM POX POTYVIRUS 981-999 1461-1483 (STRAIN ELAMAR) PPOLG_PPVNA GENOME POLYPROTEIN PLUM POX POTYVIRUS 153-178 713-740 1097-1114 1467-1494 1496-1512 2605-2623 3068-3090 (ISOLATE NAT) PPOLG_PPVRA GENOME POLYPROTEIN PLUM POX POTY VIRUS 153-178 713-740 1097-1114 1467-1494 1496-1512 2605-2623 3083-3105 (STRAIN RANKOVIC) PPOLG_PRSVH GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 272-290 (STRAIN P/MUTANT HA) PPOLG_PRSVP GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 163-181 (STRAIN P/MUTANT HA-5-1) PPOLG_PRSVW GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 163-181 (STRAIN W) PPOLG_PSBMV GENOME POLYPROTEIN PEA SEED-BORNE MOSAIC VIRUS 47-62 251-268 339-357 654-674 981-1001 1411-1428 1565-1592 2708-2726 (STRAIN DPD1) PPOLG_PVYC GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN C) 755-776 PPOLG_PVYHU GENOME POLYPROTEIN POTATO VIRUS Y 755-776 964-982 1010-1036 1109-1125 1456-1483 1485-1501 1677-1698 1922-1946 2588-2606 (STRAIN HUNGARIAN) 3004-3026 PPOLG_PVYN GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN N) 755-776 964-982 1010-1036 1109-1125 1456-1483 1485-1501 1677-1698 1922-1946 2590-2608 PPOLG_PVYO GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN O) 755-776 PPOLG_PYFV1 GENOME POLYPROTEIN PARSNIP YELLOW FLECK VIRUS 592-616 1326-1353 1626-1651 1903-1924 2621-2642 2702-2729 2766-2783 (ISOLATE P-121) PPOLG_STEVM GENOME POLYPROTEIN ST LOUIS ENCEPHALITIS VIRUS 1301-1324 (STRAIN MS1-7) PPOLG_SUMVS GENOME POLYPROTEIN SUGARCANE MOSAIC VIRUS 39-56 (STRAIN SC) PPOLG_SVDVH GENOME POLYPROTEIN SWINE VESICULAR DISEASE 1475-1501 1585-1610 VIRUS (STRAIN H/3 '76) PPOLG_SVDVU GENOME POLYPROTEIN SWINE VESICULAR DISEASE 1475-1501 1585-1610 VIRUS (STRAIN UKG/27/72) PPOLG_TBEVS GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS 67-89 527-551 1363-1378 1519-1544 1630-1653 1740-1761 2230-2257 2366-2387 2765-2783 VIRUS (STRAIN SOFJIN) PPOLG_TBEVW GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS 67-89 527-551 835-862 1519-1544 1630-1653 2230-2257 2366-2387 2766-2784 (VIRSU (WESTERN SUBTYPE) PPLLG_TEV GENOME POLYPROTEIN TOBACCO ETCH VIRUS (TEV 827-853 953-980 1016-1042 1114-1130 1307-1324 1490-1506 PPOLG_TMEVB GENOME POLYPROTEIN THEILER'S MURINE 924-941 1074-1095 1119-1140 1520-1546 1658-1677 ENCEPHALOMYELITIS VIRUS (STRAIN BEAN 8386) PPOLG_TMEVD GENOME POLYPROTEIN THEILER'S MURINE 1072-1093 1117-1138 1518-1544 1656-1675 ENCEPHALOMYELITIS VIRUS (STRAIN DA) PPOLG_TMEVG GENOME POLYPROTEIN THEILER'S MURINE 645-670 924-941 1074-1095 1119-1140 1520-1546 1658-1677 ENCEPHALOMYELITIS VIRUS (STRAIN GDV11) PPOLG_TUMV GENOME POLYPROTEIN TURNIP MOSAIC VIRUS 23-39 970-991 1138-1156 1573-1595 PPOLG_TVMV GENOME POLYPROTEIN TOBACCO VEIN MOTTLING VIRUS 404-428 497-517 660-687 850-866 967-992 1257-1274 2537-2562 PPOLG_WMV2 GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II 198-218 PPOLG_WNV GENOME POLYPROTEIN WEST NILE VIRUS 557-572 931-956 1303-1322 1639-1655 2240-2267 2324-2349 2437-2457 2638-2655 2795-2811 PPOLG_YEFV1 GENOME POLYPROTEIN YELLOW FEVER VIRUS 74-95 1157-1179 1228-1248 1385-1405 1495-1511 1625-1641 1761-1778 2229-2254 (STRAIN 17D) PPOLG_YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS 74-95 1157-1179 1228-1248 1385-1405 1495-1511 1625-1641 1761-1778 2229-2254 (STRAIN PASTEUR 17D-204) PPOLG_YEFV8 GENOME POLYPROTEIN YELLOW FEVER VIRUS 74-95 (STRAIN 1899/81) PPOLH_POLIM GENOME POLYPROTEIN POLIOVIRUS TYPE 1 1410-1433 (STRAIN MAHONEY) PPOLN_EEVVT NONSTRUCTURAL VENEZUELAN EQUINE 90-107 235-254 613-634 1001-1018 1153-1178 1923-1939 2129-2144 2201-2221 POLYPROTEIN ENCEPHALITIS VIRUS (STRAIN TRINIDAD DON PPOLN_FCVC6 NON-STRUCTURAL FELINE CACICIVIRUS (STRAIN 443-469 748-766 902-923 1069-1088 POLYPROTEIN CF1/68 FIV) PPOLN_FCVF4 NON-STRUCTURAL FELINE CACICIVIRUS (STRAIN 300-326 POLYPROTEIN JAPANESE F4) PPOLN_FCVF9 NON-STRUCTURAL FELINE CACICIVIRUS (STRAIN F9) 171-186 262-283 919-945 1224-1242 1378-1399 1545-1564 POLYPROTEIN PPOLN_HEVBU NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN 250-266 1274-1291 POLYPROTEIN BURMA) PPOLN_HEVME NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN 250-266 1272-1289 POLYPROTEIN MEXICO) PPOLN_HEVMY NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN 250-266 1274-1291 POLYPROTEIN MYANMAR) PPOLN_HEVPA NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN 249-265 1273-1290 POLYPROTEIN PAKISTAN) PPOLN_MIDDV NONSTRUCTURAL MIDDLEBURG VIRUS 488-512 628-643 700-720 POLYPROTEIN PPOLN_ONNVG NONSTRUCTURAL ONYONG-NYONG VIRUS 90-107 613-634 2148-2163 2220-2240 POLYPROTEIN (STRAIN GULU) PPOLN_RHDV NON-STRUCTURAL RABBIT HEMORRHAGIC DISEASE 156-180 270-292 299-320 479-502 1330-1353 1429-1455 1471-1490 POLYPROTEIN VIRUS PPOLN_RHDV3 NON-STRUCTURAL RABBIT HEMORRHAGIC DISEASE 115-135 POLYPROTEIN VIRUS (STRAIN V-351) PPOLN_RRVN NONSTRUCTURAL ROSS RIVER VIRUS 89-106 611-632 2113-2128 2185-2205 POLYPROTEIN (STRAIN NB5092) PPOLN_RRVT NONSTRUCTURAL ROSS RIVER VIRUS 782-797 854-874 POLYPROTEIN (STRAIN T48) PPOLN_RUBVT NONSTRUCTURAL RUBELLA VIRUS (STRAIN 14-37 97-113 263-279 670-694 901-918 1374-1393 2035-2052 POLYPROTEIN THERIEN) PPOLN_SFV NONSTRUCTURAL SEMLIKI FOREST VIRUS 91-108 617-643 2062-2077 2134-2154 POLYPROTEIN PPOLN_SINDO NONSTRUCTURAL SINDBIS VIRUS (SUBTYPE 620-646 1123-1150 1790-1814 2148-3163 2220-2240 POLYPROTEIN OCKELBO/STRAIN EDSBYN 82-5) PPOLN_SINDV NONSTRUCTURAL SINDBIS VIRUS (STRAIN HRSP) 620-646 1123-1150 1744-1763 1790-1812 2146-2161 2218-2238 POLYPROTEIN PPOLR_EPMV RNA REPLICASE EGGPLANT MOSAIC VIRUS 8908-833 POLYPROTEIN PPOLR_OYMV RNA REPLICASE ONONIS YELLOW MOSAIC VIRUS 707-727 941-962 POLYPROTEIN PPOLR_TYMV RNA REPLICASE TURNIP YELLOW MOSAIC VIRUS 212-233 436-453 1173-1192 POLYPROTEIN PPOLR_TYMVA RNA REPLICASE TURNIP YELLOW MOSAIC VIRUS 212-233 436-453 1173-1192 POLYPROTEIN (AUSTRAILIA ISOLATE) PPOLR_TYMVC RNA REPLICASE YURNIP YELLOW MOSAIC VIRUS 212-233 436-453 1173-1192 POLYPROTEIN (ISOLATE TYMC) PPOLS_EEEV STRUCTURAL POLYPROTEIN EASTER EQUINE ENCEPHALITIS 35-50 213-229 491-507 VIRUS PPOLS_EEEV3 STRUCTURAL POLYPROTEIN EASTER EQUINE ENCEPHALITIS 35-50 214-230 492-508 VIRUS PPOLS_EEVV8 STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE 32-48 229-245 504-522 ENCEPHALITIS VIRUS (STRAIN TC-83) PPOLS_EEVVT STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE 32-48 229-245 504-522 ENCEPHALITIS VIRUS (STRAIN TRINIDAD DON PPOLS_IBVD5 STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL 900-922 DISEASE VIRUS (STRAIN 52/70) PPOLS_IBDVA STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL 900-922 DISEASE VIRUS (STRAIN AUSTRALIAN 00 PPOLS_IBDVC STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL 900-922 DISEASE VIRUS (STRAIN CU-1) PPOLS_IBDVP STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL 881-903 DISEASE VIRUS (STRAIN PBG-98) PPOLS_IBDVS STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL 900-922 DISEASE VIRUS (STRAIN STC) PPOLS_ONNVG STRUCTURAL POLYPROTEIN O'NYONG-NYONG VIRUS 688-708 (STRAIN GULU) PPOLS_RRVT STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48) 1216-1243 PPOLS_RUBVH STRUCTURAL POLYPROTEIN RUBELLA VIRUS (VACCINE 281-302 STRAIN HPV77) PPOLS_RUBVM STRUCTURAL POLYPROTEIN RUBELLA VIRUS (STRAIN M33) 280-301 PPOLS_RUBVR STRUCTURAL POLYPROTEIN RUBELLA VIRUS (VACCINE 281-302 STRAIN RA27/3 PPOLS_RUBVT STRUCTURAL POLYPROTEIN RUBELLA VIRUS (STRAIN 281-302 1041-1060 THERIEN PPOLS_SFV STRUCTURAL POLYPROTEIN SEMLIKI FOREST VIRUS 35-59 751-772 780-801 PPOLS_SINDO STRUCTURAL POLYPROTEIN SINDBIS VIRUS (SUBTYPE 33-52 OCKELBO/STRAIN EDSBYN 82-5) PPOLS_SINDV STRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAIN 33-52 HRSP AND HRLP) PPOLS_WEEV STRUCTURAL POLYPROTEIN WESTERN EQUINE 36-51 909-933 ENCEPHALITIS VIRUS PPOL_AVIRE POL POLYPROTEIN AVIAN RETICULOENDOTHELIOSIS 283-303 VIRUS PPOL_BAEVM POL POLYPROTEIN BABOON ENDOGENOUS VIRUS 526-544 973-993 999-1019 1070-1091 (STRAIN M7) PPOL_BIV06 POL POLYPROTEIN BOVINE IMMUNODEFICIENCY 101-119 742-768 868-889 VIRUS (ISOLATE 106) PPOL_BIV27 POL POLYPROTEIN BOVINE IMMUNODEFICIENCY 101-119 742-768 868-889 VIRUS (ISOLATE 127) PPOL_BLVAU POL POLYPROTEIN BOVINE LEUKEMIA VIRUS 487-504 (AUSTRALIAN ISOLATE) PPOL_BLVJ POL POLYPROTEIN BOVINE LEUKEMIA VIRUS 487-504 (REVERSE TRANSCRIPTASE (JAPANESE ISOLATE BVL-1) PPOL_CAEVC POL POLYPROTEIN CAPRINE ARTHRITIS 393-419 656-671 ENCEPHALITIS VIRUS (STRAIN CORK) PPOL_CAMVC ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS 184-204 380-407 471-494 (STRAIN CM-1841) PPOL_CAMVD ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS 175-199 375-402 466-489 (STRAIN D/H) PPOL_CAMVE ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS 184-204 380-407 471-494 (STRAIN BBC) PPOL_CAMVN ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS 70-97 185-205 381-408 472-495 (STRAIN NY8153) PPOL_CAMVS ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS 184-204 380-407 471-494 (STRAIN STRASBOURG) PPOL_CERV ENZYMATIC POLYPROTEIN CARNATION ETCHED RING VIRUS 161-186 455-478 PPOL_COYMV PUTATIVE POLYPROTEIN COMMELINE YELLOW MOTTLE 320-343 1286-1311 1606-1622 1641-1665 VIRUS PPOL_EIAV9 POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA 437-456 VIRUC (CLONE 1369) PPOL_EIAVC POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA 437-456 VIRUS (CLONE CL22) PPOL_EIAVY POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA 436-455 VIRUS (ISOLATE WYOMING) PPOL_FENV1 POL POLYPROTEIN FELINE EDNOGENOUS VIRUS 383-401 856-876 ECE1 PPOL_FIVPE POL POLYPROTEIN FELINE IMMUNODEFICIENCY 407-426 755-775 VIRUS (ISOLATE PETALUMA) PPOL_FIVSD POL POLYPROTEIN FELINE IMMUNODEFICIENCY 407-426 755-775 VIRUS (ISOLATE SAN DIEGO) PPOL_FIVT2 POL POLYPROTEIN FELINE IMMUNODEFICIENCY 406-425 665-690 755-775 1041-1060 VIRUS (ISOLATE TM2) PPOL_FMVD ENZYMATIC POLYPROTEIN FIGWORT MOSAIC VIRUS 191-212 464-487 (STRAIN DXS) PPOL_FOAMV POL POLYPROTEIN HUMAN SPUMARETROVIRUS 126-147 768-788 PPOL_GALV POL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 59-80 971-991 1048-1071 PPOL_HTLIA POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 330-346 TYPE I (STRAIN ATK) PPOL_HTLIC POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 330-346 TYPE I (CARIBBEAN ISOLATE) PPOL_TTLV2 POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 609-627 TYPE II PPOL_HV1A2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 860-887 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PPOL_HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 635-660 872-899 VIRUS TYPE 1 (BH10 ISOLATE) PPOL_HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 872-899 VIRUS TYPE 1 (BH5 ISOLATE) PPOL_HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 872-899 VIRUS TYPE 1 (BRU ISOLATE) PPOL_HE1EL POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 622-647 859-886 VIRUS TYPE 1 (ELI ISOLATE) PPOL_HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 860-887 VIRUS TYPE 1 (HXB2 ISOLATE) PPOL_HV1JR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 864-891 VIRUS TYPE 1 (JRCSF ISOLATE) PPOL_HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 859-886 VIRUS TYPE 1 (MAL ISOLATE) PPOL_HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 863-890 VIRUS TYPE 1 (MN ISOLATE) PPOL_HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 623-648 860-887 VIRUS TYPE 1 (NEW YORK-5 ISOLATE) PPOL_HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 622-647 859-886 VIRUS TYPE 1 (NDK ISOLATE) PPOL_HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 860_887 VIRUS TYPE 1 (OY1 ISOLATE) PPOL_HVIPV POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 635-660 872-899 VIRUS TYPE 1 (PV22 ISOLATE) PPOL_HV1RH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 859-886 VIRUS TYPE 1 (RF/HAT ISOLATE) PPOL_HV1U4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 859-886 VIRUS TYPE 1 (STRAIN UGANDAN/ISO PPOL_HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 622-647 859-886 VIRUS TYPE 1 (Z2/CDC-Z34 ISOLATE) PPOL_HV1Z6 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 5-32 VIRUS TYPE 1 (ZAIRE 6 ISOLATE) PPOL_HV2BE POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 379-406 907-934 VIRUS TYPE 2 (ISOLATE BEN) PPOL_HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 886-913 VIRUS TYPE 2 (ISOLATE CAM2) PPOL_HV2D1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 397-424 925-952 VIRUS TYPE 2 (ISOLATE D194) PPOL_HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 907-934 VIRUS TYPE 2 (ISOLATE D205.7) PPOL_HV2G1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 359-386 887-914 VIRUS TYPE 2 (ISOLATE GHANA-1) PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 543-564 771-792 887-914 VIRUS TYPE 2 (ISOLATE NIH-Z) PPOL_HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 888-915 VIRUS TYPE 2 (ISOLATE ROD) PPOL_HV2SB POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 359-386 887-907 VIRUS TYPE 2 (ISOLATE SBLISY) PPOL_HV2ST POL POLYPROTEIN HUMAN IMMUNOCEFICIENCY 379-406 907-934 VIRUS TYPE 2 (ISOLATE ST) PPOL_IPHA PUTATIVE POL POLYPROTEIN HAMSTER INTRACISTERNAL 166-190 198-225 460-477 A-PARTICLE PPOL_IPMA PUTATIVE POL POLYPROTEIN MOUSE INTRACISTERNAL 183-201 209-236 506-523 531-552 769-789 A-PARTICLE PPOL_IPMAI PROBABLE POL POLYPROTEIN MOUSE INTRACISTERNAL 102-120 128-155 407-423 425-442 A-PARTICLE PPOL_JSRV POL POLYPROTEIN SHEEP PULMONARY ADENO- 186-213 507-526 660-679 MATOSIS VIRUS (JAAGSIEKTE SHEEP RET PPOL_MCFF3 POL POLYPROTEIN MINK CELL FOCUS-FORMING 37-53 MURINE LEUKEMIA VIRUS (ISOLATE CI- PPOL_MLVAK POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS 651-671 728-744 PPOL_MLVAV POL POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 335-354 978-998 1004-1024 1081-1097 PPOL_MLVCB POL POLYPROTEIN CAS-BR-E MURINE LEUKEMIA VIRUS 64-84 90-110 167-183 PPOL_MLVF5 POL POLYPROTEIN FRIEND MURINE LEUKEMIA 340-359 983-1003 1009-1029 1086-1102 VIRUS (ISOLATE 57) PPOL_MLVFF POL POLYPROTEIN FRIEND MURINE LEUKEMIA 340-359 983-1003 1009-1029 1086-1102 VIRUS (ISOLATE FB29) PPOL_MLVFP POL POLYPROTEIN FRIEND MURINE LEUKEMIA 340-359 983-1003 1009-1029 1086-1102 (ISOLATE PVC-211) PPOL_MLVMO POL POLYPROTEIN MOLONEY MURINE 335-354 978-998 LEUKEMIA VIRUS PPOL_MLVRD POL POLYPROTEIN RADIATION MURINE 335-354 978-998 1004-1024 1081-1097 LEUKEMIA VIRUS PPOL_MLVRK POL POLYPROTEIN RADIATION MURINE 363-383 389-409 466-482 LEUKEMIA VIRUS (STRAIN KAPLAN) PPOL_MMTVB POL POLYPROTEIN MOUSE MAMMARY TUMOR 196-219 731-751 VIRUS (STRAIN BR6) PPOL_MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 743-763 PPOL_OMVVS POL POLYPROTEIN OVINE LENTIVIRUS 369-395 469-488 632-647 1045-1063 (STRAIN SA-OMVV) PPOL_RSVP POL POLYPROTEIN ROUS SARCOMA VIRUS 719-742 (STRAIN PRAGUE C) PPOL_RTBV POLYPROTEIN RICE TUNGRO BACILLIFORM 891-915 1058-1083 VIRUS (RTBV) PPOL_RTBVP POLYPROTEIN RICE TUNGRO BACILLIFORM 891-915 1058-1083 VIRUS (ISOLATE PHILIPPINES) PPOL_SFV1 POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 188-204 335-356 845-869 976-996 PPOL_SFV3L POL POLYPROTEIN SIMIAN FOAMY VIRUS 186-206 337-358 847-871 978-998 (TYPE 3/STRAIN LK3) PPOL_SIVA1 POL POLYPROTEIN SIMAIN IMMUNODEFICIENCY 895-915 VIRUS (AGM155 ISOLATE) PPOL_SIVAG POL POLYPROTEIN SIMAIN IMMUNODEFICIENCY 711-726 900-920 VIRUS (AGM3 ISOLATE) PPOL_SIVA1 POL POLYPROTEIN SIMAIN IMMUNODEFICIENCY 899-926 VIRUS (ISOLATE AGM/CLONE GR1-1) PPOL_SIVAT POL POLYPROTEIN SIMAIN IMMUNODEFICIENCY 726-741 915-935 VIRUS (TYO-1 ISOLATE) PPOL_SIVCZ POL POLYPROTEIN CHIMPANZEE 884-911 IMMUNODEFICIENCY VIRUS PPOL_SIVGB POL POLYPROTEIN SIMAIN IMMUNODEFICIENCY 680-695 869-896 VIRUS (ISOLATE GB1) PPOL_SIVM1 POL POLYPROTEIN SIMAIN IMMUNODEFICIENCY 380-407 908-935 VIRUS (MM142-83 ISOLATE) PPOL_SIVMK POL POLYPROTEIN SIMAIN IMMUNODEFICIENCY 380-407 712-737 906-933 VIRUS (K6W ISOLATE) PPOL_SIVS4 POL POLYPROTEIN SIMAIN IMMUNODEFICIENCY 343-370 871-898 VIRUS (F235/SMH4 ISLOATE) PPOL_SIVSP POL POLYPROTEIN SIMAIN IMMUNODEFICIENCY 346-373 874-901 VIRUS (PBJ/BC13 ISOLATE) PPOL_SMRVH POL POLYPROTEIN SQUIRREL MONKEY RETROVIRUS 748-768 PPOL_SMSAV POL POLYPROTEIN SIMIAN SARCOMA VIRUS 100-120 177-200 PPOL_SOCMV ENZYMATIC POLYPROTEIN SOYBEAN CHLOROTIC MOTTLE 131-155 VIRUS PPOL_SRV1 POL POLYPROTEIN SIMIAN RETROVIRUS 743-763 PPOL_VILV POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514) 488-507 651-666 971-991 PPOL_VILV1 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/ 488-507 651-666 971-991 CLONE LV1-1KS1) PPOL_VILV2 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/ 488-507 651-666 971-991 CLONE LV1-1KS2) PPP15_HCMVA LARGE STRUCTURAL HUMAN CYTOMEGALOVIRUS 153-171 183-210 PHOSPHOPROTEIN PP150 (STRAIN AD169) PPP28_HCMVA 28 KD STRUCTURAL HUMAN CYTOMEGALOVIRUS 116-141 PHOSPHOPROTEIN (STRAIN AD169) PPP41_HSV6G PHOSPHOPROTEIN P41 HERPES SIMPLEX VIRUS 158-175 396-411 (TYPE 6/STRAIN GS) PPP65_HCMVA 65 KD LOWER MATRIX HUMAN CYTOMEGALOVIRUS 311-333 PHOSPHOPROTEIN (STRAIN AD169) PPP65_HCMVT 64 KD LOWER MATRIX HUMAN CYTOMEGALOVIRUS 301-323 PHOSPHOPROTEIN (STRAIN TOWNE) PPP71_HCMVA 71 KD UPPER MATRIX HUMAN CYTOMEGALOVIRUS 79-102 PHOSPHOPROTEIN (STRAIN AD169) PPR73_MMTVB PROTEIN PR73 MOUSE MAMMARY TUMOR 40-61 VIRUS (STRAIN BR6) PPR73_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR 40-61 VIRUS (STRAIN GR) PPR7L_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR 44-65 VIRUS (STRAIN GR) PPR7R_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR 40-61 VIRUS (STRAIN GR) PRASH_MSVHA TRANSFORMING PROTEINS HARVEY MURINE SARCOMA 49-73 P21 AND P29 VIRUS PRASH_RRASV TRANSFORMING PROTEINS RASHEED RAT SARCOMA VIRUS 56-80 P21 AND P29 PREEP_CSV REPEAT ELEMENT PROTEIN CAMPOLETIC SONORENSIS VIRUS 14-36 PREFR_VACCV RIFAMPICIN RESISTANCE VACCINIA VIRUS (STRAIN WR), 274-298 316-335 517-535 PROTEIN AND (STRAIN COPENHAGEN) PREFR_VARV RIFAMPICIN RESISTANCE VARIOLA VIRUS 274-298 316-335 517-535 PROTEIN PREV_SIVAG REV PROTEIN SIMIAN IMMUNODEFICIENCY 2-17 VIRUS (AGM3 ISOLATE) PREV_SIVGB REV PROTEIN SIMIAN IMMUNODEFICIENCY 45-72 VIRUS (ISOLATE GB1) PRIR1_ASFM2 RIBONUCLEOSIDE- AFRICAN SWINE FEVER VIRUS 139-164 189-210 495-510 DIPHOSPHATE REDUCTASE (ISOLATE MALAWI LIL 20/1) PRIR1_EBV RIBONUCLEOTIDE EPSTEIN-BARR VIRUS 793-812 REDUCTASE (STRAIN B95-8) PRIR1_HCMVA RIBONUCLEOTIDE HUMAN CYTOMEGALOVIRUS 192-212 669-684 REDUCTASE (STRAIN AD169) PRIR1_HSV11 RIBONUCLEOTIDE HERPES SIMPLEX VIRUS 415-430 587-613 REDUCTASE (TYPE 1/STRAIN 17) PRIR1_HSVEB RIBONUCLEOTIDE EQUINE HERPESVIRUS TYPE 1 60-85 266-288 668-694 REDUCTASE (STRAIN AB4P) PRIR1_HSVSA RIBONUCLEOTIDE HERPESVIRUS SAIMIRI 136-151 REDUCTASE (STRAIN 11) PRIR1_VACCC RIBONUCLEOTIDE VACCINIA VIRUS (STRAIN 36-51 REDUCTASE COPENHAGEN) PRIR1_VACCV RIBONUCLEOTIDE VACCINIA VIRUS (STRAIN WR) 36-51 REDUCTASE PRIR1_VARV RIBONUCLEOTIDE VARIOLA VIRUS 36-51 REDUCTASE PRIR1_VZVD RIBONUCLEOTIDE VARICELLA-ZOSTER VIRUS 34-58 221-247 258-280 REDUCTASE (STRAIN DUMAS) PRIR2_EBV RIBONUCLEOTIDE EPSTEIN-BARR VIRUS 209-236 REDUCTASE (STRAIN B95-8) PRIR2_HSV11 RIBONUCLEOTIDE HERPES SIMPLEX VIRUS 44-66 275-292 REDUCTASE (TYPE 1/STRAIN 17) PRIR2_HSVIK RIBONUCLEOTIDE HERPES SIMPLEX VIRUS 43-65 245-261 274-291 REDUCTASE (TYPE 1/STRAIN KOS) PRIR2_HSV23 RIBONUCLEOTIDE HERPES SIMPLEX VIRUS 41-63 272-289 REDUCTASE (TYPE 2/STRAIN 333) PRIR2_HSVB3 RIBONUCLEOTIDE BOVINE HERPESVIRUS TYPE 1 244-266 REDUCTASE (STRAIN 34) PRIR2_HSVEB RIBONUCLEOTIDE EQUINE HERPESVIRUS TYPE 1 61-88 251-273 REDUCTASE (STRAIN AB4P) PRIR2_HSVSA RIBONUCLEOTIDE HERPESVIRUS SAIMIRI (STRAIN 11) 212-239 REDUCTASE PRIR2_SFVKA RIBONUCLEOTIDE SHOPE FIBROMA VIRUS 184-206 215-237 REDUCTASE (STRAIN KASZA) PRIR2_VACCC RIBONUCLEOTIDE VACCINIA VIRUS (STRAIN 184-206 REDUCTASE COPENHAGEN) PRIR2_VACCP RIBONUCLEOTIDE VACCINIA VIRUS (STRAIN L-IVP 184-206 REDUCTASE PRIR2_VACCV RIBONUCLEOTIDE VACCINIA VIRUS (STRAIN WR) 184-206 REDUCTASE PRIR2_VARV RIBONUCLEOTIDE VARIOLA VIRUS 184-206 215-237 REDUCTASE PRIR2_VZVD RIBONUCLEOTIDE VARICELLA-ZOSTER VIRUS 237-258 REDUCTASE (STRAIN DUMAS) PRMIL_AVEVR RMIL SER/THR-PROTEIN AVIAN ROUS-ASSOCIATED VIRUS 380-405 TRANSFORMING P TYPE 1 PRP94_VACCV RNA-POL-ASSOCIATED VACCINIA VIRUS (STRAIN WR), 173-189 265-290 371-394 561-578 TRANSCRIPTION AND (STRAIN COPENHAGEN) SPEC FACT PRP94_VARV RNA-POL-ASSOCIATED VARIOLA VIRUS 173-189 265-290 371-394 561-578 TRANSCRIPTION SPEC FACT PRPO1_VACCC DNA-DIRECTED RNA POL 147 VACCINIA VIRUS (STRAIN 76-96 304-329 848-871 1005-1032 KD POLYPEPTIDE COPENHAGEN) PRPO1_VACCV DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR) 76-96 304-329 848-871 POLYMERASE 147 KD POLYPE PRPO1_VARV DNA-DIRECTED RNA VARIOLA VIRUS 76-96 304-329 848-871 1005-1032 POLYMERASE 147 KD POLYPE PRPO2_CAPVK DNA-DIRECTED RNA CAPRIPOXVIRUS (STRAIN KS-1) 12-29 477-498 POLYMERASE 132 KD POLYPE PRPO2_COWPX DNA-DIRECTED RNA COWPOX VIRUS 150-170 258-274 480-505 POLYMERASE 132 KD POLYPE PRPO2_VACCV DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR), 150-170 258-274 480-505 POLYMERASE 132 KD AND (STRAIN COPENHAGEN) POLYPE PRPO2_VARV DNA-DIRECTED RNA VARIOLA VIRUS 150-170 258-274 480-505 POLYMERASE 132 KD POLYPE PRPO4_VACCC DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN 33-48 POLYMERASE 35 KD COPENHAGEN) POLYPEP PRPO4_VACCV DNA-DIRECTED RNA VACCINAI VIRUS (STRAIN WR) 33-48 POLYMERASE 35 KD POLYPEP PRPO4_VARV DNA-DIRECTED RNA VARIOLA VIRUS 33-55 POLYMERASE 35 KD POLYPEP PRPO6_VACCV DNA-DIRECTED RNA VACCINAI VIRUS (STRAIN WR), 38-59 POLYMERASE 19 KD AND (STRAIN COPENHAGEN) POLYPEP PRPO7_VACCV DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR), 38-59 POLYMERASE 19 KD AND (STRAIN COPENHAGEN) POLYPEP PRPO7_VARV DNA-DIRECTED RNA VARIOLA VIRUS 38-59 POLYMERASE 19 KD POLYPEP PRPO8_FOWP1 DNA-DIRECTED RNA FOWLPOX VIRUS (STRAIN FP-1) 57-81 POLYMERASE 18 KD POLYPEP PRPOA_LELV RNA-DIRECTED RNA LELYSTAD VIRUS 175-197 707-729 1164-1180 1233-1258 1513-1530 1534-1546 1955-1977 2320-2343 2802-2823 POLYMERASE 3133-3156 PRPOL_EAV RNA-DIRECTED RNA EQUINE ARTERITIS VIRUS 97-118 602-617 754-774 825-851 2530-2553 3041-3068 POLYMERASE PRRP1_DHV11 RNA-DIRECTED RNA DHORI VIRUS (STRAIN 247-264 275-299 337-359 377-394 569-591 POLYMERASE SUBUNIT P1 INDIAN/1313/61) PRRP1_IAANN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/ANN ARBOR/6/60) PRRP1_IABEI RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/BEIJING/11/56) PRRP1_IADUN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/DUNEDIN/4/73) PRRP1_IAGU2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/GULL/MARYLAND/704/77) PRRP1_IAHLO RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/EQUINE/LONDON/1416/73) PRRP1_IAHTE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/EQUINE/TENNESSEE/5/86) PRRP1_IAKIE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/KIEV/59/79) PRRP1_IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/KOREAN/426/68) PRRP1_IALE1 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/LENINGRAD/134/57) PRRP1_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/LENINGRAD/134/17/57) PRRP1_IALE3 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/LENINGRAD/134/47/57) PRRP1_IAMAN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/MALLARD/NEW YORK/6750/78) PRRP1_IAME8 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/MEMPHIS 8/88) PRRP1_IANT6 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/NT/60/68) PRRP1_IAPUE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/PUERTO RICO/8/34) PRRP1_IASIN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/SINGAPORE/1/57) PRRPI_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/TURKEY/MINNESOTA/833/80) PRRP1_IAVI7 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 138-163 244-262 POLYMERASE SUBUNIT P1 A/VICTORIA/3/75) PRRP1_IAWIL RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/WILSON-SMITH/33) PRRP1_IAWIS RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/WISCONSIN/3523/88) PRRP1_IAZH3 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/SWINE/HONG KONG/126/82) PRRP1_IAZON RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/SWINE/ONTARIO/2/81) PRRP1_IAZTF RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/SWINE/TENNESSEE/26/77) PRRP1_INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 205-222 POLYMERASE SUBUNIT P1 B/ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP1_INBAD RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 205-222 POLYMERASE SUBUNIT P1 B/ANN ARBOR/1/66 [WILD-TYPE]) PRRP1_INBLE RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 205-222 POLYMERASE SUBUNIT P1 B/LEE/40) PRRP1_INCJJ RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN 317-341 564-591 POLYMERASE SUBUNIT P1 C/JJ/50) PRRP2_IAANN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/ANN ARBOR/6/60) PRRP2_IADH2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/DUCK/HOKKAIDO/8/80) PRRP2_IAFPR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/FOWL PLAGUE VIRUS/ ROSTOCK/34) PRRP2_IAGU2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/GULL/MARYLAND/704/77) PRRP2_IAHLO RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/EQUINE/LONDON/1416/73) PRRP2_IALE1 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 (A/LENINGRAD/134/57) PRRP2_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/LENINGRAD/134/17/57) PRRP2_IAP10 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/PINTAIL/ALBERTA/119/79) PRRP2_IAPUE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/PUERTO RICO/8/34) PRRP2_IARUD RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/RUDDY TURNSTONE/NEW JERSEY/47/ PRRP2_IASIN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/SINGAPORE/1/57) PRRP2_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/TURKEY/MINNESOTA/833/80) PRRP2_IAWIL RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 68-86 534-557 POLYMERASE SUBUNIT P2 A/WILSON-SMITH/33) PRRP2_IAZH2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/SWINE/HONG KONG/81/78) PRRP2_IAZH3 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/SWINE/HONG KONG/126/82) PRRP2_IAZ11 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/SWINE/IOWA/15/30) PRRP2_IAZTF RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 530-557 POLYMERASE SUBUNIT P2 A/SWINE/TENNESSEE/26/77) PRRP2_INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 32-54 POLYMERASE SUBUNIT P2 (B/ANN ARBOR/1/66 [COLD-ADAPED]) PRRP2_INBAD RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 32-54 POLYMERASE SUBUNIT P2 B/ANN ARBOR/1/66 [WILD-TYPE]) PRRP2_INBSI RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 32-54 POLYMERASE SUBUNIT P2 B/SINGAPORE/222/79) PRRP2_INCJI RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN 406-425 POLYMERASE SUBUNIT P2 C/JJ/50) PRRP3_IAANN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/ANN ARBOR/6/60) PRRP3_IABUD RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 POLYMERASE SUBUNIT P3 A/BUDERIGARI/IOKKAIDO/1/77) PRRP3_IACHI RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/CHILE/1/83) PRRP3_IAFPR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-567 POLYMERASE SUBUNIT P3 A/FOWL PLAGUE VIRUS/ ROSTOCK/34) PRRP3_IAFPW RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/FOWL PLAGUE VIRUS/ WEYBRIDGE) PRRP3_IAGU2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/GULL/MARYLAND/704/77) PRRP3_IAGUA RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/GULL/ASTRAKHAN/227/84) PRRP3_IAKH6 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/EQUINE/KENTUCKY/2/86) PRRP3_IAHLO RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/EQUINE/LONDON/1416/73) PRRP3_IAHPR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/EQUINE/PRAGUE/1/56) PRRP3_IAKIE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 542-560 POLYMERASE SUBUNIT P3 A/KEIV/59/79) PRRP3_IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/KOREA/426/68) PRRP3_IALE1 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/LENINGRAD/134/57) PRRP3_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/LENINGRAD/134/17/57) PRRP3_IALE3 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/LENINGRAD/134/47/57) PRRP3_IAMAN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/MALLARD/NEW YORK/6750/78) PRRP3_IAME8 RNA-DIRECTED RNA 219-234 542-560 POLYMERASE SUBUNIT P3 PRRP3_IANT6 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/NT/60/68) PRRP3_IAUPE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 469-485 542-560 POLYMERASE SUBUNIT P3 A/PUERTO RICO/8/34) PRRP3_IAURD RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/RUDDY TURNSTONE/ NEW JERSEY/47/ PRRP3_IASE2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/SEAL/MASSACHUSETTS/133/82) PRRP3_IASIN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/SINGAPORE/1/57) PRRP3_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/TURKEY/MINNESOTA/833/80) PRRP3_IAVI7 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/VICTORIA/3/75) PRRP3_IAWIL RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/WILSON-SMITH/33) PRRP3_IAZI1 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/SWINE/IOWA/15/30) PRRP3_IAZTE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/SWINE/TENNESSEE/24/77) PRRP3_INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 71-86 535-561 POLYMERASE SUBUNIT P3 B/ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP3_INBAD RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 71-86 535-561 POLYMERASE SUBUNIT P3 B/ANN ARBOR/1/66 [WILD-TYPE]) PRRP3_INCBE RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN 74-96 552-571 POLYMERASE SUBUNIT P3 C/BERLIN/1/85) PRRP3_INCJJ RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN 74-96 552-571 POLYMERASE SUBUNIT P3 C/JJ/50) PRRP3_THOGV RNA-DIRECTED RNA THOGOTO VIRUS 85-101 POL SUBUNIT P3 PRRPA_CVH22 RNA-DIRECTED RNA HUMAN CORONAVIRUS 82-104 410-436 858-878 1482-1507 1523-1542 1543-1568 2125-2149 2974-2992 3537-3559 POLYMERASE (STRAIN 229E) PRRPA_CVMJD RNA-DIRECTED RNA MURINE HEPATITIS VIRUS 440-467 POLYMERASE (STRAIN DEFECTIVE JHM) PRRPA_CVMJH RNA-DIRECTED RNA MURINE CORONAVIRUS MHV 917-938 1188-1215 1338-1354 1422-1449 1461-1480 1567-1585 1783-1806 2165-2192 2337-2354 POLYMERASE (STRAIN JHM) 2470-2494 2660-2676 2944-2961 3229-3255 3405-3425 3933-3954 PRRPB_BEV RNA-DIRECTED RNA BERNE VIRUS 806-832 1509-1527 1738-1757 2137-2154 POLYMERASE PRRPB_CVMA5 RNA-DIRECTED RNA MURINE CORONAVIRUS MHV 385-412 1302-1324 1835-1850 2698-2723 POLYMERASE (STRAIN A59) PRRPB_CVMJH RNA-DIRECTED RNA MURINE CORONAVIRUS MHV 385-412 746-770 1302-1324 1833-1848 2696-2721 POLYMERASE (STRAIN JHM) PRRPB_CVPFS RNA-DIRECTED RNA PORCINE TRANSMISSIBLE 173-200 482-508 POLYMERASE GASTROENTERITIS CORONA- VIRUS (STRAIN PRRPB_CVPR8 RNA-DIRECTED RNA PORCINE RESPIRATORY 80-106 POLYMERASE CORONAVIRUS (STRAIN 86/137004/BRITISH I PRRPB_IBVB RNA-DIRECTED RNA AVIAN INFECTIOUS BRONCHITIS 140-164 338-365 887-911 1335-1352 1654-1674 POLYMERASE VIRUS (STRAIN BEAUDETTE) PRRPL_BVT10 RNA-DIRECTED RNA BLUETONGUE VIRUS 21-41 146-161 POLYMERASE (SEROTYPE 10/ISOLATE USA) PRRPL_BUNYW RNA POLYMERASE BUNYAMWERA VIRUS 78-104 303-324 440-465 1096-1116 1317-1338 1343-1365 1539-1554 1869-1886 2001-2027 PRRPL_EBOV RNA-DIRECTED RNA EBOLA VIRUS 16-31 POLYMERASE PRRPL_HANTV RNA POLYMERASE HANTAAN VIRUS (STRAIN 76-118) 151-168 173-194 596-611 1561-1585 2081-2105 PRRPL_HRSV RNA POLYMERASE BETA HUMAN RESPIRATORY 3-19 SUBUNIT SYNCYTIAL VIRUS PRRPL_HRSVA RNA POLYMERASE BETA HUMAN RESPIRATORY 3-19 1181-1206 1425-1447 1633-1653 1929-1948 2018-2037 SUBUNIT SYNCYTIAL VIRUS (STRAIN A2) PRRPL_MABVM RNA-DIRECTED RNA MARBURG VIRUS (STRAIN 15-30 144-169 223-248 317-341 471-492 546-569 931-946 1042-1067 1410-1436 POLYMERASE MUSOKE) 1711-1731 1990-2017 2071-2094 PRRPL_MABVP RNA-DIRECTED RNA MARBURG VIRUS (STRAIN POPP) 15-30 144-169 223-248 471-492 546-569 931-946 1042-1067 1410-1436 1677-1696 POLYMERASE 1715-1731 1805-1832 1990-2017 2071-2094 2223-2246 PRRPL_MEASE RNA POLYMERASE BETA MEASLES VIRUS (STRAIN 285-312 617-632 998-1023 1160-1185 1279-1304 1920-1940 2038-2063 SUBUNIT EDMONSTON) PRRPL_MUMPM RNA POLYMERASE BETA MUMPS VIRUS (STRAIN 43-66 110-135 265-280 962-988 1100-1124 1132-1153 1601-1622 2128-2143 SUBUNIT MIYAHARA VACCINE) PRRPL_NDVB RNA POLYMERASE BETA NEWCASTLE DISEASE VIRUS 704-724 1571-1592 1967-1994 2040-2067 SUBUNIT (STRAIN BEAUDETTE C/45) PRRPL_P12HT RNA POLYMERASE BETA HUMAN PARAINFLUENZA 2 VIRUS 109-124 268-291 308-334 1309-1335 1562-1588 1985-2010 2215-2334 SUBUNIT (STRAIN TOSHIBA) PRRPL_P13H4 RNA POLYMERASE BETA HUMAN PARAINFLUENZA 3 VIRUS 172-193 304-330 844-861 885-900 1848-1868 2068-2084 2111-2134 SUBUNIT (STRAIN NIH 47885) PRRPL_PUUMH RNA-DIRECTED RNA PUUMALA VIRUS (STRAIN 173-194 596-611 1561-1585 1677-1696 2086-2110 POLYMERASE HALLNAS B1) PRRPL_RABVP RNA POLYMERASE BETA RABIES VIRUS (STRAIN PV) 266-286 542-563 741-762 1446-1461 1492-1517 SUBUNIT PRRPL_RABVS RNA POLYMERASE BETA RABIES VIRUS (STRAIN SAD B19) 266-286 542-563 741-762 1446-1461 1492-1517 1744-1761 SUBUNIT PRRPL_RDV RNA-DIRECTED RNA RICE DWARF VIRUS 10-27 533-560 680-697 1293-1316 POLYMERASE PRRPL_RVFVZ RNA-DIRECTED RNA RIFT VALLEY FEVER VIRUS 582-609 2009-2035 POLYMERASE (STRAIN ZH-548 M12) PRRPL_SEND5 RNA POLYMERASE BETA SENDAI VIRUS (STRAIN Z/ 64-83 104-120 194-218 844-861 885-900 1405-1420 1844-1864 2107-2128 SUBUNIT HOST MUTANTS) PRRPL_SENDE RNA POLYMERASE BETA SENDAI VIRUS (STRAIN ENDERS) 14-38 664-681 705-720 1225-1240 1664-1684 1927-1948 SUBUNIT PRRPL_SENDZ RNA POLYMERASE BETA SENDAI VIRUS (STRAIN Z) 64-83 104-120 194-218 844-861 885-900 1405-1420 1884-1864 2107-2128 SUBUNIT PRRPL_SEOU8 RNA-DIRECTED RNA SEOUL VIRUS (STRAIN 80-39) 151-168 173-194 394-419 596-611 1561-1585 2081-2105 POLYMERASE PRRPL_SV5WR RNA POLYMERASE BETA SIMIAN VIRUS 5 (STRAIN 43-66 108-124 263-289 1094-1118 1124-1147 1558-1580 2117-2137 SUBUNIT 21004-WR) PRRPL_SYNV RNA POLYMERASE BETA SONCHUS YELLOW NET VIRUS 126-146 391-406 605-627 704-731 863-883 886-911 1484-1510 1776-1792 SUBUNIT PRRPL_TSWVB RNA-DIRECTED RNA TOMATO SPOTTED WILT VIRUS 958-974 1385-1410 1778-1800 2609-2627 2678-2702 POLYMERASE (BRAZILIAN ISOLATE CPNH/BR-01) PRRPL_UUK RNA POLYMERASE UUKUNIEME VIRUS 698-714 923-948 1404-1431 1570-1591 2060-2081 PRRPL_VSVJH RNA POLYMERASE BETA VESICULAR STOMATITIS VIRUS 156-183 312-339 903-928 1956-1982 2080-2097 SUBUNIT (SEROTYPE NEW JERSEY/ STRAIN HA PRRPL_VSVJO RNA POLYMERASE BETA VESICULAR STOMATITIS VIRUS 156-183 312-339 1956-1982 2080-2101 SUBUNIT (SEROTYPE NEW JERSEY/ STRAIN OG PRRPL_VSVSJ RNA POLYMERASE BETA VESICULAR STOMATITS VIRUS 1956-1982 SUBUNIT (STRAIN SAN JUAN) PRRPO_ACLSV RNA-DIRECTED RNA APPLE CHLOROTIC LEAF 226-247 1036-1054 1132-1155 1775-1201 POLYMERASE SPOT VIRUS PRRPO_BWYVF PUTATIVE RNA-DIRECTED BEET WESTERN YELLOWS VIRUS 299-326 RNA POL (ISOLATE FL-1) PRRPO_BYDV1 PUTATIVE RNA-DIRECTED BARLEY YELLOW DWARF VIRUS 359-386 391-416 505-532 RNA POL (ISOLATE MAV-PS1) PRRPO_BYDVP PUTATIVE RNA-DIRECTED BARLEY YELLOW DWARF VIRUS 359-386 391-416 505-532 RNA POL (ISOLATE PAV) PRRPO_BYDVR PUTATIVE RNA-DIRECTED BARLEY YELLOW DWARF VIRUS 359-386 391-416 505-532 RNA POL (ISOLATE P-PAV) PRRPO_CARMV PROBABLE RNA-DIRECTED CARNATION MOTTLE VIRUS 4-30 92-107 327-350 818-833 RNA POL PRRPO_CGMVS PUTATIVE RNA-DIRECTED CUCUMBER GREEN MOTTLE 443-466 574-591 1017-1032 1523-1539 RNA POL MOSAIC VIRUS (WATERMELON STRAIN S PRRPO_CNV PROBABLE RNA-DIRECTED CUCUMBER NECROSIS VIRUS 277-300 345-371 470-494 RNA POL PRRPO_CRV PROBABLE RNA-DIRECTED CYMBIDIUM RINGSPOT VIRUS 96-111 345-371 470-494 RNA POL PRRPO_IPNVJ PUTATIVE RNA-DIRECTED INFECTIOUS PANCREATIC 221-238 RNA POL NECROSIS VIRUS (SEROTYPE JASPER) PRRPO_LYCVA RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGI- 35-52 597-613 659-682 988-1008 1234-1258 1770-1795 2077-2099 TIS VIRUS (STRAIN ARMSTRONG) PRRPO_LYCVW RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGI- 35-52 TIS VIRUS (STRAIN WE) PRRPO_MCMV PROBABLE RNA-DIRECTED MAIZE CHLOROTIC MOTTLE 16-41 101-127 573-599 RNA POL VIRUS PRRPO_PEAMV RNA-DIRECTED RNA PEA ENATION MOSAIC VIRUS 144-161 316-336 431-456 558-574 POLYMERASE PRRPO_PLRV1 PUTATIVE RNA-DIRECTED POTATO LEAFROLL VIRUS 331-358 576-600 RNA POL (STRAIN 1) PRRPO_PLRVW PUTATIVE RNA-DIRECTED POTATO LEAFROLL VIRUS 331-358 576-600 RNA POL (STRAIN WAGENINGEN) PRRPO_PPMVS PUTATIVE RNA-DIRECTED PEPPER MILD MOTTLE VIRUS 375-395 702-726 1069-1096 1491-1507 RNA POL (STRAIN SPAIN) PRRPO_RCNMV PUTATIVE RNA-DIRECTED RED CLOVER NECROTIC 278-300 RNA POL MOSAIC VIRUS PRRPO_REOVJ RNA-DIRECTED RNA REOVIRUS (TYPE 2/STRAIN 161-176 POLYMERASE D5/JONES) PRRPO_REOVL RNA-DIRECTED RNA REOVIRUS (TYPE 1/STRAIN LANG) 161-176 POLYMERASE PRRPO_ROTBR RNA-DIRECTED RNA BOVINE ROTAVIRUS (STRAIN RF) 132-156 247-269 844-861 904-921 942-967 1027-1046 SUBUNIT VP1 PRRPO_ROTBU RNA-DIRECTED RNA BOVINE ROTAVIRUS (STRAIN UK) 132-156 247-269 844-861 904-921 942-967 1027-1046 SUBUNIT VP1 PRRPO_ROTPC RNA-DIRECTED RNA PORCINE ROTAVIRUS 198-223 254-274 318-337 769-784 856-878 936-952 SUBUNIT VP1 (GROUP C/STRAIN COWDEN) PRRPO_ROTPG RNA-DIRECTED RNA PORCINE ROTAVIRUS 32-53 57-72 132-156 247-269 844-861 904-921 942-967 1027-1046 SUBUNIT VP1 (STRAIN GOTTFRIED) PRRPO_ROTS1 RNA-DIRECTED RNA SIMIAN 11 ROTAVIRUS 132-156 247-269 844-861 904-921 942-967 1027-1046 SUBUNIT VP1 (STRAIN SA11) PRRPO_SBMV PROBABLE RNA-DIRECTED SOUTHERN BEAN MOSAIC VIRUS 38-64 122-143 188-206 287-302 444-466 625-643 825-846 RNA POL PRRPO_TACV RNA POLYMERASE TACARIBE VIRUS 88-1 07 369-389 1281-1301 1676-1692 2019-2046 PRRPO_TBSVC PUTATIVE RNA-DIRECTED TOMATO BUSHY STUNT VIRUS 277-300 345-371 470-494 RNA POL (STRAIN CHERRY) PRRPO_TCV PUTATIVE RNA-DIRECTED TURNIP CRINKLE VIRUS 31-58 241-263 RNA POL PRRPO_TMGMV PUTATIVE RNA-DIRECTED TOBACCO MILD GREEN MOSAIC 209-231 1085-1100 RNA POL VIRUS (TMV STRAIN U2) PRRPO_TMV PUTATIVE RNA-DIRECTED TOBACCO MOSAIC VIRUS 700-724 1090-1105 1587-1610 RNA POL (VULGARE) PRRPO_TMVKR PUTATIVE RNA-DIRECTED TOBACCO MOSAIC VIRUS 700-724 1090-1105 1587-1610 RNA POL (STRAIN KOREAN) PRRPO_TMVTO PUTATIVE RNA-DIRECTED TOBACCO MOSAIC VIRUS 700-724 1090-1105 1151-1170 1587-1610 RNA POL (STRAIN TOMATO/L) PRRPO_TNVA RNA-DIRECTED RNA TOBACCO NECROSIS VIRUS 113-135 POLYMERASE (STRAIN A) PRRPO_TNVD RNA-DIRECTED RNA TOBACCO NECROSIS VIRUS 5-26 POLYMERASE (STRAIN D) PRRPP_CHAV RNA POLYMERASE ALPHA CHANDIPURA VIRUS (STRAIN 124-146 SUBUNIT 1653514) PRRPP_MUMP1 RNA POLYMERASE ALPHA MUMPS VIRUS (STRAIN SBL-1) 211-238 SUBUNIT PRRPP_MUMPE RNA POLYMERASE ALPHA MUMPS VIRUS (STRAIN ENDERS) 212-239 SUBUNIT PRRPP_MUMPM RNA POLYMERASE ALPHA MUMPS VIRUS (STRAIN 212-239 SUBUNIT MIYAHARA VACCINE) PRRPP_NDVA RNA POLYMERASE ALPHA NEWCASTLE DISEASE VIRUS 256-276 SUBUNIT (STRAIN AUSTRALIA- VICTORIA/32) PRRPP_NDVB RNA POLYMERASE ALPHA NEWCASTLE DISEASE VIRUS 256-276 SUBUNIT (STRAIN BEAUDETTE C/45) PRRPP_P12H RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 216-243 SUBUNIT PRRPP_P12HT RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 216-243 SUBUNIT (STRAIN TOSHIBA) PRRPP_P14HA RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 4A 220-247 SUBUNIT VIRUS (STRAIN TOSHIBA) PRRPP_P14HB RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 4B 220-247 SUBUNIT VIRUS (STRAIN 68-333) PRRPPP_PIRYV RNA POLYMERASE ALPHA PIRY VIRUS 134-161 SUBUNIT PRRPP_RABVA RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN AVO1) 8-32 SUBUNIT PRRPP_RABVC RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN CVS-11) 8-32 SUBUNIT PRRPP_RABVE RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN ERA), 8-32 216-237 SUBUNIT AND (STRAIN PM) PRRPP_RABVP RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN PV) 8-32 216-237 SUBUNIT PRRPP_RABVS RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN SAD B19) 8-32 216-237 SUBUNIT PRRPP_SV5 RNA POLYMERASE ALPHA SIMINA VIRUS 5 (STRAIN W3) 199-226 282-301 SUBUNIT PRRPP_VSVJO RNA POLYMERASE ALPHA VESICULAR STOMATITIS VIRUS 197-223 SUBUNIT (SEROTYPE NEW JERSEY/ STRAIN OG PS27R_ASFB7 5273R PROTEIN AFRICAN SWINE FEVER VIRUS 196-218 (STRAIN BA71V) PSODC_VACCC SUPEROXIDE DISMUTASE VACCINIA VIRUS (STRAIN 19-40 LIKE PROTEIN COPENHAGEN) PSODC_VACCV SUPEROXIDE DISMUTASE VACCINIA VIRUS (STRAIN WR) 19-40 LIKE PROTEIN PSODC_VARV SUPEROXIDE DISMUTASE VARIOLA VIRUS 19-40 LIKE PROTEIN PSPHR_AMEPV SHEROIDIN AMSACTA MOOREI 58-79 627-646 ENTOMOMPOXVIRUS PSPHR_CBEPV SHEROIDIN PRECURSOR CHORISTONEURA BIENNIS 177-201 ENTOMOPOXVIRUS PSPI1_MYXVL SERPIN 1 MYXOMA VIRUS (STRAIN 62-80 217-243 LAUSANNE) PSWFA_SPVKA SWF8A PROTEIN SWINEPOX VIRUS (STRAIN 61-83 KASZA) PTALA_BFDV LARGE T ANTIGEN BUDGERIGAR FLEDGLING 354-369 DISEASE VIRUS PTALA_POVBA LARGE T ANTIGEN POLYOMAVIRUS BK (STRAIN AS) 202-224 429-444 PTALA_POVBK LARGE T ANTIGEN POLYOMAVIRUS BK 202-224 429-444 PTALA_POVBO LARGE T ANTIGEN BOVINE POLYOMAVIRUS 385-400 PTALA_POVHA LARGE T ANTIGEN HAMSTER POLYOMAVIRUS 43-69 549-564 PTALA_POVJC LARGE T ANTIGEN POLYOMAVIRUS VIRUS JC 201-223 428-443 PTATAL_POVLY LARGE T ANTIGEN LYMPHOTROPIC POLYOMAVIRUS 43-69 516-542 PTALA_POVM3 LARGE T ANTIGEN MOUSE POLYOMAVIRUS 576-591 (STRAIN 3) PTALA_POVMA LARGE T ANTIGEN MOUSE POLYOMAVIRUS 574-589 (STRAIN A2) PTALA_POVMC LARGE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN 571-586 CRAWFORD SMALL-PLAQUE) PTALA_POVMK LARGE T ANTIGEN MOUSE POLYOMAVIRUS 173-191 278-304 446-472 (STRAIN KILHAM) PTALA_SV40 LARGE T ANTIGEN SIMIAN VIRUS 40 (SV40) 200-222 427-442 PTAMI_POVHA MIDDLE T ANTIGEN HAMSTER POLYOMAVIRUS 43-69 PTASM_POVHA SMALL T ANTIGEN HAMSTER POLYOMAVIRUS 43-69 PTASM_POVLY SMALL T ANTIGEN LYMPHOTROPIC POLOMAVIRUS 43-69 PTASM_POVMK SMALL T ANTIGEN MOUSE POLYOMAVIRUS 43-69 67-89 (STRAIN KILHAM) PTATR_NPVAC TRANS-ACTIVATING TRANS AUTOGRAPHA CALIFORNICA 406-431 REG PROTEIN NUCLEAR POLYHEDROSIS VIRUS PTATR_NPVBM TRANS-ACTIVATING TRANS BOMBYX MORI NUCLEAR 411-436 REG PROTEIN POLYHEDROSIS VIRUS PTATR_NPVOP TRANS-ACTIVATING TRANS ORGYIA PSEUDOTSUGATA 389-414 REG PROTEIN MULTICAPSID POLYHEDROSIS VIRUS PTAT_BIV06 TRANS-ACTIVATING TRANS BOVINE IMMUNODEFICIENCY 44-59 REG PROTEIN VIRUS (ISOLATE 106) PTAT_BIV27 TRANS-ACTIVATING TRANS BOVINE IMMUNODEFICIENCY 44-59 REG PROTEIN VIRUS (ISOLATE 127) PTAT_HTL1A TRANS-ACTIVATING TRANS HUMAN T-CELL LEUKEMIA VIRUS 192-210 REG PROTEIN TYPE 1 (STRAIN ATK) PTAT_HTL1C TRANS-ACTIVATING TRANS HUMAN T-CELL LEUKEMIA VIRUS 192-210 REG PROTEIN TYPE 1 (CARIBBEAN ISOLATE) PTAT_HV1U4 TAT PROTEIN HUMAN IMMUNODEFICIENCY 18-43 VIRUS TYPE 1 (STRAIN UNANDAN/ISO PTCB_FLV T-CELL RECEPTOR BETA FELINE LEUKEMIA VIRUS 6-22 98-118 CHAIN PRECURSOR PTEGP_HSVEB PROBABLE TEGUMENT EQUINE HERPESVIRUS TYPE 1 101-118 PHOSPHOPROTEIN (STRAIN AB4P) PTEGP_HSVEK TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 101-118 (STRAIN KENTUCKY A) PTEGU_EBV LARGE TEGUMENT PROTEIN EPSTEIN-BARR VIRUS 143-166 767-789 814-835 1052-1075 1194-1220 1469-1496 1869-1893 3061-3077 3102-3126 (STRAIN B95-8) PTEGU_HCMVA PROBABLE LARGE HUMAN CYTOMEGALOVIRUS 342-358 644-668 1061-1077 1307-1322 1323-1345 1410-1446 1509-1536 1957-1974 2199-2221 TEGUMENT PROTEIN (STRAIN AD169) PTEGU_HSV11 LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 12-27 623-646 1732-1759 (TYPE 1/STRAIN 17) PTEGU_HSV6G LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 131-152 345-365 615-636 1027-1043 1308-1328 1562-1579 (TYPE 6/STRAIN GS) PTEGU_HSVEB LARGE TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 432-456 559-582 1072-1099 1107-1132 1618-1640 1764-1791 2263-2285 (STRIN AB4P) PTEGU_HSVSA PROBABLE LARGE HERPESVIRUS SAIMIRI 467-491 714-737 989-1008 1121-1137 1155-1174 1177-1193 1503-1525 1607-1622 1898-1915 TEGUMENT PROTEIN (STRAIN 11) 2421-2349 PTEGU_VZVD LARGE TEGUMENT PROTEIN VARICELLA-ZOSTER VIRUS 433-456 494-511 711-728 801-823 895-920 1013-1034 1360-1376 1632-1657 1780-1807 (STRAIN DUMAS) 2008-2029 2270-2287 2694-2711 PTERM_ADE02 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 2 63-80 593-616 PTERM_ADE05 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 5 63-80 593-616 PTERM_ADE07 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 7 63-80 580-603 PTERM_ADE12 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 12 46-63 334-350 546-569 PTOP2_ASFB7 DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS 119-146 686-707 (STRAIN BA71V) PTOP2_ASFM2 DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS 119-146 685-706 (ISOLATE MALAWI LIL 20/1) PTR14_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 139-165 TRL14 (STRAIN AD169) PTREL_AVIRE REL TRANSFORMING AVIAN RETICULOENDOTHELIOSIS 56-74 PROTEIN VIRUS PTYSY_VZVD THYMIDYLATE SYNTHASE VARICELLA-ZOSTER VIRUS 11-29 (STRAIN DUMAS) PU15R_HSV6U POSSIBLE GANCICLOVIR HERPES SIMPLEX VIRUS 400-415 KINASE (TYPE 6/STRAIN UGANDA-1102) PU2L_HSV6U PROTEIN 2L HERPES SIMPLEX VIRUS 4-27 (TYPE 6/STRAIN UGANDA-1102) PUDPE_NPVAC UDP-GLUCOSYLTRANSFER- AUTOGRAPHA CALIFORNICA 452-477 ASE PRECURSOR NUCLEAR POLYHEDROSIS VIRUS PUL02_HCMVA HYPOTHETICAL PROTEIN UL2 HUMAN CYTOMEGALOVIRUS 25-49 (STRAIN AD169) PUL05_HCMVA HYPOTHETICAL PROTEIN UL5 HUMAN CYTOMEGALOVIRUS 11-37 (STRAIN AD169) PUL06_EBV VIRION PROTEIN BBRF1 EPSTEIN-BARR VIRUS 253-268 (STRAIN B95-8) PUL06_HCMVA HYPOTHETICAL PROTEIN UL6 HUMAN CYTOMEGALOVIRUS 191-208 (STRAIN AD169) PUL06_HSV11 VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS 404-429 (TYPE 1/STRAIN 17) PUL06_HSVEB VIRION GENE 56 PROTEIN EQUINE HERPESVIRUS TYPE 1 437-461 (STRAIN AB4P) PUL06_HSVSA VIRION GENE 43 PROTEIN HERPES VIRUS SAIMIRI 44-60 (STRAIN 11) PUL07_EBV BBRF2 PROTEIN EPSTEIN-BARR VIRUS 127-149 (STRAIN B95-8) PUL07_HCMVA HYPOTHETICAL PROTEIN UL7 HUMAN CYTOMEGALOVIRUS 88-108 186-209 (STRAIN AD169) PUL07_HSV11 PROTEIN UL7 HERPES SIMPLEX VIRUS 177-200 (TYPE 1/STRAIN 17) PUL07_HSVEB GENE 55 PROTEIN EQUINE HERPES VIRUS TYPE 1 11-32 (STRAIN AB4P) PUL07_HSVSA GENE 42 PROTEIN HERPESVIRUS SAIMIRI 44-61 (STRAIN 11) PUL07_VZVD GENE 53 PROTEIN VARICELLA-ZOSTER VIRUS 158-176 202-224 (STRAIN DUMAS) PUL08_HSV11 PROTEIN UL8 HERPES SIMPLEX VIRUS 514-538 705-726 (TYPE 1/STRAIN 17) PUL08_VZVD GENE 52 PROTEIN VARICELLA-ZOSTER VIRUS 228-255 593-616 (STRAIN DUMAS) PUL09_HSV11 ORIGIN OF REPLICATION HERPES SIMPLEX VIRUS 564-584 BINDING PROTEIN (TYPE 1/STRAIN 17) PUL09_HSVEB ORIGIN OF REPLICATION EQUINE HERPESVIRUS TYPE 1 171-196 612-628 BINDING PROTEIN (STRAIN AB4P) PUL09_VZVD ORIGIN OF REPICATION VARICELLA-ZOSTER VIRUS 68-92 168-190 484-508 BINDING PROTEIN (STRAIN DUMAS) PUL11_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 223-247 UL11 (STRAIN AD169) PUL13_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 449-467 UL13 (STRAIN AD169) PUL14_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 280-299 UL14 (STRAIN AD169) PUL14_HSV11 HYPOTHETICAL UL14 HERPES SIMPLEX VIRUS 96-116 PROTEIN (TYPE 1/STRAIN 17) PUL14_HSVEB HYPOTHETICAL GENE 48 EQUINE HERPESVIRUS TYPE 1 100-127 PROTEIN (STRAIN AB4P) PUL16_HSV11 PROTEIN UL16 HERPES SIMPLEX VIRUS 22-49 (TYPE 1/STRAIN 17) PUL16_HSVEB GENE 46 PROTEIN EQUINE HERPESVIRUS TYPE 1 26-43 98-119 324-339 (STRAIN AB4P) PUL16_HSVSA GENE 33 PROTEIN HERPESVIRUS SAIMIRI 69-87 278-295 (STRAIN 11) PUL16_VZVD GENE 44 PROTEIN VARICELLA-ZOSTER VIRUS 65-80 317-332 (STRAIN DUMAS) PUL17_EBV PROTEIN BGLF1 EPSTEIN-BARR VIRUS 373-393 (STRAIN B95-8) PUL17_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 60-82 UL17 (STRAIN AD169) PUL17_HSV11 PROTEIN UL17 HERPES SIMPLEX VIRUS 156-181 (TYPE 1/STRAIN 17) PUL17_HSVSA GENE 32 PROTEIN HERPESVIRUS SAIMIRI 94-118 348-370 (STRAIN 11) PUL19_HCMVA TYPOTHETICAL PROTEIN HUMAN CYTOMEAGLOVIRUS 61-85 UL19 (STRAIN AD169) PUL20_PRVN3 UL20 MEMBRANE PROTEIN PSEUDORABIES VIRUS 54-76 HOMOLOG (STRAIN NIA-3) PUL20_VZVD GENE 39 MEMBRANE VARICELLA-ZOSTER VIRUS 201-224 PROTEIN (STRAIN DUMAS) PUL21_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 91-110 UL21 (STRAIN AD169) PUL21_HSV11 PROTEIN UL21 HERPES SIMPLEX VIRUS 98-114 130-146 (TYPE 1/STRAIN 17) PUL21_USV1E PROTEIN UL21 HERPES SIMPLEX VIRUS 98-114 130-146 (TYPE 1/STRAIN HFEM) PUL21_HSVEB GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1 119-142 294-321 379-403 412-427 (STRAIN AB4P) PUL21_VZVD GENE 38 PROTEIN VARICELLA-ZOSTER VIRUS 270-293 300-327 (STRAIN DUMAS) PUL22_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 44-67 UL22 (STRAIN AD169) PUL24_EBV PROTEIN BXRF1 EPSTEIN-BARR VIRUS 134-155 (STRAIN B95-8) PUL24_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 206-222 UL24 (STRAIN AD169) PUL24_HSV11 PROTEIN UL24 HERPES SIMPLEX VIRUS 147-166 (TYPE 1/STRAIN 17) PUL24_ILTVT PROTEIN UL24 INFECTIOUS LARYNGOTRACHEI- 158-179 HOMOLOG TIS VIRUS (STRAIN THORNE V882) PUL25_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 484-500 UL25 (STRAIN AD169) PUL25_HSV11 VIRION PROTEIN UL25 HERPES SIMPLEX VIRUS 86-101 (TYPE 1/STRAIN 17) PUL25_HSVEB VIRION PROTEIN UL25 EQUINE HERPESVIRUS TYPE 1 89-104 130-147 (STRAIN AB4P) PUL25_HSVSA VIRION GENE 19 PROTEIN HERPESVIRUS SAIMIRI 244-265 344-368 (STRAIN 11) PUL25_ILTVT 64 1 KD VIRION PROTEIN INFECTIOUS LARYNGOTRACHEI- 270-287 316-336 TIS VIRUS (STRAIN THRONE V882) PUL27_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 307-324 486-507 UL27 (STRAIN AD169) PUL29_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 239-266 UL29 (STRAIN AD169) PUL30_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 9-32 UL30 (STRAIN AD169) PUL31_EBV PROTEIN BFLF2 EPSTEIN-BARR VIRUS 273-296 (STRAIN B95-8) PUL31_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 410-437 582-602 UL31 (STRAIN AD169) PUL31_HSV11 PROTEIN UL31 HERPES SIMPLEX VIRUS 95-116 (TYPE 1/STRAIN 17) PUL31_HSVEB GENE 29 PROTEIN EQUINE HERPESVIRUS TYPE 1 104-125 288-309 (STRAIN AB4P) PUL31_HSVSA GENE 69 PROTEIN HERPESVIRUS SAIMIRI 145-161 163-190 (STRAIN 11) PUL31_VZVD GENE 27 PROTEIN VARICELLA-ZOSTER VIRUS 117-138 295-316 (STRAIN DUMAS) PUL32_HSV11 PROBABLE MAJOR ENV HERPES SIMPLEX VIRUS 127-143 564-585 GLYCOPROTEIN UL32 (TYPE 1/STRAIN 17) PUL32_HSVEB MAJOR ENVELOPE EQUINE HERPESVIRUS TYPE 1 81-108 GLYCOPROTEIN 300 (STRAIN AB4P) PUL32_VZVD PROBABLE MAJOR ENV VARICELL-ZOSTER VIRUS 553-574 GLYCOPROTEIN 26 (STRAIN DUMAS) PUL33_HCMVA G-PROTEIN COUPLED REC HUMAN CYTOMEGALOVIRUS 76-102 HOMOLOG UL33 (STRAIN AD169) PUL34_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 214-232 297-321 UL34 (STRAIN AD169) PUL34_HSV11 VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS 251-275 (TYPE 1/STRAIN 17) PUL34_HSVEB VIRION GENE 26 PROTEIN EQUINE HERPESVIRUS TYPE 1 249-264 (STRAIN AB4P) PUL34_HSVSA GENE 67 PROTEIN HERPESVIRUS SAIMIRI 207-229 (STRAIN 11) PUL34_VZVD VIRION GENE 24 PROTEIN VARICELL-ZOSTER VIRUS 244-266 (STRAIN DUMAS) PUL35_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 229-252 310-329 331-348 UL35 (STRAIN AD169) PUL36_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 143-168 387-410 UL36 (STRAIN AD169) PUL37_EBV PROTEIN BOLF1 EPSTEIN-BARR VIRUS 21-36 135-155 707-730 984-1004 (STRAIN B95-8) PUL37_HSV11 PROTEIN UL37 HERPES SIMPLEX VIRUS 229-252 262-277 445-467 665-681 758-777 925-947 1009-1028 (TYPE 1/STRAIN 17) PUL37_HSVEB GENE 23 PROTEIN EQUINE HERPESVIRUS TYPE 1 414-440 491-510 664-690 778-805 901-919 (STRAIN AB4P) PUL37_HSVSA GENE 63 PROTEIN HERPESVIRUS SIAMIRI 5-20 (STRAIN 11) PUL37_VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS 4-19 104-124 140-165 168-191 196-212 229-244 248-269 670-694 776-803 (STRAIN DUMAS) 904-923 PUL38_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 199-220 UL38 (STRAIN AD169) PUL40_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 18-35 UL40 (STRAIN AD169) PUL41_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 15-31 116-134 UL41 (STRAIN AD169) PUL43_HSV11 MEMBRANE PROTEIN UL43 HERPES SIMPLEX VIRUS 41-63 139-160 343-365 394-421 (TYPE 1/STRAIN 17) PUL43_HSVEB GENE 17 MEMBRANE EQUINE HERPESVIRUS TYPE 1 34-60 86-107 PROTEIN (STRAIN AB4P) PUL43_VZVD GENE 17 MEMBRANE VARICELLA-ZOSTER VIRUS 88-114 127-146 160-180 277-299 374-400 PROTEIN (STRAIN DUMAS) PUL45_HSV11 PROTEIN UL45 HERPES SIMPLEX VIRUS 25-46 (TYPE 1/STRAIN 17) PUL45_HSV1K PROTEIN UL45 HERPES SIMPLEX VIRUS 25-46 (TYPE 1/STRAIN KOS) PUL45_HSV1M PROTEIN UL45 HERPES SIMPLEX VIRUS 25-46 (TYPE 1/STRAIN MP) PUL47_HCMVA PROTEIN UL47 HUMAN CYTOMEGALOVIRUS 193-218 438-464 533-556 614-640 741-766 (STRAIN AD169) PUL47_HSV11 VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS 404-425 (TYPE 1/STRAIN 17) PUL47_HSV1F VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS 404-425 (TYPE 1/STRAIN F) PUL47_HSVBP 80 7 KD ALPHA BOVINE HERPESVIRUS TYPE 1 681-702 TRANS-INDUCING PROTEIN (STRAIN P8-2) PUL47_HSVE4 97 KD ALPHA EQUINE HERPESVIRUS TYPE 4 580-601 TRANS-INDUCING PROTEIN PUL47_HSVEB 97 KD ALPHA EQUINE HERPESVIRUS TYPE 1 587-608 TRANS-INDUCING PROTEIN (STRAIN AB4P) PUL47_VZVD ALPHA TRANS-INDUCING VARICALLA-ZOSTER VIRUS 42-58 608-627 FACTOR 91 8 KD PROTEIN (STRAIN DUMAS) PUL49_EBV HYPOTHETICAL BFRF2 EPSTEIN-BARR VIRUS 336-358 PROTEIN (STRAIN B95-8) PUL49_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 248-264 528-543 UL49 (STRAIN AD169) PUL49_HSV11 TEGUMENT PROTEIN UL49 HERPES SIMPLEX VIRUS 226-252 (TYPE 1/STRAIN 17) PUL49_HSVSA HYPOTHETICAL GENE 66 HERPESVIRUS SAIMIRI 232-253 PROTEIN (STRAIN 11) PUL50_HCMVA PROTEIN UL50 HUMAN CYTOMEGALOVIRUS 96-119 (STRAIN AD169) PUL51_HSV11 PROTEIN UL51 HERPES SIMPLEX VIRUS 49-66 (TYPE 1/STRAIN 17) PUL51_HSVE4 GENE 8 PROTEIN EQUINE HERPESVIRUS TYPE 4 169-190 (STRAIN 1942) PUL51_HSVEB GENE 8 PROTEIN EQUINE HERPESVIRUS TYPE 1 166-189 (STRAIN AB4P) PUL51_VZVD GENE 7 PROTEIN VARICELLA-ZOSTER VIRUS 30-49 (STRAIN DUMAS) PUL52_EBV PROBABLE DNA EPSTEIN-BARR VIRUS 44-59 REPLICATION PROTEIN BSLF1 (STRAIN B95-8) PUL52_HSV11 DNA REPLICATION HERPES SIMPLEX VIRUS 17-37 65-91 PROTEIN UL52 (TYPE 1/STRAIN 17) PUL52_HSVE4 DNA REPLICATION EQUINE HERPESVIRUS TYPE 4 8-27 PROTEIN UL52 (STRAIN 1942) PUL52_HSVEB DNA REPLICATION EQUINE HERPESVIRUS TYPE 1 8-27 135-159 316-337 PROTEIN UL52 (STRAIN AD4P) PUL52_HSVSA PROBABLE DNA HERPESVIRUS SAIMIRI 489-508 586-605 REPLICATION GENE 56 (STRAIN 11) PROTEIN PUL52_VZVD PROBABLE DNA VARICELLA-ZOSTER VIRUS 446-466 645-670 REPLICATION GENE 6 (STRAIN DUMAS) PROTEIN PUL53_HCMVA PROTEIN UL53 HUMAN CYTOMEGALOVIRUS 173-188 (STRAIN AD169) PUL53_HSV6U UL53 PROTEIN HOMOLOG HERPES SIMPLEX VIRUS 64-80 (TYPE 6/STRAIN UGANDA-1102) PUL60_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 120-141 UL60 (STRAIN AD169) PUL62_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 62-84 178-205 UL62 (STRAIN AD169) PUL68_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 87-107 UL68 (STRAIN AD169) PUL70_HCMVA PROBABLE DNA HUMAN CYTOMEGALOVIRUS 225-252 409-430 499-514 626-645 770-793 REPLICATION PROTEIN UL70 (STRAIN AD169) PUL71_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 234-250 UL71 (STRAIN AD169) PUL73_EBV HYPOTHETICAL BLRF1 EPSTEIN-BARR VIRUS 62-87 PROTEIN (STRAIN B95-8) PUL73_HSVSA HYPOTHETICAL GENE 53 HERPESVIRUS SAIMIRI 51-73 PROTEIN (STRAIN 11) PUL74_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 12-32 UL74 (STRAIN AD169) PUL77_HCMVA VIRION PROTEIN UL77 HUMAN CYTOMEGALOVIRUS 268-291 607-628 (STRAIN AD169) PUL78_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 71-90 190-205 UL78 (STRAIN AD169) PUL79_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 40-58 UL79 (STRAIN AD169) PUL84_HCMVA 65 KD EARLY HUMAN CYTOMEGALOVIRUS 100-116 NONSTRUCTURAL PROTEIN (STRAIN AD169) PUL84_HCMVT 65 KD EARLY HUMAN CYTOMEGALOVIRUS 100-116 NONSTRUCTURAL PROTEIN (STRAIN TOWNE) PUL87_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS 406-422 530-557 B(C)RF1 (STRAIN B95-8) PUL87_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 205-231 309-335 606-628 633-653 757-781 UL87 (STRAIN AD169) PUL87_HSV6U HYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS 301-322 507-529 (TYPE 6/STRAIN UGANDA-1102) PUL87_HSVSA HYPOTHERICAL GENE 24 HERPESVIRUS SAIMIRI 365-387 402-422 579-595 PROTEIN (STRAIN 11) PUL88_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 173-191 252-279 UL88 (STRAIN AD169) PUL88_HSV6U HYPOTHETICAL PROTEIN 6R HERPES SIMPLEX VIRUS 150-173 (TYPE 6/STRAIN UGANDA-1102) PUL90_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 35-50 UL90 (STRAIN AD169) PUL91_HSV6U HYPOTHETICAL PROTEIN 8R HERPES SIMPLEX VIRUS 43-65 (TYPE 6/STRAIN UGANDA-1102) PUL92_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 76-99 UL92 (STRAIN AD169) PUL92_HSV6U HYPOTHETICAL PROTEIN 9R HERPES SIMPLEX VIRUS 36-55 100-119 (TYPE 6/STRAIN UGANDA-1102) PUL94_HCMVA PROTEIN UL94 HUMAN CYTOMEGALOVIRUS 49-70 PUL95_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS 201-223 BGLF3 (STRAIN B95-8) PUL95_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 508-526 UL95 (STRAIN AD169) PUL95_HSV6U HYPOTHETICAL PROTEIN 13R HERPES SIMPLEX VIRUS 9-30 328-346 (TYPE 6/STRAIN UGANDA-1102) PUL95_HSVSA HYPOTHETICAL GENE 34 HERPESVIRUS SAIMIRI 187-209 PROTEIN (STRAIN 11) PUL97_HCMVA GANCICLOVIR KINASE HUMAN CYTOMEGALOVIRUS 208-228 541-567 (STRAIN AD169) PULA2_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 168-185 UL102 (STRAIN AD169) PULA3_HCMVA PROTEIN UL103 HUMAN CYTOMEGALOVIRUS 26-47 (STRAIN AD169) PULA4_HCMVA VIRION PROTEIN UL104 HUMAN CYTOMEGALOVIRUS 215-235 423-450 (STRAIN AD169) PULA8_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 93-118 UL108 (STRAIN AD169) PILB1_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 60-81 UL111 (STRAIN AD169) PULB3_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 298-319 UL113 (STRAIN AD169) PULB7_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 178-195 UL117 (STRAIN AD169) PULB8_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 103-130 UL118 (STRAIN AD169) PULC1_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 129-153 UL121 (STRAIN AD169) PULD2_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 4-22 UL132 (STRAIN AD169) PUNG_FOWP1 URACIL-DNA GLUCOSYLASE FOWLPOX VIRUS (STRAIN FP-1) 12-37 PUNG_HSVEB URACIL-DNA GLUCOSYLASE EQUINE HERPESVIRUS TYPE 1 224-250 (STRAIN AB4P) PUNG_VACCC URACIL-DNA GLUCOSYLASE VACCINIA VIRUS (STRAIN 82-103 COPENHAGEN) PUNG_VACCV URACIL-DNA GLUCOSYLASE VACCINIA VIRUS (STRAIN WR) 82-103 PUNG_VARV URACIL-DNA GLUCOSYLASE VARIOLA VIRUS 82-103 PUNG_VZVD URACIL-DNA GLUCOSYLASE VARICELLA-ZOSTER VIRUS 217-243 (STRAIN DUMAS) PUS02_HSVEB GENE 68 PROTEIN EQUINE HERPESVIRUS TYPE 1 48-63 (STRAIN AB4P) PUS02_HSVEK US1 PROTEIN EQUINE HERPESVIRUS TYPE 1 48-63 (STRAIN KENTUCKY A) PUS02_PRVN3 PROTEIN US2 HOMOLOG PSEUDORABIES VIRUS 120-136 (STRAIN NIA-3) PUS03_HCMVA HQLF1 PROTEIN HUMAN CYTOMEGALOVIRUS 24-39 (STRAIN AD169) PUS05_HSV11 PUTATIVE GLYCOPROTEIN HERPES SIMPLEX VIRUS 53-70 US5 (TYPE 1/STRAIN 17) PUS05_HSV2 PUTATIVE GLYCOPROTEIN HERPES SIMPLEX VIRUS 53-70 US5 (TYPE 2) PUS09_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 179-206 HXLF3 (STRAIN AD169) PUS11_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 98-113 HXLF1 (STRAIN AD169) PUS12_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 29-50 113-135 195-222 HVLF6 (STRAIN AD169) PUS13_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 11-33 208-231 HVLF5 (STRAIN AD169) PUS14_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 236-260 HVLF4 (STRAIN AD169) PUS15_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 378-402 443-466 HVLF3 (STRAIN AD169) PUS16_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 151-174 243-267 HVLF2 (STRAIN AD169) PUS17_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 110-126 HVLF1 (STRAIN AD169) PUS19_HCMVA MEMBRANE PROTEIN HUMAN CYTOMEGALOVIRUS 120-142 178-202 214-232 HWLF4 (STRAIN AD169) PUS21_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 41-67 155-182 HWLF2 (STRAIN AD169) PUS22_HCMVA EARLY NUCLEAR PROTEIN HUMAN CYTOMEGALOVIRUS 270-292 HWLF1 (STRAIN AD169) PUS23_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 292-310 HHLF7 (STRAIN AD169) PUS24_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 352-373 HHLF6 (STRAIN AD169) PUS28_HCMVA G-PROTEIN COUPLED REC HUMAN CYTOMEGALOVIRUS 34-49 140-160 HOMOLOG US28 (STRAIN AD169) PUS28_HCMVT G-PROTEIN COUPLED REC HUMAN CYTOMEGALOVIRUS 34-49 140-160 HOMOLOG US28 (STRAIN TOWNE) PUS29_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 246-269 HHRF4 (STRAIN AD169) PUS30_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 102-128 208-233 HHRF5 (STRAIN AD169) PUS33_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 41-59 HHLF3 (STRAIN AD169) PV07K_LSV 7 KD PROTEIN LILY SYMPTOMLESS VIRUS 27-46 PV07K_NMV 7 KD PROTEIN POTATO VIRUS S (STRAIN 28-49 PERUVIAN) PV07K_PVSP 7 KD PROTEIN POTATO VIRUS X (PVX) 31-48 PV07K_PVX 7 KD PROTEIN POTATO VIRUS X (STRAIN X3) 31-48 PV07K_PVXX3 7 KD PROTEIN POTATO VIRUS X (STRAIN XC) 31-48 (STRAIN CP) PV117_ASFL5 LIS 121-1 PROTEIN AFRICAN SWINE FEVER VIRUS 73-94 (STRAIN LIS57) PV121_ASFL5 125 KD PROTEIN ALFALFA MOSAIC VIRUS 59-79 (STRAIN 425/ISOLATE LEIDEN) PV12K_PVMR 12 KD PROTEIN POTATO VIRUS M (STRAIN 79-96 RUSSIAN) PV13K_TRVPL 16 KD PROTEIN TOBACCO RATTLE VIRUS 24-51 (STRAIN PLB) PV143_NPVAC HELICASE AUTOGRAPHA CALIFORNICA 79-102 846-863 1013-1037 NUCLEAR POLYHEDROSIS VIRUS PV14K_BSVM 14 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS 14-29 80-99 (BSMV) PV18K_MLVAB 18 KD PROTEIN ABELSON MURINE LEUKEMIA 29-44 128-154 VIRUS PV19R_VACCV PROTEIN B19 VACCINIA VIRUS (STRAIN WR) 114-132 152-172 PV1A_BBMV 1A PROTEIN BROAD BEAN MOTTLE VIRUS 196-220 752-771 PV1A_BMV 1A PROTEIN BROME MOSAIC VIRUS 747-767 PV1A_CCMV 1A PROTEIN COWPEA CHLOROTIC MOTTLE 744-763 VIRUS PV1A_CMVFN 1A PROTEIN CUCUMBER MOSAIC VIRUS 775-800 (STRARIN FNY) PV1A_CMVO 1A PROTEIN CUCUMBER MOSAIC VIRUS 775-800 (STRAIN O) PV1A_CMVQ 1A PROTEIN CUCUMBER MOSAIC VIRUS 774-799 (STRAIN Q) PV1A_PSVJ 1A PROTEIN PEANUT STUNT VIRUS (STRAIN J) 472-493 783-808 PV23K_HSVTH 23 5 KD PROTEIN TURKEY HERPESVIRUS 176-191 (STRAIN H2) PV28K_PLRV1 28 KD PROTEIN POTATO LEAFROLL VIRUS 60-76 192-207 (STRAIN 1) ( PV28K_PLRVW 28 KD PROTEIN POTATO LEAFROLL VIRUS 60-76 192-207 (STRAIN WAGENINGEN) PV29K_BWYVF 29 KD PROTEIN BEET WESTERN YELLOWS VIRUS 22-43 136-157 (ISOLATE FL-1) PV29K_PEBV 29 6 KD PROTEIN PEA EARLY BROWNING VIRUS 114-132 PV2A_BMV 2A PROTEIN BROME MOSAIC VIRUS 285-303 759-777 PV2A_CCMV 2A PROTEIN COWPEA CHLOROTIC MOTTLE 296-314 VIRUS PV2A_TAV 2A PROTEIN TOMATO ASPERMY VIRUS 234-255 PV30K_TRVTC 29 1 KD PROTEIN TOBACCO RATTLE VIRUS 62-82 (STRAIN TCM) PV31K_TOBSV 31 7 KD PROTEIN TOBACCO STREAK VIRUS 226-250 (STRAIN WC) PV362_ASFB7 K 362 PROTEIN AFRICAN SWINE FEVER VIRUS 145-164 (STRAIN BA71V) PV375_ASFL5 LIS 375 PROTEIN AFRICAN SWINE FEVER VIRUS 114-135 (STRAIN LIS57) PV382_ASFL5 LIS 382 PROTEIN AFRICAN SWINE FEVER VIRUS 114-135 (STRAIN LIS57) PV3A_CCMV COWPEA CHLOROTIC 160-187 MOTTLE VIRUS PV3A_CMVFN 3A PROTEIN CUCUMBER MOSAIC VIRUS 214-235 (STRAIN FNY) PV3A_CMVM 3A PROTEIN CUCUMBER MOSAIC VIRUS 214-235 (STRAIN M) PV3A_CMVO 3A PROTEIN CUCUMBER MOSAIC VIRUS 214-235 (STRAIN O) PV3A_CMVQ 3A PROTEIN CUCUMBER MOSAIC VIRUS 214-235 (STRAIN Q) PV3A_CMVY CUCUMBER MOSAIC VIRUS 214-235 (STRAIN Y) PV3A_IBVB 3A PROTEIN AVAIN INFECTIOUS BRONCHITIS 5-28 VIRUS (STRAIN BEAUDETTE) PV3A_IBVM 3A PROTEIN AVAIN INFECTIOUS BRONCHITIS 5-28 VIRUS (STRAIN M41) PV3A_IBVP3 3A PROTEIN AVAIN INFECTIOUS BRONCHITIS 5-28 VIRUS (STRAIN PORTUGAL/322/82) PV3A_IBVU5 3A PROTEIN AVAIN INFECTIOUS BRONCHITIS 5-28 VIRUS (STRAIN UK/183/66) PV3A_TAV 3A PROTEIN TOMATO ASPERMY VIRUS 147-168 PV58K_BSMV 58 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS 320-340 PV66K_BWYVF PROTEIN 6B CANINE ENTERIC CORONAVIRUS 97-116 (STRAIN K378) PV70K_TYMVA 69 KD PROTEIN TURNIP YELLOW MOSAIC VIRUS 12-35 (AUSTRALIAN ISOLATE) PV90K_AMVLE 90 KD PROTEIN ALFALFA MOSAIC VIRUS (STRAIN 44-59 425/ISOLATE LEIDEN) PVA04_VACCC PROTEIN A4 VACCINIA VIRUS (STRAIN 217-244 COPENHAGEN) PVA04_VACCV PROTEIN A4 VACCINIA VIRUS (STRAIN WR) 217-244 PVA04_VARV PROTEIN A4 VARIOLA VIRUS 207-234 PVA09_VACCC PROTEIN A9 VACCINIA VIRUS (STRAIN 41-66 COPENHAGEN) PVA09_VARV PROTEIN A9 VARIOLA VIRUS 41-66 PVA11_VACCC PROTEIN A11 VACCINIA VIRUS (STRAIN 23-44 140-159 299-317 COPENHAGEN) PVA11_VARV PROTEIN A11 VARIOLA VIRUS 23-44 141-160 300-318 PVA14_VACCC PROTEIN A14 VACCINIA VIRUS (STRAIN 39-62 COPENHAGEN) PVA14_VARV PROTEIN A14 VARIOLA VIRUS 39-62 PVA16_VACCC PROTEIN A16 VACCINIA VIRUS (STRAIN 341-362 COPENHAGEN) PVA16_VARV PROTEIN A16 VARIOLA VIRUS 340-361 PVA18_VACCC 56 KD ABORTIVE LATE VACCINIA VIRUS (STRAIN 429-447 PROTEIN COPENHAGEN) PVA18_VACCV 56 KD ABORTIVE LATE VACCINIA VIRUS (STRAIN WR) 429-447 PROTEIN PVA18_VARV 56 KD ABORTIVE LATE VARIOLA VIRUS 429-447 PROTEIN PVA20_VACCC PROTEIN A20 VACCINIA VIRUS (STRAIN 107-131 193-209 COPENHAGEN) PVA20_VARV PROTEIN A20 VARIOLA VIRUS 107-131 193-209 PVA23_VARV PROTEIN A23 VARIOLA VIRUS 58-82 PVA28_VACCV PROTEIN A28 VACCINIA VIRUS (STRAIN WR), 53-76 AND (STRAIN COPENHAGEN) PVA28_VARV PROTEIN A28 VARIOLA VIRUS 53-76 PVA32_VACCV PROTEIN A32 VACCINIA VIRUS (STRAIN WR), 205-220 AND (STRAIN COPENHAGEN) PVA32_VARV PROTEIN A32 VARIOLA VIRUS 175-190 PVA35_VACCC PROTEIN A35 PRECURSOR VACCINIA VIRUS (STRAIN 33-49 COPENHAGEN) PVA35_VACCV PROTEIN A35 PRECURSOR VACCINIA VIRUS (STRAIN WR) 33-49 141-164 PVA37_VACCC PROTEIN A37 VACCINIA VIRUS (STRAIN 66-90 COPENHAGEN) PVA37_VACCV PROTEIN A37 VACCINIA VIRUS (STRAIN WR) 66-90 PVA40_VACCC PROTEIN A40 VACCINIA VIRUS (STRAIN 4-30 COPENHAGEN) PVA41_VACCC PROTEIN A41 PRECURSOR VACCINIA VIRUS (STRAIN 47-71 COPENHAGEN) PVA41_VACCV PROTEIN A41 PRECURSOR VACCINIA VIRUS (STRAIN WR) 47-71 PVA41_VARV PROTEIN A41 PRECURSOR VARIOLA VIRUS 47-71 PVA47-VACCC PROTEIN A47 VACCINIA VIRUS (STRAIN 59-79 201-226 COPENHAGEN) PVA47_VACCV PROTEIN A47 VACCINIA VIRUS (STRAIN WR) 59-79 201-226 PVA47_VARV PROTEIN A47 VARIOLA VIRUS 59-79 201-226 PVA55-VACCC PROTEIN A55 VACCINIA VIRUS (STRAIN 247-266 384-404 COPENHAGEN) PVA55_VACCV PROTEIN A55 VACCINIA VIRUS (STRAIN WR) 247-266 384-404 PVAL1_BCTV AL1 PROTEIN BEET CURLY TOP VIRUS 56-75 VAL1_CLVK AL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN 55-74 WEST KENYAN 844) PVAL1_CLVN AL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN 55-74 NIGERIAN) PVAL3_BCTV AL3 PROTEIN BEET CURLY TOP VIRUS 82-108 PVAL3_CLVK AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN 77-97 WEST KENYAN 844) PVAL3_CLVN AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN 77-97 NIGERIAN) PVAL3_TYLCM AL3 PROTEIN TOMATO YELLOW LEAF CURL 78-97 VIRUS (STRAIN MARMANDE) PVAL3_TYLCV AL3 PROTEIN TOMATO YELLOW LEAF CURL 77-97 VIRUS PVAT_CAMVC APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 134-157 PROTEIN (STRAIN CM-1841) PVAT_CAMVD APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 134-157 PROTEIN (STRAIN D/H) PVAT_CAMVE APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 134-157 PROTEIN (STRAIN BBC) PVAT_CAMVN APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 134-157 PROTEIN (STRAIN NY8153) PVAT_CAMVP APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 134-157 PROTEIN (STRAIN PV147) PVAT_CAMVS APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 134-157 PROTEIN (STRAIN STRASBOURG) PVAT_CAMVW APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 34-60 PROTEIN (STRAIN W260) PVAT_CERV APHID TRANSMISSION CARNATION ETCHED RING VIRUS 141-161 PROTEIN PVAT_FMVD APHID TRANSMISSION FIGWORT MOSAIC VIRUS 132-159 PROTEIN (STRAIN DXS) PVB02_VACCC PROTEIN B2 VACCINIA VIRUS (STRAIN 155-170 COPENHAGEN) PVB02_VACCV PROTEIN B2 VACCINIA VIRUS (STRAIN WR) 155-170 PVB04_VACCC PROTEIN B4 VACCINIA VIRUS (STRAIN 155-170 COPENHAGEN) PVB04_VACCV PROTEIN B4 VACCINIA VIRUS (STRAIN WR) 489-511 PVB04_VARV PROTEIN B4 VARIOLA VIRUS 489-511 PVB05_VACC0 PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN 251-271 PROTEIN PRECURSOR LC16MO) PVB05_VACCC PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN 251-271 PROTEIN PRECUROSR COPENHAGEN) PVB05_VACCL PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN LISTER) 251-271 PROTEIN PRECURSOR PVB05_VACCV PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN WR) 251-271 PROTEIN PRECURSOR PVB06_VACCV PROTEIN B6 VACCINIA VIRUS (STRAIN WR) 59-82 AND (STRAIN COPENHAGEN) PVB15_VACCC PROTEIN B15 VACCINIA VIRUS (STRAIN 121-143 COPENHAGEN) PVB15_VACCV PROTEIN B15 VACCINIA VIRUS (STRAIN WR) 121-143 PVB15_VARV PROTEIN B15 VARIOLA VIRUS 121-143 PVB17_VACCC PROTEIN B17 VACCINIA VIRUS (STRAIN 157-179 COPENHAGEN) PVB17_VACCV PROTEIN B17 VACCINIA VIRUS (STRAIN WR) PVBL1_CLVK BL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN 34-51 WEST KENYAN 844) PVBL1_CLVN BL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN 34-51 NIGERIAN) PVBL1_SLCV BL1 PROTEIN SQUASH LEAF CURL VIRUS 245-268 PVBRL1_ABMVW BR1 PROTEIN ABUTILON MOSAIC VIRUS 166-191 (ISOLATE WEST INDIA) PVBR1_BGMV BR1 PROTEIN BEAN GOLDEN MOSAIC VIRUS 166-191 PVBR1_PYMVV BR1 PROTEIN POTATO YELLOW MOSAIC VIRUS 166-191 (ISOLATE VENEZUELA) PVBR1_SLCV BR1 PROTEIN SQUASH LEAF CURL VIRUS PVC01_VACCC PROTEIN C1 VACCINIA VIRUS (STRAIN 70-90 COPENHAGEN) PVC01_VACCV PROTEIN C1 VACCINIA VIRUS (STRAIN WR) 75-95 PVC01_VARV PROTEIN C1 VARIOLA VIRUS 58-78 PVC02_SFVKA HYPOTHETICAL PROTEIN C2 SHOPE FIBROMA VIRUS 8-31 (STRAIN KASZA) PVC03_SFVKA G-PROTEIN COUPLED SHOPE FIBROMA VIRUS 98-123 179-197 RECEPTOR HOMOLOG C3 (STRAIN KASZA) PVC04_VACCC PROTEIN C4 VACCINIA VIRUS (STRAIN 182-209 COPENHAGEN) PVC04_VACCV PROTEIN C4 VACCINIA VIRUS (STRAIN WR) 183-208 PVC05_SFVKA HYPOTHETICAL PROTEIN C6 SHOPE FIBROMA VIRUS 20-47 (STRAIN KASZA) PVC08_SFVKA HYPOTHETICAL PROTEIN C8 SHOPE FIBROMA VIRUS 14-30 (STRAIN KASZA) PVC09_VACCC PROTEIN C9 VACCINIA VIRUS (STRAIN 40-59 COPENHAGEN) PVC09_VACCV PROTEIN C9 VACCINIA VIRUS (STRAIN WR) 40-59 PVC10_SFVKA HYPOTHETICAL PROTEIN C10 SHOPE FIBROMA VIRUS 85-109 (STRAIN KASZA) PVC10_VACCC PROTEIN C10 VACCINIA VIRUS (STRAIN 42-64 COPENHAGEN) PVC10_VACCV PROTEIN C10 VACCINIA VIRUS (STRAIN WR) 42-64 PVC10_VARV PROTEIN C10 VARIOLA VIRUS 42-64 PVC16_VACCC PROTEIN C16/B22 VACCINIA VIRUS (STRAIN 41-68 COPENHAGEN) PVC17_VACCC PROTEIN C17/B23 VACCINIA VIRUS (STRAIN 301-326 COPENHAGEN) PVC21_VACCC PROTEIN C21/B27 VACCINIA VIRUS (STRAIN 3-28 COPENHAGEN) PVCAP_EBV MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS 148-172 366-381 1072-1095 (STRAIN B95-8) PVCAP_HCMVA MAJOR CAPSID PROTEIN HUMAN CYTOMEGALOVIRUS 668-684 842-860 871-893 (STRAIN AD169) PVCAP_HSV11 MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS 283-302 358-384 1137-1152 (TYPE 1/STRAIN 17) PVCAP_HSVEB MAJOR CAPSID PROTEIN EQUINE HERPESVIRUS TYPE 1 357-383 872-898 (STRAIN AB4P) PVCAP_HSVSA MAJOR CAPSID PROTEIN HERPESVIRUS SAIMIRI 144-168 269-287 357-372 1062-1089 (STRAIN 11) PVCAP_PRVIS MAJOR CAPSID PROTEIN PSEUDORABIES VIRUS 335-362 (STRAIN INDIANA S) PVCAP_VZVD MAJOR CAPSID PROTEIN VARICELLA-ZOSTER VIRUS 381-401 891-910 1156-1176 (STRAIN DUMAS) PVCG3_NPVAC DNA-BINDING PROTEIN AUTOGRAPHA CALIFORNICA 60-81 NUCLEAR POLYHEDROSIS VIRUS PVD03_VACCC PROTEIN D3 VACCINIA VIRUS (STRAIN 12-39 COPENHAGEN) PVD03_VACCV PROTEIN D3 VACCINIA VIRUS (STRAIN WR) 12-39 PVD03_VARV PROTEIN D3 VARIOLA VIRUS 12-39 PVD05_FOWP1 92 6 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 246-265 315-337 PVD05_SFVKA PROTEIN D5 SHOPE FIBROMA VIRUS 54-78 171-198 (STRAIN KASZA) PVD05_VACCC PROTEIN D5 VACCINIA VIRUS (STRAIN 320-340 694-714 715-734 COPENHAGEN) PVD05_VACCV PROTEIN D5 VACCINIA VIRUS (STRAIN WR) 320-340 694-714 715-734 PVD05_VARV PROTEIN D5 VARIOLA VIRUS 320-340 694-714 715-734 PVDBP_CMAVC DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS 37-56 (STRAIN CM-1841) PVDBP_CMAVD DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS 37-56 (STRAIN D/H) PVDBP_CAMVE DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS 37-56 (STRAIN BBC) PVDBP_CAMVN DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS 37-56 (STRAIN NY8153) PVDBP_CAMVS DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS 37-56 (STRAIN STRASBOURG) PVE02_VACCC PROTEIN E2 VACCINIA VIRUS (STRAIN 70-97 355-380 540-558 COPENHAGEN) PVE02_VACCV PROTEIN E2 VACCINIA VIRUS (STRAIN WR) 70-97 355-380 540-558 PVE02_VARV PROTEIN E2 VARIOLA VIRUS 70-97 355-380 540-558 PVE05_VACCC PROTEIN E5 VACCINIA VIRUS (STRAIN 314-329 COPENHAGEN) PVE05_VACCD PROTEIN E5 VACCINIA VIRUS (STRAIN 324-339 DAIREN I) PVE05_VACCV PROTEIN E5 VACCINIA VIRUS (STRAIN WR) 324-339 PVE05_VARV PROTEIN E5 VARIOLA VIRUS 324-339 PVE06_VACCC PROTEIN E6 VACCINIA VIRUS (STRAIN 430-451 COPENHAGEN) PVE06_VACCV PROTEIN E6 VACCINIA VIRUS (STRAIN WR) 430-451 PVE06_VARV PROTEIN E6 VARIOLA VIRUS 251-267 430-451 PVE08_VACCC PROTEIN E8 VACCINIA VIRUS (STRAIN 254-270 COPENHAGEN) PVEO8_VACCV PROTEIN E8 VACCINIA VIRUS (STRAIN WR) 254-270 PVE08_VARV PROTEIN E8 VARIOLA VIRUS 254-270 PVE12_HPV16 PROBABLE E1 PROTEIN 2 HUMAN PAPILLOMAVIRUS 167-183 TYPE 16 PVE18_NPVAC EARLY 18 5 KD PROTEIN AUTOGRAPHA CALIFORNICA 106-113 NUCLEAR POLYHEDROSIS VIRUS PVE1_BPV1 E1 PROTEIN BOVINE PAPILLOMAVIRUS 265-282 517-533 TYPE 1 PVE1_BPV2 E1 PROTEIN BOVINE PAPILLOMAVIRUS 265-281 516-532 TYPE 2 PVE1_CRPVK E1 PROTEIN COTTONTAIL RABBIT (SHOPE) 7-22 PAPILLOMAVIRUS (STRAIN KANSAS) PVE1_HPV11 E1 PROTEIN HUMAN PAPILLOMAVIRUS 258-275 311-334 TYPE 11 PVE1_HPV13 E1 PROTEIN HUMAN PAPILLOMAVIRUS 308-324 TYPE 13 PVE1_HPV18 E1 PROTEIN HUMAN PAPILLOMAVIRUS 264-281 317-333 344-364 TYPE 18 PVE1_HPV31 E1 PROTEIN HUMAN PAPILLOMAVIRUS 237-254 TYPE 31 PVE1_HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS 238-260 TYPE 33 PVE1_HPV39 E1 PROTEIN HUMAN PAPILLOMAVIRUS 334-354 TYPE 39 PVE1_HPV41 E1 PROTEIN HUMAN PAPILLOMAVIRUS 363-380 TYPE 41 PVE1_HPV42 E1 PROTEIN HUMAN PAPILLOMAVIRUS 304-320 TYPE 42 PVE1_HPV58 E1 PROTEIN HUMAN PAPILLOMAVIRUS 238-260 TYPE 58 PVE1_HPV6B E1 PROTEIN HUMAN PAPILLOMAVIRUS 258-275 311-334 TYPE 6B PVE1_PCPV1 E1 PROTEIN PYGMY CHIMPANZEE 257-274 310-326 PAPILLOMAVIRUS TYPE 1 PVE1_RHPV1 E1 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1 286-309 PVE2_CRPVK PROBABLE E2 PROTEIN COTTONTAIL RABBIT (SHOPE) 308-333 PAPILLOMAVIRUS (STRAIN KANSAS) PVE2_HPV11 E2 PROTEIN HUMAN PAPILLOMAVIRUS 285-310 TYPE 11 PVE2_HPV13 E2 PROTEIN HUMAN PAPILLOMAVIRUS 295-320 TYPE 13 PVE2_HPV18 E2 PROTEIN HUMAN PAPILLOMAVIRUS 288-306 TYPE 18 PVE2_HPV1A E2 PROTEIN HUMAN PAPILLOMAVIRUS 284-300 TYPE 1A PVE2_HPV2A E2 PROTEIN HUMAN PAPILLOMAVIRUS 311-336 TYPE 2A PVE2_HPV31 E2 PROTEIN HUMAN PAPILLOMAVIRUS 294-312 TYPE 31 PVE2_HPV33 E2 PROTEIN HUMAN PAPILLOMAVIRUS 275-293 TYPE 33 PVE2_HPV35 E2 PROTEIN HUMAN PAPILLOMAVIRUS 289-307 TYPE 35 PVE2_HPV39 E2 PROTEIN HUMAN PAPILLOMAVIRUS 292-310 TYPE 39 PVE2_HPV42 E2 PROTEIN HUMAN PAPILLOMAVIRUS 321-338 TYPE 42 PVE2_HPV57 E2 PROTEIN HUMAN PAPILLOMAVIRUS 303-328 TYPE 57 PVE2_HPV6B E2 PROTEIN HUMAN PAPILLOMAVIRUS 286-311 TYPE 6B PVE2_PAPVD PROBABLE E2 PROTEIN DEER PAPIOLMAVIRUS 333-351 PVE2_PCPV1 E2 PROTEIN PYGMY CHIMPANZEE 295-320 PAPILLOMAVIRUS TYPE 1 PVE2_RHPV1 E2 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1 290-308 PVE4_HPV18 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 39-59 TYPE 18 PVE4_HPV41 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 56-76 TYPE 41 PVE4_HPV51 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 59-83 TYPE 51 PVE4_RHPV1 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 63-87 TYPE 1 PVE5A_HPV11 PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS 19-42 TYPE 11 PVE5A_HPV6C PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS 19-42 TYPE 6C PVE5_BPV1 E5 PROTEIN BOVINE PAPILLOMAVIRUS 2-26 TYPE 1 AND TYPE 2 PVE5_HPV13 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 19-42 TYPE 13 PVE5_HPV31 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 31-52 TYPE 31 PVE5_HPV42 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 45-65 TYPE 42 PVE5_HPV51 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 31-52 TYPE 51 PVE5_HPV5B PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 89-113 TYPE 5B PVE5_RHPV1 PROBABLE E5 PROTEIN RHESUS PAPILLOMAVIRUS 109-132 TYPE 1 PVE6_BPV1 E6 PROTEIN BOVINE PAPILLOMAVIRUS 23-41 TYPE 1 PVE6_CRPVK E6 PROTEIN COTTONTAIL RABBIT (SHOPE) 6-23 PAPILLOMAVIRUS (STRAIN KANSAS) PVE6_HPV08 E6 PROTEIN HUMAN PAPILLOMAVIRUS 133-151 TYPE 8 PVE6_HPV2A E6 PROTEIN HUMAN PAPILLOMAVIRUS 8-27 TYPE 2A PVE6_HPV33 E6 PROTEIN HUMAN PAPILLOMAVIRUS 9-26 TYPE 33 PVE6_HPV35 E6 PROTEIN HUMAN PAPILLOMAVIRUS 9-26 TYPE 35 PVE6_HPV51 E6 PROTEIN HUMAN PAPILLOMAVIRUS 9-26 TYPE 51 PVE6_HPV57 E6 PROTEIN HUMAN PAPILLOMAVIRUS 8-27 TYPE 57 PVE6_HPV58 E6 PROTEIN HUMAN PAPILLOMAVIRUS 9-26 TYPE 58 PVE6_MMPV E6 PROTEIN MICROMYS MINUTUS 7-33 36-60 PAPILLOMAVIRUS PVE7_CRPVK E7 PROTEIN COTTONTAIL RABBIT (SHOPE) 71-88 PAPILLOMAVIRUS (STRAIN KANSAS) PVE7_HPV13 E7 PROTEIN HUMAN PAPILLOMAVIRUS 77-93 TYPE 13 PVE7_HPV51 E7 PROTEIN HUMAN PAPILLOMAVIRUS 61-87 TYPE 51 PVE7_HPV6B E7 PROTEIN HUMAN PAPILLOMAVIRUS 20-37 TYPE 6B PVE7_RHPV1 E7 PROTEIN RHESUS PAPILLOMAVIRUS 79-105 TYPE 1 PVE94_NPVAC EARLY 94 KD PROTEIN AUTOGRAPHA CALIFORNICA 78-99 203-222 NUCLEAR POLYHEDROSIS VIRUS PVEF_GVTN VIRAL ENHANCING FACTOR TRICHOPLUSIA NI GRANULOSIS 154-175 237-260 677-696 VIRUS PVENV_BEV ENVELOPE PROTEIN BERNE VIRUS 62-86 87-114 PVENV_DHV11 ENVELOPE GLYCOPROTEIN DHORI VIRUS (STRAIN 42-57 484-511 PRECURSOR INDIAN/1313/61) PVENV_EAV PROBABLE ENVELOPE EQUINE ARTERITIS VIRUS 25-41 PROTEIN PVENV_LELV PROBABLE ENVELOPE LELYSTAD VIRUS 27-47 148-168 PROTEIN PVENNV_MCV1 MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOSUM 61-80 VIRUS SUBTYPE 1 PVENV_MCV2 MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOSUM 61-80 306-333 VIRUS SUBTYPE 2 PVENV_THOGV ENVELOPE GLYCOPROTEIN THOGOTO VIRUS 196-221 356-383 473-491 PRECURSOR PVETM_NPVAC ECORI-T SITE PROTEIN ETM AUTOGRAPHA CALIFORNICA 82-105 NUCLEAR POLYHEDROSIS VIRUS PVF05_VACCC 36 KD MAJOR MEMBRANE VACCININA VIRUS (STRAIN 280-305 PROTEIN PRECURSOR COPENHAGEN) PVF05_VACCP 36 KD MAJOR MEMEBRANE VACCINIA VIRUS (STRAIN L-IVP) 280-305 PROTEIN PRECURSOR PVF05_VACCV 36 KD MAJOR MEMBRANE VACCINIA VIRUS (STRAIN WR) 281-306 PROTEIN PRECURSOR PVF05_VARV 36 KD MAJOR MEMBRANE VARIOLA VIRUS 280-305 PROTEIN PRECURSOR PVF09_VACCC PROTEIN F9 VACCINIA VIRUS (STRAIN 176-200 COPENHAGEN), AND (STRAIN L-IVP) PVF09_VACCV PROTEIN F9 VACCINIA VIRUS (STRAIN WR) 176-200 PVF09_VARV PROTEIN F9 VARIOLA VIRUS 176-200 PFV11_VACCC PROTEIN F11 VACCINIA VIRUS (STRAIN 161-184 COPENHAGEN) PVF11_VARV PROTEIN F11 VARIOLA VIRUS 161-184 PVF15_VACCC PROTEIN F15 VACCINIA VIRUS (STRAIN 25-48 COPENHAGEN) PVF15_VACCP PROTEIN F15 VACCINIA VIRUS (STRAIN L-IVP) 3-26 PVF15_VARV PROTEIN F15 VARIOLA VIRUS 28-51 PVFP1_FOWPV PROTEIN FP1 FOWLPOX VIRUS 297-333 PVFP2_FOWPV PROTEIN FP2 FOWLPOX VIRUS 88-104 PVFP7_CAPVK PROTEIN F7 CAPRIPOXIVIRUS (STRAIN KS-1) 89-111 PVFP7_FOWPV PROTEIN FP7 FOWLPOX VIRUS 65-90 PVFP8_CAPVK CF8A PROTEIN CAPRIPOXVIRUS (STRAIN KS-1) 51-76 PVFUS_ORFNZ 10 KD FUSION PROTEIN ORF VIRUS (STRAIN NZ2) 29-48 PVFUS_VACC6 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAIN 72-94 WR 65-16) PVG01_HSVEB HYPOTHETICAL GENE 1 EQUINE HERPESVIRUS TYPE 1 169-195 PROTEIN (STRAIN AB4P) PVG01_HSV11 HYPOTHETICAL GENE 1 ICTALURID HERPESVIRUS 1 210-225 317-339 589-616 PROTEIN PVG01_VACCC PROTEIN G1 VACCINIA VIRUS (STRAIN 298-318 376-395 COPENHAGEN) PVG01_VACCV PROTEIN G1 VACCINIA VIRUS (STRAIN WR) 237-257 315-334 PVG01_VARV PROTEIN G1 VARIOLA VIRUS 298-318 376-395 PVG01_VZVD HYPOTHETICAL GENE 1 VARICELLA-ZOSTER VIRUS 58-82 PROTEIN (STRAIN DUMAS) PVG03_VACCC PROTEIN G3 VACCINIA VIRUS (STRAIN 50-72 COPENHAGEN) PVG03_VARV PROTEIN G3 VARIOLA VIRUS 50-72 PVG04_VACCC PROTEIN G4 VACCINIA VIRUS (STRAIN 11-33 COPENHAGEN) PVG04_VARV PROTEIN G4 VARIOLA VIRUS 11-33 PVG06_VACCC PROTEIN G6 VACCINIA VIRUS (STRAIN 31-51 COPENHAGEN) PVG06_VARV PROTEIN G6 VARIOLA VIRUS 31-51 PVG08_HSV11 HYPOTHETICAL GENE 8 ICTALURID HERPESVIRUS 1 134-149 159-185 MEMBRANE PROTEIN PVG10_HSV11 HYPOTHETICAL GENE 10 ICTALURID HERPESVIRUS 1 35-54 MEMBRANE PROTEIN PVG10_HSVSA HERPESVIRUS SAIMIRI HERPESVIRUS SAIMIRI 109-124 355-379 (STRAIN 11) PVG11_HSV11 HYPOTHETICAL GENE 11 ICTALURID HERPESVIRUS 1 103-122 150-176 ZINE-BINDING PROTEIN PVG12_HSV11 HYPOTHETICAL GENE 12 ICTALURID HERPESVIRUS 1 151-178 270-286 ZINC-BINDING PROTEIN PVG12_HSVSA HYPOTHETICAL GENE 12 HERPESVIRUS SAIMIRI 68-92 PROTEIN (STRAIN 11) PVG19_HSV11 HYPOTHETICAL GENE 19 ICTALURID HERPESVIRUS 1 88-112 MEMBRANE PROTEIN PVG1L_AMEPV G1L PROTEIN AMSACTA MOOREI 313-336 ENTOMOPOXVIRUS PVG1_SPV1R CAPSID PROTEIN SPIROPLASMA VIRUS 76-92 659-678 SPV1-R8A2 B PVG22_HSV11 HYPOTHETICAL GENE 22 ICTALURID HERPESVIRUS 1 300-327 PROTEIN PVG23_HSV11 HYPOTHETICAL GENE 23 ICTALURID HERPESVIRUS 1 314-335 PROTEIN PVG27_HSV11 HYPOTHETICAL GENE 27 ICTALURID HERPESVIRUS 1 158-184 PROTEIN PVG27_HSVSA HYPOTHETICAL GENE 27 HERPESVIRUS SAIMIRI 209-226 PROTEIN (STRAIN 11) PVG28-_HSV11 HYPOTHETICAL GENE 28 ICTALURID HERPESVIRUS 1 173-197 491-518 PROTEIN PVG28_HSVSA HYPOTHETICAL GENE 28 HERPESVIRUS SAIMIRI 14-40 PROTEIN (STRAIN 11) PVG29_HSV11 HYPOTHETICAL GENE 29 ICTALURID HERPESVIRUS 1 20-42 PROTEIN PVG30_HSV11 HYPOTHETICAL GENE 30 ICTALURID HERPESVIRUS 1 166-191 PROTEIN PVG32_VZVD GENE 32 PROTEIN VARICELLA-ZOSTER VIRUS 90-109 (STRAIN DUMAS) PVG36_HSVSA POSSIBLE TYROSINE- HERPESVIRUS SAIMIRI 108-123 344-362 PROTEIN KINASE (STRAIN 11) PVG37_HSV11 HYPOTHETICAL GENE 37 ICTALURID HERPESVIRUS 1 284-299 PROTEIN PVG39_HSV11 HYPOTHETICAL GENE 39 ICTALURID HERPESVIRUS 1 648-675 970-990 1038-1065 PROTEIN PVG40_HSV11 HYPOTHETICAL GENE 40 ICTALURID HERPESVIRUS 1 14-32 PROTEIN PVG41_HSV11 HYPOTHETICAL GENE 41 ICTALURID HERPESVIRUS 1 11-38 62-81 244-260 PROTEIN PVG43_HSV11 HYPOTHETICAL GENE 43 ICTALURID HERPESVIRUS 1 109-133 157-178 322-345 521-538 PROTEIN PVG46_HSV11 PROBABLE MAJOR ICTALURID HERPESVIRUS 1 134-156 580-607 937-963 1244-1270 GLYCOPROTEIN PVG48_HSV11 HYPOTHETICAL GENE 48 ICTALURID HERPESVIRUS 1 71-93 PROTEIN PVG50_HSVSA PROB TRANSCRIPTION HERPESVIRUS SAIMIRI 5-30 58-83 ACTIVATOR EDRF1 (STRAIN 11) PVG51_HSV11 HYP GENE 51 MEMBRANE ICTALURID HERPESVIRUS 1 29-49 84-102 PROTEIN PVG52_HSV11 HYPOTHETICAL GENE 52 ICTALURID HERPESVIRUS 1 229-252 PROTEIN PVG55_HSV11 HYPOTHETICAL GENE 55 ICTALURID HERPESVIRUS 1 22-37 143-158 288-309 PROTEIN PVG55_HSVSA HYPOTHETICAL GENE 55 HERPESVIRUS SAIMIRI 85-106 PROTEIN (STRAIN 11) PVG56_HSV11 HYPOTHETICAL GENE 56 ICTALURID HERPESVIRUS 1 1155-1176 PROTEIN PVG58_HSVSA GENE 58 PROTEIN HERPESVIRUS SAIMIRI 130-146 266-288 293-319 330-346 (STRAIN 11) PVG59_HSV11 HYP GENE 59 MEMBRANE ICTALURID HERPESVIRUS 1 142-161 267-289 PROTEIN PVG5_SPV4 GENE 5 PROTEIN SPIROPLASMA VIRUS 4 42-64 PVG60_HSV11 HYPOTHETICAL GENE 60 ICTALURID HERPESVIURS 1 30-51 53-75 PROTEIN PVG61_HSV11 HYPOTHETICAL GENE 61 ICTALURID HERPESVIRUS 1 76-102 117-136 PROTEIN PVG63_HSV11 HYPOTHETICAL GENE 63 ICTALURID HERPESVIRUS 1 238-259 336-363 PROTEIN PVG64_HSV11 HYPOTHETICAL GENE 64 ICTALURID HERPESVIRUS 1 420-445 PROTEIN PVG65_HSV11 HYPOTHETICAL GENE 65 ICTALURID HERPESVIRUS 1 117-137 155-173 362-378 518-533 1147-1174 1347-1369 PROTEIN PVG67_HSV11 HYPOTHETICAL GENE 67 ICTALURID HERPESVIRUS 1 108-132 171-188 318-344 722-745 1005-1029 1072-1091 1315-1341 PROTEIN PVG6_SPVIR GENE 6 PROTEIN SPIROPLASMA VIRUS 60-82 SPV1-R8A2 B PVG70_HSV11 HYPOTHETICAL GENE 70 ICTALURID HERPESVIRUS 1 184-209 PROTEIN PVG71_HSVSA HYPOTHETICAL GENE 71 HERPESVIRUS SAIMIRI 89-105 PROTEIN (STRAIN 11) PVG72_HSV11 HYPOTHETICAL GENE 72 ICTALURID HERPESVIRUS 1 445-471 535-561 720-744 1252-1269 PROTEIN PVG74_HSVSA G-PROTEIN COUPLED REC HERPESVIRUS SAIMIRI 124-151 HOMOLOG ECRF3 (STRAIN 11) PVG9_SPV1R GENE 9 PROTEIN SPIROPLASMA VIRUS 57-72 SPV1-R8A2 B PVGF1_IBVB F1 PROTEIN AVIAN INFECTIOUS BRONCHITIS 1587-1606 1856-1877 2108-2127 2210-2226 2788-2806 2973-2999 3073-3090 3120-3145 3374-3399 VIRUS (STRAIN BEAUDETTE) 3601-3625 PVGH3_HCMVA GLYCOPROTEIN H301 HUMAN CYTOMEGALOVIRUS 157-178 PRECURSOR (STRAIN AD169) PVGL1_CVPR8 E1 GLYCOPROTEIN PROCINE RESPIRATORY 174-193 PRECURSOR CORONAVIRUS (STRAIN 86/137004/BRITISH IS PVGL2_CVBF E2 GLYCOPROTEIN BOVINE CORONAVIRUS 10-33 123-139 174-190 264-279 991-1017 1259-1280 PRECURSOR (STRAIN F15) PVGL2_CVBL9 E2 GLYCOPROTEIN BOVINE CORONAVIRUS 123-139 174-190 264-279 651-674 991-1017 1259-1280 PRECURSOR (STRAIN L9) PVGL2_CVBLY E2 GLYCOPROTEIN BOVINE CORONAVIRUS 10-33 123-139 174-190 264-279 991-1017 1259-1280 PRECURSOR (STRAIN LY-138) PVGL2_CVBM E2 GLYCOPROTEIN BOVINE CORONAVIRUS 123-139 174-190 264-279 991-1017 1259-1280 PRECURSOR (STRAIN MEBUS) PVGL2_CVBQ E2 GLYCOPROTEIN BOVINE CORONAVIRUS 31-47 123-139 174-190 264-279 991-1017 1259-1280 PRECURSOR (STRAIN QUEBEC) PVGL2_CVBV E2 GLYCOPROTEIN BOVINE CORONAVIRUS 123-139 174-190 264-279 991-1017 1259-1280 PRECURSOR (STRAIN VACCINE) PVGL2_CVH22 E2 GLYCOPROTEIN HUMAN CORONAVIRUS 768-794 1053-1071 1115-1134 PRECURSOR (STRAIN 229E) PVGL2_CVM4 E2 GLYCOPROTEIN MURINE CORONAVIRUS 95-111 999-1025 1267-1290 1317-1338 PRECURSOR (STRAIN WILD TYPE 4) PVGL2_CVMA5 E2 GLYCOPROTEIN MURINE CORONAVIRUS 95-111 947-973 1215-1238 1265-1286 PRECURSOR (STRAIN A59) PVGL2_CVMJC E2 GLYCOPROTEIN MURINE CORONAVIRUS 95-111 999-1025 1267-1290 1317-1358 PRECURSOR (STRAIN JHMV/VARIANT CL-2) PVGL2_CVMJH E2 GLYCOPROTEIN MURINE CORONAVIRUS 95-111 858-884 1126-1149 1176-1197 PRECURSOR (STRAIN JHM) PVGL2_CVPFS E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE 64-83 442-457 800-816 1038-1064 1274-1297 PRECURSOR GASTROENTERITIS CORONAVIRUS (STRAIN PVGL2_CVPMI E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE 64-83 442-457 506-521 800-816 1038-1064 1274-1297 PRECURSOR GASTROENTERITIS CORONAVIRUS (STRAIN PVGL2_CVPPR E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE 64-83 440-455 504-519 798-814 1036-1062 1272-1295 PRECURSOR GASTROENTERITIS CORONAVIRUS (STRAIN PVGL2_CVPPU E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE 64-83 440-455 504-519 798-814 1036-1062 1272-1295 PRECURSOR GASTROENTERITIS CORONAVIRUS (STRAIN PVGL2_CVPR8 E2 GLYCOPROTEIN PORCINE RESPIRATORY 218-233 576-592 814-840 1050-1073 PRECURSOR CORONAVIRUS (STRAIN 86/137004/BRITISH I PVGL2_CVPRM E2 GLYCOPROTEIN PORCINE RESPIRATORY 218-233 576-592 814-840 1050-1073 PRECURSOR CORONAVIRUS (STRAIN RM4) PVGL2_CVPRT E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE 64-83 440-455 504-519 798-814 1036-1062 1272-1295 PRECURSOR GASTROENTERITIS CORONAVIRUS (STRAIN PVGL2_FIPV E2 GLYCOPROTEIN FELINE INFECTIOUS PERITONITIS 803-819 1041-1067 1277-1300 PRECURSOR VIRUS (STRAIN 79-1146) PVGL2_IBV6 E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 196-219 588-607 771-797 1056-1081 1094-1111 PRECURSOR VIRUS (STRAIN 6/82) PVGL2_IBVB E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 195-218 587-606 770-796 1055-1080 PRECURSOR VIRUS (STRAIN BEAUDETTE) PVGL2_IBVD2 E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 196-219 588-607 771-797 1056-1081 PRECURSOR VIRUS (STRAIN D274) ( PVGL2_IBVD3 E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 196-219 PRECURSOR VIRUS (STRAIN D3896) PVGL2_IBVK E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 195-218 587-606 770-796 1055-1080 PRECURSOR VIRUS (STRAIN KB8523) PVGL2_IBVM E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 195-218 378-398 587-606 770-796 1055-1080 PRECURSOR VIRUS (STRAIN M41) PVGL2_IBVU1 E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 178-201 VIRUS (STRAIN UK/123/82) PVGL2_IBVU2 E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 178-201 VIRUS (STRAIN UK/142/86) PVGL2_IBVU3 E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 178-201 VIRUS (STRAIN UK/167/84) PVGLB_EBV GLYCOPROTEIN GP110 EPSTEIN-BARR VIRUS 732-752 PRECURSOR (STRAIN B95-8) PVGLB_HCMVA GLYCOPROTEIN B HUMAN CYTOMEGALOVIRUS 535-558 706-732 750-777 PRECURSOR (STRAIN AD169) PVGLB_HCMVT GLYCOPROTEIN B HUMAN CYTOMEGALOVIRUS 536-559 707-733 751-778 PRECURSOR (STRAIN TOWNE) PVGLB_HSV11 GLYCOPROTEIN B HERPES SIMPLEX VIRUS 83-104 PRECURSOR (TYPE 1/STRAIN 17) PVGLB_HSV1F GLYCOPROTEIN B HERPES SIMPLEX VIRUS 82-103 PRECURSOR (TYPE 1/STRAIN F) PVGLB_HSV1K GLYCOPROTEIN B HERPES SIMPLEX VIRUS 82-103 PRECURSOR (TYPE 1/STRAIN KOS) PVGLB_HSV1P GLYCOPROTEIN B HERPES SIMPLEX VIRUS 83-104 PRECURSOR (TYPE 1/STRAIN PATTON) PVGLB_HSV23 GLYCOPROTEIN B HERPES SIMPLEX VIRUS 79-99 PRECURSOR (TYPE 2/STRAIN 333)/ PVGLB_HSV2H GLYCOPROTEIN B HERPES SIMPLEX VIRUS 79-99 PRECURSOR (TYPE 2/STRAIN HG52) PVGLB_HSV2S GLYCOPROTEIN B HERPES SIMPLEX VIRUS 65-85 PRECURSOR (TYPE 2/STRAIN 58A) PVGLB_HSV6U GLYCOPROTEIN B HERPES SIMPLEX VIRUS 72-92 117-144 (FRAGMENT) (TYPE 6/STRAIN UGANDA-1102) PVGLB_HSVB1 GLYCOPROTEIN 1 BOVINE HERPESVIRUS TYPE 1 560-578 689-707 PRECURSOR PVGLB_HSVB2 GLYCOPROTEIN B-1 BOVINE HERPESVIRUS TYPE 2 279-299 745-767 PRECURSOR (STRAIN BMV) (BOVINE MAMMILLITIS PVGLB_HSVBC GLYCOPROTEIN 1 BOVINE HERPESVIRUS TYPE 1 692-710 PRECURSOR (STRAIN COOPER) PVG;B_HSVE1 GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 736-753 PRECURSOR (ISOLATE HVS25A) (EHV-1) PVGLB_HSVE4 GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 675-692 PRECURSOR (STRAIN AB1) PVGLB_HSVEA GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 736-753 PRECURSOR (STRAIN AB1) PVGLB_HSVEB GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 736-753 PRECURSOR (STRAIN AB4P) PVGLB_HSVEL GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 736-753 PRECURSOR (STRAIN KENTUCKY D) PVGLB_HSVMD GLYCOPROTEIN B MAREK'S DISEASE HERPESVIRUS 589-613 PRECURSOR (STRAIN RB-1B) PVGLB_HSVSA GLYCOPROTEIN B HERPESVIRUS SAIMIRI 483-506 584-602 701-716 PRECURSOR (STRAIN 11) PVGLB_ILTV6 GLYCOPROTEIN B INFECTIOUS LARYNGOTRACHEI- 256-275 597-621 740-758 PRECURSOR TIS VIRUS (STRAIN 632) PVGLB_ILTIVS GLYCOPROTEIN B INFECTIOUS LARYNGOTRACHEI- 266-285 607-631 750-768 PRECURSOR TIS VIRUS (STRAIN SA-2) PVGLB_ILTVT GLYCOPROTEIN B INFECTIOUS LARYNGOTRACHEI- 266-285 607-631 750-768 PRECURSOR TIS VIRUS (STRAIN THRONE V882) PVGLB_MCMVS GLYCOPROTEIN B MURINE CYTOMEGALOVIRUS 135-156 566-589 738-765 PRECURSOR (STRAIN SMITH) PVGLB_PRVIF GLYCOPROTEIN GII PSEUDORABIES VIRUS (STRAIN 203-218 PRECURSOR INDIANA-FUNKHAUSER/BECKER) PVGLB_VZVD GLYCOPROTEIN B VARICELLA-ZOSTER VIRUS 522-538 PRECURSOR (STRAIN DUMAS) PVGLC_HSV11 GLYCOPROTEIN C HERPES SIMPLEX VIRUS 3-22 467-493 PRECURSOR (TYPE 1/STRAIN 17) PVGLC_HSV1K GLYCOPROTEIN C HERPES SIMPLEX VIRUS 3-22 467-493 PRECURSOR (TYPE 1/STRAIN 17) PVGLV_HSV2 GLYCOPROTEIN C HERPES SIMPLEX VIRUS 435-458 PRECURSOR (TYPE 2) PVGLC_HSV23 GLYCOPROTEIN C HERPES SIMPLEX VIRUS 436-459 PRECURSOR (TYPE 2/STRAIN 333) PVGLC_HSVBC GLYCOPROTEIN GIII BOVINE HERPESVIRUS TYPE 1 475-494 PRECURSOR (STRAIN COOPER) PVGLC_HSVE4 GLYCOPROTEIN C EQUINE HERPESVIRUS TYPE 4 444-459 PRECURSOR (STRAIN 1942) PVGLC_HSVEB GLYCOPROTEIN C EQUINE HERPESVIRUS TYPE 1 427-442 PRECURSOR (STRAIN AB4P) AND (STRAIN KENTUCKY) PVGLC_HSVMB SECRETORY GLYCOPROTEIN MAREK'S DISEASE HERPESVIRUS 399-421 GP57-65 PRECURSOR (STRAIN BC-1) PVGLC_HSVMD SECRETORY GLYCOPROTEIN MAREK'S DISEASE HERPESVIRUS 399-421 GP57-65 PRECURSOR (STRAIN RB-1B) PVGLC_HSVMG SECRETORY GLYCOPROTEIN MAREK'S DISEASE HERPESVIRUS 398-420 GP57-65 PRECURSOR (STRAIN GA) PVGLC_HSVMM SECRETORY GLYCOPROTEIN MAREK'S DISEASE HERPESVIRUS 399-421 GP57-65 PRECURSOR (STRAIN MD5) PVGLC_PRVIF GLYCOPROTEIN GIII PSEUDORABIES VIRUS (STRAIN 180-197 446-472 PRECURSOR INDIANA-FUNKHAUSER/BECKER) PVGLC_VZVD GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 431-449 (STRAIN DUMAS) PVGLC_VZVS GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 431-449 (STRAIN SCOTT) PCGLD_HSV11 GLYCOPROTEIN D HERPES SIMPLEX VIRUS 79-94 PRECURSOR (TYPE 1/STRAIN 17), AND (TYPE 1/STRAIN PVGLD_HSV2 GLYCOPROTEIN D HERPES SIMPLEX VIRUS 79-94 PRECURSOR (TYPE 2) PVGLE_HSV11 GLYCOPROTEIN E HERPES SIMPLEX VIRUS 104-129 413-437 PRECURSOR (TYPE 1/STRAIN 17) PVGLE_VZVD GLYCOPROTEIN E VARICELLA-ZOSTER VIRUS 469-493 PRECURSOR (STRAIN DUMAS) PFGLF_BRSVA FUSION GLYCOPROTEIN BOVINE RESPIRATORY 205-221 265-287 482-504 PRECURSOR SYNCYTIAL VIRUS (STRAIN A51908) PVGLF_BRSVC FUSION GLYCOPROTEIN BOVINE RESPIRATORY 205-221 265-280 284-506 PRECURSOR SYNCYTIAL VIRUS (STRAIN COPENHAGEN) PVGLF_BRSVR FUSION GLYCOPROTEIN BOVINE RESPIRATORY 205-221 265-280 484-506 PRECURSOR SYNCYTIAL VIRUS (STRAIN RB94) PVGLF_CDVO FUSION GLYCOPROTEIN CANINE DISTEMPER VIRUS 336-361 398-414 562-589 PRECURSOR (STRAIN ONDERSTEPOORT) PVGLF_HRSV1 FUSION GLYCOPROTEIN HUMAN RESPIRATORY 205-221 265-280 484-506 PRECURSOR SYNCYTIAL VIRUS (SUBGROUP B/ STRAIN 185 PVGLF_HRSVA FUSION GLYCOPROTEIN HUMAN RESPIRATORY 205-221 265-280 484-506 PRECURSOR SYNCYTIAL VIRUS (STRAIN A2) PVGLF_HRSVL FUSION GLYCOPROTEIN HUMAN RESPIRATORY 205-221 265-280 484-506 PRECURSOR SYNCYTIAL VIRUS (SUBGROUP A/ STRAIN LO PVGLF_HRSVR FUSION GLYCOPROTEIN HUMAN RESPIRATORY 205-221 265-280 484-506 PRECURSOR SYNCYTIAL VIRUS (STRAIN RSS-2) PVGLF_MEASE FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN 224-245 286-302 451-477 PRECURSOR EDMONSTON) and (STRAIN HALLE) PVGLF_MEAS1 FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN IP-3-CA) 227-248 289-305 454-480 PRECURSOR PVGLF_MEASY FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN 224-245 286-302 451-477 PRECURSOR YAMAGATA-1) PVGLF_MUMP1 FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN SBL-1) 5-20 276-292 446-467 PRECURSOR PVGLF_MUMPM FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN 276-292 446-467 PRECURSOR MIYAHARA VACCINE) PVGLF_MUMPR FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN RW) 276-292 446-467 PRECURSOR PVGLF_MUMPS FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN SBL) 5-20 276-292 446-467 PRECURSOR PVGLF_NDVA FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN AUSTRALIA- VICTORIA/32) PVGLF_NDVB FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN BEAUDETTE C/45) PVGLF_NDVH3 FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN HER/33) PVGLF_NDVH4 FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN B1-HITCHNER/47) PVGLF_NDVL FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN LAS/46) PVGLF_NDVM FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN MIYADERA/51) PVGLF_NDVQ FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN QUEENSLAND/66) PVGLF_NDVT FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN TEXAS) PVGLF_NDVTG FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN TEXAS G B/48) PVGLF_NDVU FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN ULSTER/67) PVGLF_PHODV FUSION GLYCOPROTEIN PHOCINE DISTEMPER VIRUS 269-285 305-326 367-383 531-558 PRECURSOR PVGLF_P11HC FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 1 VIRUS 456-477 PRECURSOR (STRAIN C39) PVGLF_P12H FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 450-471 PRECURSOR (PIV-2) PVGLF_P12HG FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 450-471 PRECURSOR (STRAIN GREER) PVGLF_P12HT FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 450-471 PRECURSOR (STRAIN TOSHIBA) PVGLF_P13B FUSION GLYCOPROTEIN BOVINE PARAINFLUENZA 3 VIRUS 405-426 453-474 PRECURSOR PVGLF_P13H4 FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 3 VIRUS 2-20 283-310 453-474 PRECURSOR (STRAIN N1H 47885) PVGLF_RINDK FUSION GLYCOPROTEIN RINDERPEST VIRUS (STRAIN 220-241 282-298 447-473 PRECURSOR KABETE O) PVGLF_RINDL FUSION GLYCOPROTEIN RINDERPEST VIRUS (STRAIN L) 220-241 282-298 447-473 PRECURSOR PVGLF_SEND5 FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z/ 460-481 PRECURSOR HOST MUTANTS) PVGLF_SENDF FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN FUSHIMI) 460-481 PRECURSOR PVGLF_SENDH FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN HARRIS) 460-481 PRECURSOR PVGLF_SENDJ FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN HVJ) 460-481 PRECURSOR PVGLF_SENDZ FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z) 460-481 PRECURSOR PCGLF_SV41 FUSION GLYCOPROTEIN SIMIAN VIRUS 41 453-474 PRECURSOR PVGLF_SV5 FUSION GLYCOPROTEIN SIMIAN VIRUS 5 (STRAIN W3) 401-425 446-467 PRECURSOR PVGLF_TRTV FUSION GLYCOPROTEIN TURKEY RHINOTRACHEITIS 175-191 452-474 PRECURSOR VIRUS PVGLG_INHV SPIKE GLYCOPROTEIN INFECTIOUS HEMATOPOIETIC 77-99 PRECURSOR NECROSIS VIRUS (STRAIN ROUND BUT PVGLG_RABVE SPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN ERA) 454-474 PRECURSOR PVGLG_RABVH SPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN 372-391 454-474 PRECURSOR HEP-FLURY) PVGLG_RABVP SPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN PV) 454-474 PRECURSOR PVGLG_RABVS SPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN SAD B19) 454-474 PRECURSOR PVGLG_RABVT SPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN STREET) 454-474 PRECURSOR PVGLG_TRTV MAJOR SURFACE TURKEY RHINOTRACHEITIS 199-216 GLYCOPROTEIN G VIRUS PVGLG_VHSV0 SPIKE GLYCOPROTEIN VIRAL HEMORRHAGIC 406-428 PRECURSOR SEPTICEMIA VIRUS (STRAIN 07-71) PVGLH_HCMVA GLYCOPROTEIN H HUMAN CYTOMEGALOVIRUS 211-237 365-382 574-598 691-712 PRECURSOR (STRAIN AD169) PVGLH_HCMVT GLYCOPROTEIN H HUMAN CYTOMEGALOVIRUS 210-236 364-381 573-597 690-711 PRECURSOR (STRAIN TOWNE) PVGLH_HSV11 GLYCOPROTEIN H HERPES SIMPLEX VIRUS 245-262 443-467 803-827 PRECURSOR (TYPE 1/STRAIN 17) PVGLH_HSV1E GLYCOPROTEIN H HERPES SIMPLEX VIRUS 245-262 443-467 803-827 PRECURSOR (TYPE 1/STRAIN HFEM) PVGLH_HSV6G GLYCOPROTEIN H HERPES SIMPLEX VIRUS 314-332 PRECURSOR (TYPE 6/STRAIN GS) PVGLH_HSVE4 GLYCOPROTEIN H EQUINE HERPESVIRUS TYPE 4 304-325 814-839 PRECURSOR (STRAIN 1942) PVGLH_HSVEB GLYCOPROTEIN H EQUINE HERPESVIRUS TYPE 1 297-318 807-832 PRECURSOR (STRAIN AB4P) and (ISOLATE HVS25A) PVGLH_HSVSA GLYCOPROTEIN H HERPESVIRUS SAIMIRI 454-479 658-679 PRECURSOR (STRAIN 11) PVGLH_MCMVS GLYCOPROTEIN H MURINE CYTOMEGALOVIRUS 670-690 PRECURSOR (STRAIN SMITH) PVGL1_HCMVA IE GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS 158-180 PRECURSOR (STRAIN AD169) PVGLI_HSV11 GLYCOPROTEIN I HERPES SIMPLEX VIRUS 43-60 (TYPE 1/STRAIN 17) PVGLI_HSVEB GLYCOPROTEIN I EQUINE HERPESVIRUS TYPE 1 44-63 PRECURSOR PVGLI_VZVD GLYCOPROTEIN I VARICELLA-ZOSTER VIRUS 278-297 (STRAIN DUMAS) PVGLM-BUNGE M POLYPROTEIN BUNYAVIRUS GERMISTON 117-136 197-222 PRECURSOR PVGLM_BUNL7 M POLYPROTEIN BUNYAVIRUS LA CROSSE 31-55 81-98 190-211 1325-1345 1387-1410 PRECURSOR (ISOLATE L74) PVGLM_BUNSH M POLYPROTEIN BUNYAVIRUS SNOWSHOE HARE 31-55 81-98 190-211 1325-1345 1387-1410 PRECURSOR PVGLM_BUNYW M POLYPROTEIN BUNYAMWERA VIRUS 193-218 1379-1404 PRECURSOR PVGLM_DUGBV M POLYPROTEIN DUGBE VIRUS PRECURSOR PVGLM_HANTB M POLYPROTEIN HANTAAN VIRUS (STRAIN B-1) 355-371 692-717 900-915 999-1019 PRECURSOR PVGLM_HANTH M POLYPROTEIN HANTAAN VIRUS (STRAIN HOJO) 499-515 694-718 1000-1020 PRECURSOR PVGLM_HANTL M POLYPROTEIN HANTAAN VIRUS (STRAIN LEE) 499-515 694-719 1001-1021 PRECURSOR PVGLM_HANTV M POLYPROTEIN HANTAAN VIRUS (STRAIN 76-118) 499-515 694-719 1001-1021 PRECURSOR PVGLM_INSV M POLYPROTEIN IMPATIENS NECROTIC SPOT 18-44 269-293 348-367 531-551 815-841 PRECURSOR VIRUS (INSV) PVGLM_PHV M POLYPROTEIN PROSPECT HILL VIRUS 152-171 PRECURSOR PVGLM_PTPV M POLYPROTEIN PUNTA TORO PHLEBOVIRUS 743-765 997-1016 1275-1302 PRECURSOR PVGLM_PUUMH M POLYPROTEIN PUUMALA VIRUS (STRAIN 155-174 509-525 712-729 PRECURSOR HALLNAS B1) PVGLM_PUUMS M POLYPROTEIN PUUMALA VIRUS (STRAIN 155-174 509-525 712-729 1092-1117 PRECURSOR SOTKAMO) PVGLM_RVRF M POLYPROTEIN RIFT VALLEY FEVER VIRUS 53-80 344-368 830-856 PRECURSOR PVGLM_RVFVZ M POLYPROTEIN RIFT VALLEY FEVER VIRUS 53-80 344-368 830-856 1156-1176 PRECURSOR (STRAIN ZH-548-M12) PVGLM_SEOU8 M POLYPROTEIN SEOUL VIRUS (STRAIN 80-39) 355-371 692-717 900-915 999-1019 PRECURSOR PVGLM_SEOUR M POLYPROTEIN SEOUL VIRUS (STRAIN R22) 355-371 693-718 901-916 1000-1020 PRECURSOR PVGLM_SEOUS M POLYPROTEIN SEOUL VIRUS (STRAIN ST-11) 355-371 692-717 900-915 999-1019 PRECURSOR (SAPPORO RAT VIRUS) PVGLM_UUK M POLYPROTEIN UUKUNIEMI VIRUS 561-585 655-674 826-842 925-952 966-989 PRECURSOR PVGLP_EVB PEPLOMER GLYCOPROTEIN BERNE VIRUS 430-452 869-885 1099-1124 1546-1568 PRECURSOR PVGLX_HSVEB GLYCOPROTEIN X EQUINE HERPESVIRUS TYPE 1 PRECURSOR (STRAIN AB4P) PVGLX_HSVEK GLYCOPROTEIN GX EQUINE HERPESVIRUS TYPE 1 PRECURSOR (STRAIN KENTUCKY A) PVGLX_HSVEL GLYCOPROTEIN GX EQUINE HERPESVIRUS TYPE 1 (STRAIN KENTUCKY D) PVGLX_PRVR1 SECRETED GLYCOPROTEIN PESUDORABIES VIRUS 149-176 GX (STRAIN RICE) PVGLY_JUNIN GLYCOPROTEIN JUNIN AREANVIRUS 12-38 POLYPROTEIN PRECURSOR PVGLY_LASSG GLYCOPROTEIN LASSA VIRUS (STRAIN GA39) 12-38 237-259 426-448 POLYPROTEIN PRECURSOR PVGLY_LASSJ GLYCOPROTEIN LASSA VIRUS (STRAIN JOSIAH) 12-35 238-259 427-449 POLYPROTEIN PRECURSOR PVGLY_LYCVA GLYCOPROTEIN LYMPHOCYTIC 12-35 POLYPROTEIN PRECURSOR CHORIOMENINGITIS VIRUS (STRAIN ARMSTRONG) PVGLY_LYCVW GLYCOPROTEIN LYMPHOCYTIC 12-35 89-108 POLYPROTEIN PRECURSOR CHORIOMENINGITIS VIRUS (STRAIN WE) PVGLY_MOPE1 GLYCOPROTEIN MOPIEA VIRUS 12-35 425-447 POLYPROTEIN PRECURSOR PVGLY_PIARV GLYCOPROTEIN PICHINDE ARENA VIRUS 12-38 441-466 POLYPROTEIN PRECURSOR PVGLY_TACV GLYCOPROTEIN TACARIBE VIRUS 12-38 POLYPROTEIN PRECURSOR PVGLY_TACV5 GLYCOPROTEIN TACARIBE VIRUS (STRAIN V5) 12-38 POLYPROTEIN PRECURSOR PVGLY_TACV7 GLYCOPROTEIN TACARIBE VIRUS (STRAIN V7) 12-38 POLYPROTEIN PRECURSOR PVGLY_TACVT GLYCOPROTEIN TACARIBE VIRUS (STRAIN TRVL 12-38 POLYPROTEIN PRECURSOR 11598) PVGNB_CPMV GENOME POLYPROTEIN B COWPEA MOSAIC VIRUS 141-161 569-594 757-783 1110-1135 1165-1184 PVGNM_CPMV GENOME POLYPROTEIN M COWPEA MOSAIC VIRUS 311-335 741-764 PVGP2_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 657-681 ANTIGEN GP220 B95-8) (HUMAN HERPESVIRUS 4) PVGP3_EBV ENVELOPE EPSTEIN-BARR VIRUS (STRAIN 854-878 GLYCOPROTEIN GP340 B95-8) (HUMAN HERPESVIRUS 4) PVGP8_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 67-88 ANTIGEN GP85 B95-8) (HUMAN HERPESVIRUS 4) PVGP_EBOV STRUCTURAL EBOLA VIRUS 34-52 537-561 653-675 GLYCOPROTEIN PRECURSOR PVGP_MABVM STRUCTURAL MARBURG VIRUS (STRAIN 538-562 607-627 GLYCOPROTEIN PRECURSOR MUSOKE) PVGP_MABVP STRUCTURAL MARBURG VIRUS (STRAIN POPP) 538-562 607-627 GLYCOPROTEIN PRECURSOR PVH01_VACCC PROTEIN-TYROSINE VACCINIA VIRUS (STRAIN 76-92 105-121 PHOSPHATASE COPENHAGEN) PVH01_VACCV PROTEIN-TYROSINE VACCINIA VIRUS (STRAIN WR) 76-92 105-121 PHOSPHATASE PVHO1_VARV PROTEIN-TYROSINE VARIOLA VIRUS 76-92 105-121 PHOSPHATASE PVH07_VACCV LATE PROTEIN H7 VACCINIA VIRUS (STRAIN WR) 70-97 PVH07_VARV LATE PROTEIN H7 VARIOLA VIRUS 70-97 PVHEL_FXMV PROBABLE HELICASE FOXTAIL MOSAIC VIRUS 182-205 PVHEL_PMV PROBABLE HELICASE PAPAYA MOSAIC POTEXVIRUS 153-168 PV101_VACCC PROTEIN I1 VACCINIA VIRUS (STRAIN 120-135 COPENHAGEN) PV101_VARV PROTEIN I1 VARIOLA VIRUS 120-135 PV103_VACCC PROTEIN I3 VACCINIA VIRUS (STRAIN 194-220 COPENHAGEN) PV103_VACCV PROTEIN I3 VACCINIA VIRUS (STRAIN WR) 194-220 PV103_VARV PROTEIN I3 VARIOLA VIRUS 194-220 PV106_VACCV PROTEIN I6 VACCINIA VIRUS (STRAIN WR) 106-128 133-155 PV106_VARV PROTEIN I6 VARIOLA VIRUS 106-128 133-155 PV107_VACCC PROTIEN I7 VACCINIA VIRUS (STRAIN 13-34 344-367 COPENHAGEN) PV107_VACCV PROTEIN I7 VACCINIA VIRUS (STRAIN WR) 13-34 344-367 PV107_VARV PROTEIN I7 VARIOLA VIRUS 13-34 344-367 PV108_VACCC PUTATIVE RNA VACCINIA VIRUS (STRAIN 196-212 418-438 HELICASE 18 COPENHAGEN) PV108_VACCV PUTATIVE RNA VACCINIA VIRUS (STRAIN WR) 196-212 418-438 HELICASE 18 PV108_VARV PUTATIVE RNA VARIOLA VIRUS 196-212 418-438 HELICASE 18 PVIE1_HCMVA 55 KD IMMEDIATE-EARLY HUMAN CYTOMEGALOVIRUS 77-100 333-350 PROTEIN 1 (STRAIN AD169) PVIE1_HCMVT 55 KD IMMEDIATE-EARLY HUMAN CYTOMEGALOVIRUS 77-100 333-350 PROTEIN 1 (STRAIN TOWNE) PVIE2_HCMVA 45 KD IMMEDIATE-EARLY HUMAN CYTOMEGALOVIRUS 14-32 389-406 PROTEIN 2 (STRAIN AD169) PVIE2_HCMVT 45 KD IMMEDIATE-EARLY HUMAN CYTOMEGALOVIRUS 14-32 388-405 PROTEIN 2 (STRAIN TOWNE) PVIE2_MCMVS IMMEDIATE-EARLY MUTINE CYTOMEGALOVIRUS 251-272 PROTEIN 2 (STRAIN SMITH) PVIE3_HCMVT 30 KD IMMEDIATE-EARLY HUMAN CYTOMEGALOVIRUS 14-32 PROTEIN 2 (STRAIN TOWNE) PVIEG_HSVSA IMMEDIATE-EARLY HERPESVIRUS SAIMIRI 65-80 PROTEIN IE-G (STRAIN 11) PVIEN_NPVAC IMMEDIATE-EARLY REG AUTOGRAPHA CALIFORNICA 100-116 273-290 PROTEIN 1E-N NUCLEAR POLYHEDROSIS VIRUS PVIMP_EBV PROB INTEGRAL MEMBRANE EPSTEIN-BARR VIRUS 75-100 125-152 203-222 PROTEIN BBRF3 (STRAIN B95-8) PVIMP_HCMVA PROBABLE INTEGRAL HUMAN CYTOMEGALOVIRUS 68-89 190-217 MEMBRANE PROTEIN (STRAIN AD169) PVIMP_HSV11 PROBABLE INTEGRAL HERPES SIMPLEX VIRUS 83-110 250-270 MEMBRANE PROTEIN (TYPE 1/STRAIN 17) PVIMP_HSVEB PROBABLE INTEGRAL EQUINE HERPESVIRUS TYPE 1 24-49 93-120 145-172 247-263 301-321 332-358 MEMBRANE PROTEIN (STRAIN AB4P) PVIMP_HSVSA INTEGRAL MEMBRANE HERPESVIRUS SAIMIRI 76-101 313-331 PROTEIN (STRAIN 11) PVIMP_VZVD PROBABLE INTEGRAL VARICELLA-ZOSTER VIRUS 21-47 154-181 230-252 MEMBRANE PROTEIN (STRAIN DUMAS) PVJ01_VACCC PROTEIN J1 VACCINIA VIRUS (STRAIN 89-110 COPENHAGEN) PVJ01_VACCV PROTEIN J1 VACCINIA VIRUS (STRAIN WR) 89-110 PVJ01_VARV PROTEIN J1 VARIOLA VIRUS 89-110 PVK04_VACCC PROTEIN K4 VACCINIA VIRUS (STRAIN 87-113 208-234 319-337 COPENHAGEN) PVK04_VACCV PROTEIN K4 VACCINIA VIRUS (STRAIN WR) 87-113 208-234 319-337 PVK05_VACCC PROTEIN K5 VACCINIA VIRUS (STRAIN 106-133 COPENHAGEN) PVL02_VACCC PROTEIN L2 VACCINIA VIRUS (STRAIN 39-61 COPENHAGEN) PVL02_VACCV PROTEIN L2 VACCINIA VIRUS (STRAIN WR) 39-61 PVL02_VARV PROTEIN L2 VARIOLA VIRUS 39-61 PVL03_VACCC PROTEIN L3 VACCINIA VIRUS (STRAIN 148-164 186-208 292-315 COPENHAGEN) PVL03_VACCV PROTEIN L3 VACCINIA VIRUS (STRAIN WR) 148-164 186-208 292-315 PVL03_VARV PROTEIN L3 VARIOLA VIRUS 147-163 / 185-207 291-314 PVL05_VACCV PROTEIN L5 VACCINIA VIRUS (STRAIN WR), 16-39 AND (STRAIN COPENHAGEN) PVL05_VARV PROTEIN L5 VARIOLA VIRUS 16-39 PVL1_CRPVK PROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) 299-317 PAPILLOMAVIRUS (STRAIN KANSAS) PVL1_HPV18 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS 28-55 TYPE 18 PVL1_HPV41 PROBABLE L1 PROTEIN HUMAM PAPILLOMAVIRUS 38-63 TYPE 41 PVL1_REOVD MAJOR CORE PROTEIN REOVIRUS (TYPE 3/STRAIN 327-346 351-366 752-774 LAMBDA 1 DEARING) PVL2_HPV08 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 254-270 TYPE 8 PVL2_HPV11 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 32-58 TYPE 11 PVL2_HPV13 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 TYPE 13 PVL2_HPV16 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 34-60 TYPE 16 PVL2_HPV18 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 TYPE 18 PVL2_HPV1A PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 213-228 TYPE 1A PVL2_HSV2A PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 88-114 TYPE 2A PVL2_HPV31 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 34-60 443-462 TYPE 31 PVL2_HPV33 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 99-114 TYPE 33 PVL2_HPV35 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 34-60 TYPE 35 PVL2_HPV41 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 39-58 414-436 TYPE 41 PVL2_HPV42 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 344-370 TYPE 42 PVL2_HPV47 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 250-265 TYPE 47 PVL2_HPV57 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 32-58 TYPE 57 PVL2_HPV58 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 99-114 TYPE 58 PVL2_HPV6B PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 TYPE 6B PVL2_PAPVE PROBABLE L2 PROTEIN EUROPEAN ELK 30-56 PAPILLOMAVIRUS PVL2_RHPV1 PROBABLE L2 PROTEIN RHESUS PAPILLOMAVIRUS 45-71 TYPE 1 PVL3_HPV5B PROBABLE L3 PROTEIN HUMAN PAPILLOMAVIRUS 6-28 TYPE 5B PVL3_REOVD MINOR CORE PROTEIN REOVIRUS (TYPE 3/STRAIN 714-737 LAMBDA 3 DEARING PVL3_REOVJ MINOR CORE PROTEIN REOVIRUS (TYPE 2/STRAIN 714-737 1213-1236 LAMBDA 3 D5/JONES) PVL3_REOVL MINOR CORE PROTEIN REOVIRUS (TYPE 1/STRAIN LANG) 714-737 LAMBDA 3 PVL96_IRV1 L96 PROTEIN TIPULA IRIDESCENT VIRUS (TIV) 144-170 196-220 686-711 845-861 (INSECT IRIDESCENT VIRUS TYPE 1) PVM01_VACCC PROTEIN M1 VACCINIA VIRUS (STRAIN 134-159 177-195 281-302 COPENHAGEN) PVM01_VACCV PROTEIN M1 VACCINIA VIRUS (STRAIN WR) 83-108 126-144 230-251 PVM01_VARV PROTEIN M1 VARIOLA VIRUS 81-106 124-142 228-249 PVM1_REOVD MINOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN 141-168 227-245 280-304 324-347 414-436 454-477 PROTEIN MU-2 DEARING) PVM1_REOVL MINOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 141-168 227-245 280-304 414-436 454-477 PROTEIN MU-2 PVM21_REOVD MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN 168-192 PROTEIN MU-1/MU-1C DEARING) PVM22_REOVD MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN 168-192 PROTEIN MU-1/MU-1C DEARING) PVM2_REOVJ MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 2/STRAIN 168-192 PROTEIN MU-1/MU-1C D5/JONES) PVM2_REOVL MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN 168-192 PROTEIN MU-1/MU-1C LANG) PVM3_REOVD MAJOR NONSTRUCTURAL REOVIRUS (TYPE 3/STRAIN 304-326 521-540 PROTEIN MU-NS DEARING) PVMAT_BRSVA MATRIX PROTEIN BOVINE RESPIRATORY 37-62 SYNCYTIAL VIRUS (STRAIN A51908) PVMAT_CDVO MATRIX PROTEIN CANINE DISTEMPER VIRUS 148-165 283-309 (STRAIN ONDERSTEPOORT) PVMAT_HRSVA MATRIX PROTEIN HUMAN RESPIRATORY 44-62 139-160 SYNCYTIAL VIRUS (STRAIN A2) PVMAT_LPMV MATRIX PROTEIN LA PIEDAD-MICHOACAN-MEXICO 311-338 VIRUS PVMAT_MEASE MATRIX PROTEIN MEASLES VIRUS (STRAIN 283-309 EDMONSTON) PVMAT_MEASH MATRIX PROTEIN MEASLES VIRUS (STRAIN 283-309 HALLE) PVMAT_MEASI MATRIX PROTEIN MEASLES VIRUS (STRAIN 87-111 IP-3-CA) PVMAT_MEASU MATRIX PROTEIN MEASLES VIRUS (STRAIN HU2) 283-309 PVMAT_MUMP1 MATRIX PROTEIN MUMPS VIRUS (STRAIN SBL-1) 191-207 227-250 310-330 PVMAT_MUMPS MATRIX PROTEIN MUMPS VIRUS (STRAIN SBL) 191-207 227-250 310-330 PVMAT_NDVA MATRIX PROTEIN NEWCASTLE DIESEASE VIRUS 135-151 190-208 309-329 (STRAIN AUSTRAULIA- VICTORIA/32) PVMAT_NDVB MATRIX PROTEIN NEWCASTLE DIESEASE VIRUS 135-151 190-208 309-329 (STRAIN BEAUDETTE C/45) PVMAT_PIIHC MATRIX PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 195-217 (STRAIN C39) PVMAT_P12HT MATRIX PROTEIN HUMAN PARAINFLUENZA 2 VIRUS 132-154 189-205 308-328 (STRAIN TOSHIBA) (PIV-2) PVMAT_P14HA MATRIX PROTEIN HUMAN PARAINFLUENZA 4A 312-332 VIRUS (STRAIN TOSHIBA) (PIV-4A) PVMAT_P14HB MATRIX PROTEIN HUMAN PARAINFLUENZA 4B 312-332 VIRUS (STRAIN 68-333) (PIV-4B) PVMAT_RINDK MATRIX PROTEIN RINDERPEST VIRUS (STRAIN 200-221 239-260 283-309 KABETE O) PVMAT_SENDF MATRIX PROTEIN SENDAI VIRUS (STRAIN FUSHIMI) 195-217 PVMAT_SENDH MATRIX PROTEIN SENDAI VIRUS (STRAIN HARRIS) 195-217 PVMAT_SENDZ MATRIX PROTEIN SENDAI VIRUS (STRAIN Z) 195-217 PVMAT_SSPVB MATRIX PROTEIN SUBACUTE SCLEROSING 283-309 314-338 PANENCEPHALITIS VIRUS (STRAIN BIKEN) PVMAT_SV41 MATRIX PROTEIN SIMINA VIRUS 41 132-154 189-205 308-328 PVMAT_SV5 MATRIX PROTEIN SIMIAN VIRUS 5 (STRAIN W3) 98-114 132-148 308-335 PVMAT_SVCV MATRIX PROTEIN SPRING VIREMIA OF CARP VIRUS 141-167 (RHABDOVIRUS CARPIA) PVMAT_TRTV MATRIX PROTEIN TURKEY RHINOTRACHEITIS 122-143 VIRUS PVME1_CVBM E1 GLYCOPROTEIN BOVINE CORONAVIRUS 9-36 137-161 171-190 (STRAIN MEBUS) PVME1_CVH22 E1 GLYCOPROTEIN HUMAN CORONAVIRUS 136-155 (STRAIN 229E) PVME1_CVHOC E1 GLYCOPROTEIN HUMAN CORONAVIRUS 9-36 64-85 137-161 (STRAIN OC43) PVME1_CVMA5 E1 GLYCOPROTEIN MURINE COROANVIRUS MHV 10-37 (STRAIN A59) PVEM1-CVMJH E1 GLYCOPROTEIN MURINE COROANVIRUS MHV 10-37 (STRAIN JHM) PVME1_CVPFS E1 GLYCOPROTEIN PORCINE TRANSMISSIBLE 174-193 PRECURSOR GASTROENTERITIS CORONA- VIRUS (STRAIN PVME1_CVPPU E1 GLYCOPROTEIN PORCINE TRANSMISSIBLE 169-193 174-193 PRECURSOR GASTROENTERITIS CORONA- VIRUS (STRAIN PVME1_CVPRM E1 GLYCOPROTEIN PORCINE RESPIRATORY 174-193 PRECURSOR CORONAVIRUS (STRAIN RM4) PVME1_CVTKE E1 GLYCOPROTEIN TURKEY ENTERIC CORONAVIRUS 9-36 137-161 171-190 PVME1_IBV6 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 74-98 VIRUS (STRAIN 6/82) PVME1_IBVB E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 74-101 VIRUS (STRAIN BEAUDETTE) PVME1_IBVB2 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 74-101 VIRUS (STRAIN BEAUDETTE M42) PVME1_IBVK E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 74-98 VIRUS (STRAIN KB8523) PVMEM_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS 131-157 178-203 PROTEIN (STRAIN B95-8) PVMP_CAMVC MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 118-134 147-164 183-201 (STRAIN CM-1841) PVMP_CAMVD MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 118-134 147-164 183-201 (STRAIN D/H) PVMP_CAMVE MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 118-134 147-164 183-201 (STRAIN BBC) PVMP_CAMVN MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 118-134 147-164 183-201 (STRAIN NY8153) PVMP_CAMVS MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 118-134 147-164 183-201 (STRAIN STRASBOURG) PVMP_CAMVW MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 118-134 147-164 183-201 STRAIN W260) PVMP_CERV MOVEMENT PROTEIN CARNATION ETCHED RING VIRUS 293-318 PVMP_FMVD MOVEMENT PROTEIN FIGWORT MOSAIC VIRUS 115-131 180-198 (STRAIN DXS) PVMP_SOCMV MOVEMENT PROTEIN SOYBEAN CHLOROTIC MOTTLE 122-147 273-299 VIRUS PVMSA_HPBDB MAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS 201-228 269-295 PRECURSOR (BROWN SHANGHAI DUCK ISOLATE S5) PVMSA_HPBDC MAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS 194-221 268-294 PRECURSOR (STRAIN CHINA) PVMSA_HPBDU MAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS 157-184 231-257 PRECURSOR PVMSA_HPBDW MAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS 194-221 269-295 PRECURSOR (WHITE SHANGHAI DUCK ISOLATE S31) PVMSA_HPBGS MAJOR SURFACE ANTIGEN GROUND SQUIRREL HEPATITIS 209-236 271-295 380-395 PRECURSOR VIRUS PVMSA_HPBHE MAJOR SURFACE ANTIGEN HERON HEPATITIS B VIRUS 236-262 293-320 PRECURSOR PVMSA_HPBV0 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 11-28 70-96 PVMSA_HPBV2 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 185-202 244-270 PRECURSOR (SUBTYPE ADW2) PVMSA_HPBV4 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 185-202 244-270 PRECURSOR (SUBTYPE ADR4) PVMSA_HPBV9 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 244-270 PRECURSOR (SUBTYPE ADW/STRAIN 991) PVMSA_HPBVA MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 174-191 233-259 PRECURSOR (STRAIN ALPHA) PVMSA_HPBVD MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 11-28 70-96 (SUBTYPE AD) PVMSA_HPBV1 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 233-259 PRECURSOR (SUBTYPE ADW/STRAIN INDONESIA/PIDW420) PVMSA_HPBVJ MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 174-191 233-259 PRECURSOR (SUBTYPE ADW/STRAIN JAPAN/PJDW233) PVMSA_HPBVL MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 174-191 233-259 PRECURSOR (STRAIN LSH/CHIMPANZEE ISOLATE PVMSA_HPBVN MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 11-28 70-96 (SUBTYPE ADR/STRAIN NC-1) PVMSA_HPBVO MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 174-191 233-259 PRECURSOR (SUBTYPE ADW/STRAIN OKINAWA PODW282) PVMSA_HPBVP MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 185-202 244-270 PRECURSOR (SUBTYPE ADW/STRAIN PHILIPPINO/PFDW294) PVMSA_HPBVR MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 185-202 244-270 PRECURSOR (SUBTYPE ADR) PVMSA_HPBVS MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 11-28 70-96 (SUBTYPE AR) PVMSA_HPBVW MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 174-191 233-259 PRECURSOR (SUBTYPE ADW) PVMSA_HPBVY MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 174-191 233-259 PRECURSOR (SUBTYPE ADW) PVMSA_HPBVZ MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 174-191 233-259 PRECURSOR (SUBTYPE ADYW) PVMSA_WHV1 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 1 207-234 269-293 378-393 PRECURSOR PVMSA_WHV59 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS 212-239 274-298 383-398 PRECURSOR VIRUS 59 PVMSA_WHV7 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 7 212-239 274-398 383-398 PRECURSOR PVMSA_WHV8 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 8 212-239 274-298 383-398 PRECURSOR PVMSA_WHV81 PROB MAJOR SURFACE WOODCHUCK HEPATITIS VIRUS 8 212-239 274-298 383-398 ANTIGEN PREC (INFECTIOUS CLONE) PVMSA_WHVW6 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 125-149 234-249 PRECURSOR W64 (ISOLATE PWS23) PVMT2_IAANN MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/ANN ARBOR/6/60) PVMT2_IABAN MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/BANGKOK/1/79) PVMT2_IAFOW MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/FORT WARREN/1/50) PVMT2_IAFPR MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/FOWL PLAGUE VIRUS/ ROSTOCK/34) PVMT2_IAFPW MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/FOWL PLAGUE VIRUS/ WEYBRIDE) PVMT2_IALE1 MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/LENINGRAD/134/57) PVMT2_IALE2 MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/LENINGRAD/134/17/57) PVMT2_IAMAN MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/MALLARD/NEW YORK/6750/78) PVMT2_IAPUE MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/PUERTO RICO/8/34) PVMT2_IASIN MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/SINGAPORE/1/57) PVMT2_IAUDO MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/UDORN/307/72) PVMT2_IAWIL MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/WILSON-SMITH/33) PVMT9_MYXVL MT-9 PROTEIN MYXOMA VIRUS (STRAIN 226-241 LAUSANNE) PVN34_ROTBS NONSTRUCTURAL BOVINE ROTAVIRUS (GROUP C/ 334-351 PROTEIN NS34 STRAIN SHINTOKU) PVNBP_PVSP 10 7 KD PROTEIN POTATO VIRUS S (STRAIN 21-36 PERUVIAN) PVNB_INBBE NB GLYCOPROTEIN INFLUENZA B VIRUS 13-39 (STRAIN B/BEIJING/1/87) PVNB_INBHK NB GLYCOPROTEIN INFLUENZA B VIRUS 13-39 (STRAIN B/HONK KONG/8/73) PVNB_INBLE NB GLYCOPROTEIN INFLUENZA B VIRUS (STRAIN 13-39 B/LEE/40) PVNB_INBLN NB GLYCOPROTEIN INFLUENZA B VIRUS (STRAIN 13-39 B/LENINGRAD/179/86) PVNB_INBMD NB GLYCOPROTEIN INFLUENZA B VIRUS (STRAIN 13-39 B/MARYLAND/59) PVNB_INBMF NB GLYCOPROTEIN INFLUENZA B VIRUS (STRAIN 13-39 B/MEMPHIS/3/89) PVNB_INBOR NB GLYCOPROTEIN INFLUENZA B VIRUS (STRAIN 13-39 B/OREGON/5/80) PVNCS_ADVG NONCAPSID PROTEIN NS-1 ALEUTIAN MINK DISEASE 81-96 169-190 PAR VOVIRUS (STRAIN G) PVNCS_AEDEV NONCAPSID PROTEIN NS-1 AEDES DENSONUCLEOSIS VIRUS 675-690 (STRAIN GKV 002 002) (AEDES DENS PVNCS_PAVHB NONCAPSID PROTEIN NS-1 HUMAN PARVOVIRUS B19 575-597 PVNCS_PAVHH NONCAPSID PROTEIN NS-1 HAMSTER PARVOVIRUS H1 140-165 PVNS1_AHSV4 NONSTRUCTURAL PROTEIN AFRICAN HORSE SICKNESS 256-272 NS1 VIRUS (SEROTYPE 4/ STRAIN VACCINE) PVNS1_IAALA NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 114-137 167-192 NS1 A/ALASKA/6/77) PVNS1_IAANN NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 114-137 167-192 NS1 A/ANN ARBOR/6/60) PVNS1_IACAO NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 19-38 NS1 A/CAMEL/MONGOLIA/82) PVNS1_IACHI NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 114-137 167-192 NS1 A/CHILE/1/83) PVNS1_IACKG NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 167-192 NS1 A/CHICKEN/GERMANY/N/49) PVNS1_IACKJ NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 28-47 164-189 NS1 A/CHICKEN/JAPAN/24) PVNS1_IADA2 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 167-192 NS1 A/DUCK/ALBERTA/60/76) PVNS1_IADE1 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 28-47 164-189 NS1 A/DUCK/ENGLAND/1/56) PVNS1_IADU3 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 28-47 164-189 NS1 A/DUCK/UKRAINE/1/63) PVNS1_IAFOM NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 114-137 167-192 NS1 A/FORT MONMOUTH/1/47) PVNS1_IAFOW NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 114-137 167-192 NS1 A/FORT WARREN/1/50), AND (STRAIN A/ PVNS1_IAFPR NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 167-192 NS1 A/FOWL PLAGUE VIRUS/ ROSTOCK/34) PVNS1_IALE1 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 114-137 167-192 NS1 A/LENINGRAD/134/57) PVNS1_IALEN NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 114-137 167-192 NS1 A/LENINGRAD/54/71) PVNS1_IAMA6 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31-50 167-192 NS1 A/MALLARD/ALBERTA/88/76) PVNS1_IAMAN NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/MALLARD/NEW YORK/6750/78) PVNS1_IAMAO NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/MALLARD/NEW YORK/6874/78) PNVS1_IAMYN NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 28-47 164-189 NS1 (STRAIN A/MYNAH/HANEDA- THAI/76) PVNS1_IAP10 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 167-192 NS1 (STRAIN A/PINTAIL/ALBERTA/ 119/79) PVNS1_IAPI1 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/PINTAIL/ALBERTA/ 121/79) PVNS1_IAPI2 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/PINTAIL/ALBERTA/ 268/78) PVNS1_IAPI3 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/PINTAIL/ALBERTA/ 358/79) PVNS1_IAPUE NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 114-137 167-192 NS1 (STRAIN A/PUERTO RICO/8/34) PVNS1_IATKB NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/TURKEY/BETHLEHEM- GLILIT/1492-B PVNS1_IATKC NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/TURKEY/CANADA/63) PVNS1_IATKR NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 NS1 (STRAIN A/TURKEY/OREGON/71) PVNS1_IATRS NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 28-47 164-189 NS1 (STRAIN A/TERN/SOUTH AFRICA/61) PVNS1_IATRT NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/TERN/TURKMENIA/ 18/72) PVNS1_IAUDO NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 114-137 167-192 NS1 (STRAIN A/UDORN/307/72) PVNS1_IAUSS NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 114-137 167-192 NS1 (STRAIN A/USSR/90/77) PVNS1_IAZI1 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/SWINE/IOWA/15/30) PVNS1_INCAA NONSTRUCTURAL PROTEIN INFLUENZA C VIRUS 222-248 NS1 (STRAIN C/ANN ARBOR/1/50) PVNS1_INCCA NONSTRUCTURAL PROTEIN INFLUENZA C VIRUS 222-248 NS1 (STRAIN C/CALIFORNIA/78) PVNS2_BTV10 NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 145-161 201-223 NS2 10/ISOLATE USA) PVNS2_BTV17 NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 145-161 201-223 NS2 17/ISOLATE USA) PVNS2_(—BTV1S) NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 145-161 NS2 1/ISOLATE SOUTH AFRICA) PVNS2_BTV1X NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 145-161 NS2 10) PVNS2_EHDV2 NONSTRUCTURAL PROTEIN EPIZOOTIC HEMORRHAGIC 145-161 NS2 DISEASE VIRUS (SEROTYPE 2/ STRAIN AL PVNS2_IAPUE NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 3-28 NS2 (STRAIN A/PUERTO RICO/8/34) PVNS2_IATRS NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 56-80 NS2 (STRAIN A/TERN/SOUTH AFRICA/61) PVNS2_PVM NONSTRUCTURAL PROTEIN 2 PNEUMONIA VIRUS OF MICE 52-68 PVNS3_CVPFS NONSTRUCTURAL PROTEIN PORCINE TRANSMISSIBLE 177-201 3-1 GASTROENTERITIS CORONA- VIRUS (STRAIN PVNS3_CVPPU NONSTRUCTURAL PROTEIN PORCINE TRANSMISSIBLE 98-122 3-1 GASTROENTERITIS CORONAVIRUS (STRAIN PVNS3_CVPRM NONSTRUCTURAL PROTEIN PORCINE RESPIRATORY 177-201 3-1 CORONAVIRUS (STRAIN RM4) PVNS3_RSV NONSTRUCTURAL PROTEIN RICE STRIPE VIRUS 16-40 NS3 PVNS4_CVH22 NONSTRUCTURAL PROTEIN 4 HUMAN CORONAVIRUS 84-100 (STRAIN 229E) PVNS4_CVMS NONSTRUCTURAL PROTEIN 4 MURINE CORONAVIRUS MHV 17-38 (STRAIN S) PVNS4_CVPFS NONSTRUCTURAL PROTEIN 4 PORCINE TRANSMISSIBLE 4-31 GASTROENTERITIS CORNOA- VIRUS (STRAIN PVNS4_CVPPU NONSTRUCTURAL PROTEIN 4 PROCINE TRANSMISSIBLE 4-31 GASTROENTERITIS CORNOA- VIRUS (STRAIN PVNS4_CVPRM NONSTRUCTURAL PROTEIN 4 PORCINE REPSIRATORY 4-31 CORONAVIRUS (STRAIN RM4) PVNS4_MSTV NONSTRUCTURAL PROTEIN MAIZE STRIPE VIRUS 41-56 NS4 PVNS4_RSV NONSTRUCTURAL PROTEIN RICE STRIPE VIRUS 41-56 60-82 152-167 NS4 PVNS7_CVFE3 NONSTRUCTURAL PROTEIN 7 FELINE ENTERIC CORONAVIRUS 59-84 (STRAIN 79-1683) PVNS7_FIPV NONSTRUCTURAL PROTEIN 7 FELINE INFECTIOUS PERITONITIS 59-84 VIRUS (STRAIN 79-1146) PVNSC_PI1HB NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 76-92 (STRAIN C35) PVNSC_PI1HC NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 76-92 (STRAIN C39) PVNSC_PI1HD NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 76-92 179-197 (STRAIN CI-5/73) PVNSC_PI1HE NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 76-92 (STRAIN CI-14/83) PVNST_CVBQ 32 KD NONSTRUCTURAL BOVINE CORONAVIRUS (STRAIN 88-109 PROTEIN QUEBEC) PVNST_INCGL NONSTRUCTURAL PROTEIN INFLUENZA C VIRUS (STRAIN 222-248 NS1-NS2 C/GREAT LAKES/1167/54) PVNST_INCJH NONSTRUCTURAL PROTEIN INFLUENZA C VIRUS (STRAIN 222-248 NS1-NS2 C/JOHANNESBURG/1/66) PVNST_INCMI NONSTRUCTURAL PROTEIN INFLUENZA C VIRUS (STRAIN 222-248 NS1-NS2 C/MISSISSIPPI/80) PVNST_INCYA NONSTRUCTURAL PROTEIN INFLUENZA C VIRUS (STRAIN 222-248 NS1-NS2 C/YAMAGATA/10/81) PVNST_PTPV NONSTRUCTURAL PROTEIN PUNTA TORO PHLEBOVIRUS 48-63 NS-S PVNST_SFSV NONSTRUCTURAL PROTEIN SANDFLY FEVER SILICIAN 16-34 NS-S VIRUS PVNST_UUK NONSTRUCTURAL PROTEIN UUKUNIEMI VIRUS 52-73 89-104 NS-S PVNUA_PRVKA PROBABLE NUCLEAR PSEUDORABIES VIRUS 756-777 1563-1583 ANTIGEN (STRAIN KAPLAN) PVNUC_DHVII NUCLEOPROTEIN DHORI VIRUS (STRAIN 123-139 297-324 INDIAN/1313/61) PVNUC_EBOV NUCLEOPROTEIN EBOLA VIRUS 159-176 PVNUC_IAANA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 266-287 A/ANAS ACUTA/PRIMORJE/ 695/76) PVNUC_IAANN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/ANN ARBOR/6/60) PVNUC_IABRA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/BRAZIL/11/78) PVNUC_IABUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/BUDGERIGAR/HOKKAIDO/1/77) PVNUC_IACAL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/CALIFORNIA/10/78) PVNUC_IACKG NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/CHICKEN/GERMANY/N/49) PVNUC_IACKP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/CHICKEN/PENNSYLVANIA/1/83) PVNUC_IADAU NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/AUSTRALIA/749/80 PVNUC_IADBE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/BEIJING/1/78) PVNUC_IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/CZECHOSLOVAKIA/56) PVNUC_IADE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/ENGLAND/1/56) PVNUC_IADE2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/ENGLAND/1/62) PVNUC_IADHK NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/HONG KONG/7/75) PVNUC_IADM2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/MEMPHIS/928/74) PVNUC_IADMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/MANITOBA/1/53) PVNUC_IADNZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/NEW ZEALAND/31/76) PVNUC_IADU2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/UKRAINE/2/60) PVNUC_IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/ENGLAND/19/55) PVNUC_IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/FORT MONMOUTH/1/47) PVNUC_IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/FORT WARREN/1/50) PVNUC_IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/FOWL PLAGUE VIRUS/ DOBSON/DUTC PVNUC_IAFPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/FOWL PLAGUE VIRUS/ ROSTOCK/34) PVNUC_IAGRE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/GREY TEAL/AUSTRALIA/2/79) PVNUC_IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/GULL/MARYLAND/5/77) PVNUC_IAGU2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/GULL/MARYLAND/704/77) PVNUC_IAGU3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/GULL/MARYLAND/1824/78) PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/GULL/MARYLAND/1815/79) PVNUC_IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/GULL/ASTRAKHAN/227/84) PVNUC_IAGUM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/GULL/MASSACHUSETTS/26/80) PVNUC_IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/GULL/MINNESOTA/945/80) PVNUC_IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/HICKOX/40) PVNUC_IAHJI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/EQUINE/JILLIN/1/89) PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/EQUINE/LONDON/1416/73) PVNUC_IAHMI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/EQUINE/MIAMI/1/63) PVNUC_IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/HONG KONG/1/68) PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/HONG KONG/5/83) PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/EQUINE/PRAGUE/1/56) PVNUC_IAHTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/EQUINE/TENNESSEE/5/86) PVNUC_IAKIE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/KEIV/59/79) PVNUC_IALEN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/LENINGRAD/54/1) PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/MALLARD/ASTRAKHAN/244/82) PVNUC_IAMAN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/MALLARD/NEW YORK/6750/78) PVNUC_IAMIN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/MINK/SWEDEN/84) PVNUC_IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/NT/60/68) PVNUC_IAOHI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/OHIO/4/83) PVNUC_IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/PARROT/ULSTER/73) PVNUC_IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/PUERTO RICO/8/34) PVNUC_IARUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/RUDDY TURNSTONE/NEW JERSEY/47/ PVNUC_IASE0 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SEAL/MASSCHUSETTES/1/80) PVNUC_IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SHEARWATER/AUSTRALIA/72) PVNUC_IASIN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SINGAPORE/1/57) PVNUC_IATE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/TEAL/ICELAND/29/80) PVNCU_IATKN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/TURKEY/MINNESOTA/1661/81) PVNUC_IATKO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/TURKEY/ONTARIO/7732/66) PVNUC_IATRS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/TERN/SOUTH AFRICA/61) PVNUC_IATRT NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/TERN/TURKEYMENAI/18/72) PVNUC_IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/TEXAS/1/77) PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/UDORN/307/72) PVNUC_IAUSS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/USSR/90/77) PVNUC_IAVI6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/VICTORIA/5/68) PVNUC_IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/WHALE/MAINE/328/84) PVNUC_IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/WHALE/PACIFIC OCEAN/19/76) PVNUC_IAWIL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/WILSON-SMITH/33) PVNUC_IAZ29 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/29/3) PVNUC_IAZ41 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/41/49) PVNUC_IAZCA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/CAMBRIDGE/1/35) PVNUC_IAZDA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/DANDONG/9/83) PVNUC_IAZGE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/GERMANY/2/81) PVNUC_IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/HONG KONG/6/76) PVNUC_IAZH3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/HONG KONG/126/82) PVNUC_IAZJ1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/IOWA/15/30) PVNUC_IAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/IOWA/1976/31) PVNUC_IAZJ3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/IOWA/46) PVNUC_IAZJ4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/ITALY/839/89) PVNUC_IAZJA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/JAMESBURG/42) PVNUC_IAZMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/MAY/54) PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/NETHERLANDS/ 12/85) PVNUC_IAZOH NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/OHIO/23/35) PVNUC_IAZW1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/WISCONSIN/1/57) PVNUC_IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/SWINE/WISCONSIN/1/61) PVNUC_INBAC NUCLEOPROTEIN INFLUENZA B VIRUS (STRAIN 234-258 B/ANN ARBOR/1/66 [COLD-ADAPTED] PVNUC_INBAD NUCLEOPROTEIN INFLUENZA B VIRUS (STRAIN 234-258 B/ANN ARBOR/1/66 [WILD-TYPE]) PVNUC_INBLE NUCLEOPROTEIN INFLUENZA B VIRUS (STRAIN 234-258 B/LEE/40) PVNUC_INBSI NUCLEOPROTEIN INFLUENZA B VIRUS (STRAIN 234-258 B/SINGAPORE/222/79) PVNUC_MABVM NUCLEOPROTEIN MARBURG VIRUS (STRAIN 16-39 141-158 MUSOKE) PVNUC_MABVP NUCLEOPROTEIN MARBURG VIRUS (STRAIN 16-39 141-158 POPP) PVO01_VACCC PROTEIN O1 VACCINIA VIRUS (STRAIN 189-204 242-252 336-358 COPENHAGEN) PVO01_VARV PROTEIN O1 VARIOLA VIRUS 189-204 242-252 336-358 PVOR1_FXMV 152 KD PROTEIN FOXTAIL MOSAIC VIRUS 846-865 PVOR1_NMV 186 KD PROTEIN NARCISSUS MOSAIC VIRUS 409-424 990-1010 PVOR1_PVMR 223 KD PROTEIN POTATO VIRUS M (STRAIN 87-104 986-1009 1251-1270 1893-1909 RUSSIAN) PVOR1_PVSP 223 KD PROTEIN POTATO VIRUS S (STRAIN 279-295 PERUVIAN) PVOR1_PVX 165 KD PROTEIN POTATO VIRUS X 128-153 234-256 306-322 1010-1030 PVOR1_PVXCP 165 KD PROTEIN POTATO VIRUS X (STRAIN 128-153 234-256 306-322 385-404 1010-1030 CP) PVOR1_PVXX3 165 KD PROTEIN POTATO VIRUS X (STRAIN 128-153 234-256 306-322 1010-1030 X3) PVOR1_SMYEA 150 KD PROTEIN OS STRAWBERRY MILD YELLOW 121-146 155-175 EDGE-ASSOCIATED VIRUS PVOR1_WCMVM 147 KD PROTEIN WHITE CLOVER MOSAIC VIRUS 121-146 (STRAIN M) PVOR1_WCMVO 147 KD PROTEIN WHITE CLOVER MOSAIC VIRUS 121-146 408-430 (STRAIN O) PVP03_HSVSA PROBABLE MEMBRANE HERPESVIRUS SAIMIRI 424-446 462-486 551-575 579-595 1051-1072 ANTIGEN 3 (STRAIN 11) PVP10_NPVAC P10 PROTEIN AUTOGRAPHA CALIFORNICA 4-26 42-59 NUCLEAR POLYHEDROSIS VIRUS PVP10_NPVOP P10 PROTEIN ORGYIA PSEUDOTSUGATA MULTI- 4-31 CAPSID POLYHEDROSIS VIRUS PVP10_NPVSE P10 PROTEIN SPODOPTERA EXIGUA NUCLEAR 35-58 POLYHEDROSIS VIRUS (STRAIN US) PVP10_RBSDV PROTEIN S10 RICE BLACK STREAKED 31-49 52-77 105-129 195-914 260-283 504-528 DWARF VIRUS PVP10_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS (WTV) 90-107 265-291 PNS10 VPV14_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS 694-715 857-879 1124-1145 ANTIGEN P140 (STRAIN B95-8) PVP19_EBV PROB CAPSID ASSEMBLY AND EPSTEIN-BARR VIRUS 346-364 DNA MATUR PROTEI (STRAIN B95-8) PVP19_HCMVA PROB CAPSID ASSEMBLY AND HUMAN CYTOMEGALOVIRUS 77-101 122-149 200-216 DNA MATUR PROTEI (STRAIN AD 169) PVP19_HSVSA PROB CAPSID ASSEMBLY AND HERPESVIRUS SAIMIRI 238-265 DNA MATUR PROTEI (STRAIN 11) PVP19_VZVD CAPSID ASSEMBLY AND DNA VARICELLA-ZOSTER VIRUS 5-31 MATUR PROTEIN (STRAIN DUMAS) PVP1_SSV1 STRUCTURAL PROTEIN VP1 SULFOLOBUS VIRUS-LIKE 8-35 PRECURSOR PARTICLE SSV1 PVP21_AMCV CORE PROTEIN P21 ARTICHOKE MOTTLED CRINKLE 37-63 VIRUS PVP21_CNV CORE PROTEIN P21 CUCUMBER NECROSIS VIRUS 40-65 PVP21_CRV CORE PROTEIN P21 CYMBIDIUM RINGSPOT VIRUS 40-63 PVP21_TBSVC CORE PROTEIN P21 TOMATO BUSHY STUNT VIRUS 40-63 (STRAIN CHERRY) PVP23_HCMVA PROBABLE CAPSID PROTEIN HUMAN CYTOMEGALOVIRUS 141-165 187-202 261-282 VP23 (STRAIN AD 169) PVP23_HSVI1 CAPSID PROTEIN VP23 HERPES SIMPLEX VIRUS (TYPE 197-220 1/STRAIN 17) PVP23_HSV6U PROBABLE CAPSID PROTEIN HERPES SIMPLEX VIRUS (TYPE 206-232 VP23 6/STRAIN UGANDA-1102) PVP23_VZVD PROBABLE CAPSID PROTEIN VARICELLA-ZOSTER VIRUS 117-132 VP23 (STRAIN DUMAS) PVP26_NPVAC P26 PROTEIN AUTOGRAPHA CALIFORNICA 12-31 58-76 117-141 NUCLEAR POLYHEDROSIS VIRUS PVP2_AHSV4 OUTER CAPSID PROTIEN AFRICAN HORSE SICKNESS VIRUS 868-891 974-994 VP2 (SEROTYPE 4/STRAIN VACCINE) PVP2_BTV10 OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 361-381 399-424 564-586 829-849 VP2 10/ISOLATE USA PVP2_BTV11 OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 361-381 399-424 829-849 VP2 11/ISOLATE USA) PVP2_BTV13 OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 362-382 420-438 617-642 657-676 VP2 13/ISOLATE USA) PVP2_BTV17 OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 361-381 VP2 17/ISOLATE USA) PVP2_BTV1A OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 420-438 654-681 VP2 1/ISOLATE AUSTRALIA) PVP2_BTV1S OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 14-31 117-140 420-438 654-681 VP2 1/ISOLATE SOUTH AFRICA) PVP2_EHDV1 OUTER CAPSID PROTEIN EPIZOOTIC HEMORRHAGIC 153-168 229-252 VP2 DISEASE VIRUS (SEROTYPE 1) PVP2_ROTBR RNA-BINDING PROTEIN BOVINE ROTAVIRUS (STRAIN RF) 301-317 334-360 522-543 673-699 764-789 VP2 PVP2_ROTBU RNA-BINDING PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 301-317 334-360 523-544 765-790 VP2 PVP2_ROTHW RNA-BINDING PROTEIN HUMAN ROTAVIRUS (SEROTYPE 309-325 432-363 532-553 674-700 774-799 VP2 1/STRAIN WA) PVP2_ROTPC RNA-BINDING PROTEIN PORCINE ROTAVIRUS (GROUP C/ 51-75 303-319 408-425 514-535 665-691 VP2 STRAIN COWDEN) PVP2_ROTS1 RNA-BINDING PROTEIN SIMIAN 11 ROTAVIRUS 34-57 219-240 302-318 335-360 523-544 674-700 765-790 VP2 (STRAIN SA11) PVP30_MABVP MINOR NUCLEOPROTEIN MARBURG VIRUS (STRAIN 50-75 VP30 MUSOKE) PVP32_ASFB7 PHOSPHOPROTEIN P32 AFRICAN SWINE FEVER VIRUS 174-197 (STRAIN BA71V) PVP35_EBOV POLYMERASE COMPLEX EBOLA VIRUS 233-256 PROTEIN VP35 PVP35_MABVM POLYMERASE COMPLEX MARBURG VIRUS (STRAIN 49-75 78-104 PROTEIN VP35 MUSOKE) PVP35_MABVP POLYMERASE COMPLEX MARBURG VIRUS (STRAIN 49-75 78-104 VP35 POPP) PVP35_VACCC IMMUNODOMINANT VACCINIA VIRUS (STRAIN 278-304 ENVELOPE PROTEIN P35 COPENHAGEN) PVP35_VACCV IMMUNODOMINANT VACCINIA VIRUS (STRAIN WR) 278-304 ENVELOPE PROTEIN P35 PVP35_VARV IMMUNODOMINANT VARIOLA VIRUS 279-305 ENVELOPE PROTEIN P35 PVP38_HSVMG 38 KD PHOSPHOPROTEIN MAREK'S DISEASE HERPESVIRUS 255-270 (STRAIN GA) PVP38_HSVMN 38 KD PHOSPHOPROTEIN MAREK'S DISEASE HERPESVIRUS 255-270 (STRAIN MD11/75C/R2) PVP39_NPVAC MAJOR CAPSID PROTEIN AUTOGRAPHA CALIFORNICA 296-311 NUCLEAR POLYHEDROSIS VIRUS PVP39_NPVOP MAJOR CAPSID PROTEIN ORGYIA PSEUDOTSUGATA 107-134 214-240 295-316 MULTICAPSID POLYHEDROSIS VIRUS PVP3_ASHV4 VP3 CORE PROTEIN AFRICAN HORSE SICKNESS VIRUS 65-85 126-147 215-230 845-862 (SEROTYPE 4/STRAIN VACCINE) PVP3_BTV10 VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 123-144 212-227 10/ISOLATE USA) PVP3_BTV17 VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 123-144 212-227 17/ISOLATTE USA) PVP3_BTV1A VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 123-144 212-227 1/ISOLATE AUSTRALIA) PVP3_EHDV1 VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC 121-142 671-695 DISEASE VIRUS (SEROTYPE 1) PVP3_EHDVA VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC 121-142 675-695 DISEASE VIRUS (SEROTYPE 2/STRAIN AUS PVP3_RDV MAJOR 114 KD STRUCTURAL RICE DWARF VIRUS (RDV) 89-108 340-360 367-393 690-717 742-768 748-768 960-975 PROTEIN PVP3_ROTPC INNER CORE PROTEIN PORCINE ROTAVIRUS (GROUP C/ 405-429 VP3 STRAIN COWDEN) PVP3_ROTS1 INNER CORE PROTEIN SIMIAN 11 ROTATVIRUS 401-425 426-444 512-536 796-822 VP3 (STRAIN SA11) PVP40_EBV CAPSID PROTEIN P40 EPSTEIN-BARR VIRUS 429-454 (STRAIN B95-8) PVP40_HSV11 CAPSID PROTEIN P40 HERPES SIMPLEX VIRUS 141-168 472-492 (TYPE 1/STRAIN 17) PVP40_HSVEB CAPSID PROTEIN P40 EQUINE HERPESVIRUS TYPE 1 50-67 95-119 483-504 (STRAIN AB4P) PVP40_HSVSA CAPSID PROTEIN P40 HERPESVIRUS SAIMIRI 342-368 (STRAIN 11) PVP40_ILTVT CAPSID PROTEIN P40 INFECTIOUS LARYNGOTRACHEI- 506-528 TIS VIRUS (STRAIN THRONE V882) PVP40_MABVM MATRIX PROTEIN VP40 MARBURG VIRUS (STRAIN 95-110 MUSOKE) PVP40_MABVP MATRIX PROTEIN VP40 MARBURB VIRUS (STRAIN 95-110 POPP) PVP40_NPVBM STRUCTURAL BOMBYX MORI NUCLEAR 223-242 256-272 GLYCOPROTEIN P40 POLYHEDROSIS VIRUS PVP40_VZVD CAPSID PROTEIN VP24 VARICELLA-ZOSTER VIRUS 47-64 (STRAIN DUMAS) PVP41_NPVAC STRUCTURAL AUTOGRAPHA CALIFORNICA 229-248 262-278 GLYCOPROTEIN GP41 NUCLEAR POLYHEDROSIS VIRUS PVP41_ROTS1 OUTER CAPSID PROTEIN SIMIAN 11 ROTAVIRUS 483-508 VP4 (STRAIN SA11) PVP42_ROTS1 OUTER CAPSID PROTEIN SIMIAN 11 ROTAVIRUS 395-411 483-508 VP4 (STRAIN SA11) PVP47_NPVAC VIRAL TRANSCRIPTION AUTOGRAPHA CALIFORNICA 14-38 REGULATOR P47 NUCLEAR POLYHEDROSIS VIRUS PVP48_NPVOP P48 PROTEIN ORGYIA PSEUDOSUGATA 136-157 MULTICAPSID POLYHEDROSIS VIRUS PVP4A_VARV MAJOR CORE PROTEIN VARIOLA VIRUS 273-288 P4A PRECURSOR PVP4B_VACCC MAJOR CORE PROTEIN VACCINIA VIRUS (STRAIN 331-358 P4B PRECURSOR COPENHAGEN) PVP4B_VACCV MAJOR CORE PROTEIN VACCINIA VIRUS (STRAIN WR) 331-358 P4B PRECURSOR PVP4B_VARV MAJOR CORE PROTEIN VARIOLA VIRUS 331-358 P4B PRECURSOR PVP4_BTV10 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 174-191 233-249 545-561 10/ISOLATE USA) PVP4_BTV11 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 174-191 233-249 535-551 11/ISOLATE USA) PVP4_BTV13 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 174-191 233-249 535-551 13/ISOLATE USA) PVP4_BTV2A VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 174-193 233-249 535-551 2/ISOLATE USA) PVP4_NCDV OUTER CAPSID PROTEIN NEBRASKA CALF DIARRHEA 483-508 VP4 VIRUS (STRAIN NCDV-LINCOLN) PVP4_RDV NONSTRUCTURAL PROTEIN RICE DWARF VIRUS 386-407 493-514 626-645 PNS4 PVP4_ROTB4 OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (SEROTYPE 483-508 VP4 6/STRAIN B64) PVP4_ROTBC OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (STRAIN 483-508 VP4 C486) PVP4_ROTBU OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 483-508 VP4 PVP4_ROTEH OUTER CAPSID PROTEIN EQUINE ROTAVIRUS (STRAIN 226-250 483-508 VP4 H-2) PVP4_ROTH1 OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE/ 181-207 234-249 482-507 VP4 1/STRAIN 1076) PVP4_ROTH5 OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE/ 181-207 234-249 482-507 VP4 2/STRAIN RV-5) PVP4_ROTH6 OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 483-508 VP4 1/STRAIN 69M) PVP4_ROTHD OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207 234-249 482-507 VP4 2/STRAIN DS1) PVP4_ROTHJ OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (STRAIN K8) 483-508 524-548 VP4 PVP4_ROTHK OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (STRAIN KU) 76-91 181-207 234-249 482-507 VP4 PVP4_ROTHL OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (STRAIN L26) 181-207 234-249 482-507 VP4 PVP4_ROTHM OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207 234-249 482-507 VP4 1/STRAIN M37) PVP4_ROTHN OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE/ 181-208 235-250 483-508 VP4 3/STRAIN MCN13) PVP4_(—ROTHP) OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207 234-249 482-507 VP4 3/STRAIN P) PVP4_ROTHT OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207 234-249 482-507 VP4 4/STRAIN ST THOMAS 3) PVP4_ROTHV OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207 482-507 VP4 4/STRAIN VA70) PVP4_ROTHW OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207 482-507 VP4 1/STRAIN WA) PVP4_ROTP5 OUTER CAPSID PROTEIN PORCINE ROTAVIRUS (SEROTYPE 235-250 483-508 VP4 5/STRAIN OSU) PVP4_ROTPC OUTER CAPSID PROTEIN PORCINE ROTAVIRUS (GROUP 487-512 VP4 C/STRAIN COWDEN) PVP4_ROTPG OUTER CAPSID PROTEIN PORCINE ROTAVIRUS (SEROTYPE 234-249 482-507 VP4 GOTTFRIED) PVP4_ROTPY OUTER CAPSID PROTEIN PORCINE ROTAVIRUS 235-250 483-508 VP4 (SEROTYPE YM) PVP4_ROTRH OUTER CAPSID PROTEIN RHESUS ROTA VIRUS 483-508 VP4 PVP4_ROTSF OUTER CAPSID PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN 483-508 VP4 SA11-FEM) PVP4_ROTSS OUTER CAPSID PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN 395-411 483-508 VP4 SA11-SEM) PVP4_SBMV P4 PROTEIN SOUTHERN BEAN MOSAIC VIRUS 90-114 PVP4_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 192-215 416-438 498-519 564-591 PNS4 PVP5_BTV10 OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 295-317 326-345 494-517 VP5 10/ISOLATE USA) PVP5_BTV11 OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 295-317 326-345 494-517 VP5 11/ISOLATE USA) PVP5_BTV13 OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 295-317 494-517 VP5 13/ISOLATE USA) PVP5_BTV1A OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 87-102 295-317 VP5 1/ISOLATE AUSTRALIA) PVP5_BTV1S OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 295-317 VP5 1/ISOLATE SOUTH AFRICA) PVP5_BTV2A OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 295-317 VP5 2/ISOLATE USA) PVP5_RDV OUTER COAT PROTEIN P5 RICE DWARF VIRUS 265-284 622-639 690-715 PVP61_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 9-27 232-249 261-276 10/ISOLATE USA) PVP61_NPVAC 61 KD PROTEIN AUTOGRAPHA CALIFORNICA 321-337 438-462 NUCLEAR POLYHEDROSIS VIRUS PVP62_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 5-23 257-372 10/ISOLATE USA) PVP62_MRDV PROB NONSTRUCTURAL MAIZE ROUGH DWARF VIRUS 130-146 36 3 KD PROTEIN PVP64_NPVOP MAJOR ENV ORGYIA PSEUDOTSUGATA 81-99 235-252 286-313 GLYCOPROTEIN PREC MULTICAPSID POLYHEDROSIS VIRUS PVP67_NPVAC MAJOR ENV AUTOGRAPHA CALIFORNICA 84-102 238-255 GLYCOPROTEIN PREC NULCEAR POLYHDEDROSIS VIRUS PVP67_MPVGM MAJOR ENVELOPE GALLERIA MELLONELLA 155-172 GLYCOPROTEIN NUCLEAR POLYHEDROSIS VIRUS PVP6_BTV11 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 5-23 228-245 257-272 11/ISOLATE USA) PVP6_BTV13 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 5-23 228-245 257-272 13/ISOLATE USA) PVP6_BTV17 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 5-23 228-245 257-272 17/ISOLATE USA) PVP6_BTV1S VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 9-27 232-249 261-276 1/ISOLATE SOUTH AFRICA) PVP6_BTV2A VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 204-221 233-248 2/ISOLATE USA) PVP6_WTV STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS 374-397 PVP6_WTVNJ STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS 374-397 (STRAIN NJ) PVP74_NPVAC P74 PROTEIN AUTOGRAPHA CALIFORNICA 254-275 NUCLEAR POLYHEDROSIS VIRUS PVP75_HSVSA PROBABLE MEMBRANE HERPESVIRUS SAIMIRI 127-147 ANTIGEN 75 (STRAIN 11) PVP79_NPVAC 79 KD PROTEIN AUTOGRAPHA CALIFORNICA 274-301 405-420 678-704 NUCLEAR POLYHEDROSIS VIRUS PVP7_BTV13 VP7 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 197-222 13/ISOLATE USA) PVP7_EHDV1 VP7 CORE PROTEIN EPIZOOTIC HEMORRHAGIC 205-222 301-323 DISEASE VIRUS (SEROTYPE 1) PVP7_RDV NONSTRUCTURAL PROTEIN RICE DWARF VIRUS 400-416 PNS7 PVP7_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 262-285 PNS7 PVP80_NPVAC CAPSID PROTEIN P80 AUTOGRAPHA CALIFORNICA 98-123 638-660 NUCLEAR POLYHEDROSIS VIRUS PVP87_NPVOP CAPSID PROTEIN P87 ORGYIA PSEUDOTSUGATA MUL- 571-593 TICAPSID POLYHYDROSIS VIRUS PVP8_BTV10 NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 104-120 P8 10/ISOLATE USA) PVP8_BTV11 NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 104-120 P8 11/ISOLATE USA) PVP8_BTV13 NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 104-120 P8 13/ISOLATE USA) PVP8_BTV17 NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 104-120 P8 17/ISOLATE USA) PVP8_BTV1A NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 104-120 P8 1/ISOLATE AUSTRALIA) PVP8_BTV1S NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 104-120 P8 1/ISOLATE SOUTH AFRICA) PVP8_BTV2A NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 104-120 P8 1/ISOLATE SOUTH USA) PVP8_RDV OUTER CAPSID PROTEIN RICE DWARF VIRUS 374-400 P8 ( PVP8_RGDV OUTER CAPSID PROTEIN RICE GALL DWARF VIRUS 177-202 216-242 398-425 P8 PVP8_VACCC STRUCTURAL PROTEIN VACCINIA VIRUS (STRAIN 225-242 VP8 PRECURSOR COPENHAGEN) PVP8_VACCV STRUCTURAL PROTEIN VACCINIA VIRUS (STRAIN WR) 225-242 VP8 PRECURSOR PVP8_VARV STRUCTURAL PROTEIN VARIOLA VIRUS 225-242 VP8 PRECURSOR PVP8_WTV OUTER CAPSID PROTEIN WOUND TUMOR VIRUS 111-129 214-241 251-271 379-405 P8 PVP9_RDV NONSTRUCTURAL PROTEIN RICE DWARF VIRUS 51-72 PN59 PVP9_RGDV NONSTRUCTURAL PROTEIN RICE GALL DWARF VIRUS 151-175 59 PVPHE_NPVAC 29 KD POLYHEDRAL AUTOGRAPHA CALIFONICA NU- 145-166 225-245 ENVELOPE PROTEIN CLEAR POLYHEDROSIS VIRUS PVPHE_NPVOP 32 KD POLYHEDRAL ORGYIA PSEUDOTSUGATA MUL- 122-144 ENVELOPE PROTEIN TICAPSID POLYHEDROSIS VIRUS PVPRT_ADE12 ENDOPROTEASE HUMAN ADENOVIRUS TYPE 12 161-181 PVPRT_MMTVB PROTEASE MOUSE MAMMARY TUMOR VIRUS 42-63 (STRAIN BR6) PVPRT_MPMV PROTEASE SIMIAN MASON-PFIZER VIRUS 80-99 PVPRT_SMRVH PROTEASE SQUIRREL MONKEY RETROVIRUS 256-271 PVPRT_SRV1 PROTEASE SIMIAN RETROVIRUS SRV-1 80-99 PVPU_HV1B1 VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-27 VIRUS TYPE 1 (BH10 ISOLATE HXB3) PVPU_HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY 4-27 VIRUS TYPE 1 (BH8 ISOLATE) PVPU_HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-28 VIRUS TYPE 1 (BRAIN ISOLATE) PVPU_HV1BR VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-27 VIRUS TYPE 1 (BRU ISOLATE) PVPU_HV1EL VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-26 VIRUS TYPE 1 (EL1ISOLATE) PVPU_HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY 4-27 VIRUS TYPE 1 (HXB2 ISOLATE) PVPU_HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-28 VIRUS TYPE 1 (JRCSF ISOLATE) PVPU_HV1MA VPU PROTEIN HUMAN IMMUNODEFICIENCY 2-27 VIRUS TYPE 1 (MAL ISOLATE) PVPU_HV1MN VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-20 VIRUS TYPE 1 (MN ISOLATE) PVPU_HV1ND VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-28 VIRUS TYPE 1 (NDK ISOLATE) PVPU_HV1PV VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-27 VIRUS TYPE 1 (PV22 ISOLATE) PVPU_HV1S1 VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-28 VIRUS TYPE 1 (SF162 ISOLATE) PVPU_HV1SC VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-28 VIRUS TYPE 1 (SC ISOLATE) PVPU_HV1Z2 VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-28 VIRUS TYPE 1 (Z2/CDC-Z34 ISOLATE) PVPU_JSRV VPU PROTEIN SHEEP PULMONARY ADENO- 24-45 MATOSIS VIRUS (JAAGSIEKTE SHEEP RET PVPX_HV2BE VPX PROTEIN HUMAN IMMUNODEFICIENCY 10-32 VIRUS TYPE 2 (ISOLATE BEN) PVPX_HV2CA VPX PROTEIN HUMAN IMMUNODEFICIENCY 10-32 VIRUS TYPE 2 (ISOLATE CAM2) PVPX_HV2D1 VPX PROTEIN HUMAN IMMUNODEFICIENCY 10-32 VIRUS TYPE 2 (ISOLATE D194) PVPX_HV2D2 VPX PROTEIN HUMAN IMMUNODEFICIENCY 9-31 VIRUS TYPE 2 (ISOLATE D205.7) PVPX_HV2G1 VPX PROTEIN HUMAN IMMUNODEFICIENCY 10-32 VIRUS TYPE 2 (ISOLATE GHANA-1) PVPX_HV2NZ VPX PROTEIN HUMAN IMMUNODEFICIENCY 10-32 VIRUS TYPE 2 (ISOLATE NIH-Z) PVPX_HV2RO VPX PROTEIN HUMAN IMMUNODEFICIENCY 10-32 VIRUS TYPE 2 (ISOLATE ROD) PVPX_HV2SB VPX PROTEIN HUMAN IMMUNODEFICIENCY 10-32 VIRUS TYPE 2 (ISOLATE SBLISY) PVPX_HV2ST VPX PROTEIN HUMAN IMMUNODEFICIENCY 10-32 VIRUS TYPE 2 (ISOLATE ST) PVPX_LDV VPX PROTEIN LACTATE DEHYDROGENASE- 145-165 ELEVATING VIRUS PVPX_SIVAI VPX PROTEIN SIMIAM IMMUNODEFICIENCY 66-84 VIRUS (ISOLATE AGM/CLONE GR1-1)(S PVPX_SIVMI VPX PROTEIN SIMIAN IMMUNODEFICIENCY 10-32 VIRUS (MM142-83 ISOLATE) (SIV-MAC) PVPX_SIVMK VPX PROTEIN SIMIAN IMMUNODEFICIENCY 10-32 VIRUS (K6W ISOLATE)(SIV-MAC) PVPX_SIVML VPX PROTEIN SIMIAN IMMUNODEFICIENCY 10-32 VIRUS (K78 ISOLATE)(SIV-MAC) PVPX_SIVS4 VPX PROTEIN SIMIAN IMMUNODEFICIENCY 10-32 VIRUS (F236/SMH4 ISOLATE) (SOOTY M PVPX_SIVSP VPX PROTEIN SIMIAN IMMUNODEFICIENCY 10-32 VIRUS (PBJ/BC13 ISOLATE) (SOOTY MA PVRNA_BSMV ALPHA-A PROTEIN BARLEY STRIPE MOSAIC 290-312 904-929 VIRUS (BSMV) PVS05_ROTBR NONSTRUCTURAL PROTEIN BOVINE ROTAVIRUS 140-157 461-487 NCVP2 (STRAIN RF) PVS05_ROTH1 NONSTRUCTURAL PROTEIN HUMAN ROTAVIRUS (STRAIN 140-157 428-450 457-473 NCVP2 IGV-80-3) PVS05_ROTPC NONSTRUCTURAL PROTEIN PORCINE ROTAVIRUS (GROUP 88-112 NS53 C/STRAIN COWDEN) PVS05_ROTS1 NONSTRUCTURAL PROTEIN SIMINA 11 ROTAVIRUS (STRAIN 399-414 NCVP2 SA11) PVS06_ROTBR VP6 PROTEIN BOVINE ROTAVIRUS (STRAIN RF) 202-225 PVS06_ROTBS VP6 PROTEIN BOVINE ROTAVIRUS (GROUP C/ 64-85 STRAIN SHINTOKU) PVS06_ROTBU VP6 PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 202-225 PVS06_ROTEF VP6 PROTEIN EQUINE ROTAVIRUS (STRAIN 202-225 F1-14) PVS06_ROTEH VP6 PROTEIN EQUINE ROTAVIRUS (STRAIN 202-225 H-2) PVS06_ROTGA VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN 22-40 ADRV) (ADULT DIARRHEA ROTAVIRUS) PVS06_ROTG1 VP6 PROTEIN ROTAVIRUS (GROUP B/ 22-40 STRAIN IDIR) PVS06_ROTH1 VP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE 202-225 1/STRAIN 1076) PVS06_ROTHC VP6 PROTEIN HUMAN ROTAVIRUS (GROUP C/ 64-85 STRAIN BRISTOL) PVS06_ROTHS VP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE 202-225 2/STRAIN S2) PVS06_ROTHW VP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE 202-225 1/STRAIN WA) PVS06_ROTPC VP6 PROTEIN PORCINE ROTAVIRUS (GROUP C/ 64-85 314-340 STRAIN COWDEN) PVS06_ROTPG VP6 PROTEIN PORCINE ROTAVIRUS (STRAIN 202-225 GOTTFRIED) PVS07_ROTBJ GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN 131-155 KN-4) PVS08_RPTPC GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (GROUP C/ 117-136 STRAIN COWDEN) PVS08_ROTS1 NONSTRUCTURAL PROTEIN SIMINA 11 ROTAVIRUS 274-295 NCVP4 (STRAIN SA11) PVS09_ROTB6 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (SEROTYPE 131-155 6/STRAIN 61A) PVS09_ROTBA GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN 131-155 A44) PVS09_ROTBB GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (SEROTYPE 131-155 10/STRAIN B223) PVS09_ROTBK GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN 131-155 KK3) PVS09_ROTBT GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (SEROTYPE 131-155 1/STRAIN T449) PVS09_ROTC7 GLYCOPROTEIN VP7 CHICKEN ROTAVIRIUS A 134-158 (SEROTYPE 7/STRAIN CH2) VPS09_ROTEL GLYCOPROTEIN VP7 EQUINE ROTATVIRUS (STRAIN 131-155 L338) PVS09_ROTG1 GLYCOPROTEIN VP7 ROTAVIRUS (GROUP B/ 205-232 PRECURSOR IDIR) PVS09_ROTH4 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131-155 197-212 4/STRAIN RV-4) PVS09_ROTHA GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 197-212 2/STRAIN HU5) PVS09_ROTHD GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 197-212 2/STRAIN DS1) PVS09_TOTHH GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 197-212 2/STRAIN HN126) PVS09_ROTHL GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (STRAIN L26) 131-155 197-212 PVS09_ROTHM GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131-155 197-212 1/STRAIN M37) PVS09_ROTHO GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131-155 197-212 1/STRAIN MO AND STRAIN D) PVS09_ROTHP GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SERPTYPE 131-155 3/STRAIN P) PVS09_ROTHR GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131-155 3/STRAIN RRV) PVS09_ROTHS GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 197-212 2/STRAIN S2) PVS09_ROTHV GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 197-212 4/STRAIN VA70) PVS09_ROTHW GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131-155 197-212 1/STRAIN WA) PVS09_ROTP5 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 131-155 197-212 5/STRAIN OSU) PVS09_ROTP6 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 131-155 5/STRAIN TFR-41) PVS09_ROTPB GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 197-212 4/STRAIN BEN-144) PVS09_ROTPM GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 197-212 4/STRAIN BM1-1) PVS09_ROTRH GLYCOPROTEIN VP7 RHESUS ROTAVIRUS 131-155 PVS09_ROTS1 GLYCOPROTEIN VP7 SIMIAN 11 ROTAVIRUS 131-155 (STRAIN SA11) PVS11_ROTGA NONSTRUCTURAL PROTEIN ROTAVIRUS (GROUP B/STRAIN 136-153 ADRV) (ADULT DIARRHEA ROTAVIRUS) PVSH_HRSVA SMALL HYDROPHOBIC HUMAN RESPIRATORY 16-41 PROTEIN SYNCYTIAL VIRUS (STRAIN A2) PVSH_MUMP1 SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN SBL-1), 7-29 PROTEIN AND MUMPS VIRUS (STRAIN SBL) PVSH_MUMP2 SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN 7-29 PROTEIN EDINGBURGH 2 -6) PVSH_MUMP4 SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN 7-29 PROTEIN EDINGBURGH 4) PVSH_MUMPA SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN 10-29 PROTEIN MATSUYAMA) PVSH_MUMPB SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN BELFAST) 7-29 PROTEIN PVSH_MUMPE SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN ENDERS) 7-29 PROTEIN PVSH_MUMPJ SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN 7-29 PROTEIN JERYL-LYNN) PVSH_MUMPK SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN KILHAM) 7-29 PROTEIN PVSH_MUMPL SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN BRISTOL I) 6-29 PROTEIN PVSH_MUMPM SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN 10-29 PROTEIN MIYAHRARA VACCINE) PVSH_MUMPR SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN RW) 7-29 PROTEIN PVSH_MUMPT SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN 10-29 PROTEIN TAKAJIASHI) PVSH_MUMPU SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN 10-29 PROTEIN URABE VACCINE AM9) PVSI1_REOVL SIGMA 1 PROTEIN REOVIRUS (TYPE 1/ 110-136 PRECURSOR STRAIN LANG) PVSI3_REOVD SIGMA 3 PROTEIN REOVIRUS (TYPE 3/ 152-170 STRAIN DEARING) PVSI3_REOVJ SIGMA 3 PROTEIN REOVIRUS (TYPE 2/ 152-170 STRAIN D5/JONES) PVSI3_REOVL SIGMA 3 PROTEIN REOVIRUS (TYPE 1/ 152-170 STRAIN LANG) PVSIS_REOVL SIGMA 1-S PROTEIN REOVIRUS (TYPE 1/ 79-101 STRAIN LANG) PVST2_HEVBU STRUCTURAL PROTEIN HEPATITIS E VIRUS 292-311 2 PRECURSOR (STRAIN BURMA) PVST2_HEVME STRUCTURAL PROTEIN HEPATITIS E VIRUS 292-311 2 PRECURSOR (STRAIN MEXICO) PVST2_HEVMY STRUCTURAL PROTEIN HEPATITIS E VIRUS 292-311 2 PRECURSOR (STRAIN MYANMAR) PVST2_HEVPA STRUCTURAL PROTEIN HEPATITIS E VIRUS 292-311 2 PRECURSOR (STRAIN PAKISTAN) PVST2_HEVRH STRUCTURAL PROTEIN HEPATITIS E VIRUS 160-179 2 (ISOLATE RHESUS) PVT2_MYSVL TUMOR NECROSIS FACTOR MYXOMA VIRUS (STRAIN 261-283 SOL RECEPTOR PREC LAUSANNE) PVT2_SFVKA TUMOR NECROSIS FACTOR SHOPE FIBROMA VIRUS 270-289 SOL RECEPTOR PREC (STRAIN KASZA) PVT3A_CAPVI PROTEIN T3A CAPRIPOSVIRUS (STRAIN INS-1) 116-138 PVT4_SFVKA T4 PROTEIN SHOPE FIBROMA VIRUS 125-148 (STRAIN KASZA) PVTER_EBV PROBABLE DNA EPSTEIN-BARR VIRUS 117-139 166-192 227-250 PACKAGING PROTEIN (STRAIN B95-8) PVTER_HCMVA PROBABLE DNA HUMAN CYTOMEGALOVIRUS 409-430 PACKAGING PROTEIN (STRAIN AD169) PVTER_HSVII PROBABLE DNA HERPES SIMPLEX VIRUS 363-380 673-688 PACKAGING PROTEIN (TYPE 1/STRAIN 17) PVTER_HSV6U PROBABLE DNA HERPES SIMPLEX VIRUS 260-278 PACKAGING PROTEIN (TYPE 6/STRAIN UGANDA-1102) PVTER_HSVEB PROBABLE DNA EQUINE HERPESVIRUS 364-381 PACKAGING PROTEIN TYPE 1 (STRAIN AB4P) PVTER_HSVII PROBABLE DNA ICTALURID HERPESVIRUS 1 309-333 756-781 PACKAGING PROTEIN PVTER_HSVSA PROBABLE DNA HERPES VIRUS SAIMIRI 218-241 PACKAGING PROTEIN (STRAIN 11) PVTER_VZVD PROBABLE DNA VARICELLA-ZOSTER VIRUS 372-389 PACKAGING PROTEIN (STRAIN DUMA5) PX_HPBGS PROTEIN X GROUND SQUIRREL 68-85 HEPATITIS VIRUS PX_WHV1 PROTEIN X WOODCHUCK HEPATITIS VIRUS 68-85 1 PX_WHV59 PROTEIN X WOODCHUCK HEPATITIS VIRUS 68-85 59 PX_WHV7 PROTEIN X WOODCHUCK HEPATITIS VIRUS 68-85 7 PX_WHV8 PROTEIN X WOODCHUCK HEPATITIS VIRUS 68-85 8 PX_WHV81 PROTEIN X WOODCHUCK HEPATITIS VIRUS 68-85 8 (INFECTIOUS CLONE) PX_WHVW6 PROTEIN X WOODCHUCK HEPATITIS VIRUS 68-85 W64 (ISOLATE PWS23) PY104_ADE07 HYPOTHETICAL 10 4 KD HUMAN ADENOVIRUS 55-73 EARLY PROTEIN TYPE 7 PY108_SSV1 HYPOTHETICAL 10 8 KD SULFOLOBUS VIRUS-LIKE 66-90 PROTEIN PARTICLE SSV1 PY10K_MSMV HYPOTHETICAL 10 9 KD MAIZE STREAK VIRUS (SOUTH- 24-47 PROTEIN AFRICAN ISOLATE) PY118_SSV1 HYPOTHETICAL 11 8 KD SULFOLOBUS VIRUS-LIKE 42-59 PROTEIN PARTICLE SSV1 PY11K_PASV HYPOTHETICAL 11 9 KD PANICUM STREAK VIRUS 29-52 PROTEIN PY12K_BNYVG RNA-3 HYPOTHETICAL BEET NECROTIC YELLOW VEIN 15-42 11 6 KD PROTEIN MOSIAC VIRUS (ISOLATE G1) PY12K_CMVSI HYPOTHETICAL 12 4 KD CYMBIDIUM MOSAIC VIRUS 8-30 PROTEIN (STRAIN SINGAPORE) PY137_ADE02 HYPOTHETICAL PROTEIN HUMAN ADENOVIRUS TYPE 2 28-50 B-137 PY13K_CLVK HYPOTHETICAL 13 1 KD CASSA VA LETENT VIRUS 34-55 PROTEIN (STRAIN WEST KENYAN 844) PY13K_CLVN HYPOTHETICAL 13 1 KD CASSA VA LETENT VIRUS 34-55 PROTEIN (STRAIN NIGERIAN) PY13K_TYLCM HYPOTHETICAL 13 3 KD TOMATO YELLOW LEAF CURL 10-27 PROTEIN VIRUS (STRAIN MARMANDE) PY13K_TYLCV HYPOTHETICAL 13 4 KD TOMATO YELLOW LEAF CURL 34-55 PROTEIN VIRUS PY145_ADE07 HYPOTHETICAL 14 5 KD HUMAN ADENOVIRUS TYPE 7 108-132 EARLY PROTEIN PY145_CSMV HYPOTHETICAL 14 5 KD CHLORIS STRIATE MOSAIC 54-80 PROTEIN VIRUS PY18K_SSV1 HYPOTHETICAL 18 0 KD SULFOLOBUS VIRUS-LIKE 100-125 141-162 PROTEIN PARTICLE SSV1 PY206_ADE07 HYPOTHETICAL 20 6 KD HUMAN ADENOVIRUS TYPE 1 50-73 EARLY PROTEIN PY25K_BNYVF RNA-3 HYPOTHETICAL 24 7 BEET NECROTIC YELLOW VEIN 163-188 KD PROTEIN MOSIAC VIRUS (ISOLATE F2) PY29K_NPVAC HYPOTHETICAL 29 9 KD AUTOGRAPHA CALIFORNICA 90-106 PROTEIN NUCLEAR POLYHEDROSIS VIRUS PY2_SOCMV HYPOTHETICAL PROTEIN SOYBEAN CHLOROTIC 65-90 2 MOTTLE VIRUS PY32K_SSV1 HYPOTHETICAL 31 7 KD SULFOLOBUS VIRUS-LIKE 122-142 PROTEIN PARTICLE SSV1 PY6K0_SSV1 HYPOTHETICAL 6 0 KD SULFOLOBUS VIRUS-LIKE 23-44 PROTEIN PARTICLE SSV1 PY7K4_VACCV HYPOTHETICAL 7 4 KD VACCINIA VIRUS 21-36 PROTEIN (STRAIN WR) PY7K_MEASH HYPOTHETICAL 7 KD MEASLES VIRUS 3-25 PROTEIN (STRAIN HALLE) PY7_SOCMV HYPOTHETICAL PROTEIN SOYBEAN CHLOROTIC 96-120 7 MOTTLE VIRUS PY85K_SSV1 HYPOTHETICAL 85 7 KD SULFOLOBUS VIRUS-LIKE 80-105 155-173 543-565 657-675 764-784 PROTEIN PARTICLE SSV1 PY8_SOCMV HYPOTHETICAL PROTEIN 8 SOYBEAN CHLOROTIC MOTTLE 10-27 VIRUS PY97_ADE07 HYPOTHETICAL 9 7 KD HUMAN ADENOVIRUS TYPE 7 54-77 EARLY PROTEIN PY9K2_SSV1 HYPOTHETICAL 9 2 KD SULFOLOBUS VIRUS-LIKE 16-41 62-77 PROTEIN PARTICLE SSV1 PYAL1_EBV HYPOTHETICAL BALF1 EPSTEIN-BARR VIRUS 205-220 PROTEIN (STRAIN B95-8) PYB01_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 354-374 ORF1 PROTEIN HP-438[MUNICH]) PYB07_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 104-121 ORF7 PROTEIN HP-438[MUNICH]) PYB09_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 49-67 ORF9 PROTEIN HP-438[MUNICH]) PYB10_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 84-100 ORF10 PROTEIN HP-438[MUNICH]) PYB12_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 114-134 154-169 ORF12 PROTEIN HP-438[MUNICH]) PYBL2_SFV3L BEL-2 PROTEIN SIMIAN FOAMY VIRUS 113-128 (TYPE 3/STRAIN LK3) PYBL3_FOAMV BEL-3 PROTEIN HUMAN SPUMARETROVIRUS 52-78 PYDH1_HSVSC HYP 28 7 KD PROTEIN HERPESVIRUS SAIMIRI 206-230 IN DHFR 3'REGION (SUBGROUP C/STRAIN 488) PYDH3_HSVSC HYP 9 5 KD PROTEIN HERPESVIRUS SAIMIRI 69-90 IN DHFR 3'REGION (SUBGROUP C/STRAIN 488) PYEC4_EBV HYPOTHETICAL EC-RF4 EPSTEIN-BARR VIRUS 200-222 PROTEIN (STRAIN B95-8) PYGA1_HSVMB HYPOTHETICAL 23 6 KD MAREK'S DISEADE 175-190 PROTEIN HERPESVIRUS (STRAIN BC-1) PYGA1_HSVMM HYPOTHETICAL 23 6 KD MAREK'S DISEADE 175-190 PROTEIN HERPESVIRUS (STRAIN MD5) PYHL4_HCMVA HYPOTHETICLA PROTEIN HUMAN CYTOMEGALOVIRUS 101-121 HHLF4 (STRAIN AD169) PYHR3_VACCV HYP HOST RANGE 27 4 KD VACCINIA VIRUS (STRAIN WR) 86-102 PROTEIN PYIO2_CVMAS HYP PROTEIN IN MURINE CORONAVIRUS MHV 141-156 NUCLEOCAPSID ORF PYIOR_CVM1 HYP PROTEIN IN MURINE CORONAVIRUS MHV 141-156 NUCLEOCAPSID ORF PYIOR_CVMS HYP PROTEIN IN MURINE CORONAVIRUS MHV 7-33 NUCLEOCAPSID ORF PYKR2_EBV HYPOTHETICAL BKRF2 EPSTEIN-BARR VIRUS 67-90 PROTEIN (STRAIN B95-8) PYL12_ADE41 HYPOTHETICAL 8 0 KD HUMAN ADENOVIRUS TYPE 41 53-73 PROTEIN PYMR2_EBV BMRF2 PROTEIN EPSTEIN-BARR VIRUS 76-100 128-155 215-241 330-350 (STRAIN B95-8) PYMSP_IRV22 HYPOTHETICAL 15 9 KD SIMULIUM IRIDESCENT VIRUS 23-46 PROTEIN (INSECT IRIDESCENT VIRUS TYPE 22) PYOR1_ADEG1 HYPOTHETICAL PROTEIN AVIAN ADENOVIRUS GAL1 59-80 (STRAIN PHELPS)(FOWL ADENO- VIRUS 1) PYOR1_COYMV HYPOTHETICAL 23 KD COMMELINA YELOW 56-83 PROTEIN MOTTLE VIRUS PYOR1_TTV1 HYPOTHETICAL 7 9 KD THERMOPROTEUS TENAX VIRUS 13-40 PROTEIN 1 (STRAIN KRA1) PYOR2_COYMV HYPOTHETICAL 15 KD COMMELINA YELLOW MOTTLE 23-49 PROTEIN VIRUS PYOR2_EAV HYPOTHETICAL 25 6 KD EQUINE ARTERITIS VIRUS 165-192 PROTEIN PYOR2_LELV HYPOTHETICAL 28 4 KD LELYSTAD VIRUS 196-212 PROTEIN PYOR3_LVX HYPOTHETICAL 11 8 KD LILY VIRUX X 71-92 PROTEIN PYOR3_NMV HYPOTHETICAL 14 KD NARCISSUS MOSAIC VIRUS 7-30 PROTEIN PYOR3_PVX HYPOTHETICAL 12 KD POTATO VIRUS X 11-34 PROTEIN PYOR3_PVXCP HYPOTHETICAL 12 KD POTATO VIRUS X (STRAIN CP) 11-34 PROTEIN PYOR3_WCMVM HYPOTHETICAL 13 KD WHITE CLOVER MOSAIC VIRUS 9-29 PROTEIN (STRAIN M) PYOR3_WCMVO HYPOTHETICAL 13 KD WHITE CLOVER MOSAIC VIRUS 9-31 PROTEIN (STRAIN O) PYOR5_ADEG1 HYPOTHETICAL 31 5 KD AVIAN ADENOVIRUS GAL1 69-86 PROTEIN (STRAIN PHELPS) (FOWL AND ADENOVIRUS 1) PYOR5_EAV HYPOTHETICAL 28 7 KD EQUINE ARTERITIS VIRUS 139-158 PROTEIN PYOR6_NMV HYPOTHETICAL 10 KD NARCISSUS MOSAIC VIRUS 10-26 PROTEIN PYORI_TTV1 HYPOTHETICAL 16 6 KD THERMOPROTEUS TENAX VIRUS 13-32 PROTEIN 1 (STRAIN KRA 1) PYORL_TTV1 HYPOTHETICAL 16 5 KD THERMOPROTEUS TENAX VIRUS 16-39 PROTEIN 1 (STRAIN KRA 1) PYORM_TTV1 HYPOTHETICAL 38 6 KD THERMOPROTEUS TENAX VIRUS 82-102 233-256 PROTEIN 1 (STRAIN KRA 1) PYORP_TTV1 HYPOTHETICAL 20 2 KD THERMOPROTEUS TEXAX VIRUS 91-115 PROTEIN (STRAIN KRA1) PYR24_RTBV HYPOTHETICAL P24 RICE TUNGRO BACILLIFORM 2-25 104-126 PROTEIN VIRUS PYP24_RTBVP HYPOTHETICAL P24 RICE TUNGRO BACILLIFORM 2-25 104-126 PROTEIN VIRUS (ISOLATE PHILIPPINES) PYP47_NPVAC HYPOTHETICAL 43 5 KD AUTOGRAPHA CALIFORNICA 211-234 PROTEIN NUCLEAR POLYHEDROSIS VIRUS PYP62_NPVOP HYPOTHETICAL 12 2 KD ORGYIA PSEUDOSUGATA 82-108 PROTEIN MULTICAPSID POLYHEDROSIS VIRUS (OP PYP63_NPVOP HYPOTHETICAL 40 0 KD ORGYIA PSEUDOSUGATA 27-54 215-230 PROTEIN MULTICAPSID POLYHEDROSIS VIRUS (OP PYP7B_TNVD HYPOTHETICAL P7B TOBACCO NECROSIS VIRUS 13-31 PROTEIN (STRAIN D) (TNV) PYPO4_NPVLD HYPOTHETICAL 8 5 KD LYMANTRIA DISPAR MULTI- 16-35 PROTEIN CAPSID NUCLEAR POLYHEDROSIS VIRUS PYRF1_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 42-66 RF1 (TYPE 6/STRAIN GS) PYRF2_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 55-74 RF2 (TYPE 6/STRAIN GS) PYRF3_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 32-56 RF3 (TYPE 6/STRAIN GS) PYRP1_IRV6 REPETITIVE PROTEIN CHILD IRIDESCENT VIRUS (CIV) 20-43 ORF1 (INSECT IRIDESCENT VIURS TYPE 6) PYRP4_IRV6 REPETITIVE PROTEIN CHILD IRIDESCENT VIRUS (CIV) 44-69 ORF4 (INSECT IRIDESCENT VIURS TYPE 6) PYRP5_IRV6 REPETITIVE PROTEIN CHILD IRIDESCENT VIRUS (CIV) 98-123 179-204 260-285 ORF5 (INSECT IRIDESCENT VIURS TYPE 6) PYRR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 199-223 PROTEIIN (STRAIN B95-8) PYRR2_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 164-182 PROTEIIN (STRAIN B95-8) PYsR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 92-113 PROTEIIN (STRAIN B95-8) PYtR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 383-401 PROTEIIN (STRAIN B95-8) PYUB2_NPVOP HYPOTHETICAL 24 0 KD ORGYIA PSEUDOTSUGATA 133-152 PROTEIN MULTICAPSID POLYHEDROSIS VIRUS (OP PYVAE_VACCC HYPOTHETICAL 18 2 KD VACCINIA VIRUS (STRAIN 82-99 140-156 PROTEIN COPENHAGEN) PYVAF_VACCC HYPOTHETICAL 8 4 KD VACCINIA VIRUS (STRAIN 17-40 51-68 PROTEIN COPENHAGEN) PYVAL_VACCV HYPOTHERTICAL 9 9 KD VACCINIA VIRUS (STRAIN WR), 21-43 PROTEIN AND VACCINIA VIRUS (STRAIN COPE PYVAT_VACCV HYPOTHETICAL 8 9 KD VACCINIA VIRUS (STRAIN WR), 28-46 PROTEIN AND VACCINIA VIRUS (STRAIN COPE PYVBE_VACCV HYPOTHETICAL 10 5 KD VACCINIA VIRUS (STRAIN WR), 9-28 PROTEIN AND VACCINIA VIRUS (STRAIN COPE PYVBG_VACCC HYPOTHETICAL 11 2 KD VACCINIA VIRUS (STRAIN 37-54 PROTEIN COPENHAGEN) PYVCA_VACCC HYPOTHETICAL 8 0 KD VACCINIA VIRUS (STRAIN 18-35 COPENHAGEN) PYVD2_VACCV HYPOTHETICAL 8 6 KD VACCINIA VIRUS (STRAIN WR), 5-26 36-52 PROTEIN AND VACCINIA VIRUS (STRAIN COPE) PYVDA_VACCC HYPOTHETICAL 9 2 KD VACCINIA VIRUS (STRAIN 22-38 44-64 PROTEIN COPENHAGEN) PYVDA_VACCV HYPOTHETICAL 9 2 KD VACCINIA VIRUS (STRAIN WR) 3-18 22-38 44-64 PROTEIN PYVFA_VACCC HYPOTHETICLA 7 1 KD VACCINIA VIRUS (STRAIN 48-67 PROTEIN COPENHAGEN) PVYFF_VACCC HYPOTHETICAL 8 8 KD VACCINIA VIRUS (STRAIN 23-42 PROTEIN COPENHAGEN) PYVGA_VACCC HYPOTHETICAL 14 3 KD VACCINIA VIRUS (STRAIN 105-127 PROTEIN COPENHAGEN) PYVKB_VACCC HYPOTHETICAL 9 0 KD VACCINIA VIRUS (STRAIN 54-70 PROTEIN COPENHAGEN) PYZL2_EBV HYPOTHETICAL BZLF2 EPSTEIN-BARR VIRUS 150-166 PROTEIN (STRAIN B95-8) PY14K_CMSV HYPOTHETICAL 14 5 KD CHLORISIS STRIATE MOSAIC 54-80 PROTEIN VIRUS PY18K_SSV1 HYPOTHETICAL 18 0 KD SULFOLOBUS VIRUS-LIKE 100-125 141-162 PROTEIN PARTICLE SSV1 PY206_ADE07 HYPOTHETICAL 20 6 KD HUMAN ADENOVIRUS TYPE 7 50-73 EARLY PROTEIN PY25K_BNYVF RNA-3 HYPOTHETICAL 24 7 BEET NECROTIC YELLOW VEIN 163-188 KD PROTEIN MOSAIC VIRUS (ISOLATE F2) PY29K_NPVAC HYPOTHETICAL 29 9 KD AUTOGRAPHA CALIFORNICA 90-106 PROTEIN NECROSIS POLYHEDROSIS VIRUS PY2_SCOMV HYPOTHETICAL PROTEIN 2 SOYBEAN CHLOROTIC MOTTLE 65-90 VIRUS PY32K_SSV1 HYPOTHETICAL 31 7 KD SULFOLOBUS VIRUS-LIKE 122-142 PROTEIN PARTICLE SSV1 PY6K0_SSV1 HYPOTHETICAL 6 0 KD SULFOLOBUS VIRUS-LIKE 23-44 PROTEIN PARTICLE SSV1 PY7K4_VACCV HYPOTHETICAL 7 4 KD VACCINIA VIRUS (STRAIN WR) 21-36 PROTEIN PY7K_MEASH HYPOTHETICAL 7 KD MEASLES VIRUS (STRAIN HALLE) 3-25 PROTEIN PY7_SOCMV HYPOTHETICAL PROTEIN 7 SOYBEAN CHLOROTIC MOTTLE 96-120 VIRUS PY85K_SSV1 HYPOTHETICAL 85 7 KD SULFOLOBUS VIRUS-LIKE 80-105 155-173 543-565 657-675 764-784 PROTEIN PARTICLE SSV1 PY8_SOCMV HYPOTHETICAL PROTEIN 8 SOYBEAN CHLOROTIC MOTTLE 10-27 VIRUS PY97_ADE07 HYPOTHETICAL 9 7 KD HUMAN ADENOVIRUS TYPE 7 54-77 EARLY PROTEIN PY9K2_SSV1 HYPOTHETICAL 9 2 KD SULFOLOBUS VIRUS-LIKE 16-41 62-77 PROTEIN PARTICLE SSV1 PYAL1_EBV HYPOTHETICAL BALF1 EPSTEIN-BARR VIRUS 205-220 PROTEIN (STRAIN B95-8) PYB01_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 354-374 ORF1 PROTEIN HP-438[MUNICH]) PYB07_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 104-121 ORF7 PROTEIN HP-438[MUNICH]) PYB09_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 49-67 ORF9 PROTEIN HP-438[MUNICH]) PYB010_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 84-100 ORF10 PROTEIN HP-438[MUNICH]) PYB012_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 114-134 154-169 ORF12 PROTEIN HP-438[MUNICH]) PYBL2_SFV3L BEL-2 PROTEIN SIMIAN FOAMY VIRUS 113-128 (TYPE 3/STRAIN LK3) PYBL3_FOAMV BEL-3 PROTEIN HUMAN SPUMARETOVIRUS 52-78 PYDH1_HSVSC HYPOTHETICAL 28 7 KD HERPESVIRUS SAIMIRI 206-230 PROTEIN IN DHFR (SUBGROUP C/STRAIN 488) 3'REGION PYDH3_HSVSC HYPOTHETICAL 9 5 KD HERPESVIRUS SAIMIRI 69-90 PROTEIN IN DHFR (SUBGROUP C/STRAIN 488) 3'REGION PYEC4_EBV HYPOTHETICAL EC-RF4 EPSTEIN-BARR VIRUS 200-222 PROTEIN (STRAIN B95-8) PYGA1_HSVMB HYPOTHETICAL 23 6 KD MAREK'S DISEASE 175-190 PROTEIN HERPESVIRUS (STRAIN BC-1) PYGA1_HSVMM HYPOTHETICAL 23 6 KD MAREK'S DISEASE 175-190 PROTEIN HERPESVIRUS (STRAIN MID-5) PYHL4_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 101-121 HHLF4 (STRAIN AD169) PYHR3_VACCV HYPOTHETICAL HOST VACCINIA VIRUS (STRAIN WR) 86-102 RANGE 27 4 KD PROTEIN PYIO2_CVMA5 HYPOTHETICAL PROTEIN IN MURINE CORONAVIRUS MHV 141-156 NUCLEOCAPSID ORF PYIOR_CVMI HYPOTHETICAL PROTEIN IN MURINE CORONAVIRUS MHV 141-156 NUCLEOCAPSID ORF PYIOR_CVMS HYPOTHETICAL PROTEIN IN MURINE CORONAVIRUS MHV 7-33 NUCLEOCAPSID ORF PYKR2_EBV HYPOTHETICAL BKRF2 EPSTEIN-BARR VIRUS 67-90 PROTEIN (STRAIN B95-8) PYUL12_ADE41 HYPOTHETICAL 8 0 KD HUMAN ADENOVIRUS TYPE 41 53-73 PROTEIN PYMR2_EBV BMRF2 PROTEIN EPSTEIN-BARR VIRUS 76-100 128-155 215-241 330-350 (STRAIN B95-8) PYMSP_IRV22 HYPOTHETICAL 15 9 KD SIMULIUM IRIDESCENT VIRUS 23-46 PROTEIN (INSECT IRIDESCENT VIRUS TYPE 22) PYOR1_ADEG1 HYPOTHETICAL PROTEIN AVIAN ADENOVIRUS GAL1 59-80 (STRAIN PHELPS) (FOWL ADENOVIRUS 1) PYOR1_COYMV HYPOTHETICAL 23 KD COMMELINA YELLOW MOTTLE 56-83 PROTEIN VIRUS PYOR1_TTV1 HYPOTHETICAL 7 9 KD THERMOPROTEUS TENAX VIRUS 13-40 PROTEIN 1 (STRAIN KRA1) PYOR2_COYMV HYPOTHETICAL 15 KD COMMELINA YELLOW MOTTLE 23-49 PROTEIN VIRUS PYOR2_EAV HYPOTHETICAL 25 6 KD EQUINE ARTERITIS VIRUS 165-192 PROTEIN PYOR2_LELV HYPOTHETICAL 28 4 KD LELYSTAD VIRUS 196-212 PROTEIN PYOR3_LVX HYPOTHETICAL 11 8 KD LILY VIRUS X 71-92 PROTEIN PYOR3_NMV HYPOTHETICAL 14 KD NARCISSUS MOSAIC VIRUS 7-30 PROTEIN PYOR3_PVX HYPOTHETICAL 12 KD POTATO VIRUX X 11-34 PROTEIN PYOR3_PVXCP HYPOTHETICAL 12 KD POTATO VIRUS X (STRAIN CP) 11-34 PROTEIN PYOR3_WCMVM HYPOTHETICAL 13 KD WHITE CLOVER MOSAIC 9-29 PROTEIN VIRUS (STRAIN M) PYOR3_WCMVO HYPOTHETICAL 13 KD WHITE CLOVER MOSAIC 9-31 PROTEIN VIRUS (STRAIN O) PYOR5_ADEG1 HYPOTHETICAL 31 5 KD AVIAN ADENOVIRUS GAL1 69-86 PROTEIN (STRAIN PHELPS) (FOWL ADENOVIRUS 1) PYOR5_EAV HYPOTHETICAL 28 7 KD EQUINE ARTERITIS VIRUS 139-158 PROTEIN PYOR6_NMV HYPOTHETICAL 10 KD NARCISSUS MOSAIC VIRUS 10-26 PROTEIN PYOR1_TTV1 HYPOTHETICAL 16 6 KD THERMOPROTEUS TENAX VIRUS 13-32 PROTEIN 1 (STRAIN KRA1) PYOR1_TTV1 HYPOTHETICAL 16 6 KD THERMOPROTEUS TENAX VIRUS 16-39 PROTEIN 1 (STRAIN KRA1) PYORM_TTV1 HYPOTHETICAL 38 6 KD THERMOPROTEUS TENAX VIRUS 82-102 233-256 PROTEIN 1 (STRAIN KRA1) PYORP_TTV1 HYPOTHETICAL 20 2 KD THERMOPROTEUS TENAX VIRUS 91-115 PROTEIN 1 (STRAIN KRA1) PYP24_RTBV HYPOTHETICAL P24 RICE TUNGRO BASCILLIFORM 2-25 104-126 PROTEIN VIRUS PYP24_RTBVP HYPOTHETICAL P24 RICE TUNGRO BASCILLIFORM 2-25 104-126 PROTEIN VIRUS (ISOLATE PHILIPPINES) PYP47_NPVAC HYPOTHETICAL 43 5 KD AUTOGRAPHA CALIFORNICA 211-234 PROTEIN IN P47 NUCLEAR POLYHEDROSIS VIRUS 3'REGION PYP62_NPVOP HYPOTHETICAL 12 2 KD ORGYIA PSEUDOTSUGATA 82-108 PROTEIN IN P65 MULTICAPSID POLYHEDROSIS 5'REGION VIRUS (OP PYP63_NPVOP HYPOTHETICAL 40 0 KD ORGYIA PSEUDOTSUGATA 27-54 215-230 PROTEIN IN P65 MULTICAPSID POLYHEDROSIS 5'REGION VIRUS (OP PYP7B_TNVD HYPOTHETICAL P7B TOBACCO NECROSIS VIRUS 13-31 PROTEIN (STRAIN D) (TNV) PYPO4_HPVLD HYPOTHETICAL 8 5 KD LYMANTRIA DISPAR MULTI- 16-35 PROTEIN IN POL CAPSID NUCLEAR POLYHEDROSIS 3'REGION VIRUS PYRF1_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 42-66 RF1 (TYPE 6/STRAIN GS) PYRF2_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 55-74 RF2 (TYPE 6/STRAIN GS) PYRF3_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 32-56 RF3 (TYPE 6/STRAIN GS) PYRP1_IRV6 REPETITIVE PROTEIN CHILO IRIDESCENT VIRUS 20-43 ORF1 (CIV) (INSECT IRIDESCENT VIRUS TYPE 6) PYRP4_IRV6 REPETITIVE PROTEIN CHILO IRIDESCENT VIRUS 44-69 ORF4 (CIV) (INSECT IRIDESCENT VIRUS TYPE 6) PYRP5_IRV6 REPETITIVE PROTEIN CHILO IRIDESCENT VIRUS 98-123 179-204 260-285 ORF5 (CIV) (INSECT IRIDESCENT VIRUS TYPE 6) PYRR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 199-223 PROTEIN (STRAIN B95-8) PYRR2_EBV HYPOTHETICAL BRRF2 EPSTEIN-BARR VIRUS 164-182 PROTEIN (STRAIN B95-8) PYRR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 92-113 PROTEIN (STRAIN B95-8) PYRR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 383-401 PROTEIN (STRAIN B95-8) PYUB2_NPVOP HYPOTHETICAL 24 0 KD ORGYIA PSEUDOTSUGATA 133-152 PROTEIN MULTICAPSID POLYHEDROSIS VIRUS PYVAE_VACCC HHYPOTHETICAL 18 2 KD VACCINIA VIRUS (STRAIN 82-99 140-156 PROTEIN COPENHAGEN) PYVAF_VACCC HHYPOTHETICAL 8 4 KD VACCINIA VIRUS (STRAIN 17-40 51-68 PROTEIN COPENHAGEN) PYVAL_VACCV HYPOTHETICAL 9 9 KD VACCINIA VIRUS (STRAIN WR), 21-43 PROTEIN AND VACCINIA VIRUS (STRAIN COPE PYVAT_VACCV HYPOTHETICAL 8 9 KD VACCINIA VIRUS (STRAIN WR), 28-46 PROTEIN AND VACCINIA VIRUS (STRAIN COPE PYVBE_VACCV HYPOTHETICAL 10 5 KD VACCINIA VIRUS (STRAIN WR), 9-28 PROTEIN AND VACCINIA VIRUS (STRAIN COPE PYVBG_VACCC HYPOTHETICAL 11 2 KD VACCINIA VIRUS (STRAIN 37-54 PROTEIN COPENHAGEN) PYVCA_VACCC HYPOTHETICAL 11 2 KD VACCINIA VIRUS (STRAIN 18-35 PROTEIN COPENHAGEN) PYVD2_VACCV HYPOTHETICAL 8 6 KD VACCINIA VIRUS (STRAIN WR), 5-26 36-52 PROTEIN AND VACCINIA VIRUS (STRAIN COPE PYVDA_VACCC HYPOTHETICAL 9 2 KD VACCINIA VIRUS (STRAIN 22-38 44-64 PROTEIN COPENHAGEN) PYVDA_VACCV HYPOTHETICAL 9 2 KD VACCINIA VIRUS (STRAIN WR) 3-18 22-38 44-64 PROTEIN PYVFA_VACCC HYPOTHETICAL 7 1 KD VACCINIA VIRUS (STRAIN 48-67 PROTEIN COPENHAGEN) PYVFF_VACCC HYPOTHETICAL 8 8 KD VACCINIA VIRUS (STRAIN 23-42 PROTEIN COPENHAGEN) PYVGA_VACCC HYPOTHETICAL 14 3 KD VACCINIA VIRUS (STRAIN 105-127 PROTEIN COPENHAGEN) PYVKB_VACCC HYPOTHETICAL 9 0 KD VACCINIA VIRUS (STRAIN 54-70 PROTEIN COPENHAGEN) PYZL2_EBV HYPOTHETICAL BZLF2 EPSTEIN-BARR VIRUS 150-166 PROTEIN (STRAIN B95-8)

TABLE XIV SEARCH RESULTS SUMMARY FOR P23TLZIPC MOTIF PCGENE P23CTLZIP All Viruses (no bacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 PPOL2_TBRVS RNA2 POLYPROTEIN TOMATO BLACK RING VIRUS (STRAIN S) (TBRV) 617-651 1041-1077 PPOL2_TRSVR RNA2 POLYPROTEIN TOMATO RINGSPOT VIRUS 316-347 (ISOLATE RASPBERRY)(TOMRSV) PPOLG_BOVEV GENOME POLYPROTEIN BOVINE ENTEROVIRUS (STRAIN VG-5-27)(BEV) 1833-1866 2001-2037 PPOLG_BVDVN GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS (ISOLATE NADL) 102-135 1650-1678 3220-3248 PPOLG_BVDVS GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS (STRAIN SD-1) 102-135 1560-1588 3130-3158 PPOLG_BYMV GENOME POLYPROTEIN BEAN YELLOW MOSAIC VIRUS 226-255 PPOLG_COXA2 GENOME POLYPROTEIN COXSACKIEVIRUS A21 (STRAIN COE) 1120-1157 PPOLG_COXA3 GENOME POLYPROTEIN COXSACKIEVIRUS A23 (ECHO 9 VIRUS)(EC-9-V) 67-99 PPOLG_COXA9 GENOME POLYPROTEIN COXSACKIEVIRUS A9 (STRAIN GRIGGS) 1601-1633 PPOLG_COXB1 GENOME POLYPROTEIN COXSACKIEVIRUS B1 1582-1614 PPOLG_COXB3 GENOME POLYPROTEIN COXSACKIEVIRUS B3 1585-1617 PPOLG_COXB4 GENOME POLYPROTEIN COXSACKIEVIRUS B4 1583-1615 PPOLG_COXB5 GENOME POLYPROTEIN COXSACKIEVIRUS B5 835-868 1585-1617 PPOLG_DEN1S GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN SINGAPORE S275/90) 1111-1145 1485-1519 2401-2434 PPOLG_DEN1W GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN WESTERN PACIFIC) 1112-1146 PPOLG_DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681) 61-95 1112-1146 PPOLG_DEN27 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681-PDK53) 61-95 1112-1146 PPOLG_DEN2D GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN D2-04) 61-95 PPOLG_DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN JAMAICA) 61-95 1112-1146 PPOLG_DEN2N GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN NEW GUINEA C) 364-398 PPOLG_DEN2P GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN PR 159/S1) 61-95 1112-1146 PPOLG_DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TONGA 1974 832-866 PPOLG_DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 61-95 2399-2432 PPOLG_DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4 60-94 PPOLG_ECHG GENOME POLYPROTEIN ECHOVIRUS II (STRAIN GREGORY) 774-806 PPOLG_EMCV GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 1194-1226 1463-1501 PPOLG_EMCVB GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 1196-1228 1465-1503 (STRAIN EMC-B NONDIABETOGENIC) PPOLG_EMCVD GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 1196-1228 1465-1503 (STRAIN EMC-D DIABETOGENIC) PPOLG_FMDVI GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 1036-1064 1098-1133 1167-1199 1465-1501 (STRAIN A10-61)(APHTHOVIRUS A) PPOLG_FMDVA GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 1036-1074 1098-1133 1167-1199 1465-1501 (STRAIN A12)(APHTHOVIRUS A) PPOLG_FMDVO GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 1098-1133 1167-1199 1465-1501 (STRAINS OIK AND OIBFS) PPOLG_HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS 1640-1670 (ISOLATE 1)(HCV) PPOLG_HCVA GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN 1363-1393 1560-1588 3131-3159 ALFORT)(SWINE FEVER VIRUS) PPOLG_HDVB GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN 102-135 1560-1588 3131-3159 BRESCIA)(SWINE FEVER VIRUS) PPOLG_HDVBK GENOME POLYPROTEIN HEPATITIS C VIRUS 1640-1670 (ISOLATE BK)(HCV) PPOLG_HDVH GENOME POLYPROTEIN HEPATITIS C VIRUS 1640-1670 (ISOLATE H)(HCV) PPOLG_HDVH4 GENOME POLYPROTEIN HEPATITIS C VIRUS 254-291 (ISOLATE HCV-476)(HCV) PPOLG_HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS 711-742 (ISOLATE HC-J6)(HCV) PPOLG_HCVJ8 GENOME POLYPROTEIN HEPATITIS C VIRUS 711-742 1893-1924 (ISOLATE HC-J8)(HCV) PPOLG_HCVJA GENOME POLYPROTEIN HEPATITIS C VIRUS 1640-1670 (ISOLATE JAPANESE)(HCV) PPOLG_HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS 1640-1670 (ISOLATE HC-JT)(HCV) PPOLG_HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS 1640-1670 (ISOLATE TAIWAN)(HCV PPOLG_HPAV2 GENOME POLYPROTEIN HEPATITIS A VIRUS 1514-1550 2068-2099 (STRAIN 24A) PPOLG_HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 43C) 1514-1550 2068-2099 PPOLG_HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 18F) 1514-1550 2068-2099 PPOLG_HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN HM-175) 1515-1551 2069-2100 PPOLG_HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN LA) 1515-1551 2069-2100 PPOLG_HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN MBB) 1515-1551 2069-2100 PPOLG_HPAVS GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS (STRAIN AGM-27) 831-868 1517-1553 PPOLG_HPB14 GENOME POLYPROTEIN HUMAN RHINOVIRUS 14 (HRV-14) 1094-1132 2005-2041 PPOLG_HRV1B GENOME POLYPROTEIN HUMAN RHINOVIRUS 1B (HRV-1B) 1453-1485 1816-1849 1983-2019 PPOLG_HRV2 GENOME POLYPROTEIN HUMAN RHINOVIRUS 2 (HRV-2) 1446-1475 1809-1842 1976-2012 PPOLG_HRV89 GENOME POLYPROTEIN HUMAN RHINOVIRUS 89 (HRV-89) 1460-1492 1823-1856 1990-2026 PPOLG_HUEV7 GENOME POLYPROTEIN HUMAN ENTEROVIRUS 70 (STRAIN J670/71 1108-1145 PPOLG_IBDVO STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL 222-260 DISEASE VIRUS (STRAIN OH) PPOLG_JAEV1 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 61-95 1233-1269 1516-1549 2779-2813 3274-3311 (STRAIN SA-14) PPOLG_JAEV5 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 61-95 1233-1269 1516-1549 2779-2813 3274-3311 (STRAIN SA(V)) PPOLG_JAEVJ GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 61-95 1233-1269 1516-1549 2779-2813 3274-3311 (STRAIN JAOARS982) PPOLG_JAEVN GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 1161-1197 (STRAIN NAKAYAMA) PPOLG_KUNJM GENOME POLYPROTEIN KUNJIN VIRUS (STRAIN MRM61C) 61-95 561-594 3275-3312 PPOLG_LANVT GENOME POLYPROTEIN LANGAT VIRUS (STAIN TP21) 1157-1188 1519-1551 2230-2264 2366-2398 3095-3132 PPOLG_MCFA GENOME POLYPROTEIN MOSQUITO CELL FUSING AGENT (CFA FLAVIVIRUS) 1174-1206 1330-1359 PPOLG_MDMV GENOME POLYPROTEIN MAIZE DWARF MOSAIC VIRUS (MDMV) 322-351 PPOLG_MVEV GENOME POLYPROTEIN MURRAY VALLEY ENCEPHALITIS VIRUS 61-95 1305-1342 PPOLG_OMV GENOME POLYPROTEIN ORNITHOGALUM MOSAIC VIRUS 344-376 PPOLG_PEMVC GENOME POLYPROTEIN PEPPER MOTTLE VIRUS 826-859 1086-1124 (CALIFORNIA ISOLATE)(PEMV) PPOLG_POL1M GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY) 1121-1158 PPOLG_POL1S GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN SABIN) 1122-1159 PPOLG_POL2L GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN LANSING) 1120-1157 PPOLG_POL2W GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN W-2) 1120-1157 PPOLG_POL32 GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAIN 23127) 1119-1156 PPOLG_POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAINS 1119-1156 P3/LEON/37 AND P3/LEON 12A[1]B) PPOLG_PPVD GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN D)(PPV) 2960-2991 3084-3113 PPOLG_PPVEA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN EL AMAR)(PPV) 1337-1368 1461-1490 PPOLG_PPVNA GENOME POLYPROTEIN PLUM POX POTYVIRUS (ISOLATE NAT)(PPV) 2944-2975 3068-3097 PPOLG_PPVRA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN RANKOVIC)(PPV) 2959-2990 3083-3112 PPOLG_PSBMV GENOME POLYPROTEIN PEA SEED-BORNE MOSAIC VIRUS (STRAIN DPDI) 931-966 1411-1445 3149-3178 PPOLG_PVYHU GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN HUNGARIAN)(PVY) 1302-1336 3004-3033 PPOLG_PVYN GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN N)(PVY) 1302-1336 PPOLG_PYFVI GENOME POLYPROTEIN PARSNIP YELLOW FLECK VIRUS 230-262 1110-1139 1903-1931 (ISOLATE P-121)(PYI-V) PPOLG_SBMVN GENOME POLYPROTEIN SOYBEAN MOSAIC VIRUS (STRAIN N) 245-274 PPOLG_STEVM GENOME POLYPROTEIN ST LOUIS ENCEPHALITIS VIRUS (STRAIN M51-7) 61-95 1301-1331 PPOLG_SUMVS GENOME POLYPROTEIN SUGARCANE MOSAIC VIRUS (STRAIN SC) 307-336 PPOLG_SVDVH GENOME POLYPROTEIN SWINE VESICULAR DISEASE VIRUS (STRAIN H/3′76) 1585-1617 PPOLG_SVDVU GENOME POLYPROTEIN SWINE VESICULAR DISEASE VIRUS 1585-1617 (STRAIN UKG/27/72) PPOLG_TBEVS GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 835-869 1157-1188 2366-2398 3093-3130 (STRAIN SOFJIN)(TBEV) PPOLG_TBEVW GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 1157-1188 2366-2398 3095-3132 (WESTERN SUBTYPE)(THEV) PPOLG_TEV GENOME POLYPROTEIN TOBACCO ETCH VIRUS (TEV) 827-865 2998-3027 PPOLG_TMEVB GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS VIRUS 1074-1102 1193-1221 1470-1508 1908-1939 (STRAIN BEAN 8386) PPOLG_TMEVD GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS VIRUS 1072-1100 1191-1219 1468-1506 1906-1937 (STRAIN DA) PPOLG_TMEVG GENMOE POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS VIRUS 1074-1102 1193-1221 1407-1508 1908-1939 (STRAIN GDVH) PPOLG_TUMV GENOME POLYPROTEIN TURNIP MOSAIC VIRUS (TUMV) 1573-1602 PPOLG_TVMV GENOME POLYPROTEIN TOBACCO VEIN MOTTLING VIRUS (TVMV) 2698-2733 PPOLG_WMV2 GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II 958-987 PPOLG_WNV GENOME POLYPROTEIN WEST NILE VIRUS 61-95 557-590 3272-3309 PPOLG_YEFV1 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN 17D) 1157-1186 1228-1266 1495-1531 2308-2340 3092-3127 PPOLG_YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN PASTEUR 17D-204) 1157-1186 1228-1266 1495-1531 2308-2340 3092-3127 PPOLG_ZYMV GENOME POLYPROTEIN ZUCCHINI YELLOW MOSAIC VIRUS (ZYMV) 329-358 PPOLH_POLIM GENOME POLYPROTEIN POLIOVIRUS TYPE I (STRAIN MAHONEY) 1122-1159 PPOLH_WMV2 GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II 244-273 PPOLN_EEVVT NONSTRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 613-648 1436-1468 (STRAIN TRINIDAD DONKEY) PPOLN_FCVC6 NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS (STRAIN DFI/68 FIV)(FCV) 327-365 PPOLN_FCVF4 NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS (STRAIN JAPANESE F4)(FCV) 300-333 PPOLN_FCVF9 NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS (STRAIN F9)(FCV) 803-841 PPOLN_HEVBU NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN BURMA)(HEV) 1618-1652 PPOLN_HEVME NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN MEXICO)(HEV) 1616-1650 PPOLN_HEVMY NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN MYANMAR)(HEV) 1618-1652 PPOLN_HEVPA NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN PAKISTAN)(HEV) 1617-1651 PPOLN_MIDDV NONSTRUCTURAL POLYPROTEIN MIDDELBURG VIRUS 25-57 PPOLN_ONRVG NONSTRUCTURAL POLYPROTEIN O′NYONG-NYONG VIRUS (STRAIN GULU)(ONN) 1144-1180 1404-1439 PPOLN_RHDV NON-STRUCTURAL POLYPROTEIN RABBIT HEMORRHAGIC DISEASE VIRUS (RHDV 299-337 1562-1594 PPOLN_SFV NONSTRUCTURAL POLYPROTEIN SEMLIKI FOREST VIRUS 1146-1175 1406-1441 PPOLN_SINDO NONSTRUCTURAL POLYPROTEIN SINDBIS VIRUS 1454-1486 (SUBTYPE OCKELBO/STRAIN EDSBYN 82-5) PPOLN_SINDV NONSTRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAIN HRSP) 1454-1486 PPOLS_EEEV STRUCTURAL POLYPROTEIN EASTERN EQUINE ENCEPHALITIS VIRUS 524-556 PPOLS_EEEV3 STRUCTURAL POLYPROTEIN EASTERN EQUINE ENCEPHALITIS VIRUS 525-557 (STRAIN VA33[TEN BROECK]) PPOLS_EEVV8 STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 1203-1239 (STRAIN TC-83) PPOLS_EEVVT STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 1203-1239 (STRAIN TRINIDAD DONKEY) PPOLS_ONNVG STRUCTURAL POLYPROTEIN O′NYONG-NYONG VIRUS (STRAIN GULU)(ONN) 1150-1182 1201-1235 PPOLS_RRVN STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092)(RRV) 1216-1250 PPOLS_RRVT STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48)(RRV) 1216-1250 PPOLS_SFV STRUCTURAL POLYPROTEIN SEMLIKI FOREST VIRUS 1215-1251 PPOLS_SINDO STRUCTURAL POLYPROTEIN SINDBIS VIRUS (SUBTYPE 1197-1233 OCKELBO/STRAIN EDSBYN 82-5) PPOLS_SINDV STRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAINS HRSP AND HRLP) 1197-1233 PPOLS_WEEV STRUCTURAL POLYPROTEIN WESTERN EQUINE ENCEPHALITIS VIRUS 1188-1224 PPOL_BIV06 POL POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 742-773 (ISOLATE 106)(BIV) PPOL_BIV27 POL POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 742-773 (ISOLATE 127)(BIV) PPOL_BLVAU POL POLYPROTEIN BOVINE LEUKEMIA VIRUS 343-374 (AUSTRALIAN ISOLATE)(BLV) PPOL_CAEVC POL POLYPROTEIN CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 206-240 322-355 (STRAIN CORK)(CAEV) PPOL_COYMV PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE VIRUS (COYMV) 1234-1267 1484-1518 1750-1788 1800-1831 PPOL_EIAV9 POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 166-198 506-539 (CLONE 1369)(EIAV) PPOL_EIAVC POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 166-198 506-539 (CLONE CL22)(EIAV) PPOL_EIAVY POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 166-198 505-538 (ISOLATE WYOMING)(EIAV) PPOL_FOAMV POL POLYPROTEIN HUMAN SPUMARETROVIRUS (FOAMY VIRUS) 126-154 PPOL_GALV POL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 348-378 PPOL_HTL1A POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 657-688 (STRAIN ATK)(HTLV-1) PPOL_HTL1C POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 657-688 (CARIBBEAN ISOLATE)(HTLV-1) PPOL_HV1A2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-364 500-537 (ARV2/SF2 ISOLATE)(HIV-1) PPOL_HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-376 512-549 (BH10 ISOLATE)(HIV-1) PPOL_HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-376 512-549 (BH5 ISOLATE)(HIV-1) PPOL_HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-376 512-549 (BRU ISOLATE)(HIV-1) PPOL_HV1EL POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330-363 499-536 (ELI ISOLATE)(HIV-1) PPOL_HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-364 500-537 (HXB2 ISOLATE)(HIV-1) PPOL_HV1JR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 335-368 504-541 (JRCSF ISOLATE)(HIV-1) PPOL_HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330-363 (MAL ISOLATE)(HIV-1) PPOL_HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-367 503-540 (MN ISOLATE)(HIV-1) PPOL_HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-364 500-537 (NEW YORK-5 ISOLATE)(HIV-1) PPOL_HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330-363 499-536 (NDK ISOLATE)(HIV-1) PPOL_HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-364 500-537 (OYI ISOLATE)(HIV-1) PPOL_HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-376 512-549 (PV22 ISOLATE)(HIV-1) PPOL_HV1RH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330-363 499-536 (RF/HAT ISOLATE)(HIV-1) PPOL_HV1U4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330-363 499-536 (STRAIN UGANDAN/ISOLATE PPOL_HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330-363 499-536 (Z2/CDC-Z34 ISOLATE)(HIV-1) PPOL_HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 353-386 (ISOLATE CAM2)(HIV-2) PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 353-386 (ISOLATE NH-Z)(HIV-2) PPOL_HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 354-387 (ISOLATE ROD)(HIV-2) PPOL_IPHA PUTATIVE POL POLYPROTEIN HAMSTER INTRACISTERNAL A-PARTICLE (IAP-H18 460-496 PPOL_JSRV POL POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 186-220 PPOL_MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS (MPMV) 650-681 PPOL_OMVVS POL POLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV) 61-98 102-130 182-216 298-331 PPOL_RTBV POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS (RTBV) 788-824 891-919 1399-1433 PPOL_RTBVP POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 788-824 891-919 1399-1433 (ISOLATE PHILIPPINES)(RTBV) PPOL_SFV3L POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/STRAIN LK3)(SFV-3) 337-365 PPOL_SIVCE POL POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY 355-388 524-561 VIRUS (SIV(CPZ))(CIV) PPOL_SOCMV ENZYMATIC POLYPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 17-55 524-561 PPOL_SRV POL POLYPROTEIN SIMIAN RETROVIRUS SRV-1 650-681 PPOL_VILV POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514)  80-117 201-235 317-350 PPOL_VILV1 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/CLONE LV1-1KS1)  80-117 317-350 PPOL_VILV2 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/CLONE LV1-1KS2)  80-117 201-235 317-350 PPP41_HSV6G PHOSPHOPROTEIN P41 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 60-91 PPTP_NPVAC PROTEIN-TYROSINE AUTOGRAPHA CALIFORNICA NUCLEAR 53-85 PHOSPHATASE POLYHEDROSIS VIRUS PREEP_CSV REPEAT ELEMENT PROTEIN CAMPOLETIS SONORENSIS VIRUS (CSV) 113-149 PREV_BIV27 REV PROTEIN BOVINE IMMUNODEFICIENCY VIRUS  74-109 (ISOLATE 127)(BIV) PREV_EIAV9 REV PROTEIN EQUINE INFECTIOUS ANEMIA 44-79 VIRUS (CLONE 1369)(EIAV) PREV_EIAVC REV PROTEIN EQUINE INFECTIOUS ANEMIA 44-79 VIRUS (CLONE CL22)(EIAV) PREV_EIAVY REV PROTEIN EQUINE INFECTIOUS ANEMIA  74-109 VIRUS (ISOLATE WYOMING)(EIAV) PREV_SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 25-62 (TYP-1 ISOLATE)(SIV-AGM) PRIRI_ASFM2 RIBONUCLEOSIDE-DIPHOSPHATE AFRICAN SWINE FEVER VIRUS 630-666 REDUCTASE LARGE CH (ISOLATE MALAWILIL 20/1)(ASFV) PRIRI_HCMVA RIBONUCLEOSIDE-DIPHOSPHATE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 279-311 393-430 449-477 REDUCTASE LARGE CH PRIRI_HSVEB RIBONUCLEOSIDE-DIPHOSPHATE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 60-92 503-531 REDUCTASE LARGE CH PRIRI_VACCC RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN COPENHAGEN) 203-235 REDUCTASE LARGE CH PRIRI_VACCV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN WR) 203-235 REDUCTASE LARGE CH PRIRI_VARV RIBONUCLEOSIDE-DIPHOSPHATE VARIOLA VIRUS 203-235 REDUCTASE LARGE CH PRIRI_V2VD RIBONUCLEOSIDE-DIPHOSPHATE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(V2V) 34-72 221-254 488-516 REDUCTASE LARGE CH PRMIL_AVEVR RMIL SERINE/THREONINE- AVIAN ROUS-ASSOCIATED VIRUS TYPE 1 149-177 PROTEIN KINASE TRANSFORM PRMIL_AVII1 RMIL SERINE/THREONINE- AVIAN RETROVIRUS IC10 133-161 PROTEIN KINASE TRANSFORM PRP94_VACCV RNA-POLYMERASE-ASSOCIATED VACCINIA VIRUS (STRAIN WR), AND VACCINIA 399-427 TRANSCRIPTION SPECIF VIRUS (STRAIN COPENHAGE PRP94_VARV RNA-POLYMERASE-ASSOCIATED VARIOLA VIRUS 399-427 TRANSCRIPTION SPECIF PRPO1_VACCV DNA-DIRECTED RNA POLY- VACCINIA VIRUS (STRAIN WR) 1005-1033 MERASE 147 KD POLYPEPTIDE PRPO2_CAPVK DNA-DIRECTED RNA POLY- CAPRIPOXVIRUS (STRAIN KS-1) 297-333 667-696 MERASE 132 KD POLYPEPTIDE PRPO2_COWPX DNA-DIRECTED RNA POLY- COWPOX VIRUS (CPV) 202-236 542-578 MERASE 132 KD POLYPEPTIDE PRPO2_VACCV DNA-DIRECTED RNA POLY- VACCINIA VIRUS (STRAIN WR), AND VACCINIA 202-236 542-578 MERASE 132 KD POLYPEPTIDE VIRUS (STRAIN COPENHAE PRPO2_VARV DNA-DIRECTED RNA POLY- VARIOLA VIRUS 202-236 542-578 MERASE 132 KD POLYPEPTIDE PRPO7_VACCV DNA-DIRECTED RNA POLY- VACCINIA VIRUS (STRAIN WR), AND VACCINIA 38-66 MERASE 19 KD POLYPEPTIDE VIRUS (STRAIN COPENHAGE PRPO7_VARV DNA-DIRECTED RNA POLY- VARIOLA VIRUS 38-66 MERASE 19 KD POLYPEPTIDE PRPO8_FOWP1 DNA-DIRECTED RNA POLY- FOWLPOX VIRUS (STRAIN FP-1) 57-88 MERASE 18 KD POLYPEPTIDE PRPOA_LEVL RNA-DIRECTED RNA POLY- LELYSTAD VIRUS (LV) 1233-1268 3133-3163 3426-3457 MERASE PRPOL_EAV RNA-DIRECTED RNA POLY- EQUINE ARTERITIS VIRUS (EAV) 171-207 3041-3072 MERASE PRRP1_DHVI1 RNA-DIRECTED RNA POLY- DHORI VIRUS (STRAIN INDIAN/1313/61)(DHO)  96-125 199-234 MERASE SUBUNIT P1 PRRP1_IAVI7 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 138-170 MERASE SUBUNIT P1 VICTORIA/3/75) PRRP1_INCJJ RNA-DIRECTED RNA POLY- INFLUENZA C VIRUS (STRAIN C/ 564-598 MERASE SUBUNIT P1 JJ/50) PRRP2_IAANN RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 398-435 484-518 MERASE SUBUNIT P2 ANN ARBOR/6/60) PRRP2_IADH2 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 DUCK/HOKKAIDO/8/80) PRRP2_IAFPR RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 FOWL PLAGUE VIRUS/ROSTOCK/34) PRRP2_IAGU2 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 GULL/MARYLAND/704/77) PRRP2_IAHLO RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 EQUINE/LONDON/1416/73) PRRP2_IAHTE RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 EQUINE/TENNESSEE/5/86) PRRP2_IAKOR RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 KOREA/426/68) PRRP2_IALE1 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 LENINGRAD/134/57) PRRP2_IALE2 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 LENINGRAD/134/17/57) PRRP2_IAMAN RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 MALLARD/NEW YORK/6750/78) PRRP2_IANT6 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 NT/60/68) PRRP2_IAPI0 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 PINTAIL/ALBERTA/119/79) PRRP2_IAPUE RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 PUERTO RICO/8/34) PRRP2_IARUD RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 RUDDY TURNSTONE/NEW JERSEY/47/85) PRRP2_IASIN RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 SINGAPORE/1/57) PRRP2_IATKM RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 TURKEY/MINNESOTA/833/80) PRRP2_IAVI7 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 VICTORIA/3/75) PRRP2_IAWIL RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 WILSON-SMITH/33) PRRP2_IAZH2 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 SWINE/HONG KONG/81/78) PRRP2_IAZH3 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 SWINE/HONG KONG/126/82) PRRP2_IAZI1 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 SWINE/IOWA/15/30) PRRP2_IAZTF RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 484-518 MERASE SUBUNIT P2 SWINE/TENNESSEE/26/77) PRRP3_IABUD RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 515-553 585-613 MERASE SUBUNIT P3 BUDGERIGAR/HOKKAIDO/1/77) PRRP3_IAFPR RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 585-613 MERASE SUBUNIT P3 FOWL PLAGUE VIRUS/ROSTOCK/34) PRRP3_IAFPW RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 579-613 MERASE SUBUNIT P3 FOWL PLAGUE VIRUS/WEYBRIDGE) PRRP3_IAGUE RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 585-613 MERASE SUBUNIT P3 GULL/MARYLAND/704/77) PRRP3_IAGUA RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 585-613 MERASE SUBUNIT P3 GULL/ASTRAKHAN/227/84) PRRP3_IAHPR RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 585-613 MERASE SUBUNIT P3 EQUINE/PRAGUE/1/56) PRRP3_IAMAN RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 585-613 MERASE SUBUNIT P3 MALLARD/NEW YORK/6750/78) PRRP3_IARUD RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 585-613 MERASE SUBUNIT P3 RUDDY TURNSTONE/NEW JERSEY/47/85) PRRP3_IASE2 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 585-613 MERASE SUBUNIT P3 SEAL/MASSACHUSETTS/133/82) PRRP3_IATKM RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 585-613 MERASE SUBUNIT P3 TURKEY/MINNESOTA/833/80) PRRP3_IAZI1 RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 585-613 MERASE SUBUNIT P3 SWINE/IOWA/15/30) PRRP3_IAZTE RNA-DIRECTED RNA POLY- INFLUENZA A VIRUS (STRAIN A/ 735-769 MERASE SUBUNIT P3 SWINE/TENNESSE/24/77) PRRP3_INBAC RNA-DIRECTED RNA POLY- INFLUENZA B VIRUS (STRAIN B/ 735-769 MERASE SUBUNIT P3 ANN ARBOR/1/66[COLD-ADAPTED]) PRRP3_INBAD RNA-DIRECTED RNA POLY- INFLUENZA B VIRUS (STRAIN B/ 735-769 MERASE SUBUNIT P3 ANN ARBOR/1/66[WILD-TYPE]) PRRP3_INCBE RNA-DIRECTED RNA POLY- INFLUENZA C VIRUS (STRAIN C/ 609-641 MERASE SUBUNIT P3 BERLIN/1/85) PRRP3_INCJJ RNA-DIRECTED RNA POLY- INFLUENZA C VIRUS (STRAIN C/ 609-641 MERASE SUBUNIT P3 JJ/50) PRRP3_THOGV RNA-DIRECTED RNA POLY- THOGOTO VIRUS (THO) 109-145 324-356 MERASE SUBUNIT P3 PRRPA_CVH22 RNA-DIRECTED RNA POLY- HUMAN CORONAVIRUS (STRAIN 229E) 410-443 712-745 1262-1295 1963-1999 2078-2112 2474-2508 3153-3191 MERASE PRRPA_CVMJH RNA-DIRECTED RNA POLY- MURINE CORONAVIRUS MHV (STRAIN JHM) 708-740 3544-3577 3757-3785 3933-3961 MERASE PRRPB_BEV RNA-DIRECTED RNA POLY- BERNE VIRUS (BEV) 941-969 2137-2169 2178-2206 MERASE PRRPB_CVMA5 RNA-DIRECTED RNA POLY- MURINE CORONAVIRUS MHV (STRAIN A59) 346-380 684-714 1689-1722 2698-2730 MERASE PRRPB_CVMJH RNA-DIRECTED RNA POLY- MURINE CORONAVIRUS MHV (STRAIN JHM) 346-380 684-714 1687-1720 2356-2391 2696-2728 MERASE PRRPB_CVPFS RNA-DIRECTED RNA POLY- PORCINE TRANSMISSIBLE 173-207 322-350 482-515 MERASE GASTROENTERITIS CORONAVIRUS PRRPB_CVPR8 RNA-DIRECTED RNA POLY- PORCINE RESPIRATORY CORONAVIRUS  80-113 MERASE PRRPB_IBVB RNA-DIRECTED RNA POLY- AVIAN INFECTIOUS BRONCHITIS VIRUS 636-670 MERASE (STRAIN BEAUDETTE)(IBV) PRRPL_BUNYW RNA POLYMERASE BUNYAMWERA VIRUS 303-331 1096-1128 PRRPL_HANTV RNA POLYMERASE HANTAAN VIRUS (STRAIN 76-118) 1938-1971 (KOREAN HEMORRHAGIC FEVER VIRUS) PRRPL_HRSVA RNA POLYMERASE BETA HUMAN RESPIRATORY 892-922 1181-1213 SUBUNIT SYNCYTIAL VIRUS (STRAIN A2) PRRPL_MABVM RNA-DIRECTED RNA POLY- MARBURG VIRUS (STRAIN MUSOKE) 144-176 698-736 1042-1074 1797-1832 MERASE PRRPL_MABVP RNA-DIRECTED RNA POLY- MARBURG VIRUS (STRAIN POPP) 144-176 698-736 1042-1074 2223-2253 MERASE PRRPL_MEASE RNA POLYMERASE BETA MEASLES VIRUS (STRAIN EDMONSTON) 193-227 647-683 788-825 1160-1192 1886-1914 SUBUNIT PRRPL_MUMPM RNA POLYMERASE BETA MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 1882-1913 SUBUNIT PRRPL_NDVB RNA POLYMERASE BETA NEWCASTLE DISEASE VIRUS (STRAIN 626-661 1571-1603 SUBUNIT BEAUDETTE C/45)(NDV) PRRPL_PI2HT RNA POLYMERASE BETA HUMAN PARAINFLUENZA 2 VIRUS 268-305 558-595 654-688 1562-1599 1881-1912 2025-2053 SUBUNIT (STRAIN TOSHIBA)(PIV-2) PRRPL_PI3H4 RNA POLYMERASE BETA HUMAN PARAINFLUENZA 3 VIRUS 41-76 735-764 784-814 2111-2139 SUBUNIT (STRAIN NIH 47885) PRRPL_RABVP RNA POLYMERASE BETA RABIES VIRUS (STRAIN PV) 60-90 804-837 1365-1394 1930-1962 SUBUNIT PRRPL_RABVS RNA POLYMERASE BETA RABIES VIRUS (STRAIN SAD B19) 60-90 804-837 1365-1394 1930-1962 SUBUNIT PRRPL_RDV RNA-DIRECTED RNA POLY- RICE DWARF VIRUS (RDV) 1293-1323 MERASE PRRPL_RVFVZ RNA-DIRECTED RNA POLY- RIFT VALLEY FEVER VIRUS 1018-1055 2009-2044 MERASE (STRAIN ZH-548 M12)(RVFV) PRRPL_SEND5 RNA POLYMERSE BETA SUBUNIT SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 194-231 233-269 735-764 784-814 2140-2177 PRRPL_SENDE RNA POLYMERSE BETA SUBUNIT SENDAI VIRUS (STRAIN ENDERS) 14-51 53-89 555-584 1927-1955 1960-1997 PRRPL_SENDZ RNA POLYMERSE BETA SUBUNIT SENDAI VIRUS (STRAIN Z) 194-231 233-269 735-764 784-814 2140-2177 PRRPL_SEOU8 RNA-DIRECTED RNA POLY- SEOUL VIRUS (STRAIN 80-39) 394-431 1938-1971 2081-2119 MERASE PRRPL_SV5WR RNA POLYMERSE BETA SUBUNIT SIMIAN VIRUS 5 (STRAIN 21004-WR)(SV5) 557-594 1094-1122 2020-2051 PRRPL_SYNV RNA POLYMERSE BETA SUBUNIT SONCHUS YELLOW NET VIRUS (SYNV) 126-164 605-634 820-856 918-951 1484-1517 PRRPL_TSWVB RNA-DIRECTED RNA POLY- TOMATO SPOTTED WILT VIRUS 43-79 843-880 2266-2298 2369-2403 2481-2511 2805-2840 MERASE (BRAZILIAN ISOLATE CPNH1/BR-01)(TSWV) PRRPL_UUK RNA POLYMERASE UUKUNIEMI VIRUS (UUK) 1017-1051 1147-1177 1293-1321 2060-2095 PRRPL_VSVJH RNA POLYMERSE BETA SUBUNIT VESICULAR STOMATITIS VIRUS 209-246 312-349 1011-1039 1662-1697 1956-1989 PRRPL_VSVJO RNA POLYMERSE BETA SUBUNIT VESICULAR STOMATITIS VIRUS 1011-1039 1956-1989 PRRPL_VSVSJ RNA POLYMERSE BETA SUBUNIT VESICULAR STOMATITIS VIRUS (STRAIN SAN JUAN) 138-171 209-246 312-349 961-999 1011-1039 1739-1772 2051-2087 PRRPO_BWYVF PUTATIVE RNA-DIRECTED BEET WESTERN YELLOWS VIRUS 346-374 RNA POLYMERASE (ISOLATE FL-1)(BWYV) PRRPO_BYDVI PUTATIVE RNA-DIRECTED BARLEY YELLOW DWARF VIRUS 722-755 RNA POLYMERASE (ISOLATE MAV-PSI)(BYDV) PRRPO_BYDVP PUTATIVE RNA-DIRECTED BARLEY YELLOW DWARF VIRUS 722-755 RNA POLYMERASE (ISOLATE PAV)(BYDV) PRRPO_BYDVR PUTATIVE RNA-DIRECTED BARLEY YELLOW DWARF VIRUS 722-755 RNA POLYMERASE (ISOLATE P-PAV)(BYDV) PRRPO_CARMV PROBABLE RNA-DIRECTED CARNATION MOTTLE VIRUS (CARMV)  4-37 RNA POLYMERASE PRRPO_CGMVS PUTATIVE RNA-DIRECTED CUCUMBER GREEN MOTTLE 443-481 725-755 1095-1132 1565-1597 RNA POLYMERASE MOSAIC VIRUS (WATERMELON STRAIN S14) PRRPO_CNV PROBABLE RNA-DIRECTED CUCUMBER NECROSIS VIRUS (CNV) 470-501 RNA POLYMERASE PRRPO_CRM PROBABLE RNA- CYMBIDIUM RINGSPOT VIRUS 28-62 267-300 470-501 DIRECTED RNA POLYMERASE PRRPO_IBDV5 PUTATIVE RNA- AVIAN INFECTIOUS BURSAL 186-218 274-302 DIRECTED RNA POLYMERASE DISEASE VIRUS (STRAIN 52/70)(IBDV) PRRPO_IBDVA PUTATIVE RNA- AVIAN INFECTIOUS BURSAL DISEASE VIRUS 260-288 511-543 599-627 DIRECTED RNA POLYMERASE PRRPO_IPNVJ PUTATIVE RNA- INFECTIOUS PANCREATIC NECROSIS VIRUS 360-390 749-778 DIRECTED RNA POLYMERASE (SEROTYPE JASPER) PRRPO_IPNVS PUTATIVE RNA- INFECTIOUS PANCREATIC NECROSIS VIRUS 360-390 749-778 DIRECTED RNA POLYMERASE (SEROTYPE SP)(IPNV) PRRPO_LYCVA RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 109-137 263-291 2077-2106 (STRAIN ARMSTRONG) PRRPO_LYCVW RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 109-137 (STRAIN WE) PRRPO_MCMV PROBABLE RNA- MAIZE CHLOROTIC MOTTLE VIRUS (MCMV) 16-48 53-81 DIRECTED RNA POLYMERASE PRRPO_PLRV1 PUTATIVE RNA- POTATO LEAFROLL VIRUS (STRAIN 1)(PLRV 576-607 DIRECTED RNA POLYMERASE PRRPO_PLRVW PUTATIVE RNA- POTATO LEAFROLL VIRUS 576-607 DIRECTED RNA POLYMERASE (STRAIN WAGENINGEN)(PLRV) PRRPO_PPMV5 PUTATIVE RNA- PEPPER MILD MOTTLE VIRUS (STRAIN SPAIN)(PPMV) 375-407 702-730 859-891 1069-1106 1533-1565 DIRECTED RNA POLYMERASE PRRPO_RCNMV PUTATIVE RNA- RED CLOVER NECROTIC MOSAIC VIRUS (RCNMV) 278-314 320-353 DIRECTED RNA POLYMERASE PRRPO_REOVJ RNA-DIRECTED RNA REOVIRUS (TYPE 2/STRAIN D5/JONES) 284-315 POLYMERASE PRRPO_ROTBR RNA-DIRECTED RNA BOVINE ROTAVIRUS (STRAIN RF) 25-60 200-231 247-276 POLYMERASE SUBUNIT VPI PRRPO_ROTBU RNA-DIRECTED RNA BOVINE ROTAVIRUS (STRAIN UR) 200-231 247-276 POLYMERASE SUBUNIT VPI PRRPO_ROTPG RNA-DIRECTED RNA PORCINE ROTAVIRUS (STRAIN GOTTFRIED) 200-231 247-276 POLYMERASE SUBUNIT VPI PRRPO_ROTS1 RNA-DIRECTED RNA SIMIAN II ROTAVIRUS (STRAIN SA11) 25-60 200-231 247-276 POLYMERASE SUBUNIT VPI PRRPO_TACV RNA POLYMERASE TACARIBE VIRUS 17-52 109-138 2078-2112 PRRPO_TBSVC PROBABLE RNA-DIRECTED TOMATO BUSHY STUNT VIRUS 470-501 RNA POLYMERASE (STRAIN CHERRY)(TBSV) PRRPO_TCV PROBABLE RNA-DIRECTED TURNIP CRINKLE VIRUS (TCV) 280-318 RNA POLYMERASE PRRPO_TMGMV PUTATIVE RNA-DIRECTED TOBACCO MILD GREEN MOSAIC 67-97 128-159 209-244 376-406 450-483 855-887 1527-1559 RNA POLYMERASE VIRUS (TMV STRAIN U2) PRRPO_TMV PUTATIVE RNA-DIRECTED TOBACCO MOSAIC VIRUS (VULGARE)(TMV) 128-159 376-406 700-728 1533-1565 RNA POLYMERASE PRRPO_TMVKR PUTATIVE RNA-DIRECTED TOBACCO MOSAIC VIRUS (STRAIN KOREAN)(TMV) 128-159 376-406 700-728 1533-1565 RNA POLYMERASE PRRPO_TMVTO PUTATIVE RNA-DIRECTED TOBACCO MOSAIC VIRUS (STRAIN TOMATO/L)(TMV) 128-159 376-406 700-728 857-889 1533-1565 RNA POLYMERASE PRRPO_TNVA RNA-DIRECTED RNA TOBACCO NECROSIS VIRUS (STRAIN A)(TNV) 231-263 POLYMERASE PRRPO_TNVD RNA-DIRECTED RNA TOBACCO NECROSIS VIRUS (STRAIN D)(TNV)  5-40 234-270 POLYMERASE PRRPP_CDVO RNA POLYMERASE ALPHA CANINE DISTEMPER VIRUS 295-332 SUBUNIT (STRAIN ONDERSTEPOORT)(CDV) PRRPP_MEASE RNA POLYMERASE ALPHA MEASLES VIRUS (STRAIN EDMONSTON) 295-332 SUBUNIT PRRPP_MEAS1 RNA POLYMERASE ALPHA MEASLES VIRUS (STRAIN IP-3-CA) 295-332 SUBUNIT PRRPP_MEASY RNA POLYMERASE ALPHA MEASLES VIRUS (STRAIN YAMAGATA-1) 295-332 SUBUNIT PRRPP_MUMP1 RNA POLYMERASE ALPHA MUMPS VIRUS (STRAIN SBL-1) 211-248 SUBUNIT PRRPP_MUMPE RNA POLYMERASE ALPHA MUMPS VIRUS (STRAIN ENDERS) 212-249 SUBUNIT PRRPP_MUMPM RNA POLYMERASE ALPHA MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 212-249 SUBUNIT PRRPP_NDVA RNA POLYMERASE ALPHA NEWCASTLE DISEASE VIRUS (STRAIN 220-255 SUBUNIT AUSTRALIA-VICTORIA/32)(NDV) PRRPP_NDVB RNA POLYMERASE ALPHA NEWCASTLE DISEASE VIRUS 220-255 SUBUNIT (STRAIN BEAUDETTE C/45)(NDV) PRRPP_P12H RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS (PIV-2 216-253 SUBUNIT PRRPP_P12HT RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 216-253 SUBUNIT (STRAIN TOSHIBA)(PIV-2) PRRPP_P14HA RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 4A VIRUS 220-257 332-364 SUBUNIT (STRAIN TOSHIBA)(PIV-4A) PRRPP_P14HB RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 4B VIRUS 220-257 332-364 SUBUNIT (STRAIN 68-333)(PIV-4B) PRRPP_PIRYV RNA POLYMERASE ALPHA PIRY VIRUS 134-168 SUBUNIT PRRPP_RABVA RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN AVO1) 216-244 SUBUNIT PRRPP_RABVC RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN CVS-11) 216-244 SUBUNIT PRRPP_RABVE RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN ERA), 216-244 SUBUNIT AND RABIES VIRUS (STRAIN PM) PRRPP_RABVP RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN PV)  89-122 216-244 SUBUNIT PRRPP_RABVS RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN SAD B19) 216-244 SUBUNIT PRRPP_SEND5 RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 530-566 SUBUNIT PRRPP_SEND6 RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN 6/94) 530-566 SUBUNIT PRRPP_SENDF RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN FUSHIMI) 530-566 SUBUNIT PRRPP_SENDH RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN HARRIS) 530-566 SUBUNIT PRRPP_SENDZ RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN Z) 530-566 SUBUNIT PRRPP_SV5 RNA POLYMERASE ALPHA SIMIAN VIRUS 5 (STRAIN W3)(SV5) 199-236 SUBUNIT PRRPP_VSVJM RNA POLYMERASE VESICULAR STOMATITIS VIRUS 198-230 ALPHA SUBUNIT (SEROTYPE NEW JERSEY/STRAIN MISSOUR PRRPP_VSVJO RNA POLYMERASE VESICULAR STOMATITIS VIRUS 197-230 ALPHA SUBUNIT (SEROTYPE NEW JERSEY/STRAIN OGDEN) PSODC_VACCC SUPEROXIDE DISMUTASE VACCINIA VIRUS (STRAIN COPENAGEN) 19-55 LIKE PROTEIN PSODC_VACCV SUPEROXIDE DISMUTASE VACCINIA VIRUS (STRAIN WR) 19-55 LIKE PROTEIN PSODC_VARV SUPEROXIDE DISMUTASE VARIOLA VIRUS 19-55 LIKE PROTEIN PSPHR_AMEPV SHEROIDIN AMSACTA MOOREIENTOMOPOXVIRUS (AMEPV) 58-86 138-172 627-659 671-701 PSPI1_MYXVL SERPIN 1 MYXOMA VIRUS (STRAIN LAUSANNE) 167-200 PSPI3_VACCC SERINE PROTEINASE INHIBITOR 3 VACCINIA VIRUS (STRAIN COPENHAGEN) 112-140 PSPI3_VACCV SERINE PROTEINASE INHIBITOR 3 VACCINIA VIRUS (STRAIN WR) 112-140 PSPI3_VARV SERINE PROTEINASE INHIBITOR 3 VARIOLA VIRUS 116-144 PIAG8_FOWPV TRANS-ACTIVATOR PROTEIN FP0 FOWLPOX VIRUS 199-230 PTALA_BFDV LARGE T ANTIGEN BUDGERIGAR FLEDGLING DISEASE VIRUS (BFDV)  99-129 172-210 461-491 PTAMI_POVHA MIDDLE T ANTIGEN HAMSTER POLYOMAVIRUS 106-138 PTAMI_POVM3 MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN 3) 43-80 PTAMI_POVMA MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN A2) 43-80 PTAMI_POVMC MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN 43-80 CRAWFORD SMALL-PLAQUE) PTASM_POVBA SMALL T ANTIGEN POLYOMAVIRUS BK (STRAIN AS) 130-162 PTASM_POVBK SMALL T ANTIGEN POLYOMAVIRUS BK 130-162 PTASM_POVHA SMALL T ANTIGEN HAMSTER POLYOMAVIRUS 106-138 PTASM_POVMA SMALL T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN A2) 43-80 PTASM_SV40 SMALL T ANTIGEN SIMIAN VIRUS 40 (SV40) 132-164 PTEGU_EBV LARGE TEGUMENT PROTEIN EPSTEIN-BARR VIRUS 143-173 1469-1503 1791-1819 3102-3137 (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PTEGU_HCMVA PROBABLE LARGE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 161-192 699-736 812-840 2199-2228 TEGUMENT PROTEIN PTEGU_HSV6G LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 222-259 566-601 615-643 1436-1469 2037-2072 PTEGU_HSVEB LARGE TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 265-297 569-589 1072-1106 3363-3392 PTEGU_HSVSA PROBABLE LARGE HERPESVIRUS SAIMIRI (STRAIN 11) 467-505 714-751 823-861 926-960 1503-1536 2421-2457 TEGUMENT PROTEIN PTERM_ADE07 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 7 369-400 PTMAF_AVIS4 TRANSFORMING PROTEIN MAP AVIAN MUSCULOAPONEUROTIC 230-267 FIBROSARCOMA VIRUS A542 PTOP2_ASFB7 DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 119-153 1105-1142 PTOP2_ASFM2 DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS 119-153 1104-1141 (ASFV)(ISOLATE MALAWILIL 20/1)(ASFV) PTREL_AVIRE REL TRANSFORMING PROTEIN AVIAN RETICULOENDOTHELIOSIS VIRUS 189-226 PTYSY_V2VD THYMIDYLATE SYNTHASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 121-156 PUIL_HSV6U PROTEIN IL HERPES SIMPLEX VIRUS (TYPE 6/ 171-203 STRAIN UGANDA-1102) PUDPE_NPVAC ECDYSTEROID UDP-GLUCOS- AUTOGRAPHA CALIFORNICA NUCLEAR POLY- 185-219 387-425 452-484 YLTRANSFERASE PRECURSO HEDROSIS VIRUS (ACMNPV) PUL02_HCMVA HYPOTHETICAL PROTEIN UL2 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 25-59 PUL06_EBV VIRION PROTEIN BDRF1 EPSTEIN-BARR VIRUS (STRAIN 355-386 B95-8)(HUMAN HERPESVIRUS 4) PUL06_HSVI1 VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 404-436 PUL06_HSVEB VIRION GENE 56 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 222-251 437-475 PUL06_HSVSA VIRION GENE 43 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 299-330 PUL06_VZVD VIRION GENE 54 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 223-252 502-530 PUL07_HCMVA HYPOTHETICAL PROTEIN UL7 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 186-216 PUL07_HSVEB GENE 55 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) Nov-39 PUL08_HCMVA HYPOTHETICAL PROTEIN UL8 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 65-96 PUL08_HSVI1 PROTEIN UL8 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 614-648 PUL08_VZVD GENE 52 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 227-255 PUL09_HSVI1 ORIGIN OF REPLICATION HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 678-713 BINDING PROTEIN PUL09_VZVD ORIGIN OF REPLICATION VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 168-204 BINDING PROTEIN PUL14_PRVN3 UL14 PROTEIN HOMOLOG PSEUDORABIES VIRUS (STRAIN NIA-3)(PRV) 40-76 PUL16_H5VI1 PROTEIN UL16 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 22-52 PUL17_HSV6U PROTEIN 10R HERPES SIMPLEX VIRUS (TYPE 302-339 6/STRAIN UGANDA-1102) PUL21_HSVEB GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 294-328 PUL21_PRVN3 PROTEIN UL21 HOMOLOG PSEUDORABIES VIRUS (STRAIN NIA-3)(PRV) 242-271 PUL21_VZVD GENE 38 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 56-92 375-412 PUL24_HCMVA HYPOTHETICAL PROTEIN UL24 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 52-87 PUL24_ILTVT PROTEIN UL24 HOMOLOG INFECTIOUS LARYNGOTRACHEITIS 158-196 VIRUS (STRAIN THORNE V882) PUL25_HSVEB VIRION PROTEIN UL25 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 343-379 PUL25_HSVSA VIRION GENE 19 PROTEIN HERPES VIRUS SAIMIRI (STRAIN 11) 290-323 PUL25_VZVD VIRION GENE 34 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 540-571 PUL28_HCMVA HYPOTHETICAL PROTEIN UL28 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 287-316 PUL31_HCMVA HYPOTHETICAL PROTEIN UL31 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 464-501 PUL31_HSVA GENE 69 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 163-197 PUL32_EBV PROBABLE MAJOR ENVELOPE EPSTEIN-BARR VIRUS 367-405 GLYCOPROTEIN BFLF1 (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PUL32_HSVI1 PROBABLE MAJOR ENVELOPE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 404-438 564-592 GLYCOPROTEIN UL32 PUL32_HSVEB MAJOR ENVELOPE GLYCO- EQUINE HERPESVIRUS TYPE 1  81-115 PROTEIN 300 PUL32_HSVSA PROBABLE MAJOR HERPESVIRUS SAIMIRI (STRAIN 11) 276-307 ENVELOPE GLYCOPROTEIN 68 PUL32_VZVD PROBABLE MAJOR ENVELOPE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 553-581 GLYCOPROTEIN 26 PUL34_HSVSA GENE 67 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  98-130 PUL35_HCMVA HYPOTHETICAL PROTEIN UL35 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 138-169 PUL36_HCMVA HYPOTHETICAL PROTEIN UL36 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 186-223 PUL37_EBV PROTEIN BOLF1 EPSTEIN-BARR VIRUS (STRAIN  85-123 B95-8)(HUMAN HERPESVIRUS 4) PUL37_HSVEB GENE 23 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 702-732 778-812 PUL37_HSVSA GENE 63 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 566-602 PUL37_VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 598-629 706-736 776-806 PUL38_HCMVA HYPOTHETICAL PROTEIN UL38 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 157-188 PUL41_VZVD HOST SHUTOFF VIRION PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 274-307 PUL43_HSVI1 MEMBRANE PROTEIN UL43 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 41-70 PUL45_HSVI1 GENE 15 MEMBRANE PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 34-64 277-308 PUL47_HCMVA PROTEIN UL47 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 438-471 741-777 PUL47_HSVE4 97 KD ALPHA TRANS- EQUINE HERPESVIRUS TYPE 4 580-615 INDUCING PROTEIN PUL47_HSVEB 97 KD ALPHA TRANS- EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 587-622 INDUCING PROTEIN PUL49_HSVI1 TEGUMENT PROTEIN UL49 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17 226-259 PUL49_HSVBP TEGUMENT PROTEIN UL49 BOVINE HERPESVIRUS 135-168 HOMOLOG TYPE 1 (STRAIN P8-2) PUL52_EBV PROBABLE DNA REPLI- EPSTEIN-BARR VIRUS (STRAIN 582-617 CATION PROTEIN BSLF1 B95-8)(HUMAN HERPESVIRUS 4) PUL52_HSVI1 DNA REPLICATION PROTEIN UL52 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 599-629 771-805 PUL52_HSVEB DNA REPLICATION PROTEIN UL52 EQUNE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 316-344 580-618 912-947 PUL52_HSVSA PROBABLE DNA REPLI- HERPESVIRUS SAIMIRI (STRAIN 11) 229-267 374-411 CATION GENE 56 PROTEIN PUL53_HCMVA PROTEIN UL53 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 213-248 PUL53_HSV6U UL53 PROTEIN HOMOLOG HERPES SIMPLEX VIRUS 105-139 (TYPE 67 STRAIN UGANDA-1102) PUL60_HCMVA HYPOTHETICAL PROTEIN UL60 HUMAN CYTOMEGALOVIRUS (STRAIN AD169 120-148 PUL70_HCMVA PROBABLE REPLICATION HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 36-65 626-664 PROTEIN UL70 PUL77_HCMVA VIRION PROTEIN UL77 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 381-413 565-598 PUL78_HCMVA HYPOTHETICAL PROTEIN UL78 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 262-290 303-341 PUL79_HSVSA HYPOTHETICAL GENE 18 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 158-195 PUL87_HSV6U HYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS 130-159 (TYPE 6/STRAIN UGANDA-1102) PUL87_HSVSA HYPOTHETICAL GENE 24 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 322-355 PUL88_HCMVA HYPOTHETICAL PROTEIN UL88 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 309-337 PUL88_HSV6U HYPOTHETICAL PROTEIN 6R HERPES SIMPLEX VIRUS (TYPE 150-187 238-272 6/STRAIN UGANDA-1102) PUL91_HSVSA HYPOTHETICAL GENE 30 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 23-53 PUL92_EBV HYPOTHETICAL PROTEIN BDLF4 EPSTEIN-BARR VIRUS 106-144 (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PUL92_HSVSA HYPOTHETICAL GENE 31 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 123-157 PUL93_HDMVA PROTEIN UL93 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 387-420 PUL95_EBV HYPOTHETICAL PROTEIN BGLF3 EPSTEIN-BARR VIRUS (STRAIN 111-145 B95-8)(HUMAN HERPESVIRUS 4) PULB8_HCMVA HYPOTHETICAL PROTEIN UL118 HUMAN CYTOMEGALOVIRUS (STRAIN AD169 102-130 152-181 PULC1_HCMVA HYPOTHETICAL PROTEIN UL121 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 129-165 PULC8_HCMVA HYPOTHETICAL PROTEIN UL128 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 64-96 PULC9_HCMVA HYPOTHETICAL PROTEIN UL129 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 66-99 PULD0_HCMVA HYPOTHETICAL PROTEIN UL130 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  81-114 PUNG_EBV URACIL-DNA GLYCOSYLASE EPSTEIN-BARR VIRUS (STRAIN 159-189 B95-8)(HUMAN HERPESVIRUS 4) PUNG_VACCC URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN COPENHAGEN)  82-117 PUNG_VACCV URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN WR)  82-117 PUNG_VARV URACIL-DNA GLYCOSYLASE VARIOLA VIRUS  82-117 PUS02_HCMVA HYPOTHETICAL PROTEIN HOLF2 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 43-73 PUS07_HCMVA HYPOTHETICAL PROTEIN HXLF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 153-190 PUS09_HCMVA HYPOTHETICAL PROTEIN HXLF3 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 179-213 PUS10_HCMVA HYPOTHETICAL PROTEIN HXLF2 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 137-170 PUS12_HCMVA HYPOTHETICAL PROTEIN HVLF6 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 29-67 113-142 PUS13_HCMVA HYPOTHETICAL PROTEIN HVLF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 11-45 PUS15_HCMVA HYPOTHETICAL PROTEIN HVLF3 HUMAN CYTOMEGALOVIRUS (STRAIN AD169 343-375 PUS16_HCMVA HYPOTHETICAL PROTEIN HVLF2 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 151-188 243-274 PUS18_HCMVA MEMBRANE PROTEIN HWLF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 185-222 PUS22_HCMVA EARLY NUCLEAR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 270-299 PROTEIN HWLF1 PUS26_HCMVA HYPOTHETICAL PROTEIN HHLF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169 132-164 PUS27_HCMVA G-PROTEIN COUPLED HUMAN CYTOMEGALOVIRUS (STRAIN AD169 247-285 RECEPTOR HOMOLOG US27 PUS29_HCMVA HYPOTHETICAL PROTEIN HHRF4 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 246-276 PUS30_HCMVA HYPOTHETICAL PROTEIN HHRF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 208-246 PV125_AMVLE 125 KD PROTEIN ALFALFA MOSAIC VIRUS 263-292 (STRAIN 425/ISOLATE LEIDEN PV13K_TRVPL 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PLB) 24-62 PV143_NPVAC HELICASE AUTOGRAPHA CALIFORNICA 312-342 NUCLEAR POLYHEDROSIS VIRUS PV17K_BSMV 17 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS (BSMV) 40-75 PV1A_CMVFN 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY)(CMV) 674-709 PV270_ASFB7 L270 PROTEIN AFRICAN SWINE FEVER VIRUS 103-135 (STRAIN BA71V)(ASFV) PV2A_BBMV 2A PROTEIN BROAD BEAN MOTTLE VIRUS 636-673 PV2A_CCMV 2A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS (CCMV) 325-363 639-673 762-799 PV2A_CMVFN 2A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY)(CMV) 208-243 292-320 PV2A_CMVQ 2A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Q)(CMV) 205-240 PV2A_TAV 2A PROTEIN TOMATO ASPERMY VIRUS (TAV) 297-325 PV30K_TRVTC 29.1 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 102-133 PV3A_BBMV 3A PROTEIN BROAD BEAN MOTTLE VIRUS 155-187 PV3A_BMV 3A PROTEIN BROME MOSAIC VIRUS (BMV) 159-189 PV3A_CCMV 3A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS (CCMV) 160-188 PV3A_IBVB 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS  5-43 VIRUS (STRAIN BEAUDETTE)(IBV) PV3A_IBVM 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS  5-42 VIRUS (STRAIN M41)(IBV) PV3A_IBVP3 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS  5-42 PV3A_IBVU5 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS  5-42 (STRAIN UK/183/66)(IBV) PV51K_ACLSV 50.8 KD PROTEIN APPLE CHLOROTIC LEAF SPOT VIRUS (ACLSV)  70-106 PV51K_BWYVF 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS 366-398 (ISOLATE FL-1)(BWYV) PV51K_BWYVG 51 KD PROTEIN BEET WESTERN YELLOWS 366-398 VIRUS (ISOLATE GB1)(BWYV) PV56K_PLRV1 56 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1)(PLRV) 360-392 PV56K_PLRVW 56 KD PROTEIN POTATO LEAFROLL VIRUS 360-392 (STRAIN WAGENINGEN)(PLRV) PV58K_BSMV 58 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS (BSMV) 320-353 PV70K_PLRV1 69.7 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1)(PLRV) 220-257 PV70K_PLRVW 69.7 KD PROTEIN POTATO LEAFROLL VIRUS 220-257 (STRAIN WAGENINGEN)(PLRV) PV90K_AMVLE 90 KD PROTEIN ALFALFA MOSAIC VIRUS 103-131 (STRAIN 425/ISOLATE LEIDEN) PVA04_VACCC PROTEIN A4 VACCINIA VIRUS (STRAIN COPENHAGEN) 217-251 PVA04_VACCV PROTEIN A4 VACCINIA VIRUS (STRAIN WR) 217-251 PVA04_VARV PROTEIN A4 VARIOLA VIRUS 207-241 PVA11_VACCC PROTEIN A11 VACCINIA VIRUS (STRAIN COPENHAGEN)  95-132 PVA11_VARV PROTEIN A11 VARIOLA VIRUS  96-133 PVA18_VACCC 56 KD ABORTIVE LATE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 390-421 PVA18_VACCV 56 KD ABORTIVE LATE PROTEIN VACCINIA VIRUS (STRAIN WR) 390-421 PVA18_VARV 56 KD ABORTIVE LATE PROTEIN VARIOLA VIRUS 390-421 PVA23_VACCC PROTEIN A23 VACCINIA VIRUS (STRAIN COPENHAGEN)  81-111 170-203 PVA23_VARV PROTEIN A23 VARIOLA VIRUS  81-111 170-203 PVA31_VACCC PROTEIN A31 VACCINIA VIRUS (STRAIN COPENHAGEN) 42-76 PVA13_VACCV PROTEIN A31 VACCINIA VIRUS (STRAIN WR) 42-76 PVA31_VARV PROTEIN A31 VARIOLA VIRUS 42-76 PVA32_VACCV PROTEIN A32 VACCINIA VIRUS (STRAIN WR), AND VACCINIA 48-79 VIRUS (STRAIN COPENHAG PVA32_VARV PROTEIN A32 VARIOLA VIRUS 18-49 PVA40_VACCC PROTEIN A40 VACCINIA VIRUS (STRAIN COPENHAGEN)  4-37 PVA43_VACCC PROTEIN A43 VACCINIA VIRUS (STRAIN COPENHAGEN)  94-129 PVA43_VACCV PROTEIN A43 VACCINIA VIRUS (STRAIN WR)  94-129 PVA43_VARV PROTEIN A43 VARIOLA VIRUS  95-130 PVA51_VACCC PROTEIN A51 VACCINIA VIRUS (STRAIN COPENHAGEN) 109-143 PVA51_VACCV PROTEIN A51 VACCINIA VIRUS (STRAIN WR) 109-143 PVAL1_BCV AL1 PROTEIN BEET CURLY TOP VIRUS (BCTV)  89-118 PVAL1_BGMV AL1 PROTEIN BEAN GOLDEN MOSAIC VIRUS  89-118 PVAL1_CLVK AL1 PROTEIN CASSAVA LATENT VIRUS  88-117 (STRAIN WEST KENYAN 844 PVAL1_CLVN AL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN NIGERIAN)  88-117 PVAL1_PYMVV AL1 PROTEIN POTATO YELLOW MOSAIC  89-118 VIRUS (ISOLATE VENEZUELA) PVAL1_TGMV AL1 PROTEIN TOMATO GOLDEN MOSAIC VIRUS (TGMV)  90-119 PVAL1_TYLCM AL1 PROTEIN TOMATO YELLOW LEAP CURL VIRUS  89-118 (STRAIN MARMANDE)(TYLCV) PLAL1_TYLCV AL1 PROTEIN TOMATO YELLOW LEAP CURL VIRUS (TYLCV)  87-116 PVAL3_BCTV AL3 PROTEIN BEET CURLY TOP VIRUS (BCTV)  82-115 PVAL3_CLVK AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN  77-113 WEST KENYAN 844) PVAL3_CLVN AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN NIGERIAN)  77-113 PVAL3_TYLCM AL3 PROTEIN TOMATO YELLOW LEAF CURL  78-116 VIRUS (STRAIN MARMANDE)(TYLCV) PVAL3_TYLCV AL3 PROTEIN TOMATO YELLOW LEAF CURL VIRUS (TYLCV  77-113 PVAT_CAMVC APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 20-53  81-116 (STRAIN CM-1841)(CAMV) PVAT_CAMVD APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H)(CAMV 20-53 102-130 PVAT_CAMVE APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC)(CAMV) 20-53  81-116 PVAT_CAMVN APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 20-53  81-116 (STRAIN NY8153)(CAMV) PVAT_CAMVP APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 20-53  81-116 (STRAIN PV147)(CAMV) PVAT_CAMVS APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 20-53  81-116 (STRAIN STRASBOURG)(CAMV) PVB04_VACCC PROTEIN B4 VACCINIA VIRUS (STRAIN COPENHAGEN) 124-156 489-525 PVB04_VACCV PROTEIN B4 VACCINIA VIRUS (STRAIN WR) 124-156 489-525 PVB04_VARV PROTEIN B4 VARIOLA VIRUS 489-525 PVB16_COWPX INTERLEUKIN-1 BINDING COWPOX VIRUS (CPV)  89-126 PROTEIN PRECURSOR PVB16_VACCV INTERLEUKIN-1 BINDING VACCINIA VIRUS (STRAIN WR)  89-126 PROTEIN PRECURSOR PVB19_VACCC SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 213-244 PVB19_VACCD SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN DAIREN 1) 211-242 PVB19_VACCV SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN WR) 211-242 PVB19_VARV SURFACE ANTIGEN S PRECURSOR VARIOLA VIRUS 211-242 PVBR1_BGMV BR1 PROTEIN BEAN GOLDEN MOSAIC VIRUS 166-198 PVC03_SFVKA G-PROTEIN COUPLED SHOPE FIBROMA VIRUS (STRAIN KASZA)(SFV)  98-130 RECEPTOR HOMOLOG C3 PVC04_VACCC PROTEIN C4 VACCINIA VIRUS (STRAIN COPENHAGEN) 109-139 182-216 PVC04_VACCV PROTEIN C4 VACCINIA VIRUS (STRAIN WR) 109-139 183-215 PVC04_VARV PROTEIN C4 VARIOLA VIRUS 109-139 PVC06_VACCC PROTEIN C6 VACCINIA VIRUS (STRAIN COPENHAGEN) 36-67 PVC06_VACCV PROTEIN C6 VACCINIA VIRUS (STRAIN WR) 36-67 PVC06_VARV PROTEIN C6 VARIOLA VIRUS 36-67 PVC07_SFVKA HYPOTHETICAL PROTEIN C7 SHOPE FIBROMA VIRUS (STRAIN KASZA)(SFV) 60-97 PVC09_VACCC PROTEIN C9 VACCINIA VIRUS (STRAIN COPENHAGEN) 573-610 PVC09_VACCV PROTEIN C9 VACCINIA VIRUS (STRAIN WR) 573-610 PVC10_SFVKA HYPOTHETICAL PROTEIN C10 SHOPE FIBROMA VIRUS (STRAIN KASZA)(SFV)  85-121 PVC10_VACCC PROTEIN C10 VACCINIA VIRUS (STRAIN COPENHAGEN) 121-158 PVC10_VACCV PROTEIN C10 VACCINIA VIRUS (STRAIN WR) 121-158 PVC10_VARV PROTEIN C10 VARIOLA VIRUS 121-158 PVC21_VACCC PROTEIN C21/B27 VACCINIA VIRUS (STRAIN COPENHAGEN)  3-34 PVCAP_EBV MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 148-183 200-230 (HUMAN HERPESVIRUS 4) PVCAP_HCMVA MAJOR CAPSID PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 43-78 128-161 258-286 PVCAP_HSVI1 MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 19-49 PVCAP_HSV6U MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS 124-161 666-696 841-869 (TYPE 6/STRAIN UGANDA-1102) PVCAP_HSVEB MAJOR CAPSID PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 17-54 198-232 272-301 PVCAP_HSVSA MAJOR CAPSID PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 144-179 196-226 734-769 1062-1096 PVCAP_PRVIS MAJOR CAPSID PROTEIN PSEUDORABIES VIRUS (STRAIN INDIANA S)(PRV) 189-221 260-289 PVCAP_VZVD MAJOR CAPSID PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 31-68 PVCOM_ADE02 MINOR CORE PROTEIN HUMAN ADENOVIRUS TYPE 2  86-115 PVCOM_ADE05 MINOR CORE PROTEIN HUMAN ADENOVIRUS TYPE 5  85-114 PVD03_VACCC PROTEIN D3 VACCINIA VIRUS (STRAIN COPENHAGEN) 12-50 146-182 PVD03_VACCV PROTEIN D3 VACCINIA VIRUS (STRAIN WR) 12-50 146-182 PVD03_VARV PROTEIN D3 VARIOLA VIRUS 12-50 146-182 PVD05_FOWP1 92.6 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 315-352 PVD05_VACCC PROTEIN D5 VACCINIA VIRUS (STRAIN COPENHAGEN) 320-348 PVD05_VACCV PROTEIN D5 VACCINIA VIRUS (STRAIN WR) 320-348 PVD05_VARV PROTEIN D5 VARIOLA VIRUS 320-348 PVD10_FOWP1 PROTEIN D10 FOWLPOX VIRUS (STRAIN FP-1) 114-143 PVE05_VACCD PROTEIN E5 VACCINIA VIRUS (STRAIN DAIREN 1) 31-60 PVE06_VACCC PROTEIN E6 VACCINIA VIRUS (STRAIN COPENHAGEN) 226-260 430-458 511-540 PVE06_VACCV PROTEIN E6 VACCINIA VIRUS (STRAIN WR) 226-260 430-458 511-540 PVE06_VARV PROTEIN E6 VARIOLA VIRUS 430-458 511-540 PVE10_VACCC PROTEIN E10 VACCINIA VIRUS (STRAIN COPENHAGEN)  3-41 PVE10_VACCV PROTEIN E10 VACCINIA VIRUS (STRAIN WR)  3-41 PVE10_VARV PROTEIN E10 VARIOLA VIRUS  3-41 PVE12_HPV16 PROBABLE E1 PROTEIN 2 HUMAN PAPILLOMAVIRUS TYPE 16 102-131 PVE18_NPVAC EARLY 18.5 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 45-77 POLYHEDROSIS VIRUS (ACMNPV) PVE1_HPV05 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5  4-35 PVE1_HPV11 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11 258-291 PVE1_HPV13 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 13 255-288 PVE1_HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 238-267 519-547 PVE1_HPV35 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 230-263 PVE1_HPV39 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 242-271 PVE1_HPV31 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 105-138 193-231 PVE1_HPV58 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 238-267 PVE1_HPV5B E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B  6-35 PVE1_HPV6B E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B 258-291 PVE1_PAPVD E1 PROTEIN DEER PAPILLOMAVIRUS 163-201 PVE1_PCPV1 E1 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS TYPE 1 257-290 PVE26_NPVAC EARLY 25.9 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 118-150 POLYHEDROSIS VIRUS (ACMNPV) PVE2_HPV57 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57 151-182 PVE2_RHPV1 E2 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1 (RHPV 1) 117-147 PVE41_NPVAC EARLY 40.9 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 14-52 POLYHEDROSIS VIRUS (ACMNPV) PVE5A_HPV11 PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11 19-56 PVE5A_HPV6B PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B 19-56 PVE5A_HPV6C PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6C 19-56 PVE5_HPV13 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 13 19-56 PVE5_HPV5B PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B  89-118 PVE5_PCPV1 PROBABLE E5 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS TYPE 1 21-58 PVE5_RHPV1 PROBABLE E5 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1 (RHPV 1) 109-140 PVE6_HPV1A E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A  91-128 PVE7_HPV05 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5 55-90 PVE7_HPV08 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 55-90 PVE7_HPV11 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11 47-83 PVE7_HPV16 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 16 47-83 PVE7_HPV1A E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 45-77 PVE7_HPV31 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 47-83 PVE7_HPV33 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 47-83 PVE7_HPV35 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 48-84 PVE7_HPV41 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 63-94 PVE7_HPV47 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 55-90 PVE7_HPV51 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 61-94 PVE7_HPV58 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 48-84 PVE7_HPV5B E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 55-90 PVE7_HPV6B E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B 47-83 PVE7_PAPVD E7 PROTEIN DEEP PAPILLOMAVIRUS 48-86 PVE7_PAPVE E7 PROTEIN EUROPEAN ELK PAPILLOMAVIRUS (EEPV) 60-93 PVE94_NPVAC EARLY 94 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 123-157 650-678 POLYHEDROSIS VIRUS (ACMNPV) PVEF_GVTN VIRAL ENHANCING FACTOR TRICHOPLUSIA N1 GRANULOSIS VIRUS (TNGV) 154-182 PVENV_BEV ENVELOPE PROTEIN BERNE VIRUS (BEV) 16-51  87-117 PVENV_DHV11 ENVELOPE GLYCOPROTEIN DHORI VIRUS (STRAIN INDIAN/1313/61)(DHO) 297-335 PRECURSOR PVENV_MCV1 MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOUSUM 203-236 VIRUS SUBTYPE 1 (MCV1) PVENV_MCV2 MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOUSUM 203-236 VIRUS SUBTYPE 2 (MCV11) PVENV_VACCC MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 208-241 PVENV_VACCI MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN 1HD-J) 208-241 PVENV_VACCP MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN L-IVP) 208-241 PVENV_VACCV MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN WR) 208-241 PVENV_VARV MAJOR ENVELOPE PROTEIN VARJOLA VIRUS 155-187 208-241 PVF03_VACCC PROTEIN F3 VACCINIA VIRUS (STRAIN COPENHAGEN)  2-40 61-93 PVF03_VACCV PROTEIN F3 VACCINIA VIRUS (STRAIN WR)  2-40 61-93 PVFP1_FOWPV PROTEIN FP1 FOWLPOX VIRUS 297-330 PVFP4_FOWPV PROTEIN FP4 FOWLPOX VIRUS 237-267 PVFP7_CAPVK PROTEIN F7 CAPRIPOX VIRUS (STRAIN K5-1)  89-118 PVFUS_VACCC 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 28-61 PVFUS_VACCV 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAIN WR) 28-61 PVFUS_VARV 14 KD FUSION PROTEIN VARJOLA VIRUS 28-61 PVG01_HSV11 HYPOTHETICAL GENE 1 PROTEIN ICTALURID HERPESVIRUS 1 317-346 (CHANNEL CATFISH VIRUS)(CCV) PVG02_HSVEB HYPOTHETICAL GENE 2 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 163-196 PVG02_VACCV ISATIN-BETA-THIOSEM- VACCINIA VIRUS (STRAIN WR), AND VACCINIA  92-120 ICARBAZONE DEPENDENT PROTEI VIRUS (STRAIN COPENHAGE PVG02_VARV ISATIN-BETA-THIOSEM- VARJOLA VIRUS  92-120 ICARBAZONE DEPENDENT PROTEI PVG03_HSVI1 HYPOTHETICAL GENE 3 PROTEIN ICTALURID HERPESVIRUS 1 108-136 (CHANNEL CATFISH VIRUS)(CCV) PVG06_HSVI1 HYPOTHETICAL GENE 6 ICTALURID HERPESVIRUS 1 54-83 MEMBRANE PROTEIN (CHANNEL CATFISH VIRUS)(CCV) PVG06_VACCC PROTEIN G6 VACCINIA VIRUS (STRAIN COPENHAGEN)  99-136 PVG06_VARV PROTEIN G6 VARJOLA VIRUS  99-136 PVG07_VACCC PROTEIN G7 VACCINIA VIRUS (STRAIN COPENHAGEN) 113-145 PVG07_VARV PROTEIN G7 VARJOLA VIRUS 113-145 PVG09_VACCC PROTEIN F1 VACCINIA VIRUS (STRAIN COPENHAGEN) 303-338 PVG09_VACCV PROTEIN F1 VACCINIA VIRUS (STRAIN WR) 266-301 PVG09_VARV PROTEIN F1 VARJOLA VIRUS 303-338 PVG11_HSV11 HYPOTHETICAL GENE 11 ICTALURID HERPESVIRUS 1 150-183 ZINC-BINDING PROTEIN (CHANNEL CATFISH VIRUS)(CCV) PVG12_HSV11 HYPOTHETICAL GENE 12 ICTALURID HERPESVIRUS 1 206-243 ZINC-BINDING PROTEIN (CHANNEL CATFISH VIRUS)(CCV) PVG12_HSVSA HYPOTHETICAL GENE 12 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  68-106 PVG1_SPVIR CAPSID PROTEIN SPIROPLASMA VIRUS SPVI-R8A2 B 254-292 303-337 414-452 PVG22_HSV11 HYPOTHETICAL GENE 22 PROTEIN ICTALURID HERPESVIRUS 1 300-337 647-678 (CHANNEL CATFISH VIRUS)(CCV) PGV23_HSV11 HYPOTHETICAL GENE 23 PROTEIN ICTALURID HERPESVIRUS 1  70-108 (CHANNEL CATFISH VIRUS)(CCV) PVG26_HSV11 HYPOTHETICAL GENE 26 PROTEIN ICTALURID HERPESVIRUS 1  94-125 (CHANNEL CATFISH VIRUS)(CCV) PVG27_HSVSA HYPOTHETICAL GENE 27 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 36-74 PVG28_HSV11 HYPOTHETICAL GENE 28 PROTEIN ICTALURID HERPESVIRUS 1 491-521 (CHANNEL CATFISH VIRUS)(CCV) PVG2R_AMEPV HYPOTHETICAL G2R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 180-217 PVG2_SPV4 GENE 2 PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 209-244 PVG35_HSV11 HYPOTHETICAL GENE 35 PROTEIN ICTALURID HERPESVIRUS 1 15-46 190-226 (CHANNEL CATFISH VIRUS)(CCV) PVG36_HSVSA POSSIBLE TYROSINE HERPESVIRUS SAIMIRI (STRAIN 11) 151-185 -PROTEIN KINASE PVG39_HSV11 HYPOTHETICAL GENE 39 PROTEIN ICTALURID HERPESVIRUS 1 543-577 648-682 (CHANNEL CATFISH VIRUS)(CCV) PVG40_HSVSA HYPOTHETICAL GENE 40 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 187-216 PVG41_HSV11 HYPOTHETICAL GENE 41 PROTEIN ICTALURID HERPESVIRUS 1 11-45 202-233 (CHANNEL CATFISH VIRUS)(CCV) PVG42_HSV11 HYPOTHETICAL GENE 42 PROTEIN ICTALURID HERPESVIRUS 1  91-125 (CHANNEL CATFISH VIRUS)(CCV) PVG43_HSV11 HYPOTHETICAL GENE 43 PROTEIN ICTALURID HERPESVIRUS 1 109-140 157-185 (CHANNEL CATFISH VIRUS)(CCV) PVG46_HSV11 PROBABLE ICTALURID HERPESVIRUS 1 888-925 MAJOR GLYCOPROTEIN (CHANNEL CATFISH VIRUS)(CCV) PVG48_HSVSA HYPOTHETICAL GENE 48 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 329-357 PVG50_HSVSA PROBABLE TRANSCRIPTION HERPESVIRUS SAIMIRI (STRAIN 11) 113-141 ACTIVAOR EDRF1 PVG51_HSV11 HYPOTHETICAL GENE 51 ICTALURID HERPESVIRUS 1 29-64  84-120 MEMBRANE PROTEIN (CHANNEL CATFISH VIRUS)(CCV) PVG52_HSV11 HYPOTHETICAL GENE 52 PROTEIN ICTALURID HERPESVIRUS 1  96-134 (CHANNEL CATFISH VIRUS)(CCV) PVG55_HSV11 HYPOTHETICAL GENE 55 PROTEIN ICTALURID HERPESVIRUS 1 100-129 (CHANNEL CATFISH VIRUS)(CCV) PVG56_HSV11 HYPOTHETICAL GENE 56 PROTEIN ICTALURID HERPESVIRUS 1 364-396 631-667 1091-1126 (CHANNEL CATFISH VIRUS)(CCV) PVG58_HSV11 HYPOTHETICAL GENE 58 PROTEIN ICTALURID HERPESVIRUS 1 342-375 480-508 (CHANNEL CATFISH VIRUS)(CCV) PVG58_HSVSA GENE 58 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 25-60 195-233 PVG59_HSV11 HYPOTHETICAL GENE 59 ICTALURID HERPESVIRUS 1  82-118 PROTEIN (CHANNEL CATFISH VIRUS)(CCV) PVG61_HSV11 HYPOTHETICAL GENE 61 PROTEIN ICTALURID HERPESVIRUS 1  76-109 (CHANNEL CATFISH VIRUS)(CCV) PVG64_HSV11 HYPOTHETICAL GENE 64 PROTEIN ICTALURID HERPESVIRUS 1 55-89 363-401 420-452 (CHANNEL CATFISH VIRUS)(CCV) PVG65_HSV11 HYPOTHETICAL GENE 65 PROTEIN ICTALURID HERPESVIRUS 1 801-836 1146-1174 1290-1326 (CHANNEL CATFISH VIRUS)(CCV) PVG67_HSV11 HYPOTHETICAL GENE 67 PROTEIN ICTALURID HERPESVIRUS 1 1150-1185 (CHANNEL CATFISH VIRUS)(CCV) PVG6_SPV1R GENE 6 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 60-89 PVG71_HSVSA HYPOTHETICAL GENE 71 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 128-158 PVG72_HSV11 HYPOTHETICAL GENE 72 PROTEIN ICTALURID HERPESVIRUS 1 445-478 720-751 1158-1189 1252-1285 (CHANNEL CATFISH VIRUS)(CCV) PVG75_HSV11 HYPOTHETICAL GENE 75 PROTEIN ICTALURID HERPESVIRUS 1 263-291 387-422 (CHANNEL CATFISH VIRUS)(CCV) PVG76_HSV11 HYPOTHETICAL GENE 76 PROTEIN ICTALURID HERPESVIRUS 1 187-221 (CHANNEL CATFISH VIRUS)(CCV) PVG7_SPVIR GENE 7 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 18-46 PVGF1_IBVB F1 PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 1719-1747 1856-1891 2108-2146 3601-3633 (STRAIN BEAUDETTE)(IBV) PVGH3_HCMVA GLYCOPROTEIN H301 PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  80-115 157-185 PVGL2_CVBF E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN F15) 1259-1294 PVGL2_CVBL9 E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN L9) 651-681 PVGL2_CVBLY E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN LY-138) 1259-1294 PVGL2_CVMB E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS) 1259-1294 PVGL2_CVBQ E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN QUEBEC) 1259-1294 PVGL2_CVBV E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN VACCINE) 1259-1294 PVGL2_CVH22 E2 GLYCOPROTEIN PRECURSOR HUMAN CORONAVIRUS (STRAIN 229E) 1053-1088 PVGL2_CVM4 E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN 1267-1304 WILD TYPE 4)(MHV-4) PVGL2_CVMA5 E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN A59 1215-1252 PVGL2_CMVJC E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV 1267-1304 (STRAIN JHMV/VARIANT CL-2) PVGL2_CVMJH E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN JHM) 1126-1163 PVGL2_CVPFS E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE 632-665 736-764 1328-1363 GASTROENTERITIS CORONAVIRUS PVGL2_CVPMI E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE 632-665 736-764 1328-1363 GASTROENTERITIS CORONAVIRUS PVGL2_CVPPR E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE 630-663 734-762 1326-1361 GASTROENTERITIS CORONAVIRUS PVGL2_CVPPU E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE 630-663 734-762 1326-1361 GASTROENTERITIS CORONAVIRUS PVGL2_CVPR8 E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 512-540 1104-1139 PVGL2_CVPRM E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 408-441 512-540 1104-1139 (STRAIN RM4)(PRCV) PVGL2_CVPRT E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 630-663 734-762 1326-1361 CORONAVIRUS (STRAIN NEB7) PVGL2_FIPV E2 GLYCOPROTEIN PRECURSOR FELINE INFECTIOUS PERITONTIS VIRUS 635-668 739-767 1331-1366 (STRAIN 79-1146)(FIPV) PVGL2_IBVB E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 153-188 (STRAIN BEAUDETTE)(IBV) PVGLB_HCMVA GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 116-147 706-743 PVGLB_HCMVT GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 116-147 707-744 PVGLB_HSV6U GLYCOPROTEIN B HERPES SIMPLEX VIRUS  72-110 (TYPE 6/STRAIN UGANDA-1102) PVGLB_HSVB1 GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUS TYPE 1 254-288 PVGLB_HSVB2 GLYCOPROTEIN B-1 PRECURSOR BOVINE HERPESVIRUS 2 745-774 (STRAIN BMV)(BOVINE MAMMILLITIS VIRUS PVGLB_HSVBC GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUS 1 (STRAIN COOPER 253-287 PVGLB_ILTV6 GLYCOPROTEIN B PRECURSOR INFECTIOUS LARYNGOTRACHEITIS VIRUS 442-472 (STRAIN 632)(ILIV) PVGLB_ILTVS GLYCOPROTEIN B PRECURSOR INFECTIOUS LARYNGOTRACHEITIS VIRUS 452-482 (STRAIN SA-2)(ILTV) PVGLB_ILTVT GLYCOPROTEIN B PRECURSOR INFECTIOUS LARYNGOTRACHEITIS VIRUS 452-482 (STRAIN THORNE V882)(ILTV) PVGLB_MCMVS GLYCOPROTEIN B PRECURSOR MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 135-163 738-776 PVGLC_HSV11 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 467-500 PVGLC_HSVIK GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 467-500 PVGLC_HSV2 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2) 435-465 PVGLC_HSV23 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 333) 436-466 PVGLC_HSVBC GLYCOPROTEIN G111 PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN COOPER) 475-507 PVGLC_VZVD GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 351-388 513-548 PVGLC_VZVS GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN SCOTT)(VZV) 351-388 513-548 PVGLD_HSVEA GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB1)(EHV-1) 340-370 PVGLD_HSVEB GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 41-70 390-420 PVGLD_HSVEK GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 41-70 390-420 PVGLE_HSVE4 GLYCOPROTEIN E EQUINE HERPESVIRUS TYPE 4  95-125 PVGLE_HSVEB GLYCOPROTEIN E PRECURSOR EQUINE HERPESVIRUS TYPE 1  63-100 390-420 PVGLE_HSVEL GLYCOPROTEIN E PRECURSOR EQUINE HERPESVIRUS TYPE 1  63-100 392-422 PVGLE_PRVR1 GLYCOPROTEIN G1 PRECURSOR PSEUDORABIES VIRUS (STRAIN RICE)(PRV) 332-369 PVGLE_BRSVA FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 265-301 482-511 PRECURSOR (STRAIN A51908)(BRS) PVGLF_BRSVC FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 484-513 PRECURSOR (STRAIN COPENHAGEN)(BRS) PVGLF_BRSVR FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 484-513 PRECURSOR (STRAIN RB94)(BRS) PVGLF_CDVO FUSION GLYCOPROTEIN CANINE DISTEMPER VIRUS 562-596 PRECURSOR (STRAIN ONDERSTEPOORT)(CDV) PVGLF_HRSV1 FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 484-513 PRECURSOR (SUBGROUP B/STRAIN 18537) PVGLF_HRSVA FUSION GLYCOPROTEIN HUMAN RESPIRATORY 484-513 PRECURSOR SYNCYTIAL VIRUS (STRAIN A2) PVGLF_HRSVL FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 484-513 PRECURSOR (SUBGROUP A/STRAIN LONG) PVGLF_HRSVR FUSION GLYCOPROTEIN HUMAN RESPIRATORY 484-513 PRECURSOR SYNCYTIAL VIRUS (STRAIN RSS-2) PVGLF_MEASE FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN EDMONSTON) 224-256 451-484 PRECURSOR PVGLF_MEAS1 FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN IP-J-CA 227-259 454-487 PRECURSOR PVGLF_MEASY FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN YAMAGATA-1) 224-256 451-484 PRECURSOR PVGLF_MUMP1 FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN SBL-1)  5-38 446-474 PRECURSOR PVGLF_MUMPM FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 446-474 PRECURSOR PVGLF_MUMPR FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN RW) 446-474 PRECURSOR PVGLF_MUMPS FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN SBL)  5-38 446-474 PRECURSOR PVGLF_NDV1 FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 132-165 PRECURSOR (STRAIN ITALIEN/45)(NDV) PVGLF_NDVL FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN LA5/46)(NDV) 132-165 PRECURSOR PVGLF_PHODV FUSION GLYCOPROTEIN PHOCINE DISTEMPER VIRUS 531-565 PRECURSOR PVGLF_PHHC FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 456-484 PRECURSOR PVGLF_P13B FUSION GLYCOPROTEIN BOVINE PARAINFLUENZA 3 VIRUS 453-481 PRECURSOR PVGLF_P13H4 FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 453-481 PRECURSOR 3 VIRUS (STRAIN NIH 47885 PVGLF_RINDK FUSION GLYCOPROTEIN RINDERPEST VIRUS (STRAIN KABETTE O)(RDV) 220-252 447-480 PRECURSOR PVGLF_RINDL FUSION GLYCOPROTEIN RINDERPEST VIRUS (STRAIN L)(RDV) 220-252 447-480 PRECURSOR PVGLF_SEND5 FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 460-488 PRECURSOR PVGLF_SENDF FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN FUSHIMI) 460-488 PRECURSOR PVGLF_SENDH FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN HARRIS) 460-488 PRECURSOR PVGLF_SENDJ FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN HVJ) 460-480 PRECURSOR PVGLF_SENDZ FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z) 460-488 PRECURSOR PVGLF_SV5 FUSION GLYCOPROTEIN SIMIAN VIRUS 5 (STRAIN W3)(SV5) 446-474 PRECURSOR PVGLF_TRTV FUSION GLYCOPROTEIN TURKEY RHINOTRACHEITIS VIRUS (TRTV) 452-481 PRECURSOR PVGLG_HSVEB GLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 327-364 PVGLG_SYNV SPIKE GLYCOPROTEIN SONCHUS YELLOW NET VIRUS (SYNV) 524-553 PRECURSOR PVGLG_VSVIG SPIKE GLYCOPROTEIN VESICULAR STOMATITIS VIRUS 450-488 PRECURSOR (SEROTYPE INDIANA/STRAIN GLASGOW) PVGLG_VSVJO SPIKE GLYCOPROTEIN VESICULAR STOMATITIS VIRUS (SEROTYPE 457-492 PRECURSOR NEW JERSEY/STRAIN OGDEN) PVGLG_VSVO SPIKE GLYCOPROTEIN VESICULAR STOMATITIS VIRUS (STRAIN ORSAY) 450-488 PRECURSOR PVGLG_VSVSJ SPIKE GLYCOPROTEIN VESICULAR STOMATITIS VIRUS (STRAIN SAN JUAN) 450-488 PRECURSOR PVGLH_HCMVA GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 691-719 PVGLH_HCMVT GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 690-718 PVGLH_HSV6G GLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 215-247 640-677 PVGLH_HSVE4 GLYCOPROTEIN H PRECURSOR EQUINE HERPESVIRUS TYPE 4 814-850 PVGLH_HSVEB GLYCOPROTEIN H PRECURSOR EQUINE HERPESVIRUS TYPE 1 807-843 PVGLI_HCMVA IMMEDIATE EARLY HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 158-194 GLYCOPROTEIN PRECURSOR PVGLM_BUNGE M POLYPROTEIN PRECURSOR BUNYAVIRUS GERMISTON 197-227 438-468  982-1020 1049-1084 PVGLM_BUNL7 M POLYPROTEIN PRECURSOR BUNYAVIRUS LA CROSSE (ISOLATE L74) 190-220 PVGLM_BUNSH M POLYPROTEIN PRECURSOR BUNYAVIRUS SNOWSHOE HARE 190-220 344-381 PVGLM_BUNYW M POLYPROTEIN PRECURSOR BUNYAMWERA VIRUS 193-228 434-472 823-854 PVGLM_DUGBV M POLYPROTEIN PRECURSOR DUGBE VIRUS 244-273 637-672 886-915 935-965 1403-1441 PVGLM_HANTB M POLYPROTEIN PRECURSOR HANTANN VIRUS (STRAIN B-1)(KOREAN 610-641 1081-1119 HEMORRHAGIC FEVER VIRUS) PVGLM_HANTH M POLYPROTEIN PRECURSOR HANTANN VIRUS (STRAIN HOJO) 188-222 612-643 1082-1120 PVGLM_HANTL M POLYPROTEIN PRECURSOR HANTANN VIRUS (STRAIN LEE) 188-222 612-643 1083-1121 PVGLM_HANTV M POLYPROTEIN PRECURSOR HANTANN VIRUS (STRAIN 76-118) 188-222 612-643 1083-1121 PVGLM_INSV M POLYPROTEIN PRECURSOR IMPATIENS NECROTIC SPOT VIRUS (INSV) 269-307 1028-1062 PVGLM_PHV M POLYPROTEIN PRECURSOR PROSPECT HILL VIRUS (PHV) 616-649 1088-1121 PVGLM_PTPV M POLYPROTEIN PRECURSOR PUNTA TOTO PHLEBOVIRUS 949-982 1275-1309 PVGLM_PUUMH M POLYPROTEIN PRECURSOR PUUMALA VIRUS (STRAIN HALLNAS B1) 620-653 1092-1125 PVGLM_PUUMS M POLYPROTEIN PRECURSOR PUUMALA VIRUS (STRAIN SOTKAMO) 620-653 1092-1125 PVGLM_RVFV M POLYPROTEIN PRECURSOR RIFT VALLEY FEVER VIRUS (RVFV) 620-650 830-863 PVGLM_RVFVZ M POLYPROTEIN PRECURSOR RIFT VALLEY FEVER 620-650 830-863 1156-1185 VIRUS (STRAIN ZH-648 M12)(RVFV) PVGLM_SEOU8 M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN 80-39) 610-641 1081-1119 PVGLM_SEOUR M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN R22) 605-641 1082-1120 PVGLM_SEOUS M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN SR-11)(SAPPORO RAT VIRUS) 610-641 1081-1119 PVGLM_UUK M POLYPROTEIN PRECURSOR UUKUNIEMI VIRUS (UUK) 431-468 966-995 PVGLP_BEY REPLOMER GLYCOPORTEIN BERNE VIRUS (BEV) 1491-1526 PRECURSOR PVGLY_JUNN GLYCOPROTEIN POLYPROTEIN JUNIN ARENAVIRUS 12-45 PRECURSOR PVGLY_LASSG GLYCOPROTEIN POLYPROTEIN LASSA VIRUS (STRAIN GA391) 237-265 PRECURSOR PVGLY_LASSJ GLYCOPROTEIN POLYPROTEIN LASSA VIRUS (STRAIN JOSIAH) 238-266 PRECURSOR PVGLY_PIARV GLYCOPROTEIN POLYPROTEIN PICHINDE ARENAVIRUS 12-50 PRECURSOR PVGLY_TACV GLYCOPROTEIN POLYPROTEIN TACARBIDE VIRUS 12-50 PRECURSOR PVGLY_TACV5 GLYCOPROTEIN POLYPROTEIN TACARBIDE VIRUS (STRAIN V5 12-50  89-124 PRECURSOR PVGLY_TACV7 GLYCOPROTEIN POLYPROTEIN TACARBIDE VIRUS (STRAIN V7) 12-50  89-124 PRECURSOR PVGLY_TACVT GLYCOPROTEIN POLYPROTEIN TACARBIDE VIRUS (STRAIN TRVL 11598) 12-50  89-124 PRECURSOR PVGNB_CPMV GENOME POLYPROTEIN B COWPEA MOSAIC VIRUS (CPMV) 1527-1555 PVGNM_CPMV GENOME POLYPROTEIN M COWPEA MOSAIC VIRUS (CPMV) 209-242 741-771 PVGNM_CPSMV GENOME POLYPROTEIN M COWPEA SEVERE MOSAIC VIRUS (STRAIN DG) 50-86 479-515 PVGNM_RCMV GENOME POLYPROTEIN M RED CLOVER MOTTLE VIRUS (RCMV) 766-799 PVGP2_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS  78-111 ANTIGEN GP220 (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PVGP3_EBV ENVELOPE GLYCOPROTEIN GP340 EPSTEIN-BARR VIRUS  78-111 (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PVH02_VACCC LATE PROTEIN H2 VACCINIA VIRUS (STRAIN COPENHAGEN) 54-89 PVH02_VACCV LATE PROTEIN H2 VACCINIA VIRUS (STRAIN WR) 54-89 PVH02_VARV LATE PROTEIN H2 VARJOLA VIRUS PVH05_VACCC PROTEIN H5 VACCINIA VIRUS (STRAIN COPENHAGEN) 115-149 PVH05_VACCV PROTEIN H5 VACCINIA VIRUS (STRAIN WR) 115-149 PVH05_VARV PROTEIN H5 VARJOLA VIRUS 133-167 PVHEL_LSV PROBABLE HELICASE LILY SYMPTOMLESS VIRUS (LSV) 107-143 PV101_VACCC PROTEIN 11 VACCINIA VIRUS (STRAIN COPENHAGEN) 54-82 PV101_VARV PROTEIN 11 VARJOLA VIRUS 54-82 PV106_VACCV PROTEIN 16 VACCINIA VIRUS (STRAIN WR) 55-88 PV106_VARV PROTEIN 16 VARJOLA VIRUS 55-88 PV108_VACCC PUTATIVE RNA HELICASE 18 VACCINIA VIRUS (STRAIN COPENHAGEN) 591-624 PV108_VACCV PUTATIVE RNA HELICASE 18 VACCINIA VIRUS (STRAIN WR) 591-624 PV108_VARV PUTATIVE RNA HELICASE 18 VARJOLA VIRUS 591-624 PV1E1_HCMVA 55 KD HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 243-271 IMMEDIATE-EARLY PROTEIN 1 PV1E1_HCMVT 55 KD HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 243-271 IMMEDIATE-EARLY PROTEIN 1 PVIF_BIV06 VIRION INFECTIVITY FACTOR BOVINE IMMUNODEFICIENCY 42-78 VIRUS (ISOLATE 106)(BIV) PVIF_BIV27 VIRION INFECTIVITY FACTOR BOVINE IMMUNODEFICIENCY 42-78 VIRUS (ISOLATE 127)(BIV) PVIF_SIVGB VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS (ISOLATE GB1) 46-78 PVIF_SIVMK VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY  82-111 VIRUS (K6W ISOLATE)(SIV-MAC) PVIMP_EBV PROBABLE INTEGRAL EPSTEIN-BARR VIRUS 125-159 MEMBRANE PROTEIN BBRF3 (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PVIMP_HCMVA PROBABLE INTEGRAL HUMAN CYTOMEGALOVIRUS (STRAIN AD169  68-100 MEMBRANE PROTEIN PVIMP_HSV11 PROBABLE INTEGRAL HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)  83-114 136-171 250-282 MEMBRANE PROTEIN PVIMP_HSVEB PROBABLE INTEGRAL EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 24-56  93-127 145-180 332-361 MEMBRANE PROTEIN PVIMP_HSVSA INTEGRAL MEMBRANE PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  76-111 PVINT_SSV1 PROBABLE INTEGRASE SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 253-291 PVJ05_VACCC PROTEIN J5 VACCINIA VIRUS (STRAIN COPENHAGEN) 54-85 PVJ05_VACCV PROTEIN J5 VACCINIA VIRUS (STRAIN WR) 54-85 PVJ05_VARV PROTEIN J5 VARJOLA VIRUS 54-85 PVK04_VACCC PROTEIN K4 VACCINIA VIRUS (STRAIN COPENHAGEN)  87-120 PVK04_VACCV PROTEIN K4 VACCINIA VIRUS (STRAIN WR)  87-120 PVK05_VACCC PROTEIN K5 VACCINIA VIRUS (STRAIN COPENHAGEN)  74-103 PVK05_VACCV PROTEIN K5 VACCINIA VIRUS (STRAIN WR)  87-116 PVL02_VACCC PROTEIN L2 VACCINIA VIRUS (STRAIN COPENHAGEN) 39-76 PVL02_VACCV PROTEIN L2 VACCINIA VIRUS (STRAIN WR) 39-76 PVL02_VARV PROTEIN L2 VARJOLA VIRUS 39-76 PLV03_VACCC PROTEIN L3 VACCINIA VIRUS (STRAIN COPENHAGEN) 292-322 PVL03_VACCV PROTEIN L3 VACCINIA VIRUS (STRAIN WR) 292-322 PVL03_VARV PROTEIN L3 VARJOLA VIRUS 291-321 PVL05_VACCV PROTEIN L5 VACCINIA VIRUS (STRAIN WR), AND VACCINIA 16-45 VIRUS (STRAIN COPENHAGE PVL05_VARV PROTEIN L5 VARJOLA VIRUS 16-45 PVL1_HPV5B PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 373-406 PVL2_CRPVK PROBABLE L2 PROTEIN COTTONTAIL RABBIT (SHOPE) PAPILLOMAVIRUS 26-57 (STRAIN KANSAS)(CRPV) PVL2_HPV05 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5 27-57 PVL2_HPV08 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 27-57 PVL2_HPV1A PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 26-56 PVL2_HPV39 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 29-59 285-313 PVL2_HPV42 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 42 344-379 PVL2_HPV47 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 26-57 PVL2_HPV51 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 29-59 PVL2_HPV5B PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 27-57 PVL2_HPVME PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE ME180 29-59 PVL2_PCPV1 PROBABLE L2 PROTEIN PYGMY CHIMPANZEE 29-59 PAPILLOMAVIRUS TYPE 1 PVL96_IRV1 L96 PROTEIN TIPULA IRIDESCENT VIRUS (TIV) 144-177 686-718 (INSECT IRRIDESCENT VIRUS TYPE 1) PVM1_REOVD MINOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING 280-318 324-361 PROTEIN MU-2 PVM1_REOVL MINOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 280-318 PROTEIN MU-2 PVM21_REOVD MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING) 168-199 PROTEIN MU-1/MU-1C PVM22_REOVD MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING) 168-199 PROTEIN MU-1/MU-1C PVM2_REOVJ MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 2/STRAIN D5/JONES) 168-199 PROTEIN MU-1/MU-1C PVM2_REOVL MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 168-199 PROTEIN MU-1/MU-1C PVM3_REOVD MAJOR NONSTRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING) 333-364 PROTEIN MU-NS PVMAT_SV5 MATRIX PROTEIN SIMIAN VIRUS 5 (STRAIN W3)(SV5) 308-342 PVMAT_TRTV MATRIX PROTEIN TURKEY RHINOTRACHEITIS VIRUS (TRTV) 122-150 PVME1_CVBM E1 GLYCOPROTEIN BOVINE CORONAVIRUS (STRAIN MEBUS)  64-102 PVME1_CVHOC E1 GLYCOPROTEIN HUMAN CORONAVIRUS (STRAIN OC43)  64-102 PVME1_CVMA5 E1 GLYCOPROTEIN MURINE CORONAVIRUS MHV (STRAIN A59)  65-103 PVME1_CVMJH E1 GLYCOPROTEIN MURINE CORONAVIRUS MHV (STRAIN JHM)  65-103 PVME1_CVTKE E1 GLYCOPROTEIN TURKEY ENTERIC CORONAVIRUS (TCV)  64-102 PVME1_1BVB E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS  73-101 (STRAIN BEAUDETTE)(IBV) PVME1_1BVB2 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS  73-101 (STRAIN BEAUDETTE M42)(IBV) PVMEM_EBV PROBABLE MEMBRANE PROTEIN EPSTEIN-BARR VIRUS (STRAIN 178-213 B95-8)(HUMAN HERPESVIRUS 4) PVMP_CERV MOVEMENT PROTEIN CARNATION ETCHED RING VIRUS (CERV)  93-126 PVMP_SOCMV MOVEMENT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 66-98 273-303 PVMSA_HPBDB MAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS (BROWN SHANGHAI 201-238 269-302 PRECURSOR DUCK ISOLATE S5)(DHBV) PVMSA_HPBDC MAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS (STRAIN CHINA)(DHBV) 194-227 268-301 PRECURSOR PVMSA_HPBDU MAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS (DHBV) 157-190 231-264 PRECURSOR PVMSA_HPBDW MAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS (WHITE SHANGHAI 194-228 269-302 PRECURSOR DUCK ISOLATE S31)(DHBV) PVMSA_HPBGS MAJOR SURFACE ANTIGEN GROUND SQUIRREL HEPATITIS VIRUS (GSHV) 209-243 271-307 PRECURSOR PVMSA_HPBHE MAJOR SURFACE ANTIGEN HERON HEPATITIS B VIRUS 159-195 236-269 PRECURSOR PVMSA_HPBV0 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 70-98 PVMSA_HPBV2 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADW2) 244-272 PRECURSOR PVMSA_HPBV4 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADR4) 244-272 PRECURSOR PVMSA_HPBV9 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADW/STRAIN 991) 244-272 PRECURSOR PVMSA_HPBVA MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (STRAIN ALPHA1) 233-261 PRECURSOR PVMSA_HPBVD MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE AD) 70-98 PVMSA_HPBV1 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADW/ 233-261 PRECURSOR STRAIN INDONESIA/PIDW420) PVMSA_HPBVJ MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE 233-261 PRECURSOR ADW/STRAIN JAPAN/PJDW233) PVMSA_HPBVL MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (STRAIN 233-261 PRECURSOR LSH/CHIMPANZEE ISOLATE) PVMSA_HPBVN MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADR/STRAIN NC-1) 70-98 PVMSA_HPBVO MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADW/ 233-261 PRECURSOR STRAIN OKINAWA/PODW282) PVMSA_HPBVP MAJOR SURFACE HEPATITIS B VIRUS (SUBTYPE ADW/ 244-272 ANTIGEN PRECURSOR STRAIN PHILIPPINO/PFDW294) PVMSA_HPBVR MAJOR SURFACE HEPATITIS B VIRUS (SUBTYPE ADR) 244-272 ANTIGEN PRECURSOR PVMSA_HPBVS MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE AR) 70-98 PVMSA_HPBVW MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADW) 233-261 PRECURSOR PVMSA_HPBVY MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE AYW) 233-261 PRECURSOR PVMSA_HPBVZ MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADYW) 233-261 PRECURSOR PVMSA_WHV1 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 1 207-241 269-305 PRECURSOR PVMSA_WHV59 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 59 212-246 274-310 PRECURSOR PVMSA_WHV7 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 7 212-246 274-310 PRECURSOR PVMSA_WHV8 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 8 212-246 274-310 PRECURSOR PVMSA_WHV81 PROBABLE MAJOR SURFACE WOODCHUCK HEPATITIS VIRUS 212-246 274-305 ANTIGEN PRECURSOR 8 (INFECTIOUS CLONE) PVMSA_WHVW6 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 125-161 PRECURSOR W64 (ISOLATE PWS23) PVMT2_IAZH MATRIX (M2) PROTEIN INFLUENZA A VIRUS (STRAIN A/SWINE/IOWA/15/30) 10-42 PVMT8_MYXVL M-T8 PROTEIN MYXOMA VIRUS (STRAIN LAUSANNE)  5-34 141-170 PVMT9_MYXVL MT-9 PROTEIN MYXOMA VIRUS (STRAIN LAUSANNE) 246-282 PVN02_VACCC PROTEIN N2 VACCINIA VIRUS (STRAIN COPENHAGEN) 31-68 PVN02_VACCV PROTEIN N2 VACCINIA VIRUS (STRAIN WR) 31-68 PVN02_VARV PROTEIN N2 VARJOLA VIRUS 31-68 PVN34_ROTPC NONSTRUCTURAL PROTEIN NS34 PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 336-366 PVNCA_AAV2 DNA REPLICATION PROTEIN ADENO-ASSOCIATED VIRUS 2 (AAV2) 163-196 365-401 PVNCS_PAVBO PROBABLE NONCAPSID BOVINE PARVOVIRUS (BPV) 180-217 346-377 439-471 PROTEIN NS1 PVNS1_AHSV4 NONSTRUCTURAL PROTEIN NS1 AFRICAN HORSE SICKNESS VIRUS 351-380 (SEROTYPE 4/STRAIN VACCINE) PVNS1_IAALA NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 114-144 A/ALASKA/6/77) PVNS1_IAANN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 114-144 A/ANN ARBOR/6/60) PVNS1_IACHI NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 114-144 A/CHILE/1/8) PVNS1_IACKG NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 107-144 A/CHICKEN/GERMANY/N/49) PVNS1_IACKJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 104-141 A/CHICKEN/JAPAN/24) PVNS1_IADA2 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 107-144 A/DUCK/ALBERTA/60/76) PVNS1_IADE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 104-141 A/DUCK/ENGLAND/1/56) PVNS1_IADU3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 104-141 A/DUCK/UKRAINE/1/63) PVNS1_IAFOM NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 114-144 A/FORT MONMOUTH/1/47) PVNS1_IAFOW NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 114-144 A/FORT WARREN/1/50) PVNS1_IAFPR NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 107-144 A/FOWL PLAGUE VIRUS/ROSTOCK/34) PVNS1_IALE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 114-144 A/LENINGRAD/134/57) PVNS1_IALEN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 114-144 A/LENINGRAD/54/1) PVNS1_IAMA6 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 107-144 A/MALLARD/ALBERTA/88/76) PVNS1_IAMAN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 107-144 A/MALLARD/NEW YORK/6750/78) PVNS1_IAMAO NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 107-144 A/MALLARD/NEW YORK/6874/78) PVNS1_IAMYN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 104-141 A/MYNAH/HANEDA-THAI/76) PVNS1_IAP10 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 107-144 A/PINTAIL/ALBERTA/119/79) PVNS1_IAP11 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 107-144 A/PINTAIL/ALBERTA/121/79) PVNS1_IAP12 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 107-144 A/PINTAIL/ALBERTA/268/78) PVNS1_IAP13 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144 PINTAIL/ALBERTA/358/79) PVNS1_IAPUE NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/PUERTO RICO/8/34) 114-144 PVNS1_IATKB NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/TURKEY/ 107-144 BETHLEHEM-GLILIT/1492-B/82) PVNS1_IATKC NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144 TURKEY/CANADA/63) PVNS1_IATRS NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 104-141 TERN/SOUTH AFRICA/61) PVNS1_IATRT NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144 TERN/TURKMENIA/18/72) PVNS1_IAUDO NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/UDORN/307/72) 114-144 PVNS1_IAUSS NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/USSR/90/77) 114-144 PVNS1_IAZ11 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/SWINE/IOWA/15/30 107-144 PVNS1_INBPA NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS (STRAIN B/PA/79) 266-295 PVNS1_INCAA NONSTRUCTURAL PROTEIN NS1 INFLUENZA C VIRUS (STRAIN C/ANN ARBOR/1/50) 222-255 PVNS1_INCCA NONSTRUCTURAL PROTEIN NS1 INFLUENZA C VIRUS (STRAIN C/CALIFORNIA/78) 222-255 PVNS2_HRSV1 NONSTRUCTURAL PROTEIN 2 HUMAN RESPIRATORY SYNCYTIAL VIRUS 20-49 (SUBGROUP B/STRAIN 18537) PVNS2_HRSVA NONSTRUCTURAL PROTEIN 2 HUMAN RESPIRATORY SYNCYTIAL 20-49 VIRUS (STRAIN A2) PVNS2_INBLE NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS (STRAIN B/LEE/40 48-77 PVNS2_INBYA NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS (STRAIN B/YAMAGATA/1/73) 48-77 PVNS4_CVMS NONSTRUCTURAL PROTEIN 4 MURINE CORONAVIRUS MHV (STRAIN S) 17-45 PVNS4_CVPFS NONSTRUCTURAL PROTEIN 4 PORCINE TRANSMISSIBLE GASTROENTERITIS  4-34 CORONAVIRUS (STRAIN FS77 PVNS4_CVPPU NONSTRUCTURAL PROTEIN 4 PORCINE TRANSMISSIBLE GASTROENTERITIS  4-39 CORONAVIRUS (STRAIN PUR PVNS4_CVPRM NONSTRUCTURAL PROTEIN 4 PORCINE REPIRATORY CORONAVIRUS  4-39 PVNST_CVMA5 30 KD NONSTRUCTURAL PROTEIN MURINE CORONAVIRUS MHV (STRAIN A59) 45-80 PVNST_CVMJH 30 KD NONSTRUCTURAL PROTEIN MURINE CORONAVIRUS MHV (STRAIN JHM) 49-84 PVNST_INCGL NONSTRUCTURAL INFLUENZA C VIRUS (STRAIN 222-255 PROTEINS NS1-NS2 C/GREAT LAKES/1167/54) PVNST_INCH NONSTRUCTURAL INFLUENZA C VIRUS (STRAIN 222-255 PROTEINS NS1-NS2 C/JOHANNESBURG/1/66) PNVST_INCM1 NONSTRUCTURAL INFLUENZA C VIRUS (STRAIN C/MISSISSIPPI/80) 222-255 PROTEINS NS1-NS2 PVNST_INCYA NONSTRUCTURAL INFLUENZA C VIRUS (STRAIN C/YAMAGATA/10/81) 222-255 PROTEINS NS1-NS2 PVNUA_PRVKA PROBABLE NUCLEAR ANTIGEN PSEUDORABIES VIRUS (STRAIN KAPLAN)(PRV) 756-784 PVNUC_DHVH NUCLEOPROTEIN DHORI VIRUS (STRAIN INDIAN/1313/61)(DHO) 297-331 441-470 PVNUC_IACKP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 354-388 A/CHICKEN/PENNSYLVANIA/1/83) PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 354-388 A/EQUINE/LONDON/1416/73) PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 354-388 A/EQUINE/PRAGUE/1/56) PVNUC_IAHTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 354-388 A/EQUINE/TENNESSEE/5/86) PVNUC_MABVM NUCLEOPROTEIN MARBURG VIRUS (STRAIN MUSOKE) 16-46 PVNUC_MABVP NUCLEOPROTEIN MARBURG VIRUS (STRAIN POPP) 16-46 PVO01_VACCC PROTEIN O1 VACCINIA VIRUS (STRAIN COPENHAGEN) 511-539 550-581 PVO01_VARV PROTEIN O1 VARJOLA VIRUS 511-539 PVOR1_NMV 186 KD PROTEIN NARCISSUS MOSAIC VIRUS (NMV) 121-150 641-671 PVOR1_PVMR 223 KD PROTEIN POTATO VIRUS M (STRAIN RUSSIAN)(PVM) 1667-1703 PVOR1_SMYEA 150 KD PROTEIN STRAWBERRY MILD YELLOW EDGE- 121-153 ASSOCIATED VIRUS (SMYEAV) PVP03_HSVSA PROBABLE MEMBRANE HERPESVIRUS SAIMIRI (STRAIN 11) 462-493 ANTIGEN 3 PVP10_NPVAC P10 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR  4-38 POLYHEDROSIS VIRUS (ACMNPV) PVP10_NPVOP P10 PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID  4-38 POLYHEDROSIS VIRUS (OPMNPV) PVP10_RBSDV PROTEIN S10 RICE BLACK STREAKED DWARF VIRUS (RBSDV) 260-291 PVP19_HSVEB CAPSID ASSEMBLY AND EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 239-268 287-325 DNA MATURATION PROTEIN PVP23_HCMVA PROBABLE CAPSID PROTEIN VP23 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 141-172 PVP23_HSV6U PROBABLE CAPSID PROTEIN VP23 HERPES SIMPLEX VIRUS (TYPE 46-79 206-238 6/STRAIN UGANDA-1102) PVP23_HSVEB PROBABLE CAPSID PROTEIN VP23 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)(EHV-1) 18-48 PVP23_VZVD PROBABLE CAPSID PROTEIN VP23 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV) 224-253 PVP2_AHSV4 OUTER CAPSID PROTEIN VP2 AFRICAN HORSE SICKNESS VIRUS 408-441 (SEROTYPE 4/STRAIN VACCINE) PVP2_BTV10 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 649-683 PVP2_BTV11 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 11/ISOLATE USA) 558-586 649-683 PVP2_BTV17 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 17/ISOLATE USA) 391-424 564-593 PVP2_BTV1A OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 1/ 654-688 ISOLATE AUSTRALIA) PVP2_BTV1S OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 1/ 654-688 ISOLATE SOUTH AFRICA) PVP2_EHDV1 OUTER CAPSID PROTEIN VP2 EPIZOOTIC HEMORRHAGIC DISEASE 878-915 VIRUS (SEROTYPE 1)(EHDV-1) PVP2_ROTBR RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN RF) 334-367 522-557 PVP2_ROTBU RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN UK) 334-367 523-558 PVP2_ROTHW RNA-BINDING PROTEIN VP2 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 342-377 532-567 PVP2_ROTPC RNA-BINDING PROTEIN VP2 PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 514-549 589-617 811-841 PVP2_ROTS1 RNA-BINDING PROTEIN VP2 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 335-368 523-558 PVP35_VACCC IMMUNODOMINANT ENVELOPE VACCINIA VIRUS (STRAIN COPENHAGEN) 278-311 PROTEIN P35 PVP35_VACCV IMMUNODOMINANT ENVELOPE VACCINIA VIRUS (STRAIN WR) 278-311 PROTEIN P35 PVP35_VARV IMMUNODOMINANT ENVELOPE VARJOLA VIRUS 279-312 PROTEIN P35 PVP39_NPVOP MAJOR CAPSID PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 107-141 POLYHEDROSIS VIRUS (OPMNPV) PVP3_EHDV1 VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 383-412 734-770 (SEROTYPE 1)(EHDV-1) PVP3_EHDVA VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 383-412 734-770 PVP3_RDV MAJOR 114 KD STRUCTURAL RICE DWARF VIRUS (RDV) 297-330 PROTEIN PVP3_ROTS1 INNER CORE PROTEIN VP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 652-688 PVP40_EBV CAPSID PROTEIN P40 EPSTEIN-BARR 429-457 VIRUS (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PVP40_HSVSA CAPSID PROTEIN P40 HERPESVIRUS SAIMIRI (STRAIN 11 119-152 PVP40_ILTVT CAPSID PROTEIN P40 INFECTIOUS LARYNGOTRACHEITIS VIRUS  84-119 (STRAIN THORNE V882)(ILTV) PVP40_VZVD CAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)(VZV 485-516 PVP47_NPVAC VIRAL TRANSCRIPTION AUTOGRAPHA CALIFORNICA NUCLEAR 239-270 REGULATOR P47 POLYHEDROSIS VIRUS (ACMNPV) PVP4A_VACCC MAJOR CORE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 553-591 P4A PRECURSOR PVP4A_VACCV MAJOR CORE PROTEIN VACCINIA VIRUS (STRAIN WR) 553-591 P4A PRECURSOR PVP4A_VARV MAJOR CORE PROTEIN VARJOLA VIRUS 554-592 P4A PRECURSOR PVP4_ROTG1 OUTER CAPSID PROTEIN VP4 ROTAVIRUS (GROUP B/STRAIN IDIR)  93-122 468-499 PVP4_WTV NONSTRUCTURAL PROTEIN PNS4 WOUND TUMOR VIRUS (WTV) 278-308 624-659 PVP5_BRD OUTER CAPSID PROTEIN VP5 BROADHAVEN VIRUS (BRD)  96-133 295-326 PVP5_BTVIA OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 295-324 1/ISOLATE AUSTRALIA) PVP5_BTV1 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 1/ 295-324 ISOLATE SOUTH AFRICA) PVP5_BTV2A OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 2/ISOLATE USA) 295-324 PVP5_EHDV1 OUTER CAPSID PROTEIN VP5 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 290-325 (SEROTYPE 1)(EHVD-1) PVP5_WTV OUTER COAT PROTEIN P5 WOUND TUMOR VIRUS (WTV) 691-719 PVP61_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 159-187 PVP62_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 155-183 210-245 PVP62_MRDV PROBABLE NONSTRUCTURAL 36.3 MAIZE ROUGH DWARF VIRUS (MRDV) 25-61 222-257 KD PROTEIN PVP64_NPVOP MAJOR ENVELOPE ORGYIA PSEUDOTSUGATA MULTICAPSID 285-313 GLYCOPROTEIN PRECURSOR POLYHEDROSIS VIRUS (OPMNPV) PVP67_NPVAC MAJOR ENVELOPE AUTOGRAPHA CALIFORNICA NUCLEAR 281-316 GLYCOPROTEIN PRECURSOR POLYHEDROSIS VIRUS (ACMNPV) PVP67_NPVGM MAJOR ENVELOPE GALLERIA MELLONELLA NUCLEAR 198-233 GLYCOPROTEIN POLYHEDROSIS VIRUS (GMNPV) PVP6_BTV11 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 11/ISOLATE USA) 155-183 PVP6_BTV17 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 17/ISOLATE USA) 155-183 PVP6_BTV15 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 17/ 159-187 ISOLATE SOUTH AFRICA) PVP6_BTV2A VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 2/ISOLATE USA) 131-159 PVP6_WTV STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS (WTV) 180-209 PVP6_WTVNJ STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS (STRAIN NJ)(WTV) 180-209 PVP79_NPVAC 79 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 405-442 POLYHEDROSIS VIRUS (ACMNPV) PVP7_WTV NONSTRUCTURAL PROTEIN PNS7 WOUND TUMOR VIRUS (WTV) 454-490 PVP87_NPVOP CAPSID PROTEIN P87 ORGYIA PSEUDOTSUGATA MULTICAPSID  77-112 POLYHDEDROSIS VIRUS (OPMNPV) PVP8_BTV10 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 104-139 PVP8_BTV11 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 11/ISOLATE USA) 104-139 PVP8_BTV13 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 13/ISOLATE USA) 104-139 PVP8_BTV17 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 17/ISOLATE USA) 104-139 PVP8_BTV1A NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 1/ 104-139 ISOLATE AUSTRALIA) PVP8_BTV1S NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 1/ 104-139 ISOLATE SOUTH AFRICA) PVP8_BTV2A NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 2/ISOLATE USA) 104-139 PVP8_RDV OUTER CAPSID PROTEIN P8 RICE DWARF VIRUS (RDV) 374-412 PVP8_WTV OUTER CAPSID PROTEIN P8 WOUND TUMOR VIRUS (WTV) 164-195 379-412 PVPHE_NPVAC 29 KD POLYHEDRAL AUTOGRAPHA CALIFORNICA NUCLEAR 145-173 ENVELOPE PROTEIN POLYHEDROSIS VIRUS (ACMNPV) PVPHE_NPVOP 32 KD POLYHEDRAL ORGYIA PSEUDOTSUGATA MULTICAPSID 122-151 ENVELOPE PROTEIN POLYHEDROSIS VIRUS (OPMNPV) PVPR_HV1A2 VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 37-74 (ARV2/SF2 ISOLATE)(HIV-1) PVPR_HV2BE VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 41-73 (ISOLATE BEN)(HIV-2) PVPR_HV2CA VPR PROTEIN HUMNA IMMUNODEFICIENCY VIRUS TYPE 2 41-73 (ISOLATE CAM2)(HIV-2) PVPR_HV2D1 VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 41-73 (ISOLATE D194)(HIV-2) PVPR_HV2D2 VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 41-73 (ISOLATE D205,7)(HIV-2) PVPR_HV2NZ VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 41-73 (ISOLATE NIH-Z)(HIV-2) PVPR_HV2RO VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 41-73 (ISOLATE ROD)(HIV-2) PVPR_HV2SB VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 41-73 (ISOLATE SBLISY)(HIV-2) PVPR_HV2ST VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 40-72 TYPE 2 (ISOLATE ST)(HIV-2) PVPR_SIVCZ VPR PROTEIN CHIMPANZEE IMMUNODEFICIENCY 37-74 VIRUS (SIV(CPZ))(CIV) PVPR_SIVM1 VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 37-69 (MM142-83 ISOLATE)(SIV-MAC) PVPR_SIVMK VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 37-69 (K6W ISOLATE)(SIV-MAC) PVPR_SIVML VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 37-69 (K78 ISOLATE)(SIV-MAC) PVPR_SIVS4 VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS (F236/SMH4 37-69 ISOLATE)(SOOTY MANGA PVPR_SIVSP VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS (PBJ/BC13 37-69 ISOLATE)(SOOTY MANGABE PVPU_HV1B1 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  3-33 (BH10 ISOLATE, HXB3 ISOLATE) PVPU_HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-33 (BH8 ISOLATE)(HIV-1) PVPU_HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  3-34 (BRAIN ISOLATE)(HIV-1) PVPU_HV1BR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  3-33 (BRU ISOLATE)(HIV-1) PVPU_HV1J12 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-33 (HXB2 ISOLATE)(HIV-1) PVPU_HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  3-34 (JRCSF ISOLATE)(HIV-1) PVPU_HV1PV VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS  3-33 TYPE 1 (PV22 ISOLATE)(HIV-1) PVPU_JSRV VPU PROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 116-154 PVPX_LDV VPX PROTEIN LACTATE DEHYDROGENASE- 25-55 ELEVATING VIRUS (LDV) PVPY_BIV2 ORF-Y PROTEIN BOVINE IMMUNODEFICIENCY VIRUS 35-71 (ISOLATE 127)(BIV) PVRNA_BSMV ALPHA-A PROTEIN BARLEY STRIPE MOSAIC VIRUS (BSMV) 290-319 676-705 PVS05_ROTH1 NONSTRUCTURAL PROTEIN HUMAN ROTAVIRUS (STRAIN IGV-80-3) 198-230 NCVP2 PVS05_ROTPC NONSTRUCTURAL PROTEIN NS53 PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN)  88-119 358-392 PVS05_ROTS1 NONSTRUCTURAL PROTEIN- SIMIAN 11 ROTAVIRUS (STRAIN SA11) 315-347 NCVP2 PVS06_ROTBR VP6 PROTEIN BOVINE ROTAVIRUS (STRAIN RF) 55-92 PVS06_ROTBS VP6 PROTEIN BOVINE ROTAVIRUS (GROUP C/STRAIN SHINTOKU) 64-92 312-340 PVS06_ROTBU VP6 PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 55-92 PVS06_ROTEF VP6 PROTEIN EQUINE ROTAVIRUS (STRAIN FI-14) 55-92 PVS06_ROTEH VP6 PROTEIN EQUINE ROTAVIRUS (STRAIN H-2) 55-92 PVS06_ROTH1 VP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN 1076) 55-92 PVS06_ROTHC VP6 PROTEIN HUMAN ROTAVIRUS (GROUP C/STRAIN BRISTOL) 64-92 312-340 PVS06_ROTHS VP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN S2) 55-92 PVS06_ROTHW VP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 55-92 313-349 PVS06_ROTPC VP6 PROTEIN PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 64-92 PVS06_ROTPG VP6 PROTEIN PORCINE ROTAVIRUS (STRAIN GOTTFRIED) 55-92 313-349 PVS06_ROTS1 VP6 PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 55-92 313-349 PVS08_ROTS1 NONSTRUCTURAL PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 274-302 NCVP4 PVS09_ROTHT GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131-159 4/STRAIN ST. THOMAS 3) PVS09_ROTPB GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 4/STRAIN BEN-144) 131-159 PVS10_ROTBN NONSTRUCTURAL GLYCO- BOVINE ROTAVIRUS (STRAIN NCDV) 52-89 PROTEIN NCVP5 PVS10_ROTBU NONSTRUCTURAL GLYCO- BOVINE ROTAVIRUS (STRAIN UK) 52-89 PROTEIN NCVP5 PVS10_ROTH2 NONSTRUCTURAL GLYCO- HUMAN ROTAVIRUS (STRAIN A28) 52-89 PROTEIN NCVP5 PVS10_ROTH7 NONSTRUCTURAL GLYCO- HUMAN ROTAVIRUS (STRAIN A64/CLONE 2) 52-89 PROTEIN NCVP5 PVS10_ROTH8 NONSTRUCTURAL GLYCO- HUMAN ROTAVIRUS (STRAIN A64/CLONE 6 52-89 PROTEIN NCVP5 PSV10_ROTHW NONSTRUCTURAL GLYCO- HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 52-89 PROTEIN NCVP5 PVS10_ROTS1 NONSTRUCTURAL GLYCO- SIMIAN 11 ROTAVIRUS (STRAIN SA11) 52-89 PROTEIN NCVP5 PVS11_ROTHW MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA)  99-130 PVS11_REOVJ SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 2/STRAIN D5/JONES) 346-384 PVS11_REOVL SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 1/STRAIN LANG) 110-147 PVT1_SFVKA PROTEIN T1 PRECURSOR SHOPE FIBROMA VIRUS (STRAIN KASZA)(SFV) 147-182 PVT2_MYXVL TUMOR NECROSIS FACTOR MYXOMA VIRUS (STRAIN LAUSANNE) 261-290 SOLUBLE RECEPTOR PRECUR PVT2_SFVKA TUMOR NECROSIS FACTOR SHOPE FIBROMA VIRUS (STRAIN KASZA)(SFV) 211-249 SOLUBLE RECEPTOR PRECUR PVT3A_CAPV1 PROTEIN T3A CAPRIPOXVIRUS (STRAIN INS-1) 116-150 PVTER_EBV PROBABLE DNA PACK- EPSTEIN-BARR VIRUS (STRAIN 166-199 505-543 AGING PROTEIN B95-8)(HUMAN HERPESVIRUS 4) PVTER_HCMVA PROBABLE DNA PACK- HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 176-209 AGING PROTEIN PVTER_HSV11 PROBABLE DNA PACK- ICTALURID HERPESVIRUS 1 (CHANNEL 756-788 AGING PROTEIN CATFISH VIRUS)(CCV) PVX_SEND6 X PROTEIN SENDAI VIRUS (STRAIN 6/94) 57-93 PY104_ADE07 HYPOTHETICAL 10.4 KD HUMAN ADENOVIRUS TYPE 7 55-83 EARLY PROTEIN PY10K_MSVS HYPOTHETICAL 10.9 KD PROTEIN MAIZE STREAK VIRUS 24-54 (SOUTH-AFRICAN ISOLATE)(MSV) PY10K_WDV HYPOTHETICAL 10 KD PROTEIN WHEAT DWARF VIRUS (WDV) 22-59 PY119_SSV1 HYPOTHETICAL 11.9 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 29-64 PY11K_PASV HYPOTHETICAL 11.9 KD PROTEIN PANICUM STREAK VIRUS 29-61 (ORF VI) PY11K_ROTS1 HYPOTHETICAL 11 KD PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 53-87 IN SEGMENT S11 PY11K_TYDVA HYPOTHETICAL 11.2 KD PROTEIN TOBACCO YELLOW DWARF VIRUS 28-62 (STRAIN AUSTRALIA)(TYDV) PY14K_NPVAC HYPOTHETICAL 13.8 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR POLY-  65-101 IN 39 KD PROTEIN 5′REG HEDROSIS VIRUS (ACMNPV) PY18K_SSV1 HYPOTHETICAL 18.0 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 100-132 (ORF B-166) PY20K_SSV1 HYPOTHETICAL 20.4 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 129-167 (ORF E-178) PY21K_MSVN HYPOTHETICAL 21.7 KD PROTEIN MAIZE STREAK VIRUS (NIGERIAN ISOLATE)(MSV) 122-155 PY2_SOCMV HYPOTHETICAL PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS  99-137 2 (ORF 11) PY38K_NPVAC HYPOTHETICAL 37.7 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 250-282 (ORF2) POLYHEDROSIS VIRUS (ACMNPV) PY85K_SSV1 HYPOTHETICAL 85.7 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 274-312 543-580 (ORF C-792) PYB13_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 114-150 ORF13 PROTEIN (FRAGMENT) PYDH1_HSVSC HYPOTHETICAL 28.7 KD PROTEIN HERPESVIRUS SAIMIRI (SUBGROUP C/STRAIN 488) 206-244 IN DHFR 3′REGION (ORF PYDH3_HSVSC HYPOTHETICAL 9.5 KD PROTEIN HERPESVIRUS SAIMIRI (SUBGROUP C/STRAIN 488) 69-97 IN DHFR 3′REGION (ORF3) PYEC4_EBV HYPOTHETICAL EC-RF4 PROTEIN EPSTEIN-BARR VIRUS (STRAIN 34-68 B95-8)(HUMAN HERPESVIRUS 4) PYIO1_CVBM HYPOTHETICAL PROTEIN IORF1 BOVINE CORONAVIRUS  84-122 PYIOR_CVBF HYPOTHETICAL PROTEIN IN BOVINE CORONAVIRUS (STRAIN F15) 41-75 137-165 NUCLEOCAPSID ORF (IORF) PYIOR_CVBM HYPOTHETICAL PROTEIN IN BOVINE CORONAVIRUS (STRAIN MEBUS) 41-74 137-165 NUCLEOCAPSID ORF (IORF) PYIOR_CVTKE HYPOTHETICAL PROTEIN IN TURKEY ENTERIC CORONAVIRUS (TCV) 41-74 137-165 NUCLEOCAPSID ORF (IORF) PYKR2_EBV HYPOTHETICAL BKRF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8)  67-100 (HUMAN HERPESVIRUS 4) PYMR2_EBV BMRF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 250-284 (HUMAN HERPESVIRUS 4) PYOR1_COYMV HYPOTHETICAL 23 KD COMMELINA YELLOW MOTTLE VIRUS (COYMV)  93-130 166-198 PROTEIN (ORF1) PYOR2_COYMV HYPOTHETICAL 15 KD COMMELINA YELLOW MOTTLE VIRUS (COYMV) 23-56 PROTEIN (ORF2) PYOR3_PVXXC HYPOTHETICAL 12 KD POTATO VIRUS X (STRAIN XC)(PVX)  7-39 PROTEIN (ORF3)(FRAGMENT) PYOR3_WCMVM HYPOTHETICAL 13 KD WHITE CLOVER MOSAIC VIRUS (STRAIN M)(WCMV) 63-94 PROTEIN (ORF 3) PYOR3_WCMVO HYPOTHETICAL 13 KD WHITE CLOVER MOSAIC VIRUS (STRAIN O)(WCMV) 64-95 PROTEIN (ORF 3) PYOR5_ADEG1 HYPOTHETICAL 31.5 KD AVIAN ADENOVIRUS GAL1 237-272 PROTEIN (ORF 5) PYORG_TTV1 HYPOTHETICAL 7.1 KD PROTEIN THERMOPROTEUS TENAX VIRUS  5-34 1 (STRAIN KRA1)(TTV1) PYORM_TTV1 HYPOTHETICAL 38.6 THERMOPROTEUS TENAX VIRUS 233-263 KD PROTEIN 1 (STRAIN KRA1)(TTV1) PYORP_TTV1 HYPOTHETICAL 20.2 THERMOPROTEUS TENAX VIRUS  91-124 KD PROTEIN 1 (STRAIN KRA1)(TTV1a) PYP24_RTBV HYPOTHETICAL P24 RICE TUNGRO BACILLIFORM VIRUS (RTBV) 104-133 159-191 PROTEIN (ORF 1 PVP24_RTBVP HYPOTHETICAL P24 RICE TUNGRO BACILLIFORM VIRUS 104-133 159-191 PROTEIN (ORF 1) (ISOLATE PHILIPPINES)(RTBV) PYP47_NPVAC HYPOTHETICAL 43.5 KD AUTOGRAPHA CALIFORNICA NUCLEAR 23-51 PROTEIN IN P47 3′REGION POLYHEDROSIS VIRUS (ACMNPV) PYRF5_HSV6G HYPOTHETICAL PROTEIN RF5 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 180-216 PYRR2_EBV HYPOTHETICAL BRRF2 PROTEIN EPSTEIN-BARR VIRUS 13-42 (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PYSR1_EBV HYPOTHETICAL BSRF1 PROTEIN EPSTEIN-BARR VIRUS  92-120 (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PYTR1_EBV HYPOTHETICAL BTRF1 PROTEIN EPSTEIN-BARR VIRUS 306-336 (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PYVAE_VACCC HYPOTHETICAL 18.2 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 21-53 PYVAL_VACCV HYPOTHETICAL 9.9 KD PROTEIN VACCINIA VIRUS (STRAIN WR), AND VACCINIA 21-49 VIRUS (STRAIN COPENHAGE PYVBC_VACCC HYPOTHETICAL 10.8 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 22-53 PYVDG_VACCV HYPOTHETICAL 10.4 KD PROTEIN VACCINIA VIRUS (STRAIN WR), AND VACCINIA 31-64 VIRUS (STRAIN COPENHAGE PYVEF_VACCC HYPOTHETICAL 12.9 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  8-42 PYVFC_VACCC HYPOTHETICAL 11.6 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  7-35 PZNFP_LYCVA ZINC FINGER PROTEIN LYMPHOCYTIC CHORIOMENINGITIS VIRUS 29-57 (STRAIN ARMSTRONG) PZNFP_LYCVP ZINC FINGER PROTEIN LYMPHOCYTIC CHORIOMENINGITIS VIRUS  8-32 (FRAGMENT) (STRAIN PASTEUR)

TABLE XV RESPIRATORY SYNCYTIAL VIRUS DP107 F2 REGION ANALOG (SEQ ID NO:16) CARBOXY TRUNCATIONS* X-YTS-Z (SEQ ID NO:16) X-YTSV-Z X-YTSVI-Z X-YTSVIT-Z X-YTSVITI-Z X-YTSVITIE-Z X-YTSVITIEL-Z X-YTSVITIELS-Z X-YTSVITIELSN-Z X-YTSVITIELSNI-Z X-YTSVITIELSNIK-Z X-YTSVITIELSNIKE-Z X-YTSVITIELSNIKEN-Z X-YTSVITIELSNIKENK-Z X-YTSVITIELSNIKENKC-Z X-YTSVITIELSNIKENKCN-Z X-YTSVITIELSNIKENKCNG-Z X-YTSVITIELSNIKENKCNGT-Z X-YTSVITIELSNIKENKCNGTD-Z X-YTSVITIELSNIKENKCNGTDA-Z X-YTSVITIELSNIKENKCNGTDAK-Z X-YTSVITIELSNIKENKCNGTDAKV-Z X-YTSVITIELSNIKENKCNGTDAKVK-Z X-YTSVITIELSNIKENKCNGTDAKVKL-Z X-YTSVITIELSNIKENKCNGTDAKVKLI-Z X-YTSVITIELSNIKENKCNGTDAKVKLIK-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQ-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQE-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQEL-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELD-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDK-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKY-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYK-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKN-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNA-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAV-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVT-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTE-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTEL-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQ-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQL-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLL-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLM-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQ-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQS-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z (*The one-letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XVI RESPIRATORY SYNCYTIAL VIRUS F2 DP178/DP107 REGION ANALOG (SEQ ID NO:16) AMINO TRUNCATIONS* X-QST-Z X-MQST-Z X-LMQST-Z X-LLMQST-Z X-QLLMQST-Z X-LQLLMQST-Z X-ELQLLMQST-Z X-TELQLLMQST-Z X-VTELQLLMQST-Z X-AVTELQLLMQST-Z X-NAVTELQLLMQST-Z X-KNAVTELQLLMQST-Z X-YKNAVTELQLLMQST-Z X-KYKNAVTELQLLMQST-Z X-DKYKNAVTELQLLMQST-Z X-LDKYKNAVTELQLLMQST-Z X-ELDKYKNAVTELQLLMQST-Z X-QELDKYKNAVTELQLLMQST-Z X-KQELDKYKNAVTELQLLMQST-Z X-IKQELDKYKNAVTELQLLMQST-Z X-LIKQELDKYKNAVTELQLLMQST-Z X-KLIKQELDKYKNAVTELQLLMQST-Z X-VKLIKQELDKYKNAVTELQLLMQST-Z X-KVKLIKQELDKYKNAVTELQLLMQST-Z X-AKVKLIKQELDKYKNAVTELQLLMQST-Z X-DAKVKLIKQELDKYKNAVTELQLLMQST-Z X-TDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-GTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-NGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-CNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-KCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-NKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-KENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-IKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-NIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-SNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-LSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-ELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-IELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-TIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-ITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-VITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-SVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-TSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z (*The one-letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XVII RESPIRATORY SYNCYTIAL VIRUS F1 DP178 REGION ANALOG (SEQ ID NO:17) CARBOXY TRUNCATIONS* X-FYD-Z (SEQ ID NO:17) X-FYDP-Z X-FYDPL-Z X-FYDPLV-Z X-FYDPLVF-Z X-FYDPLVFP-Z X-FYDPLVFPS-Z X-FYDPLVFPSD-Z X-FYDPLVFPSDE-Z X-FYDPLVFPSDEF-Z X-FYDPLVFPSDEFD-Z X-FYDPLVFPSDEFDA-Z X-FYDPLVFPSDEFDAS-Z X-FYDPLVFPSDEFDASI-Z X-FYDPLVFPSDEFDASIS-Z X-FYDPLVFPSDEFDASISQ-Z X-FYDPLVFPSDEFDASISQV-Z X-FYDPLVFPSDEFDASISQVN-Z X-FYDPLVFPSDEFDASISQVNE-Z X-FYDPLVFPSDEFDASISQVNEK-Z X-FYDPLVFPSDEFDASISQVNEKI-Z X-FYDPLVFPSDEFDASISQVNEKIN-Z X-FYDPLVFPSDEFDASISQVNEKINQ-Z X-FYDPLVFPSDEFDASISQVNEKINQS-Z X-FYDPLVFPSDEFDASISQVNEKINQSL-Z X-FYDPLVFPSDEFDASISQVNEKINQSLA-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAF-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFI-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFIR-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFIRK-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKS-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSD-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDE-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDEL-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-Z (*The one-letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XVIII RESPIRATORY SYNCYTIAL VIRUS F1 DP178 REGION ANALOG (SEQ ID NO:17) AMINO TRUNCATIONS* X-DELL-Z X-SDELL-Z X-KSDELL-Z X-RKSDELL-Z X-IRKSDELL-Z X-FIRKSDELL-Z X-AFIRKSDELL-Z X-LAFIRKSDELL-Z X-SLAFIRKSDELL-Z X-QSLAFIRKSDELL-Z X-NQSLAFIRKSDELL-Z X-INQSLAFIRKSDELL-Z X-KINQSLAFIRKSDELL-Z X-EKINQSLAFIRKSDELL-Z X-NEKINQSLAFIRKSDELL-Z X-VNEKINQSLAFIRKSDELL-Z X-QVNEKINQSLAFIRKSDELL-Z X-SQVNEKINQSLAFIRKSDELL-Z X-ISQVNEKINQSLAFIRKSDELL-Z X-SISQVNEKINQSLAFIRKSDELL-Z X-ASISQVNEKINQSLAFIRKSDELL-Z X-DASISQVNEKINQSLAFIRKSDELL-Z X-FDASISQVNEKINQSLAFIRKSDELL-Z X-EFDASISQVNEKINQSLAFIRKSDELL-Z X-DEFDASISQVNEKINQSLAFIRKSDELL-Z X-SDEFDASISQVNEKINQSLAFIRKSDELL-Z X-PSDEFDASISQVNEKINQSLAFIRKSDELL-Z X-FPSDEFDASISQVNEKINQSLAFIRKSDELL-Z X-VFPSDEFDASISQVNEKINQSLAFIRKSDELL-Z X-LVFPSDEFDASISQVNEKINQSLAFIRKSDELL-Z X-PLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-Z X-DPLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-Z X-YDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-Z (*The one-letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XIX HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP178 ANALOG (SEQ ID NO:18) CARBOXY TRUNCATIONS* X-ITL-Z (SEQ ID NO:18) X-ITLN-Z X-ITLNN-Z X-ITLNNS-Z X-ITLNNSV-Z X-ITLNNSVA-Z X-ITLNNSVAL-Z X-ITLNNSVALD-Z X-ITLNNSVALDP-Z X-ITLNNSVALDPI-Z X-ITLNNSVALDPID-Z X-ITLNNSVALDPIDI-Z X-ITLNNSVALDPIDIS-Z X-ITLNNSVALDPIDISI-Z X-ITLNNSVALDPIDISIE-Z X-ITLNNSVALDPIDISIEL-Z X-ITLNNSVALDPIDISIELN-Z X-ITLNNSVALDPIDISIELNK-Z X-ITLNNSVALDPIDISIELNKA-Z X-ITLNNSVALDPIDISIELNKAK-Z X-ITLNNSVALDPIDISIELNKAKS-Z X-ITLNNSVALDPIDISIELNKAKSD-Z X-ITLNNSVALDPIDISIELNKAKSDL-Z X-ITLNNSVALDPIDISIELNKAKSDLE-Z X-ITLNNSVALDPIDISIELNKAKSDLEE-Z X-ITLNNSVALDPIDISIELNKAKSDLEES-Z X-ITLNNSVALDPIDISIELNKAKSDLEESK-Z X-ITLNNSVALDPIDISIELNKAKSDLEESKE-Z X-ITLNNSVALDPIDISIELNKAKSDLEESKEW-Z X-ITLNNSVALDPIDISIELNKAKSDLEESKEWI-Z X-ITLNNSVALDPIDISIELNKAKSDLEESKEWIR-Z X-ITLNNSVALDPIDISIELNKAKSDLEESKEWIRR-Z X-ITLNNSVALDPIDISIELNKAKSDLEESKEWIRRS-Z (*The one-letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XX HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP178 ANALOG (SEQ ID NO:18) AMINO TRUNCATIONS* X-RRS-Z X-IRRS-Z X-WIRRS-Z X-EWIRRS-Z X-KEWIRRS-Z X-SKEWIRRS-Z X-ESKEWIRRS-Z X-EESKEWIRRS-Z X-LEESKEWIRRS-Z X-DLEESKEWIRRS-Z X-SDLEESKEWIRRS-Z X-KSDLEESKEWIRRS-Z X-AKSDLEESKEWIRRS-Z X-KAKSDLEESKEWIRRS-Z X-NKAKSDLEESKEWIRRS-Z X-LNKAKSDLEESKEWIRRS-Z X-ELNKAKSDLEESKEWIRRS-Z X-IELNKAKSDLEESKEWIRRS-Z X-SIELNKAKSDLEESKEWIRRS-Z X-ISIELNKAKSDLEESKEWIRRS-Z X-DISIELNKAKSDLEESKEWIRRS-Z X-IDISIELNKAKSDLEESKEWIRRS-Z X-PIDISIELNKAKSDLEESKEWIRRS-Z X-DPIDISIELNKAKSDLEESKEWIRRS-Z X-LDPIDISIELNKAKSDLEESKEWIRRS-Z X-ALDPIDISIELNKAKSDLEESKEWIRRS-Z X-VALDPIDISIELNKAKSDLEESKEWIRRS-Z X-SVALDPIDISIELNKAKSDLEESKEWIRRS-Z X-NSVALDPIDISIELNKAKSDLEESKEWIRRS-Z X-NNSVALDPIDISIELNKAKSDLEESKEWIRRS-Z X-LNNSVALDPIDISIELNKAKSDLEESKEWIRRS-Z X-TLNNSVALDPIDISIELNKAKSDLEESKEWIRRS-Z (*The one-letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XXI HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP107 ANALOG (SEQ ID NO:19) CARBOXY TRUNCATIONS* X-ALG-Z (SEQ ID NO:19) X-ALGV-Z X-ALGVA-Z X-ALGVAT-Z X-ALGVATS-Z X-ALGVATSA-Z X-ALGVATSAQ-Z X-ALGVATSAQI-Z X-ALGVATSAQIT-Z X-ALGVATSAQITA-Z X-ALGVATSAQITAA-Z X-ALGVATSAQITAAV-Z X-ALGVATSAQITAAVA-Z X-ALGVATSAQITAAVAL-Z X-ALGVATSAQITAAVALV-Z X-ALGVATSAQITAAVALVE-Z X-ALGVATSAQITAAVALVEA-Z X-ALGVATSAQITAAVALVEAK-Z X-ALGVATSAQITAAVALVEAKQ-Z X-ALGVATSAQITAAVALVEAKQA-Z X-ALGVATSAQITAAVALVEAKQAR-Z X-ALGVATSAQITAAVALVEAKQARS-Z X-ALGVATSAQITAAVALVEAKQARSD-Z X-ALGVATSAQITAAVALVEAKQARSDI-Z X-ALGVATSAQITAAVALVEAKQARSDIE-Z X-ALGVATSAQITAAVALVEAKQARSDIEK-Z X-ALGVATSAQITAAVALVEAKQARSDIEKL-Z X-ALGVATSAQITAAVALVEAKQARSDIEKLK-Z X-ALGVATSAQITAAVALVEAKQARSDIEKLKE-Z X-ALGVATSAQITAAVALVEAKQARSDIEKLKEA-Z X-ALGVATSAQITAAVALVEAKQARSDIEKLKEAI-Z X-ALGVATSAQITAAVALVEAKQARSDIEKLKEAIR-Z (*The one letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XXII HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP107 ANALOG (SEQ ID NO:19) AMINO TRANCATIONS* X-IRD-Z X-AIRD-Z X-EAIRD-Z X-KEAIRD-Z X-LKEAIRD-Z X-KLKEAIRD-Z X-EKLKEAIRD-Z X-IEKLKEAIRD-Z X-DIEKLKEAIRD-Z X-SDIEKLKEAIRD-Z X-RSDIEKLKEAIRD-Z X-ARSDIEKLKEAIRD-Z X-QARSDIEKLKEAIRD-Z X-KQARSDIEKLKEAIRD-Z X-AKQARSDIEKLKEAIRD-Z X-EAKQARSDIEKLKEAIRD-Z X-VEAKQARSDIEKLKEAIRD-Z X-LVEAKQARSDIEKLKEAIRD-Z X-ALVEAKQARSDIEKLKEAIRD-Z X-VALVEAKQARSDIEKLKEAIRD-Z X-AVALVEAKQARSDIEKLKEAIRD-Z X-AAVALVEAKQARSDIEKLKEAIRD-Z X-TAAVALVEAKQARSDIEKLKEAIRD-Z X-ITAAVALVEAKQARSDIEKLKEAIRD-Z X-QITAAVALVEAKQARSDIEKLKEAIRD-Z X-AQITAAVALVEAKQARSDIEKLKEAIRD-Z X-SAQITAAVALVEAKQARSDIEKLKEAIRD-Z X-TSAQITAAVALVEAKQARSDIEKLKEAIRD-Z X-ATSAQITAAVALVEAKQARSDIEKLKEAIRD-Z X-VATSAQITAAVALVEAKQARSDIEKLKEAIRD-Z X-GVATSAQITAAVALVEAKQARSDIEKLKEAIRD-Z X-LGVATSAQITAAVALVEAKQARSDIEKLKEAIRD-Z (*The one letter amino acid code is used.)

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XXIII REPRESENTATIVE DP107/DP178 ANALOG ANTIVIRAL PEPTIDES Anti-Respiratory syncytial virus peptides X-TSVITIELSNIKENKCNGTDAKVKLIKQELDKYKN-Z X-SVITIELSNIKENKCNGTDAKVKLIKQELDKYKNA-Z X-VITIELSNIKENKCNGTDAKVKLIKQELDKYKNAV-Z X-VAVSKVLHLEGEVNKIALLSTNKAVVSLSNGVS-Z (SEQ ID NO:21) X-AVSKVLHLEGEVNKIALLSTNKAVVSLSNGVSV-Z (SEQ ID NO:22) X-VSKVLHLEGEVNKIALLSTNKAVVSLSNGVSVL-Z (SEQ ID NO:23) X-SKVLHLEGEVNKIALLSTNKAVVSLSNGVSVLT-Z (SEQ ID NO:24) X-KVLHLEGEVNKIALLSTNKAVVSLSNGVSVLTS-Z (SEQ ID NO:25) X-LEGEVNKIALLSTNKAVVSLSNGVSVLTSKVLD-Z (SEQ ID NO:26) X-GEVNKIALLSTNKAVVSLSNGVSVLTSKVLDLK-Z (SEQ ID NO:27) X-EVNKIALLSTNKAVVSLSNGVSVLTSKVLDLKN-Z (SEQ ID NO:28) X-VNKIALLSTNKAVVSLSNGVSVLTSKVLDLKNY-Z (SEQ ID NO:29) X-NKIALLSTNKAVVSLSNGVSVLTSKVLDLKNYI-Z (SEQ ID NO:30) X-KIALLSTNKAVVSLSNGVSVLTSKVLDLKNYID-Z (SEQ ID NO:31) X-IALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDK-Z (SEQ ID NO:32) X-ALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQ-Z (SEQ ID NO:20) X-VAVSKVLHLEGEVNKIALLSTNKAVVSLSNGVS-Z X-AVSKVLHLEGEVNKIALLSTNKAVVSLSNGVSV-Z X-VSKVLHLEGEVNKIALLSTNKAVVSLSNGVSVL-Z X-SKVLHLEGEVNKIALLSTNKAVVSLSNGVSVLT-Z X-KVLHLEGEVNKIALLSTNKAVVSLSNGVSVLTS-Z X-LEGEVNKIALLSTNKAVVSLSNGVSVLTSKVLD-Z X-GEVNKIALLSTNKAVVSLSNGVSVLTSKVLDLK-Z X-EVNKIALLSTNKAVVSLSNGVSVLTSKVLDLKN-Z X-VNKIALLSTNKAVVSLSNGVSVLTSKVLDLKNY-Z X-NKIALLSTNKAVVSLSNGVSVLTSKVLDLKNYI-Z X-KIALLSTNKAVVSLSNGVSVLTSKVLDLKNYID-Z X-IALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDK-Z X-ALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQ-Z (SEQ ID NOS: 210-238, respectively) Anti-human parainfluenza virus 3 peptides (SEQ ID NO:33) X-TLNNSVALKPIDISIELNKAKSDLEESKEWIRRSN-Z (SEQ ID NO:34) X-LNNSVALDPIDISIELNKAKSDLEESKEWIRRSNQ-Z (SEQ ID NO:35) X-NNSVALDPIDISIELNKAKSDLEESKEWIRRSNQK-Z (SEQ ID NO:36) X-NSVALDPIDISIELNKAKSDLEESKEWIRRSNQKL-Z (SEQ ID NO:37) X-SVALDPIDISIELNKAKSDLEESKEWIRRSNQKLD-Z (SEQ ID NO:38) X-VALDPIDISIELNKAKSDLEESKEWIRRSNQKLDS-Z (SEQ ID NO:39) X-ALDPIDISIELNKAKSDLEESKEWIRRSNQKLDSI-Z (SEQ ID NO:40) X-LDPIDISIELNKAKSDLEESKEWIRRSNQKLDSIG-Z (SEQ ID NO:41) X-DPIDISIELNKAKSDLEESKEWIRRSNQKLDSIGN-Z (SEQ ID NO:42) X-PIDISIELNKAKSDLEESKEWIRRSNQKLDSIGNW-Z (SEQ ID NO:43) X-IDISIELNKAKSDLEESKEWIRRSNQKLDSIGNWH-Z (SEQ ID NO:44) X-DISIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQ-Z (SEQ ID NO:45) X-ISIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQS-Z (SEQ ID NO:46) X-SIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSS-Z (SEQ ID NO:47) X-IELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSST-Z (SEQ ID NO:48) X-ELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSSTT-Z (SEQ ID NO:49) X-TAAVALVEAKQARSDIEKLKEAIRDTNKAVQSVQS-Z (SEQ ID NO:50) X-AVALVEAKQARSDIEKLKEAIRDTNKAVQSVQSSI-Z (SEQ ID NO:51) X-LVEAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNL-Z (SEQ ID NO:52) X-VEAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLI-Z (SEQ ID NO:53) X-EAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIV-Z (SEQ ID NO:54) X-AKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVA-Z (SEQ ID NO:55) X-KQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAI-Z (SEQ ID NO:56) X-QARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIK-Z (SEQ ID NO:57) X-ARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKS-Z (SEQ ID NO:58) X-RSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSV-Z (SEQ ID NO:59) X-SDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQ-Z (SEQ ID NO:60) X-KLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVN-Z (SEQ ID NO:61) X-LKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNK-Z (SEQ ID NO:62) X-AIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNKEIV-Z Anti-simian immunodeficiency virus peptides (SEQ ID NO:63) X-WQEWERKVDFLEENITALLEEAQIQQEKNMYELQK-Z (SEQ ID NO:64) X-QEWERKVDFLEENITALLEEAQIQQEKNMYELQKL-Z (SEQ ID NO:65) X-EWERKVDFLEENITALLEEAQIQQEKNMYELQKLN-Z (SEQ ID NO:66) X-WERKVDFLEENITALLEEAQIQQEKNMYELQKLNS-Z (SEQ ID NO:67) X-ERKVDFLEENITALLEEAQIQQEKNMYELQKLNSW-Z (SEQ ID NO:68) X-RKVDFLEENITALLEEAQIQQEKNMYELQKLNSWD-Z (SEQ ID NO:69) X-KVDFLEENITALLEEAQIQQEKNMYELQKLNSWDV-Z (SEQ ID NO:70) X-VDFLEENITALLEEAQIQQEKNMYELQKLNSWDVF-Z (SEQ ID NO:71) X-DFLEENITALLEEAQIQQEKNMYELQKLNSWDVFG-Z (SEQ ID NO:72) X-FLEENITALLEEAQIQQEKNMYELQKLNSWDVFGN-Z Anti-measles virus peptides (SEQ ID NO:73) X-LHRIDLGPPISLERLDVGTNLGNAIAKLEAKELL-Z (SEQ ID NO:74) X-HRIDLGPPISLERLDVGTNLGNAIAKLEAKELLE-Z (SEQ ID NO:75) X-RIDLGPPISLERLDVGTNLGNAIAKLEAKELLES-Z (SEQ ID NO:76) X-IDLGPPISLERLDVGTNLGNAIAKLEAKELLESS-Z (SEQ ID NO:77) X-DLGPPISLERLDVGTNLGNAIAKLEAKELLESSD-Z (SEQ ID NO:78) X-LGPPISLERLDVGTNLGNAIAKLEAKELLESSDQ-Z (SEQ ID NO:79) X-GPPISLERLDVGTNLGNAIAKLEAKELLESSDQI-Z (SEQ ID NO:80) X-PPISLERLDVGTNLGNAIAKLEAKELLESSDQIL-Z (SEQ ID NO:81) X-PISLERLDVGTNLGNAIAKLEAKELLESSDQILR-Z (SEQ ID NO:82) X-SLERLDVGTNLGNAIAKLEAKELLESSDQILRSM-Z (SEQ ID NO:83) X-LERLDVGTNLGNAIAKLEAKELLESSDQILRSMK-Z The one letter amino acid code is used.

Additionally,

“X” may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

5.4. SYNTHESIS OF PEPTIDES

The peptides of the invention may be synthesized or prepared by techniques well known in the art. See, for example, Creighton, 1983, Proteins: Structures and Molecular Principles, W.H. Freeman and Co., NY, which is incorporated herein by reference in its entirety. Short peptides, for example, can be synthesized on a solid support or in solution. Longer peptides may be made using recombinant DNA techniques. Here, the nucleotide sequences encoding the peptides of the invention may be synthesized, and/or cloned, and expressed according to techniques well known to those of ordinary skill in the art. See, for example, Sambrook, et al., 1989, Molecular Cloning, A Laboratory Manual, Vols. 1-3, Cold Spring Harbor Press, N.Y.

The peptides of the invention may alternatively be synthesized such that one or more of the bonds which link the amino acid residues of the peptides are non-peptide bonds. These alternative non-peptide bonds may be formed by utilizing reactions well known to those in the art, and may include, but are not limited to imino, ester, hydrazide, semicarbazide, and azo bonds, to name but a few. In yet another embodiment of the invention, peptides comprising the sequences described above may be synthesized with additional chemical groups present at their amino and/or carboxy termini, such that, for example, the stability, bioavailability, and/or inhibitory activity of the peptides is enhanced. For example, hydrophobic groups such as carbobenzoxyl, dansyl, or t-butyloxycarbonyl groups, may be added to the peptides amino termini. Likewise, an acetyl group or a 9-fluorenylmethoxy-carbonyl group may be placed at the peptides' amino termini. (See “X” in Tables I to IV, above.) Additionally, the hydrophobic group, t-butyloxycarbonyl, or an amido group may be added to the peptides' carboxy termini. (See “Z” in Tables I to IV, above.)

Further, the peptides of the invention may be synthesized such that their steric configuration is altered. For example, the D-isomer of one or more of the amino acid residues of the peptide may be used, rather than the usual L-isomer.

Still further, at least one of the amino acid residues of the peptides of the invention may be substituted by one of the well known non-naturally occurring amino acid residues. Alterations such as these may serve to increase the stability, bioavailability and/or inhibitory action of the peptides of the invention.

Any of the peptides described above may, additionally, have a macromolecular carrier group covalently attached to their amino and/or carboxy termini. Such macromolecular carrier groups may include, for example, lipid-fatty acid conjugates, polyethylene glycol, carbohydrates or additional peptides. “X”, in Tables I to IV, above, may therefore additionally represent any of the above macromolecular carrier groups covalently attached to the amino terminus of a peptide, with an additional peptide group being preferred. Likewise, “Z”, in Tables I to IV, may additionally represent any of the macromolecular carrier groups described above.

5.5. ASSAYS FOR ANTI-MEMBRANE FUSION ACTIVITY

Described herein, are methods for ability of a compound, such as the peptides of the invention, to inhibit membrane fusion events. Specifically, assays for cell fusion events are described in Section 5.5.1, below, and assays for antiviral activity are described in Section 5.5.2, below.

5.5.1 ASSAYS FOR CELL FUSION EVENTS

Assays for cell fusion events are well known to those of skill in the art, and may be used in conjunction, for example, with the peptides of the invention to test the peptides' antifusogenic capabilities.

Cell fusion assays are generally performed in vitro. Such an assay may comprise culturing cells which, in the absence of any treatment would undergo an observable level of syncytial formation. For example, uninfected cells may be incubated in the presence of cells chronically infected with a virus that induces cell fusion. Such viruses may include, but are not limited to, HIV, SIV, or respiratory syncytial virus.

For the assay, cells are incubated in the presence of a peptide to be assayed. For each peptide, a range of peptide concentrations may be tested. This range should include a control culture wherein no peptide has been added.

Standard conditions for culturing cells, well known to those of ordinary skill in the art, are used. After incubation for an appropriate period (24 hours at 37° C., for example) the culture is examined microscopically for the presence of multinucleated giant cells, which are indicative of cell fusion and syncytial formation. Well known stains, such as crystal violet stain, may be used to facilitate the visualization of syncytial formation.

5.5.2 ASSAYS FOR ANTIVIRAL ACTIVITY

The antiviral activity exhibited by the peptides of the invention may be measured, for example, by easily performed in vitro assays, such as those described below, which can test the peptides' ability to inhibit syncytia formation, or their ability to inhibit infection by cell-free virus. Using these assays, such parameters as the relative antiviral activity of the peptides, exhibit against a given strain of virus and/or the strain specific inhibitory activity of the peptide can be determined.

A cell fusion assay may be utilized to test the peptides' ability to inhibit viral-induced, such as HIV-induced, syncytia formation in vitro. Such an assay may comprise culturing uninfected cells in the presence of cells chronically infected with a syncytial-inducing virus and a peptide to be assayed. For each peptide, a range of peptide concentrations may be tested. This range should include a control culture wherein no peptide has been added. Standard conditions for culturing, well known to those of ordinary skill in the art, are used. After incubation for an appropriate period (24 hours at 37° C., for example) the culture is examined microscopically for the presence of multinucleated giant cells, which are indicative of cell fusion and syncytia formation. Well known stains, such as crystal violet stain, may be used to facilitate syncytial visualization. Taking HIV as an example, such an assay would comprise CD-4⁺ cells (such as Molt or CEM cells, for example) cultured in the presence of chronically HIV-infected cells and a peptide to be assayed.

Other well known characteristics of viral infection may also be assayed to test a peptide's antiviral capabilities. Once again taking HIV as an example, a reverse transcriptase (RT) assay may be utilized to test the peptides' ability to inhibit infection of CD-4⁺ cells by cell-free HIV. Such an assay may comprise culturing an appropriate concentration (i.e., TCID₅₀) of virus and CD-4⁺ cells in the presence of the peptide to be tested. Culture conditions well known to those in the art are used. As above, a range of peptide concentrations may be used, in addition to a control culture wherein no peptide has been added. After incubation for an appropriate period (e.g., 7 days) of culturing, a cell-free supernatant is prepared, using standard procedures, and tested for the present of RT activity as a measure of successful infection. The RT activity may be tested using standard techniques such as those described by, for example, Goff et al. (Goff, S. et al., 1981, J. Virol. 38:239-248) and/or Willey et al. (Willey, R. et al., 1988, J. Virol. 62:139-147). These references are incorporated herein by reference is in their entirety.

Standard methods which are well-known to those of skill in the art may be utilized for assaying non-retroviral activity. See, for example, Pringle et al. (Pringle, C. R. et al., 1985, J. Medical Virology 17:377-386) for a discussion of respiratory syncytial virus and parainfluenza virus activity assay techniques. Further, see, for example, “Zinsser Microbiology”, 1988, Joklik, W. K. et al., eds., Appleton & Lange, Norwalk, Conn., 19th ed., for a general review of such techniques. These references are incorporated by reference herein in their entirety. In addition, the Examples presented below, in Sections 17, 18, 26 and 27 each provide additional assays for the testing of a compound's antiviral capability.

In vivo assays may also be utilized to test, for example, the antiviral activity of the peptides of the invention. To test for anti-HIV activity, for example, the in vivo model described in Barnett et al. (Barnett, S. W. et al., 1994, Science 266:642-646) may be used.

Additionally, anti-RSV activity can be assayed in vivo via well known mouse models. For example, RSV can be administered intranasally to mice of various inbred strains. Virus replicates in lungs of all strains, but the highest titers are obtained in P/N, C57L/N and DBA/2N mice. Infection of BALB/c mice produces an asymptomatic bronchiolitis characterized by lymphocytic infiltrates and pulmonary virus titers of 10⁴ to 10⁵ pfu/g of lung tissue (Taylor, G. et al., 1984, Infect. Immun. 43:649-655).

Cotton rat models of RSV are also well known. Virus replicates to high titer in the nose and lungs of the cotton rat but produces few if any signs of inflammation.

5.6. USES OF THE PEPTIDES OF THE INVENTION

The peptides of the invention may be utilized as antifusogenic or antiviral compounds, or as compounds which modulate intracellular processes involving coiled coil peptide structures. Further, such peptides may be used to identify agents which exhibit antifusogenic, antiviral or intracellular modulatory activity. Still further, the peptides of the invention may be utilized as organism or viral type/subtype-specific diagnostic tools.

The antifusogenic capability of the peptides of the invention may additionally be utilized to inhibit or treat/ameliorate symptoms caused by processes involving membrane fusion events. Such events may include, for example, virus transmission via cell-cell fusion, abnormal neurotransmitter exchange via cell-fusion, and sperm-egg fusion. Further, the peptides of the invention may be used to inhibit free viral, such as retroviral, particularly HIV, transmission to uninfected cells wherein such viral infection involves membrane fusion events or involves fusion of a viral structure with a cell membrane. Among the intracellular disorders involving coiled coil peptides structures which may be ameliorated by the peptides of the invention are disorders involving, for example, bacterial toxins.

With respect to antiviral activity, the viruses whose transmission may be inhibited by the peptides of the invention include, but are not limited to all strains of the viruses listed above, in Tables V through VII, and IX through XIV.

These viruses include, for example, human retroviruses, particularly HIV-1 and HIV-2 and the human T-lymphocyte viruses (HTLV-I and II). The non-human retroviruses whose transmission may be inhibited by the peptides of the invention include, but are not limited to bovine leukosis virus, feline sarcoma and leukemia viruses, simian immunodeficiency, sarcoma and leukemia viruses, and sheep progress pneumonia viruses.

Non retroviral viruses whose transmission may be inhibited by the peptides of the invention include, but are not limited to human respiratory syncytial virus, canine distemper virus, newcastle disease virus, human parainfluenza virus, influenza viruses, measles viruses, Epstein-Barr viruses, hepatitis B viruses, and simian Mason-Pfizer viruses.

Non enveloped viruses whose transmission may be inhibited by the peptides of the invention include, but are not limited to picornaviruses such as polio viruses, hepatitis A virus, enterovirus, echoviruses and coxsackie viruses, papovaviruses such as papilloma virus, parvoviruses, adenoviruses and reoviruses.

As discussed more fully, below, in Section 5.5.1 and in the Example presented, below, in Section 8, DP107, DP178, DP107 analog and DP178 analog peptides form non-covalent protein-protein interactions which are required for normal activity of the virus. Thus, the peptides of the invention may also be utilized as components in assays for the identification of compounds that interfere with such protein-protein interactions and may, therefore, act as antiviral agents. These assays are discussed, below, in Section 5.5.1.

As demonstrated in the Example presented below in Section 6, the antiviral activity of the peptides of the invention may show a pronounced type and subtype specificity, i.e., specific peptides may be effective in inhibiting the activity of only specific viruses. This feature of the invention presents many advantages. One such advantage, for example, lies in the field of diagnostics, wherein one can use the antiviral specificity of the peptide of the invention to ascertain the identity of a viral isolate. With respect to HIV, one may easily determine whether a viral isolate consists of an HIV-1 or HIV-2 strain. For example, uninfected CD-4⁺ cells may be co-infected with an isolate which has been identified as containing HIV the DP178 (SEQ ID:1) peptide, after which the retroviral activity of cell supernatants may be assayed, using, for example, the techniques described above in Section 5.2. Those isolates whose retroviral activity is completely or nearly completely inhibited contain HIV-1. Those isolates whose viral activity is unchanged or only reduced by a small amount, may be considered to not contain HIV-1. Such an isolate may then be treated with one or more of the other DP178 peptides of the invention, and subsequently be tested for its viral activity in order to determine the identify of the viral isolate. The DP107 and DP178 analogs of the invention may also be utilized in a diagnostic capacity specific to the type and subtype of virus or organism in which the specific peptide sequence is found. A diagnostic procedure as described, above, for DP178, may be used in conjunction with the DP107/DP178 analog of interest.

5.5.1. SCREENING ASSAYS

As demonstrated in the Example presented in Section 8, below, DP107 and DP178 portions of the TM protein gp41 form non-covalent protein-protein interactions. As is also demonstrated, the maintenance of such interactions is necessary for normal viral infectivity. Thus, compounds which bind DP107, bind DP178, and/or act to disrupt normal DP107/DP178 protein-protein interactions may act as antifusogenic, antiviral or cellular modulatory agents. Described below are assays for the identification of such compounds. Note that, while, for ease and clarity of discussion, DP107 and DP178 peptides will be used as components of the assays described, but it is to be understood that any of the DP107 analog or DP178 analog peptides described, above, in Sections 5.1 through 5.3 may also be utilized as part of these screens for compounds.

Compounds which may be tested for an ability to bind DP107, DP178, and/or disrupt DP107/DP178 interactions, and which therefore, potentially represent antifusogenic, antiviral or intracellular modulatory compounds, include, but are not limited to, peptides made of D- and/or L-configuration amino acids (in, for example, the form of random peptide libraries; see Lam, K. S. et al., 1991, Nature 354:82-84), phosphopeptides (in, for example, the form of random or partially degenerate, directed phosphopeptide libraries; see, for example, Songyang, Z. et al., 1993, Cell 72:767-778), antibodies, and small organic or inorganic molecules. Synthetic compounds, natural products, and other sources of potentially effective materials may be screened in a variety of ways, as described in this Section.

The compounds, antibodies, or other molecules identified may be tested, for example, for an ability to inhibit cell fusion or viral activity, utilizing, for example, assays such as those described, above, in Section 5.5.

Among the peptides which may be tested are soluble peptides comprising DP107 and/or DP178 domains, and peptides comprising DP107 and/or DP178 domains having one or more mutations within one or both of the domains, such as the M41-P peptide described, below, in the Example presented in Section 8, which contains a isoleucine to proline mutation within the DP178 sequence.

In one embodiment of such screening methods is a method for identifying a compound to be tested for antiviral ability comprising:

(a) exposing at least one compound to a peptide comprising a DP107 peptide for a time sufficient to allow binding of the compound to the DP107 peptide;

(b) removing non-bound compounds; and

(c) determining the presence of the compound bound to the DP107 peptide, thereby identifying an agent to be tested for antiviral ability.

In a second embodiment of such screening methods is a method for identifying a compound to be tested for antiviral ability comprising:

(a) exposing at least one compound to a peptide comprising a DP178 peptide for a time sufficient to allow binding of the compound to the DP178 peptide;

(b) removing non-bound compounds; and

(c) determining the presence of the compound bound to the DP178 peptide, thereby identifying an agent to be tested for antiviral ability.

One method utilizing these types of approaches that may be pursued in the isolation of such DP107-binding or DP178-binding compounds is an assay which would include the attachment of either the DP107 or the DP178 peptide to a solid matrix, such as, for example, agarose or plastic beads, microtiter plate wells, petri dishes, or membranes composed of, for example, nylon or nitrocellulose. In such an assay system, either the DP107 or DP178 protein may be anchored onto a solid surface, and the compound, or test substance, which is not anchored, is labeled, either directly or indirectly. In practice, microtiter plates are conveniently utilized. The anchored component may be immobilized by non-covalent or covalent attachments. Non-covalent attachment may be accomplished simply by coating the solid surface with a solution of the protein and drying.

Alternatively, an immobilized antibody, preferably a monoclonal antibody, specific for the protein may be used to anchor the protein to the solid surface. The surfaces may be prepared in advance and stored.

In order to conduct the assay, the labeled compound is added to the coated surface containing the anchored DP107 or DP178 peptide. After the reaction is complete, unreacted components are removed (e.g., by washing) under conditions such that any complexes formed will remain immobilized on the solid surface. The detection of complexes anchored on the solid surface can be accomplished in a number of ways. Where the compound is pre-labeled, the detection of label immobilized on the surface indicates that complexes were formed. Where the labeled component is not pre-labeled, an indirect label can be used to detect complexes anchored on the surface; e.g., using a labeled antibody specific for the compound (the antibody, in turn, may be directly labeled or indirectly labeled with a labeled anti-Ig antibody).

Alternatively, such an assay can be conducted in a liquid phase, the reaction products separated from unreacted components, and complexes detected; e.g., using an immobilized antibody specific for DP107 or DP178, whichever is appropriate for the given assay, or ab antibody specific for the compound, i.e., the test substance, in order to anchor any complexes formed in solution, and a labeled antibody specific for the other member of the complex to detect anchored complexes.

By utilizing procedures such as this, large numbers of types of molecules may be simultaneously screened for DP107 or DP178-binding capability, and thus potential antiviral activity.

Further, compounds may be screened for an ability to inhibit the formation of or, alternatively, disrupt DP107/DP178 complexes. Such compounds may then be tested for antifusogenic, antiviral or intercellular modulatory capability. For ease of description, DP107 and DP178 will be referred to as “binding partners.” Compounds that disrupt such interactions may exhibit antiviral activity. Such compounds may include, but are not limited to molecules such as antibodies, peptides, and the like described above.

The basic principle of the assay systems used to identify compounds that interfere with the interaction between the DP107 and DP178 peptides involves preparing a reaction mixture containing peptides under conditions and for a time sufficient to allow the two peptides to interact and bind, thus forming a complex. In order to test a compound for disruptive activity, the reaction is conducted in the presence and absence of the test compound, i.e., the test compound may be initially included in the reaction mixture, or added at a time subsequent to the addition of one of the binding partners; controls are incubated without the test compound or with a placebo. The formation of any complexes between the binding partners is then detected. The formation of a complex in the control reaction, but not in the reaction mixture containing the test compound indicates that the compound interferes with the interaction of the DP107 and DP178 peptides.

The assay for compounds that interfere with the interaction of the binding partners can be conducted in a heterogeneous or homogeneous format. Heterogeneous assays involve anchoring one of the binding partners onto a solid phase and detecting complexes anchored on the solid phase at the end of the reaction. In homogeneous assays, the entire reaction is carried out in a liquid phase. In either approach, the order of addition of reactants can be varied to obtain different information about the compounds being tested. For example, test compounds that interfere with the interaction between the binding partners, e.g., by competition, can be identified by conducting the reaction in the presence of the test substance; i.e., by adding the test substance to the reaction mixture prior to or simultaneously with the binding partners. On the other hand, test compounds that disrupt preformed complexes, e.g. compounds with higher binding constants that displace one of the binding partners from the complex, can be tested by adding the test compound to the reaction mixture after complexes have been formed. The various formats are described briefly below.

In a heterogeneous assay system, one binding partner, e.g., either the DP107 or DP178 peptide, is anchored onto a solid surface, and its binding partner, which is not anchored, is labeled, either directly or indirectly. In practice, microtiter plates are conveniently utilized. The anchored species may be immobilized by non-covalent or covalent attachments. Non-covalent attachment may be accomplished simply by coating the solid surface with a solution of the protein and drying. Alternatively, an immobilized antibody specific for the protein may be used to anchor the protein to the solid surface. The surfaces may be prepared in advance and stored.

In order to conduct the assay, the binding partner of the immobilized species is added to the coated surface with or without the test compound. After the reaction is complete, unreacted components are removed (e.g., by washing) and any complexes formed will remain immobilized on the solid surface. The detection of complexes anchored on the solid surface can be accomplished in a number of ways. Where the binding partner was pre-labeled, the detection of label immobilized on the surface indicates that complexes were formed. Where the binding partner is not pre-labeled, an indirect label can be used to detect complexes anchored on the surface; e.g., using a labeled antibody specific for the binding partner (the antibody, in turn, may be directly labeled or indirectly labeled with a labeled anti-Ig antibody). Depending upon the order of addition of reaction components, test compounds which inhibit complex formation or which disrupt preformed complexes can be detected.

Alternatively, the reaction can be conducted in a liquid phase in the presence or absence of the test compound, the reaction products separated from unreacted components, and complexes detected; e.g., using an immobilized antibody specific for one binding partner to anchor any complexes formed in solution, and a labeled antibody specific for the other binding partner to detect anchored complexes. Again, depending upon the order of addition of reactants to the liquid phase, test compounds which inhibit complex or which disrupt preformed complexes can be identified.

In an alternate embodiment of the invention, a homogeneous assay can be used. In this approach, a preformed complex of the DP107 and DP178 peptides is prepared in which one of the binding partners is labeled, but the signal generated by the label is quenched due to complex formation (see, e.g., U.S. Pat. No. 4,109,496 by Rubenstein which utilizes this approach for immunoassays). The addition of a test substance that competes with and displaces one of the binding partners from the preformed complex will result in the generation of a signal above background. In this way, test substances which disrupt DP-107/DP-178 protein-protein interaction can be identified.

In an alternative screening assay, test compounds may be assayed for the their ability to disrupt a DP178/DP107 interaction, as measured immunometrically using an antibody specifically reactive to a DP107/DP178 complex (i.e., an antibody that recognizes neither DP107 nor DP178 individually). Such an assay acts as a competition assay, and is based on techniques well known to those of skill in the art.

The above competition assay may be described, by way of example, and not by way of limitation, by using the DP178 and M41Δ178 peptides and by assaying test compounds for the disruption of the complexes formed by these two peptides by immunometrically visualizing DP178/M41Δ178 complexes via the human recombinant Fab, Fab-d, as described, below, in the Example presented in Section 8. M41Δ178 is a maltose binding fusion protein containing a gp41 region having its DP178 domain deleted, and is described, below, in the Example presented in Section 8.

Utilizing such an assay, M41Δ178 may be immobilized onto solid supports such as microtiter wells. A series of dilutions of a test compound may then be added to each M41Δ178-containing well in the presence of a constant concentration of DP-178 peptide. After incubation, at, for example, room temperature for one hour, unbound DP-178 and test compound are removed from the wells and wells are then incubated with the DP178/M41Δ178-specific Fab-d antibody. After incubation and washing, unbound Fab-d is removed from the plates and bound Fab-d is quantitated. A no-inhibitor control should also be conducted. Test compounds showing an ability to disrupt DP178/M41Δ178 complex formation are identified by their concentration-dependent decrease in the level of Fab-d binding.

A variation of such an assay may be utilized to perform a rapid, high-throughput binding assay which is capable of directly measuring DP178 binding to M41Δ178 for the determination of binding constants of the ligand of inhibitory constants for competitors of DP178 binding.

Such an assay takes advantage of accepted radioligand and receptor binding principles. (See, for example, Yamamura, H. I. et al., 1985, “Neurotransmitter Receptor Binding”, 2nd ed., Raven Press, NY.) As above, M41Δ178 is immobilized onto a solid support such as a microtiter well. DP178 binding to M41Δ178 is then quantitated by measuring the fraction of DP178 that is bound as ¹²⁵I-DP178 and calculating the total amount bound using a value for specific activity (dpm/μg peptide) determined for each labeled DP178 preparation. Specific binding to M41Δ178 is defined as the difference of the binding of the labeled DP178 preparation in the microtiter wells (totals) and the binding in identical wells containing, in addition, excess unlabeled DP178 (nonspecifics).

5.5 PHARMACEUTICAL FORMULATIONS, DOSAGES AND MODES OF ADMINISTRATION

The peptides of the invention may be administered using techniques well known to those in the art. Preferably, agents are formulated and administered systemically. Techniques for formulation and administration may be found in “Remington's Pharmaceutical Sciences”, 18th ed., 1990, Mack Publishing Co., Easton, Pa. Suitable routes may include oral, rectal, transmucosal, or intestinal administration; parenteral delivery, including intramuscular, subcutaneous, intramedullary injections, as well as, intrathecal, direct intraventricular, intravenous, intraperitoneal, intranasal, or intraocular injections, just to name a few. For injection, the agents of the invention may be formulated in aqueous solutions, preferably in physiologically compatible buffers such as Hanks' solution, Ringer's solution, or physiological saline buffer. For such transmucosal administration, penetrants appropriate to the barrier to be permeated are used in the formulation. Such penetrants are generally known in the art.

In instances wherein intracellular administration of the peptides of the invention or other inhibitory agents is preferred, techniques well known to those of ordinary skill in the art may be utilized. For example, such agents may be encapsulated into liposomes, then administered as described above. Liposomes are spherical lipid bilayers with aqueous interiors. All molecules present in an aqueous solution at the time of liposome formation are incorporated into the aqueous interior. The liposomal contents are both protected from the external microenvironment and, because liposomes fuse with cell membranes, are effectively delivered into the cell cytoplasm. Additionally, due to their hydrophobicity, when small molecules are to be administered, direct intracellular administration may be achieved.

Nucleotide sequences encoding the peptides of the invention which are to be intracellularly administered may be expressed in cells of interest, using techniques well known to those of skill in the art. For example, expression vectors derived from viruses such as retroviruses, vaccinia viruses, adeno-associated viruses, herpes viruses, or bovine papilloma viruses, may be used for delivery and expression of such nucleotide sequences into the targeted cell population. Methods for the construction of such vectors and expression constructs are well known. See, for example, Sambrook et al., 1989, Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Press, Cold Spring Harbor N.Y., and Ausubel et al., 1989, Current Protocols in Molecular Biology, Greene Publishing Associates and Wiley Interscience, NY.

With respect to HIV, peptides of the invention, particularly DP107 and DP178, may be used as therapeutics in the treatment of AIDS. In addition, the peptides may be used as prophylactic measures in previously uninfected individuals after acute exposure to an HIV virus. Examples of such prophylactic use of the peptides may include, but are not limited to, prevention of virus transmission from mother to infant and other settings where the likelihood of HIV transmission exists, such as, for example, accidents in health care settings wherein workers are exposed to HIV-containing blood products. The successful use of such treatments do not rely upon the generation of a host immune response directed against such peptides.

Effective dosages of the peptides of the invention to be administered may be determined through procedures well known to those in the art which address such parameters as biological half-life, bioavailability, and toxicity. Given the data presented below in Section 6, DP178, for example, may prove efficacious in vivo at doses required to achieve circulating levels of about 1 to about 10 ng per ml of peptide.

A therapeutically effective dose refers to that amount of the compound sufficient to result in amelioration of symptoms or a prolongation of survival in a patient. Toxicity and therapeutic efficacy of such compounds can be determined by standard pharmaceutical procedures in cell cultures or experimental animals, e.g., for determining the LD₅₀ (the dose lethal to 50% of the population) and the ED50 (the dose therapeutically effective in 50% of the population). The dose ratio between toxic and therapeutic effects is the therapeutic index and it can be expressed as the ratio LD₅₀/ED₅₀. Compounds which exhibit large therapeutic indices are preferred. The data obtained from these cell culture assays and animal studies can be used in formulating a range of dosage for use in humans. The dosage of such compounds lies preferably within a range of circulating concentrations that include the ED50 with little or no toxicity. The dosage may vary within this range depending upon the dosage form employed and the route of administration utilized. For any compound used in the method of the invention, the therapeutically effective dose can be estimated initially from cell culture assays. A dose may be formulated in animal models to achieve a circulating plasma concentration range that includes the IC₅₀ (e.g., the concentration of the test compound which achieves a half-maximal inhibition of the fusogenic event, such as a half-maximal inhibition of viral infection relative to the amount of the event in the absence of the test compound) as determined in cell culture. Such information can be used to more accurately determine useful doses in humans. Levels in plasma may be measured, for example, by high performance liquid chromatography (HPLC).

The peptides of the invention may, further, serve the role of a prophylactic vaccine, wherein the host raises antibodies against the peptides of the invention, which then serve to neutralize HIV viruses by, for example, inhibiting further HIV infection.

Administration of the peptides of the invention as a prophylactic vaccine, therefore, would comprise administering to a host a concentration of peptides effective in raising an immune response which is sufficient to neutralize HIV, by, for example, inhibiting HIV ability to infect cells. The exact concentration will depend upon the specific peptide to be administered, but may be determined by using standard techniques for assaying the development of an immune response which are well known to those of ordinary skill in the art. The peptides to be used as vaccines are usually administered intramuscularly.

The peptides may be formulated with a suitable adjuvant in order to enhance the immunological response. Such adjuvants may include, but are not limited to mineral gels such as aluminum hydroxide; surface active substances such as lysolecithin, pluronic polyols, polyanions; other peptides; oil emulsions; and potentially useful human adjuvants such as BCG and Corynebacterium parvum. Many methods may be used to introduce the vaccine formulations described here. These methods include but are not limited to oral, intradermal, intramuscular, intraperitoneal, intravenous, subcutaneous, and intranasal routes.

Alternatively, an effective concentration of polyclonal or monoclonal antibodies raised against the peptides of the invention may be administered to a host so that no uninfected cells become infected by HIV. The exact concentration of such antibodies will vary according to each specific antibody preparation, but may be determined using standard techniques well known to those of ordinary skill in the art. Administration of the antibodies may be accomplished using a variety of techniques, including, but not limited to those described in this section.

For all such treatments described above, the exact formulation, route of administration and dosage can be chosen by the individual physician in view of the patient's condition. (See e.g. Fingl et al., 1975, in “The Pharmacological Basis of Therapeutics”, Ch. 1 p1).

It should be noted that the attending physician would know how to and when to terminate, interrupt, or adjust administration due to toxicity, or to organ dysfunctions. Conversely, the attending physician would also know to adjust treatment to higher levels if the clinical response were not adequate (precluding toxicity). The magnitude of an administrated dose in the management of the oncogenic disorder of interest will vary with the severity of the condition to be treated and the route of administration. The dose and perhaps dose frequency, will also vary according to the age, body weight, and response of the individual patient. A program comparable to that discussed above may be used in veterinary medicine.

Use of pharmaceutically acceptable carriers to formulate the compounds herein disclosed for the practice of the invention into dosages suitable for systemic administration is within the scope of the invention. With proper choice of carrier and suitable manufacturing practice, the compositions of the present invention, in particular, those formulated as solutions, may be administered parenterally, such as by intravenous injection. The compounds can be formulated readily using pharmaceutically acceptable carriers well known in the art into dosages suitable for oral administration. Such carriers enable the compounds of the invention to be formulated as tablets, pills, capsules, liquids, gels, syrups, slurries, suspensions and the like, for oral ingestion by a patient to be treated.

Pharmaceutical compositions suitable for use in the present invention include compositions wherein the active ingredients are contained in an effective amount to achieve its intended purpose. Determination of the effective amounts is well within the capability of those skilled in the art, especially in light of the detailed disclosure provided herein.

In addition to the active ingredients, these pharmaceutical compositions may contain suitable pharmaceutically acceptable carriers comprising excipients and auxiliaries which facilitate processing of the active compounds into preparations which can be used pharmaceutically. The preparations formulated for oral administration may be in the form of tablets, dragees, capsules, or solutions.

The pharmaceutical compositions of the present invention may be manufactured in a manner that is itself known, e.g., by means of conventional mixing, dissolving, granulating, dragee-making, levigating, emulsifying, encapsulating, entrapping or lyophilizing processes.

Pharmaceutical formulations for parenteral administration include aqueous solutions of the active compounds in water-soluble form. Additionally, suspensions of the active compounds may be prepared as appropriate oily injection suspensions. Suitable lipophilic solvents or vehicles include fatty oils such as sesame oil, or synthetic fatty acid esters, such as ethyl oleate or triglycerides, or liposomes. Aqueous injection suspensions may contain substances which increase the viscosity of the suspension, such as sodium carboxymethyl cellulose, sorbitol, or dextran. Optionally, the suspension may also contain suitable stabilizers or agents which increase the solubility of the compounds to allow for the preparation of highly concentrated solutions.

Pharmaceutical preparations for oral use can be obtained by combining the active compounds with solid excipient, optionally grinding a resulting mixture, and processing the mixture of granules, after adding suitable auxiliaries, if desired, to obtain tablets or dragee cores. Suitable excipients are, in particular, fillers such as sugars, including lactose, sucrose, mannitol, or sorbitol; cellulose preparations such as, for example, maize starch, wheat starch, rice starch, potato starch, gelatin, gum tragacanth, methyl cellulose, hydroxypropylmethyl-cellulose, sodium carboxymethylcellulose, and/or polyvinylpyrrolidone (PVP). If desired, disintegrating agents may be added, such as the cross-linked polyvinyl pyrrolidone, agar, or alginic acid or a salt thereof such as sodium alginate.

Dragee cores are provided with suitable coatings. For this purpose, concentrated sugar solutions may be used, which may optionally contain gum arabic, talc, polyvinyl pyrrolidone, carbopol gel, polyethylene glycol, and/or titanium dioxide, lacquer solutions, and suitable organic solvents or solvent mixtures. Dyestuffs or pigments may be added to the tablets or dragee coatings for identification or to characterize different combinations of active compound doses.

Pharmaceutical preparations which can be used orally include push-fit capsules made of gelatin, as well as soft, sealed capsules made of gelatin and a plasticizer, such as glycerol or sorbitol. The push-fit capsules can contain the active ingredients in admixture with filler such as lactose, binders such as starches, and/or lubricants such as talc or magnesium stearate and, optionally, stabilizers. In soft capsules, the active compounds may be dissolved or suspended in suitable liquids, such as fatty oils, liquid paraffin, or liquid polyethylene glycols. In addition, stabilizers may be added.

6. EXAMPLE DP178 (SEQ ID:1) IS A POTENT INHIBITOR OF HIV-1 INFECTION

In this example, DP178 (SEQ ID:1) is shown to be a potent inhibitor of HIV-1 mediated CD-4⁺ cell-cell fusion and infection by cell free virus. In the fusion assay, this peptide completely blocks virus induced syncytia formation at concentrations of from 1-10 ng/ml. In the infectivity assay the inhibitory concentration is somewhat higher, blocking infection at 90 ng/ml. It is further shown that DP178 (SEQ ID:1) shows that the antiviral activity of DP178 (SEQ ID:1) is highly specific for HIV-1. Additionally, a synthetic peptide, DP-185 (SEQ ID:3), representing a HIV-1-derived DP178 homolog is also found to block HIV-1-mediated syncytia formation.

6.1. MATERIALS AND METHODS

6.1.1. PEPTIDE SYNTHESIS

Peptides were synthesized using Fast Moc chemistry on an Applied Biosystems Model 431A peptide synthesizer. Generally, unless otherwise noted, the peptides contained amidated carboxy termini and acetylated amino termini. Amidated peptides were prepared using Rink resin (Advanced Chemtech) while peptides containing free carboxy termini were synthesized on Wang (p-alkoxy-benzyl-alcohol) resin (Bachem). First residues were double coupled to the appropriate resin and subsequent residues were single coupled. Each coupling step was followed by acetic anhydride capping. Peptides were cleaved from the resin by treatment with trifluoracetic acid (TFA) (10 ml), H₂O (0.5 ml), thioanisole (0.5 ml), ethanedithiol (0.25 ml), and crystalline phenol (0.75 g). Purification was carried out by reverse phase HPLC. Approximately 50 mg samples of crude peptide were chromatographed on a Waters Delta Pak C18 column (19 mm×30 cm, 15 μg spherical) with a linear gradient; H₂O/acetonitrile 0.1% TFA. Lyophilized peptides were stored desiccated and peptide solutions were made in water at about 1 mg/ml. Electrospray mass spectrometry yielded the following results: DP178 (SEQ ID:1):4491.87 (calculated 4491.94); DP-180 (SEQ ID:2):4491.45 (calculated 4491.94); DP-185 (SEQ ID:3):not done (calculated 4546.97).

6.1.2. VIRUS

The HIV-1_(LAI) virus was obtained from R. Gallo (Popovic, M. et al., 1984, Science 224:497-508) and propagated in CEM cells cultured in RPMI 1640 containing 10% fetal calf serum. Supernatant from the infected CEM cells was passed through a 0.2 μm filter and the infectious titer estimated in a microinfectivity assay using the AA5 cell line to support virus replication. For this purpose, 25 μl of serial diluted virus was added to 75 μl AA5 cells at a concentration of 2×10⁵/ml in a 96-well microtitre plate. Each virus dilution was tested in triplicate. Cells were cultured for eight days by addition of fresh medium every other day. On day 8 post infection, supernatant samples were tested for virus replication as evidenced by reverse transcriptase activity released to the supernatant. The TCID₅₀ was calculated according to the Reed and Muench formula (Reed, L. J. et al., 1938, Am. J. Hyg. 27:493-497). The titer of the HIV-1_(LAI) and HIV-1_(MN) stocks used for these studies, as measured on the AA5 cell line, was approximately 1.4×10⁶ and 3.8×10⁴ TCID₅₀/ml, respectively.

6.1.3. CELL FUSION ASSAY

Approximately 7×10⁴ Molt cells were incubated with 1×10⁴ CEM cells chronically infected with the HIV-1_(LAI) virus in 96-well plates (one-half area cluster plates; Costar, Cambridge, Mass.) in a final volume of 100 μl culture medium as previously described (Matthews, T. J. et al., 1987, Proc. Natl. Acad. Sci. USA 84: 5424-5428). Peptide inhibitors were added in a volume of 10 μl and the cell mixtures were incubated for 24 hr. at 37° C. At that time, multinucleated giant cells were estimated by microscopic examination at a 40×magnification which allowed visualization of the entire well in a single field.

6.1.4. CELL FREE VIRUS INFECTION ASSAY

Synthetic peptides were incubated at 37° C. with either 247 TCID₅₀ (for experiment depicted in FIG. 2), or 62 TCID₅₀ (for experiment depicted in FIG. 3) units of HIV-1_(LAI) virus or 25 TCID₅₀ units of HIV-2_(NIHZ) and CEM CD4⁺ cells at peptide concentrations of 0, 0.04, 0.4, 4.0, and 40 μg/ml for 7 days. The resulting reverse transcriptase (RT) activity in counts per minute was determined using the assay described, below, in Section 6.1.5. See, Reed, L. J. et al., 1938, Am. J. Hyg. 27: 493-497 for an explanation of TCID₅₀ calculations.

6.1.5. REVERSE TRANSCRIPTASE ASSAY

The micro-reverse transcriptase (RT) assay was adapted from Goff et al. (Goff, S. et al., 1981, J. Virol. 38:239-248) and Willey et al. (Willey, R. et al., 1988, J. Virol. 62:139-147). Supernatants from virus/cell cultures are adjusted to 1% Triton-X100. A 10 μl sample of supernatant was added to 50 μl of RT cocktail in a 96-well U-bottom microtitre plate and the samples incubated at 37° C. for 90 min. The RT cocktail contained 75 mM KCl, 2 mM dithiothreitol, 5 mM MgCl₂, 5 μg/ml poly A (Pharmacia, cat. No. 27-4110-01), 0.25 units/ml oligo dT (Pharmacia, cat. No. 27-7858-01), 0.05% NP40, 50 mM Tris-HCl, pH 7.8, 0.5 μM non-radioactive dTTP, and 10 μCi/ml ³²P-dTTP (Amersham, cat. No. PB.10167).

After the incubation period, 40 μl of reaction mixture was applied to a Schleicher and Schuell (S+S) NA45 membrane (or DE81 paper) saturated in 2×SSC buffer (0.3M NaCl and 0.003M sodium citrate) held in a S+S Minifold over one sheet of GB003 (S+S) filter paper, with partial vacuum applied. Each well of the minifold was washed four times with 200 μl 2×SSC, under full vacuum. The membrane was removed from the minifold and washed 2 more times in a pyrex dish with an excess of 2×SSC. Finally, the membrane was drained on absorbent paper, placed on Whatman #3 paper, covered with Saran wrap, and exposed to film overnight at −70° C.

6.2. RESULTS

6.2.1. PEPTIDE INHIBITION OF INFECTED CELL-INDUCED SYNCYTIA FORMATION

The initial screen for antiviral activity assayed peptides' ability to block syncytium formation induced by overnight co-cultivation of uninfected Molt4 cells with chronically HIV-1 infected CEM cells. The results of several such experiments are presented herein. In the first of these experiments, serial DP178 (SEQ ID:1) peptide concentrations between 10 μg/ml and 12.5 μg/ml were tested for blockade of the cell fusion process. For these experiments, CEM cells chronically infected with either HIV-1_(LAI), HIV-1_(MN), HIV-1_(RF), or HIV-1_(SF2) virus were cocultivated overnight with uninfected Molt 4 cells. The results (FIG. 4) show that DP178 (SEQ ID:1) afforded complete protection against each of the HIV-1 isolates down to the lowest concentration of DP178 (SEQ ID:1) used. For HIV_(LAI) inhibition, the lowest concentration tested was 12.5 ng/ml; for all other HIV-1 viruses, the lowest concentration of DP178 (SEQ ID:1) used in this study was 100 ng/ml. A second peptide, DP-180 (SEQ ID:2), containing the same amino acid residues as DP178 (SEQ ID:1) but arranged in a random order exhibited no evidence of anti-fusogenic activity even at the high concentration of 40 μg/ml (FIG. 4). These observations indicate that the inhibitory effect of DP178 (SEQ ID:1) is primary sequence-specific and not related to non-specific peptide/protein interactions. The actual endpoint (i.e., the lowest effective inhibitory concentration) of DP178 inhibitory action is within the range of 1-10 ng/ml.

The next series of experiments involved the preparation and testing of a DP178 (SEQ ID:1) homolog for its ability to inhibit HIV-1-induced syncytia formation. As shown in FIG. 1, the sequence of DP-185 (SEQ ID:3) is slightly different from DP178 (SEQ ID:1) in that its primary sequence is taken from the HIV-1_(SF2) isolate and contains several amino acid differences relative to DP178 (SEQ ID:1) near the N terminus. As shown in FIG. 4, DP-185 (SEQ ID:3), exhibits inhibitory activity even at 312.5 ng/ml, the lowest concentration tested.

The next series of experiments involved a comparison of DP178 (SEQ ID:1) HIV-1 and HIV-2 inhibitory activity. As shown in FIG. 5, DP178 (SEQ ID:1) blocked HIV-1-mediated syncytia formation at peptide concentrations below 1 ng/ml. DP178 (SEQ ID:1) failed, however, to block HIV-2 mediated syncytia formation at concentrations as high as 10 g/ml. This striking 4 log selectivity of DP178 (SEQ ID:1) as an inhibitor of HIV-1-mediated cell fusion demonstrates an unexpected HIV-1 specificity in the action of DP178 (SEQ ID:1). DP178 (SEQ ID:1) inhibition of HIV-1-mediated cell fusion, but the peptide's inability to inhibit HIV-2 medicated cell fusion in the same cell type at the concentrations tested provides further evidence for the high degree of selectivity associated with the antiviral action of DP178 (SEQ ID:1).

6.2.2. PEPTIDE INHIBITION OF INFECTION BY CELL-FREE VIRUS

DP178 (SEQ ID:1) was next tested for its ability to block CD-4⁺ CEM cell infection by cell free HIV-1 virus. The results, shown in FIG. 2, are from an experiment in which DP178 (SEQ ID:1) was assayed for its ability to block infection of CEM cells by an HIV-1_(LAI) isolate. Included in the experiment were three control peptides, DP-116 (SEQ ID:9), DP-125 (SEQ ID:8), and DP-118 (SEQ ID:10). DP-116 (SEQ ID:9) represents a peptide previously shown to be inactive using this assay, and DP-125 (SEQ ID:8; Wild, C. et al., 1992, Proc. Natl. Acad, Sci. USA 89:10,537) and DP-118 (SEQ ID:10) are peptides which have previously been shown to be active in this assay. Each concentration (0, 0.04, 0.4, 4, and 40 μg/ml) of peptide was incubated with 247 TCID₅₀ units of HIV-1_(LAI) virus and CEM cells. After 7 days of culture, cell-free supernatant was tested for the presence of RT activity as a measure of successful infection. The results, shown in FIG. 2, demonstrate that DP178 (SEQ ID:1) inhibited the de novo infection process mediated by the HIV-1 viral isolate at concentrations as low as 90 ng/ml (IC50=90 ng/ml). In contrast, the two positive control peptides, DP-125 (SEQ: ID:8) and DP-118 (SEQ ID:10), had over 60-fold higher IC50 concentrations of approximately 5 μg/ml.

In a separate experiment, the HIV-1 and HIV-2 inhibitory action of DP178 (SEQ ID:1) was tested with CEM cells and either HIV-1_(LAI) or HIV-2_(NIHZ). 62 TCID₅₀ HIV-1_(LAI) or 25 GCID₅₀ HIV-2_(NIHZ) were used in these experiments, and were incubated for 7 days. As may be seen in FIG. 3, DP178 (SEQ ID:1) inhibited HIV-1 infection with an IC50 of about 31 ng/ml. In contrast, DP178 (SEQ ID:1) exhibited a much higher IC50 for HIV-2_(NIHZ), thus making DP178 (SEQ ID:1) two logs more potent as a HIV-1 inhibitor than a HIV-2 inhibitor. This finding is consistent with the results of the fusion inhibition assays described, above, in Section 6.2.1, and further supports a significant level of selectivity (i.e., for HIV-1 over HIV-2).

7. EXAMPLE THE HIV-1 INHIBITOR, DP178 (SEO ID:1) IS NON-CYTOTOXIC

In this Example, the 36 amino acid synthetic peptide inhibitor DP178 (SEQ ID:1) is shown to be non-cytotoxic to cells in culture, even at the highest peptide concentrations (40 μg/ml) tested.

7.1. MATERIALS AND METHODS

Cell proliferation and toxicity assay: Approximately 3.8×10⁵ CEM cells for each peptide concentration were incubated for 3 days at 37° C. in T25 flasks. Peptides tested were DP178 (SEQ ID:1) and DP-116 (SEQ ID:9), as described in FIG. 1. Peptides were synthesized as described, above, in Section 6.1. The concentrations of each peptide used were 0, 2.5, 10, and 40 μg/ml. Cell counts were taken at incubation times of 0, 24, 48, and 72 hours.

7.2. RESULTS

Whether the potent HIV-1 inhibitor DP178 (SEQ ID:1) exhibited any cytotoxic effects was assessed by assaying the peptide's effects on the proliferation and viability of cells in culture. CEM cells were incubated in the presence of varying concentrations of DP178 (SEQ ID:1), and DP-116 (SEQ ID:9), a peptide previously shown to be ineffective as a HIV inhibitor (Wild, C. et al., 1992, Proc. Natl. Acad. Sci. USA 89:10,537-10,541). Additionally, cells were incubated in the absence of either peptide.

The results of the cytotoxicity study demonstrate that DP178 (SEQ ID:1) exhibits no cytotoxic effects on cells in culture. As can be seen, below, in Table XXIV, even the proliferation and viability characteristics of cells cultured for 3 days in the presence of the highest concentration of DP178 (SEQ ID:1) tested (40 μg/ml) do not significantly differ from the DP-116 (SEQ ID:9) or the no-peptide controls. The cell proliferation data is also represented in graphic form in FIG. 6. As was demonstrated in the Working Example presented above in Section 6, DP178 (SEQ ID:1) completely inhibits HIV-1 mediated syncytia formation at peptide concentrations between 1 and 10 ng/ml, and completely inhibits cell-free viral infection at concentrations of at least 90 ng/ml. Thus, this study demonstrates that even at peptide concentrations greater than 3 log higher than the HIV inhibitory dose, DP178 (SEQ ID:1) exhibits no cytotoxic effects.

TABLE XXIV % Viability Peptide at time (hours) Peptide Concentration μg/ml 0 24 48 72 DP178 40 98 97 95 97 (SEQ 10 98 97 98 98 ID: 1) 2.5 98 93 96 96 DP116 40 98 95 98 97 (SEQ 10 98 95 93 98 ID: 9) 2.5 98 96 98 99 No 0 98 97 99 98 Peptide

8. EXAMPLE THE INTERACTION OF DP178 AND DP107

Soluble recombinant forms of gp41 used in the example described below provide evidence that the DP178 peptide associates with a distal site on gp41 whose interactive structure is influenced by the DP107 leucine zipper motif. A single mutation disrupting the coiled-coil structure of the leucine zipper domain transformed the soluble recombinant gp41 protein from an inactive to an active inhibitor of HIV-1 fusion. This transformation may result from liberation of the potent DP178 domain from a molecular clasp with the leucine zipper, DP107, determinant. The results also indicate that the anti-HIV activity of various gp41 derivatives (peptides and recombinant proteins) may be due to their ability to form complexes with viral gp41 and interfere with its fusogenic process.

8.1. MATERIALS AND METHODS

8.1.1. CONSTRUCTION OF FUSION PROTEINS AND GP41 MUTANTS

Construction of fusion proteins and mutants shown in FIG. 7 was accomplished as follows: the DNA sequence corresponding to the extracellular domain of gp41 (540-686) was cloned into the Xmn I site of the expression vector pMal-p2 (New England Biolab) to give M41. The gp41 sequence was amplified from pgtat (Malim et al., 1988, Nature 355: 181-183) by using polymerase chain reaction (PCR) with upstream primer 5′-ATGACGCTGACGGTACAGGCC-3′ (SEQ ID NO:11) (primer A) and downstream primer 5′-TGACTAAGCTTAATACCACAGCCAATTTGTTAT-3′ (SEQ ID NO:12) (primer B). M41-P was constructed by using the T7-Gen in vitro mutagenesis kit from United States Biochemicals (USB) following the supplier's instructions. The mutagenic Primer (5′-GGAGCTGCTTGGGGCCCCAGAC-3′) (SEQ ID NO:13) introduces an Ile to Pro mutation in M41 at position 578. M41Δ107, from which the DP-107 region has been deleted, was made using a deletion mutagenic primer 5′-CCAAATCCCCAGGAGCTGCTCGAGCTGCACTATACCAGAC-3′ (SEQ ID NO:14) (primer C) following the USB T7-Gen mutagenesis protocol. M41Δ178, from which the DP-178 region has been deleted, was made by cloning the DNA fragment corresponding to gp41 amino acids 540-642 into the Xmn I site of pMal-p2. Primer A and 5′-ATAGCTTCTAGATTAATTGTTAATTTCTCTGTCCC-3′ (SEQ ID NO:15) (primier D) were used in the PCR with the template pgtat to generate the inserted DNA fragments. M41-P was used as the template with primer A and D in PCR to generate M41-PΔ178. All inserted sequences and mutated residues were checked by restriction enzyme analysis and confirmed by DNA sequencing.

8.1.2. PURIFICATION AND CHARACTERIZATION OF FUSION PROTEINS

The fusion proteins were purified according to the protocol described in the manufacturer's brochure of protein fusion and purification systems from New England Biolabs (NEB). Fusion proteins (10 ng) were analyzed by electrophoresis on 8% SDS polyacrylamide gels. Western blotting analysis was performed as described by Sambrook et al., 1989, Molecular Cloning: A Laboratory Manual, 2d Ed, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., Ch. 18, pp. 64-75. An HIV-1 positive serum diluted 1000-fold, or a human Fab derived from repertoire cloning was used to react with the fusion proteins. The second antibody was HRP-conjugated goat antihuman Fab. An ECL Western blotting detection system (Amersham) was used to detect the bound antibody. A detailed protocol for this detection system was provided by the manufacturer. Rainbow molecular weight markers (Amersham) were used to estimate the size of fusion proteins.

8.1.3. CELL FUSION ASSAYS FOR ANTI-HIV ACTIVITY

Cell fusion assays were performed as previously described (Matthews et al., 1987, Proc. Natl. Acad. Sci. USA 84: 5424-5481). CEM cells (7×10⁴) were incubated with HIV-1_(IIIB) chronically infected CEM cells (10⁴) in 96-well flat-bottomed half-area plates (Costar) in 100 μl culture medium. Peptide and fusion proteins at various concentrations in 10 μl culture medium were incubated with the cell mixtures at 37° C. for 24 hours. Multinucleated syncytia were estimated with microscopic examination. Both M41 and M41-P did not show cytotoxicity at the concentrations tested and shown in FIG. 8.

Inhibition of HIV-1 induced cell-cell fusion activity was carried out in the presence of 10 nM DP178 and various concentrations of M41Δ178 or M41-PΔ178 as indicated in FIG. 9. There was no observable syncytia in the presence of 10 nM DP178. No peptide or fusion protein was added in the control samples.

8.1.4. ELISA ANALYSIS OF DP178 BINDING TO THE LEUCINE ZIPPER MOTIF OF GP41

The amino acid sequence of DP178 used is: YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF. For enzyme linked immunoassay (ELISA), M41Δ178 or M41-PΔ178 (5 μg/ml) in 0.1M NaHCO₃, pH 8.6, were coated on 96 wells Linbro ELISA plates (Flow Lab, Inc.) overnight. Each well was washed three times with distilled water then blocked with 3% bovine serum albumin (BSA) for 2 hours. After blocking, peptides with 0.5% BSA in TBST (40 mM Tris-HCl pH7.5, 150 mM NaCl, 0.05% Tween 20) were added to the ELISA plates and incubated at room temperature for 1 hour. After washing three times with TBST, Fab-d was added at a concentration of 10 ng/ml with 0.5% BSA in TBST. The plates were washed three times with TBST after incubation at room temperature for 1 hour. Horse radish peroxidase (HRP) conjugated goat antihuman Fab antiserum at a 2000 fold dilution in TBST with 0.5% BSA was added to each well and incubated at room temperature for 45 minutes. The plates were then washed four times with TBST. The peroxidase substrate o-phenylene diamine (2.5 mg/ml) and 0.15% H₂O₂ were added to develop the color. The reaction was stopped with an equal volume of 4.5 N H₂SO₄ after incubation at room temperature for 10 minutes. The optical density of the stopped reaction mixture was measured with a micro plate reader (Molecular Design) at 490 nm. Results are shown in FIG. 10.

8.2. RESULTS

8.2.1. THE EXPRESSION AND CHARACTERIZATION OF THE ECTODOMAIN OF gp41

As a step toward understanding the roles of the two helical regions in gp41 structure and function, the ectodomain of gp41 was expressed as a maltose binding fusion protein (M41) (FIG. 7). The fusogenic peptide sequence at the N-terminal of gp41 was omitted from this recombinant protein and its derivatives to improve solubility. The maltose binding protein facilitated purification of the fusion proteins under relatively mild, non-denaturing conditions. Because the M41 soluble recombinant gp41 was not glycosylated, lacked several regions of the transmembrane protein (i.e., the fusion peptide, the membrane spanning, and the cytoplasmic domains), and was expressed in the absence of gp120, it was not expected to precisely reflect the structure of native gp41 on HIV-1 virions. Nevertheless, purified M41 folded in a manner that preserved certain discontinuous epitopes as evidenced by reactivity with human monoclonal antibodies, 98-6, 126-6, and 50-69, previously shown to bind conformational epitopes on native gp4 expressed in eukaryotic cells (Xu et al., 1991, J. Virol. 65: 4832-4838; Chen, 1994, J. Virol. 68:2002-2010). Thus, at least certain regions of native gp41 defined by these antibodies appear to be reproduced in the recombinant fusion protein M41. Furthermore, M41 reacted with a human recombinant Fab (Fab-d) that recognizes a conformational epitope on gp41 and binds HIV-1 virions as well as HIV-1 infected cells but not uninfected cells as analyzed by FACS. Deletion of either helix motif, i.e., DP107 or DP178, of the M41 fusion protein eliminated reactivity with Fab-d. These results indicate that both helical regions, separated by 60 amino acids in the primary sequence, are required to maintain the Fab-d epitope.

8.2.2. ANTI-HIV ACTIVITY OF THE RECOMBINANT ECTODOMAIN OF GP41

The wild type M41 fusion protein was tested for anti-HIV-1 activity. As explained, supra, synthetic peptides corresponding to the leucine zipper (DP107) and the C-terminal putative helix (DP178) show potent anti-HIV activity. Despite inclusion of both these regions, the recombinant M41 protein did not affect HIV-1 induced membrane fusion at concentrations as high as 50 μM (Table XXV, below).

TABLE XXV DISRUPTION OF THE LEUCINE ZIPPER OF GP41 FREES THE ANTI-HIV MOTIF DP107 DP178 M41 M41-P M41-PΔ178 Cell fusion 1 μM  1 nM >50 μM 83 nM >50 μM (IC₉₀) Fab-D — — 3.5 × 10⁻⁹ 2.5 × 10⁻⁸ — binding (k_(D)) HIV infectiv- 1 μM 80 nM >16 μM 66 nM  >8 μM ity (IC₉₀) ¹The affinity constants of Fab-d binding to the fusion proteins were determined using a protocol described by B. Friguet et al., 1985, J. Immunol. Method. 77: 305-319. — = No detectable binding of Fab-d to the fusion proteins. Antiviral Infectivity Assays. 20 μl of serially diluted virus stock was incubated for 60 minutes at ambient temperature with 20 μl of the indicated concentration of purified recombinant fusion protein in RPMI 1640 containing 10% fetal bovine serum and antibiotics in a 96-well microtiter plate. 20 μl of CEM4 cells at 6 × 10⁵ cells/ml were added to each well, and cultures were incubated at 37° C. in a humidified CO₂ incubator. # Cells were cultured for 9 days by the addition of fresh medium every 2 to 3 days. On days 5, 7, and 9 postinfection, supernatant samples were assayed for reverse transcriptase (RT) activity, as described below, to monitor viral replication. The 50% tissue culture infectious dose (TCID₅₀) was calculated for each condition according to the formula of Reed & Muench, 1937, Am. J. Hyg. 27: 493-497. RT # activity was determined by a modification of the published methods of Goff et al., 1981, J. Virol. 38: 239-248 and Willey et al., 1988, J. Virol. 62: 139-147 as described in Chen et al., 1993, AIDS Res. Human Retroviruses 9: 1079-1086.

Surprisingly, a single amino acid substitution, proline in place of isoleucine in the middle of the leucine zipper motif, yielded a fusion protein (M41-P) which did exhibit antiviral activity (Table XXV and FIG. 8). As seen in Table XXV, M41-P blocked syncytia formation by 90% at approximately 85 nM and neutralized HIV-1_(IIIB) infection by 90% at approximately 70 nM concentrations. The anti-HIV-1 activity of M41-P appeared to be mediated by the C-terminal helical sequence since deletion of that region from M41-P yielded an inactive fusion protein, M41-PΔ178 (Table XXV). This interpretation was reinforced by experiments demonstrating that a truncated fusion protein lacking the DP178 sequence, M41Δ178, abrogated the potent anti-fusion activity of the DP178 peptide in a concentration-dependent manner (FIG. 9). The same truncated fusion protein containing the proline mutation disrupting the leucine zipper, M41-PΔ178, was not active in similar competition experiments (FIG. 9). The results indicate that the DP178 peptide associates with a second site on gp41 whose interactive structure is dependent on a wild type leucine zipper sequence. A similar interaction may occur within the wild type fusion protein, M41, and act to form an intramolecular clasp which sequesters the DP178 region, making it unavailable for anti-viral activity.

A specific association between these two domains is also indicated by other human monoclonal Fab-d studies. For example, Fab-d failed to bind either the DP178 peptide or the fusion protein M41 Δ178, but its epitope was reconstituted by simply mixing these two reagents together (FIG. 10). Again, the proline mutation in the leucine zipper domain of the fusion protein, M41-PΔ178, failed to reconstitute the epitope in similar mixing experiments.

9. EXAMPLE METHOD FOR COMPUTER-ASSISTED IDENTIFICATION OF DP107-LIKE AND DP178-LIKE SEOUENCES

A number of known coiled-coil sequences have been well described in the literature and contain heptad repeat positioning for each amino acid. Coiled-coil nomenclature labels each of seven amino acids of a heptad repeat A through G, with amino acids A and D tending to be hydrophobic positions. Amino acids E and G tend to be charged. These four positions (A, D, E, and G) form the amphipathic backbone structure of a monomeric alpha-helix. The backbones of two or more amphipathic helices interact with each other to form di-, tri-, tetrameric, etc., coiled-coil structures. In order to begin to design computer search motifs, a series of well characterized coiled coils were chosen including yeast transcription factor GCN4, Influenza Virus hemagglutinin loop 36, and human proto-oncogenes c-Myc, c-Fos, and c-Jun. For each peptide sequence, a strict homology for the A and D positions, and a list of the amino acids which could be excluded for the B, C, E, F, and G positions (because they are not observed in these positions) was determined. Motifs were tailored to the DP107 and DP178 sequences by deducing the most likely possibilities for heptad positioning of the amino acids of HIV-1 Bru DP-107, which is known to have coiled-coil structure, and HIV-1 Bru DP178, which is still structurally undefined. The analysis of each of the sequences is contained in FIG. 12. For example, the motif for GCN4 was designed as follows:

1. The only amino acids (using standard single letter amino acid codes) found in the A or D positions of GCN4 were [LMNV].

2. All amino acids were found at B, C, E, F, and G positions except {CFGIMPTW}.

3. The PESEARCH motif would, therefore, be written as follows:

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)

Translating or reading the motif: “at the first A position either L, M, N, or V must occur; at positions B and C (the next two positions) accept everything except C, F, G, I, M, P, T, or W; at the D position either L, M, N, or V must occur; at positions E, F, and G (the next 3 positions) accept everything except C, F, G, I, M, P, T, or W.” This statement is contained four times in a 28-mer motif and five times in a 35-mer motif. The basic motif key then would be: [LMNV]-{CFGIMPTW}. The motif keys for the remaining well described coiled-coil sequences are summarized in FIG. 12.

The motif design for DP107 and DP178 was slightly different than the 28-mer model sequences described above due to the fact that heptad repeat positions are not defined and the peptides are both longer than 28 residues. FIG. 13 illustrates several possible sequence alignments for both DP107 and DP178 and also includes motif designs based on 28-mer, 35-mer, and full-length peptides. Notice that only slight differences occur in the motifs as the peptides are lengthened. Generally, lengthening the base peptide results in a less stringent motif. This is very useful in broadening the possibilities for identifying DP107-or DP-178-like primary amino acid sequences referred to in this document as “hits”.

In addition to making highly specific motifs for each type peptide sequence to be searched, it is also possible to make “hybrid” motifs. These motifs are made by “crossing” two or more very stringent motifs to make a new search algorithm which will find not only both “parent” motif sequences but also any peptide sequences which have similarities to one, the other, or both “parents”. For example, in FIG. 14 the “parent” sequence of GCN4 is crossed with each of the possible “parent” motifs of DP-107. Now the hybrid motif must contain all of the amino acids found in the A and D positions of both parents, and exclude all of the amino acids not found in either parent at the other positions. The resulting hybrid from crossing GCN4 or [LMNV]{CFGIMPTW} and DP107 (28-mer with the first L in the D position) or [ILQT]{CDFIMPST}, is [ILMNQTV]{CFIMPT}. Notice that now only two basic hybrid motifs exist which cover both framing possibilities, as well as all peptide lengths of the parent DP-107 molecule. FIG. 15 represents the “hybridizations” of GCN4 with DP-178. FIG. 16 represents the “hybridizations” of DP107 and DP178. It is important to keep in mind that the represented motifs, both parent and hybrid, are motif keys and not the depiction of the full-length motif needed to actually do the computer search.

Hybridizations can be performed on any combination of two or more motifs. FIG. 17 summarizes several three-motif hybridizations including GCN4, DP107 (both frames), and DP178 (also both frames). Notice that the resulting motifs are now becoming much more similar to each other. In fact, the first and third hybrid motifs are actually subsets of the second and fourth hybrid motifs respectively. This means that the first and third hybrid motifs are slightly more stringent than the second and fourth. It should also be noted that with only minor changes in these four motifs, or by hybridizing them, a single motif could be obtained which would find all of the sequences. However, it should be remembered that stringency is also reduced. Finally, the most broad-spectrum and least-stringent hybrid motif is described in FIG. 18 which summarizes the hybridization of GCN4, DP107 (both frames), DP178 (both frames), c-Fos, c-Jun, c-Myc, and Flu loop 36.

A special set of motifs was designed based on the fact that DP-178 is located only approximately ten amino acids upstream of the transmembrane spanning region of gp41 and just C-terminal to a proline which separates DP107 and DP178. It has been postulated that DP178 may be an amphipathic helix when membrane associated, and that the proline might aid in the initiation of the helix formation. The same arrangement was observed in Respiratory Syncytial Virus; however, the DP178-like region in this virus also had a leucine zipper just C-terminal to the proline. Therefore, N-terminal proline-leucine zipper motifs were designed to analyze whether any other viruses might contain this same pattern. The motifs are summarized in FIG. 19.

The PC/Gene protein database contains 5879 viral amino acid sequences (library file PVIRUSES; CD-ROM release 11.0). Of these, 1092 are viral enveloped or glycoprotein sequences (library file PVIRUSE1). Tables V through XIV contain lists of protein sequence names and motif hit locations for all the motifs searched.

10. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP107 AND DP178-LIKE SEQUENCES IN HUMAN IMMUNODEFICIENCY VIRUS

FIG. 20 represents search results for HIV-1 BRU isolate gp41 (PC/Gene protein sequence PENV_HV1BR). Notice that the hybrid motif which crosses DP-107 and DP-178 (named 107×178×4; the same motif as found in FIG. 16 found three hits including amino acids 550-599, 636-688, and 796-823. These areas include DP-107 plus eight N-terminal and four C-terminal amino acids; DP178 plus seven N-terminal and ten C-terminal amino acids; and an area inside the transmembrane region (cytoplasmic). FIG. 20 also contains the results obtained from searching with the motif named ALLMOTI5, for which the key is found in FIG. 17 ({CDGHP} {CFP}x5). This motif also found three hits including DP107 (amino acids 510-599), DP178 (615-717), and a cytoplasmic region (772-841). These hits overlap the hits found by the motif 107×178×4 with considerable additional sequences on both the amino and carboxy termini. This is not surprising in that 107×178×4 is a subset of the ALLMOTI5 hybrid motif. Importantly, even though the stringency of ALLMOTI5 is considerably less than 107×178×4, it still selectively identifies the DP107 and DP178 regions of gp41 shown to contain sequences for inhibitory peptides of HIV-1. The results of these two motif searches are summarized in Table V under the PC/Gene protein sequence name PENV HV1BR. The proline-leucine zipper motifs also gave several hits in HIV-1 BRU including 503-525 which is at the very C-terminus of gp120, just upstream of the cleavage site (P7LZIPC and P12LZIPC); and 735-768 in the cytoplasmic domain of gp41 (P23LZIPC). These results are found in Tables VIII, IX, and X under the same sequence name as mentioned above. Notice that the only area of HIV-1 BRU which is predicted by the Lupas algorithm to contain a coiled-coil region, is from amino acids 635-670. This begins eight amino acids N-terminal to the start and ends eight amino acids N-terminal to the end of DP178. DP107, despite the fact that it is a known coiled coil, is not predicted to contain a coiled-coil region using the Lupas method.

11. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP107-LIKE AND DP178-LIKE SEQUENCES IN HUMAN RESPIRATORY SYNCYTIAL VIRUS

FIG. 21 represents search results for Human Respiratory Syncytial Virus (RSV; Strain A2) fusion glycoprotein F1 (PC/Gene protein sequence name PVGLF_HRSVA). Motif 107×178×4 finds three hits including amino acids 152-202, 213-243, and 488-515. The arrangement of these hits is similar to what is found in HIV-1 except that the motif finds two regions with similarities to DP-178, one just downstream of what would be called the DP107 region or amino acids 213-243, and one just upstream of the transmembrane region (also similar to DP178) or amino acids 488-515. Motif ALLMOTI5 also finds three areas including amino acids 116-202, 267-302, and 506-549. The proline-leucine zipper motifs also gave several hits including amino acids 205-221 and 265-287 (P1LZIPC 265-280, P12LZIPC), and 484-513 (P7LZIPC and P12LZIPC 484-506, P23LZIPC). Notice that the PLZIP motifs also identify regions which share location similarities with DP-178 of HIV-1.

12. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP107-LIKE AND DP178-LIKE SEQUENCES IN SIMIAN IMMUNODEFICIENCY VIRUS

Motif hits for Simian immunodeficiency Virus gp41 (AGM3 isolate; PC/Gene protein sequence name PENV_SIVAG) are shown in FIG. 22. Motif 107×178×4 finds three hits including amino acids 566-593, 597-624, and 703-730. The first two hits only have three amino acids between them and could probably be combined into one hit from 566-624 which would represent a DP107-like hit. Amino acids 703 to 730 would then represent a DP178-like hit. ALLMOTI5 also finds three hits including amino acids 556-628 (DP107-like), 651-699 (DP178-like), and 808-852 which represents the transmembrane spanning region. SIV also has one region from 655-692 with a high propensity to form a coiled coil as predicted by the Lupas algorithm. Both 107×178×4 and ALLMOTI5 motifs find the same region. SIV does not have any PLZIP motif hits in gp41.

The identification of DP178/DP107 analogs for a second SIV isolate (MM251) is demonstrated in the Example presented, below, in Section 19.

13. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP107-LIKE AND DP178 LIKE SEQUENCES IN CANINE DISTEMPER VIRUS

Canine Distemper Virus (strain Onderstepoort) fusion glycoprotein F1 (PC/Gene Protein sequence name PVGLF_CDVO) has regions similar to Human RSV which are predicted to be DP107-like and DP178-like (FIG. 23). Motif 107×178×4 highlights one area just C-terminal to the fusion peptide at amino acids 252-293. Amino acids 252-286 are also predicted to be coiled coil using the Lupas algorithm. Almost 100 amino acids C-terminal to the first region is a DP178-like area at residues 340-367. ALLMOTI5 highlights three areas of interest including: amino acids 228-297, which completely overlaps both the Lupas prediction and the DP107-like 107×178×4 hit; residues 340-381, which overlaps the second 107×178×4 hit; and amino acids 568-602, which is DP178-like in that it is located just N-terminal to the transmembrane region. It also overlaps another region (residues 570-602) predicted by the Lupas method to have a high propensity to form a coiled coil. Several PLZIP motifs successfully identified areas of interest including P6 and P12LZIPC which highlight residues 336-357 and 336-361 respectively; P1 and P12LZIPC which find residues 398-414; and P12 and P23LZIPC which find residues 562-589 and 562-592 respectively.

14. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP107-LIKE AND DP178-LIKE SEQUENCES IN NEWCASTLE DISEASE VIRUS

FIG. 24 shows the motif hits found in Newcastle Disease Virus (strain Australia-Victoria/32; PC Gene protein sequence name PVGLF_NDVA). Motif 107×178×4 finds two areas including a DP107-like hit at amino acids 151-178 and a DP178-like hit at residues 426-512. ALLMOTI5 finds three areas including residues 117-182, 231-272, and 426-512. The hits from 426-512 include a region which is predicted by the Lupas method to have a high coiled-coil propensity (460-503). The PLZIP motifs identify only one region of interest at amino acids 273-289 (P1 and 12LZIPC).

15. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP107-LIKE AND DP178-LIKE SEOUENCES IN HUMAN PARAINFLUENZA VIRUS

Both motifs 107×178×4 and ALLMOTI5 exhibit DP107-like hits in the same region, 115-182 and 117-182 respectively, of Human Parainfluenza Virus (strain NIH 47885; PC/Gene protein sequence name PVGLF_(—p)13H4; (FIG. 25). In addition, the two motifs have a DP178-like hit just slightly C-terminal at amino acids 207-241. Both motifs also have DP178-like hits nearer the transmembrane region including amino acids 457-497 and 462-512 respectively. Several PLZIP motif hits are also observed including 283-303 (P5LZIPC), 283-310 (P12LZIPC), 453-474 (P6LZIPC), and 453-481 (P23LZIPC). The Lupas algorithm predicts that amino acids 122-176 may have a propensity to form a coiled-coil.

16. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP107-LIKE AND DP178-LIKE SEQUENCES OF INFLUENZA A VIRUS

FIG. 26 illustrates the Lupas prediction for a coiled coil in Influenza A Virus (strain A/Aichi/2/68) at residues 379-436, as well as the motif hits for 107×178×4 at amino acids 387-453, and for ALLMOTI5 at residues 380-456. Residues 383-471 (38-125 of HA2) were shown by Carr and Kim to be an extended coiled coil when under acidic pH (Carr and Kim, 1993, Cell 73: 823-832). The Lupas algorithm predicts a coiled-coil at residues 379-436. All three methods successfully predicted the region shown to actually have coiled-coil structure; however, ALLMOTI5 predicted the greatest portion of the 88 residue stretch.

17. EXAMPLE POTENTIAL RESPIRATORY SYNCYTIAL VIRUS DP178/DP107 ANALOGS: CD AND ANTIVIRAL CHARACTERIZATION

In the Example presented herein, respiratory syncytial virus (RSV) peptides identified by utilizing the computer-assisted search motifs described in the Examples presented in Sections 9 and 11, above, were tested for anti-RSV activity. Additionally, circular dichroism (CD) structural analyses were conducted on the peptides, as discussed below. It is demonstrated that several of the identified peptides exhibit potent antiviral capability. Additionally, it is shown that several of these peptides exhibit a substantial helical character.

17.1 MATERIALS AND METHODS

Structural analyses: The CD spectra were measured in a 10 mM sodium phosphate, 150 mM sodium chloride, pH 7.0, buffer at approximately 10 mM concentrations, using a 1 cm pathlength cell on a Jobin/Yvon Autodichrograph Mark V CD spectrophotometer. Peptides were synthesized according to the methods described, above, in Section 6.1. Peptide concentrations were determined from A₂₈₀ using Edlehoch's method (1967, Biochemistry 6:1948).

Anti-RSV antiviral activity assays: The assay utilized herein tested the ability of the peptides to disrupt the ability of HEp2 cells acutely infected with RSV (i.e., cells which are infected with a multiplicity of infection of greater than 2) to fuse and cause syncytial formation on a monolayer of uninfected an uninfected line of Hep-2 cells. The lower the observed level of fusion, the greater the antiviral activity of the peptide was determined to be.

Uninfected confluent monolayers of Hep-2 cells were grown in microtiter wells in 3% EMEM (Eagle Minimum Essential Medium w/o L-glutamine [Bio Whittaker Cat. No. 12-125F], with fetal bovine serum [FBS; which had been heat inactivated for 30 minutes at 56° C.; Bio Whittaker Cat. No. 14-501F) supplemented at 3%, antibiotics (penicillin/streptomycin; Bio Whittaker Cat. No. 17-602E) added at 1%, and glutamine added at 1%.

To prepare Hep2 cells for addition to uninfected celis, cultures of acutely infected Hep2 cells were washed with DPBS (Dulbecco's Phosphate Buffered Saline w/o calcium or magnesium; Bio Whittaker Cat. No. 17-512F) and cell monolayers were removed with Versene (1:5000; Gibco Life Technologies Cat. No. 15040-017). The cells were spun 10 minutes and resuspended in 3% FBS. Cell counts were performed using a hemacytometer. Persistent cells were added to the uninfiected Hep-2 cells.

The antiviral assay was conducted by, first, removing all media from the wells containing uninfected Hep-2 cells, then adding peptides (at the dilutions described below) in 3% EMEM, and 100 acutely RSV-infected Hep2 cells per well. Wells were then incubated at 37° C. for 48 hours.

After incubation, cells in control wells were checked for fusion centers, media was removed from the wells, followed by addition, to each well, of either Crystal Violet stain or XTT. With respect to Crystal Violet, approximately 50μl 0.25% Crystal Violet stain in methanol were added to each well. The wells were rinsed immediately, to remove excess stain, and were allowed to dry. The number of syncytia per well were then counted, using a dissecting microscope.

With respect to XTT (2,3-bis[2-Methoxy-4-nitro-5-sulfophenyl]-2H-tetrazolium-5-carboxyanilide inner salt), 50 μl XTT (1 mg/ml in RPMI buffered with 100 mM HEPES, pH 7.2-7.4, plus 5% DMSO) were added to each well. The OD_(450/690) was measured (after blanking against growth medium without cells or reagents, and against reagents) according to standard procedures.

Peptides: The peptides characterized in the study presented herein were:

1) peptides T-142 to T-155 and T-575, as shown in FIGS. 27A-B, and peptides T-22 to T-27, T-68, T-334 and T-371 to T-375, as shown in FIG. 27C;

2) peptides T-120 to T-141 and T-576, as shown in FIGS. 27D-E, and peptides T-12, T-13, T-15, T-19, T-28 to T-30, T-66, T-69, T-70 and T-576, as shown in FIG. 27F; and

3) peptides T-67 and T-104 to T-119, as shown in FIGS. 28A-B, and peptides T-71, T-384, T-613 to T-617, T-662 to T-676 and T-730, as shown in FIG. 28C.

The peptides of group 1 represent portions of the RSV F2 protein DP178/107-like region. The peptides of group 2 represent portions of the RSV F1 protein DP107-like region. The peptides of groups 3 represent portions of the RSV F1 protein DP178-like region.

Each peptide was tested at 2-fold serial dilutions ranging from 100 μg/ml to approximately 100 μg/ml. For each of the assays, a well containing no peptide was also used. The IC₅₀ data for each peptide represents the average of several experiments conducted utilizing that peptide.

17.2 RESULTS

The data summarized in FIGS. 27A-C and 28A-C represent antiviral and structural information obtained from peptides derived from the RSV F2 DP178/DP107-like F2 region (FIGS. 27A-C), the RSV F1 DP-107-like region (FIGS. 27D-F) and the RSV DP178-like F1 region (FIGS. 28A-C).

As shown in FIGS. 27A-F, a number of the RSV DP178/DP107-like peptides exhibited a detectable level of antiviral activity. Peptides from the RSV DP178/DP107-like F2 region (FIGS. 27A-C), for example, T-142 to T-145 and T-334 purfied peptides, exhibited detectable levels of antiviral activity, as evidenced by their IC₅₀ values. Further, a number of RSV F1 DP107-like peptides (FIGS. 27D-F) exhibited a sizable level of antiviral activity as purified peptides, including, for example, peptides T-124 to T-127, T-131, T-135 and T-137 to T-139, as demonstrated by their low IC₅₀ values. In addition, CD analysis (FIGS. 27B, 27E) reveals that many of the peptides exhibit some detectable level of helical structure.

The results summarized in FIGS. 28A-C demonstrate that a number of DP178-like purified peptides exhibit a range of potent anti-viral activity. These peptides include, for example, T-67, T-104, T-105 and T-107 to T-119, as listed in FIGS. 28A-B, and T-665 to T-669 and T-671 to T-673, as listed in FIG. 28C. In addition, some of the DP178-like peptides exhibited some level of helicity.

Thus, the computer assisted searches described, hereinabove, successfully identified viral peptide domains that represent highly promising anti-RSV antiviral compounds.

18. EXAMPLE POTENTIAL HUMAN PARAINFLUENZA VIRUS TYPE 3 DP178/DP107 ANALOGS: CD AND ANTIVIRAL CHARACTERIZATION

In the Example presented herein, human paralinfluenza virus type 3 (HPIV3) peptides identified by utilizing the computer-assisted search motifs desribed in the Examples presented in Sections 9 and 15, above, were tested for anti-HPIV3 activity. Additionally, circular dichroism (CD) structural analyses were conducted on the peptides, as discussed below. It is demonstrated that several of the identified peptides exhibit potent antiviral capability. Additionally, it is shown that several of these peptides exhibit a substantial helical character.

18.1 MATERIALS AND METHODS

Structural analyses: Structural analyses consisted of circular dichroism (CD) studies. The CD spectra were measured in a 10 mM sodium phosphate, 150 mM sodium chloride, pH 7.0, buffer at approximately 10 mM concentrations, using a 1 cm pathlength cell on a Jobin/Yvon Autodichrograph Mark V CD spectrophotometer. Peptide concentrations were determined from A₂₈₀ using Edlehoch's method (1967, Biochemistry 6:1948).

Anti-HPIV3 antiviral activity assays: The assay utilized herein tested the ability of the peptides to disrupt the ability of Hep2 cells chronically infected with HPIV3 to fuse and cause syncytial formation on a monolayer of an uninfected line of CV-1W cells. The more potent the lower the observed level of fusion, the greater the antiviral activity of the peptide.

Uninfected confluent monolayers of CV-1W cells were grown in microtiter wells in 3% EMEM (Eagle Minimum Essential Medium w/o L-glutamine [Bio Whittaker Cat. No. 12-125F], with fetal bovine serum [FBS,; which had been heat inactivated for 30 minutes at 56° C.; Bio Whittaker Cat. No. 14-501F) supplemented at 3%, antibiotics/antimycotics (Gibco BRL Life Technologies Cat. No. 15040-017) added at 1%, and glutamine added at 1%.

To prepare Hep2 cells for addition to uninfected cells, cultures of chronically infected Hep2 cells were washed with DPBS (Dulbecco's Phosphate Buffered Saline w/o calcium or magnesium; Bio Whittaker Cat. No. 17-512F) and cell monolayers were removed with Versene (1:5000; Gibco Life Technologies Cat. No. 15040-017). The cells were spun 10 minutes and resuspended in 3% FBS. Cell counts were performed using a hemacytometer. Persistent cells were added to the uninfected CV-1W cells.

The antiviral assay was conducted by, first, removing all media from the wells containing uninfected CV-1W cells, then adding peptides (at the dilutions described below) in 3% EMEM, and 500 chronically HPIV3-infected Hep2 cells per well. Wells were then incubated at 37° C. for 24 hours.

On day 2, after cells in control wells were checked for fusion centers, media was removed from the wells, followed by addition, to each well, of approximately 50 μl 0.25% Crystal Violet stain in methanol. Wells were rinsed immediately, to remove excess stain and were then allowed to dry. The number of syncytia per well were then counted, using a dissecting microscope.

Alternatively, instead of Crystal Violet analysis, cells were assayed with XTT, as described, above, in Section 17.1.

Peptides: The peptides characterized in the study presented herein were:

1) Peptides 157 to 188, as shown in FIGS. 29A-C, and peptides T-38 to T-40, T-42 to T-46 and T-582, as shown in FIGS. 29D-E. These peptides are derived from the DP107 region of the HPIV3 F1 fusion protein (represented by HPF3 107, as shown in FIGS. 29A-B); and

2) Peptides 189 to 210, as shown in FIGS. 30A-B, and T-269, T-626, T-383 and T-577 to T-579, as shown in FIG. 30C. These peptides are primarily derived from the DP178 region of the HPIV3 F1 fusion protein (represented by HPF3 178, as shown in FIG. 30A). Peptide T-626 contains two mutated amino acid residues. Additionally, peptide T-577 represents F1 amino acids 65-100, T-578 represents F1 amino acids 207-242 and T-579 represents F1 amino acids 273-309.

Each peptide was tested at 2-fold serial dilutions ranging from 500 μg/ml to approximately 500 ng/ml. For each of the assays, a well containing no peptide was also used.

18.2 RESULTS

The data summarized in FIGS. 29A-E and 30A-C represent antiviral and structural information obtained from peptides derived from the HPIV3 fusion protein DP107-like region (FIGS. 29A-E) and the HPIV3 fusion protein DP178-like region (FIGS. 30A-C).

As shown in FIGS. 29A-E, a number of the HPIV3 DP107-like peptides exhibited potent levels of antiviral activity. These peptides include, for example, peptides T-40, T-172 to T-175, T-178, T-184 and T-185.

CD analysis reveals that a number of the peptides exhibit detectable to substantial level of helical structure, which is summarized in FIG. 29C.

The results summarized in FIGS. 30A-C demonstrate that a number of the DP178-like peptides tested exhibit a range of anti-viral activity. These peptides include, for example, peptides 194 to 211, as evidenced by their low IC₅₀ values. In fact, peptides 201 to 205 exhibit IC₅₀ values in the nanogram/ml range. In addition, many of the DP178-like peptides exhibited some level of helicity.

Thus, the computer assisted searches described, hereinabove, have successfully identified viral peptide domains that represent highly promising anti-HPIV3 antiviral compounds.

19. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP178/DP107 ANALOGS IN SIMIAN IMMUNODEFICIENCY VIRUS

FIG. 31 represents search results for SIV isolate MM251 (PC/Gene® protein sequence PENV_SIVM2). Both 107×178×4 and ALLMOTI5 search motifs identified two regions with similarities to DP107 and/or DP178.

The peptide regions found by 107×178×4 were located at amino acid residues 156-215 and 277-289. The peptide regions found by ALLMOTI5 were located at amino acid residues 156-219 and 245-286. Both motifs, therefore, identify similar regions.

Interestingly, the first SIV peptide region (i.e., from amino acid residue 156 to approximately amino acid residue 219) correlates with a DP107 region, while the second region identified (i.e., from approximately amino acid residue 245 to approximately amino acid residue 289) correlates with the DP178 region of HIV. In fact, an alignment of SIV isolate MM251 and HIV isolate BRU, followed by a selection of the best peptide matches for HIV DP107 and DP178, reveals that the best matches are found within the peptide regions identified by the 107×178×4 and ALLMOTI5 search motifs.

It should be noted that a potential coiled-coil region at amino acid residues 242-282 is predicted by the Lupas program. This is similar to the observation in HIV in which the coiled-coil is predicted by the Lupas program to be in the DP178 rather than in the DP107 region. It is possible, therefore, that SIV may be similar to HIV in that it may contain a coiled-coil structure in the DP107 region, despite such a structure being missed by the Lupas algorithm. Likewise, it may be that the region corresponding to a DP178 analog in SIV may exhibit an undefined structure, despite the Lupas program's prediction of a coiled-coil structure.

20. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP178/DP107 ANALOGS IN EPSTEIN-BARR VIRUS

The results presented herein describe the identification of DP178/DP107 analogs within two different Epstein-Barr Virus proteins. Epstein-Barr is a human herpes virus which is the causative agent of, for example, infectious mononucleosis (IM), and is also associated with nasopharyngeal carcinomas (NPC), Burkitt's lymphoma and other diseases. The virus predominantly exists in the latent form and is activated by a variety of stimuli.

FIG. 32 depicts the search motif results for the Epstein-Barr Virus (Strain B95-8; PC/Gene® protein sequence PVGLB_EBV) glycoprotein gp110 precursor (gp115). The 107×178×4 motif identified two regions of interest, namely the regions covered by amino acid residues 95-122 and 631-658. One PZIP region was identified at amino acid residue 732-752 which is most likely a cytoplasmic region of the protein. The Lupas algorithm predicts a coiled-coil structure for amino acids 657-684. No ALLMOTI5 regions were identified.

FIG. 33 depicts the search motif results for the Zebra (or EB1) trans-activator protein (BZLF1) of the above-identified Epstein-Barr virus. This protein is a transcription factor which represents the primary mediator of viral reactivation. It is a member of the b-ZIP family of transcription factors and shares significant homology with the basic DNA-binding and dimerization domains of the cellular oncogenes c-fos and C/EBP. The Zebra protein functions as a homodimer.

Search results domonstrate that the Zebra protein exhibits a single region which is predicted to be either of DP107 or DP178 similarity, and is found between the known DNA binding and dimerization regions of the protein. Specifically, this region is located at amino acid residues 193-220, as shown in FIG. 33. The Lupas program predicted no coiled-coil regions.

21. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP178/DP107 ANALOGS IN MEASLES VIRUS

FIG. 34 illustrates the motif search results for the fusion protein F1 of measles virus, strain Edmonston (PC Gene® protein sequence PVGLF_MEASE), successfully identifying DP178/DP107 analogs.

The 107×178×4 motif identifies a single region at amino acid residues 228-262. The ALLMOTI5 search motif identifies three regions, including amino acid residues 116-184, 228-269 and 452-500. Three regions containing proline residues followed by a leucine zipper-like sequence were found beginning at proline residues 214, 286 and 451.

The Lupas program identified two regions it predicted had potential for coiled-coil structure, which include amino acid residues 141-172 and 444-483.

22. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP178/DP107 ANALOGS IN HEPATITIS B VIRUS

FIG. 35 depicts the results of a PZIP motif search conducted on the Hepatitis B virus subtype AYW. Two regions of interest within the major surface antigen precursor S protein were identified. The first lies just C-terminal to the proposed fusion peptide of the major surface antigen (Hbs) which is found at amino acid residues 174-191. The second region is located at amino acid residues 233-267. The Lupas program predicts no coiled-coil repeat regions.

In order to test the potential anti-HBV antiviral activity of these D178/DP107 analog regions, peptides derived from area around the analog regions are synthesized, as shown in FIGS. 52A-B. These peptides represent one amino acid peptide “walks” through the putative DP178/DP107 analog regions. The peptides are synthesized according to standard Fmoc chemistry on Rinkamide MBHA resins to provide for carboxy terminal blockade (Chang, C. D. and Meinhofer, J., 1978, Int. J. Pept Protein Res. 11:246-249; Fields, G. B. and Noble, R. L., 1990, Int. J. Pept. Protein Res. 35:161-214). Following complete synthesis, the peptide amino-terminus is blocked through automated acetylation and the peptide is cleaved with trifluoroacetic acid (TFA) and the appropriate scavengers (King, D. S. et al., 1990, Int. J. Pept. Res. 36:255-266). After cleavage, the peptide is precipitated with ether and dried under vacuum for 24 hours.

The anti-HBV activity of the peptides is tested by utilizing standard assays to determine the test peptide concentration required to cause an acceptable (e.g., 90%) decrease in the amount of viral progeny formed by cells exposed to an HBV viral inoculum. Candidate antivial peptides are further characterized in model systems such as wood chuck tissue culture and animal systems, prior to testing on humans.

23. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP178/DP107 ANALOGS IN SIMIAN MASON-PFIZER MONKEY VIRUS

The results depicted herein illustrate the results of search motifs conducted on the Simian Mason-Pfizer monkey virus. The motifs reveal DP178/DP107 analogs within the enveloped (TM) protein GP20, as shown in FIG. 36.

The 107×178×4 motifs identifies a region at amino acid residues 422-470. The ALLMOTI5 finds a region at amino acid residues 408-474. The Lupas program predicted a coiled-coil structure a amino acids 424-459.

24. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP178/DP107 ANALOGS IN BACTERIAL PROTEINS

The results presented herein demonstrate the identification of DP178/DP107 analogs corresponding to sequences present in proteins of a variety of bacterial species.

FIG. 37 depicts the search motif results for the Pseudomonas aeruginosa fimbrial protein (Pilin). Two regions were identified by motifs 107×178×4 and ALLMOTI5. The regions located at amino acid residues 30-67 and 80-144 were identified by the 107×178×4 motif. The regions at amino acid residues 30-68 and 80-125 were identified by the ALLMOTI5.

FIG. 38 depicts the search motif results for the Pseudomonas gonorrhoeae fimbrial protein (Pilin). A single region was identified by both the 107×178×4 and the ALLMOTI5 motifs. The region located at amino acid residues 66-97 was identified by the 107×178×4 motif. The region located at amino acid residues 66-125 were identified by the ALLMOTI5 search motif. No coiled-coil regions were predicted by the Lupas program.

FIG. 39 depicts the search motif results for the Hemophilus Influenza fimbrial protein (Pilin). A single region was identified by both the 107×178×4 and the ALLMOTI5 motifs. The region located at amino acid residues 102-129 was identified by the 107×178×4 motif. The region located at amino acid residues 102-148 were identified by the ALLMOTI5 search motif. No coiled-coil regions were predicted by the Lupas program.

FIG. 40 depicts the search motif results for the Staphylococcus aureus toxic shock syndrome Hemophilus Influenza fimbrial protein (Pilin). A single region was identified by both the 107×178×4 and the ALLMOTI5 motifs. The region located at amino acid residues 102-129 was identified by the 107×178×4 motif. The region located at amino acid residues 102-148 were identified by the ALLMOTI5 search motif. No coiled-coil regions were predicted by the Lupas program.

FIG. 41 summarizes the motif search results conducted on the Staphylococcus aureus enterotoxin Type E protein. These results demonstrate the successful identification of DP178/DP107 analogs corresponding to peptide sequences within this protein, as described below.

The ALLMOTI5 motif identified a region at amino acid residues 22-27. The 107×178×4 motif identified two regions, with the first at amino acid residues 26-69 and the second at 88-115. A P12LZIPC motif search identified two regions, at amino acid residues 163-181 and 230-250.

The Lupas program predicted a region with a high propensity for coiling at amino acid residues 25-54. This sequence is completely contained within the first region identified by both ALLMOTI5 and 107×178×4 motifs.

FIG. 42 depicts the search motif results conducted on a second Staphylococcus aureus toxin, enterotoxin A. Two regions were identified by the ALLMOTI5 motif, at amino acid residues 22-70 and amino acid residues 164-205. The 107×178×4 motif found two regions, the first at amino acid residues 26-69 and the second at amino acid residues 165-192. A P23LZIPC motif search revealed a region at amino acid residues 216-250. No coiled-coil regions were predicted by the Lupas program.

FIG. 43 shows the motif search results conducted on the E. coli heat labile enterotoxin A protein, demonstrating that identification of DP178/DP107 analogs corresponding to peptides located within this protein. Two regions were identified by the ALLMOTI5 motIf, with the first residing at amino acid residues 55-115, and the second residing at amino acid residues 216-254. The 107×178×4 motif identified a single region at amino acid residues 78-105. No coiled-coil regions were predicted by the Lupas program.

25. EXAMPLE COMPUTER-ASSISTED IDENTIFICATION OF DP178/DP107 ANALOGS WITHIN VARIOUS HUMAN PROTEINS

The results presented herein demonstrate the identification of DP178/DP107 analogs corresponding to peptide sequences present within several different human proteins.

FIG. 44 illustrates the search motif results conducted on the human c-fos oncoprotein. The ALLMOTI5 motif identified a single region at amino acid residues 155-193. The 107×178×4 motif identified one region at amino acid residues 162-193. The Lupas program predicted a region at amino acid residues 148-201 to have coiled-coil structure.

FIG. 45 illustrates the search motif results conducted on the human lupus KU autoantigen protein P70. The ALLMOTI5 motif identified a single region at amino acid residues 229-280. The 107×178×4 motif identified one region at amino acid residues 235-292. The Lupas program predicted a region at amino acid residues 232-267 to have coiled-coil structure.

FIG. 46 illustrates the search motif results conducted on the human zinc finger protein 10. The ALLMOTI5 motif identified a single region at amino acid residues 29-81. The 107×178×4 motif identified one,region at amino acid residues 29-56. A P23LZIPC motif search found a single region at amino acid residues 420-457. The Lupas program predicted no coiled-coil regions.

26. EXAMPLE POTENTIAL MEASLES VIRUS DP178/DP107 ANALOGS: CD AND ANTIVIRAL CHARACTERIZATION

In the Example presented herein, measles (MeV) virus DP178-like peptides identified by utilizing the computer-assisted search motifs described in the Examples presented in Sections 9 and 21, above, are tested for anti-MeV activity. Additionally, circular dichroism (CD) structural analyses are conducted on the peptides, as discussed below. It is demonstrated that several of the identified peptides exhibit potent antiviral capability. Additionally, it is shown that none of the these peptides exhibit a substantial helical character.

26.1 MATERIALS AND METHODS

Structural analyses: The CD spectra were measured in a 10 mM sodium phosphate, 150 mM sodium chloride, pH 7.0, buffer at approximately 10 mM concentrations, using a 1 cm pathlength cell on a Jobin/Yvon Autodichrograph Mark V CD spedtrophotometer. Peptide concentrations were determined from A₂₈₀ using Edlehoch's method (1967, Biochemistry 6:1948).

Anti-MeV antiviral activity syncytial reduction assay: The assay utilized herein tested the ability of the peptides to disrupt the ability of Vero cells acutely infected with MeV (i.e., cells which are infected with a multiplicity of infection of 2-3) to fuse and cause syncytial formation on a monolayer of an uninfected line of Vero cells. The more potent the peptide, the lower the observed level of fusion, the greater the antiviral activity of the peptide.

Uninfected confluent monolayers of Vero cells were grown in microtiter wells in 10% FBS EMEM (Eagle Minimum Essential Medium w/o L-glutamine [Bio Whit taker Cat. No. 12-125F], with fetal bovine serum [FBS; which had been heat inactivated for 30 minutes at 56° C.; Bio Whittaker Cat. No. 14-501F) supplemented at 10%, antibiotics/antimycotics (Bio Whittaker Cat. No. 17-602E) added at 1%, and glutamine added at 1%.

To prepare acutely infected Vero cells for addition to the uninfected cells, cultures of acutely infected Vero cells were washed twice with HBSS (Bio Whittaker Cat. No. 10-543F) and cell monolayers were removed with trypsin (Bio Whittaker Cat. No. 17-161E). Once cells detached, media was added, any remaining clumps of cells were dispersed, and hemacytometer cell counts were performed.

The antiviral assay was conducted by, first, removing all media from the wells containing uninfected Vero cells, then adding peptides (at the dilutions described below) in 10% FBS EMEM, and 50-100 acutely MeV-infected Vero cells per well. Wells were then; incubated at 37° C. for a maximum of 18 hours.

On day 2, after cells in control wells were checked for fusion centers, media was removed from the wells, followed by addition, to each well, of approximately 50 μl 0.25% Crystal Violet stain in methanol. Wells were rinsed twice with water immediately, to remove excess stain and were then allowed to dry. The number of syncytia per well were then counted, using a dissecting microscope.

Anti-MeV antiviral activity plaque reduction assay: The assay utilized herein tested the ability of the peptides to disrupt the ability of MeV to infest permissive, uninfected Vero cells, leading to the infected cells' fusing with uninfected cells to produce syncytia. The lower the observed level of syncytial formation, the greater the antiviral activity of the peptide.

Monolayers of uninfected Vero cells are grown as described above.

The antiviral assay was conducted by, first, removing all media from the wells containing uninfected Vero cells, then adding peptides (at the dilutions described below) in 10% FBS EMEM, and MeV stock virus at a final concentration of 30 plaque forming units (PFU) per well. Wells were then incubated at 37° C. for a minimum of 36 hours and a maximum of 48 hours.

On day 2, after cells in control wells were checked for fusion centers, media was removed from the wells, followed by addition, to each well, of approximately 50 μl 0.25% Crystal Violet stain in methanol. Wells were rinsed twice with water immediately, to remove excess stain and were then allowed to dry. The number of syncytia per well were then counted, using a dissecting microscope.

Peptides: The peptides characterized in the study presented herein were peptides T-252A0 to T-256A0, T-257B1/C1, and T-258B1 to T-265B0, and T-266A0 to T-268A0, as shown in FIG. 47. These peptides represent a walk through the DP178-like region of the MeV fusion protein.

Each peptide was tested at 2-fold serial dilutions ranging from 100 μg/ml to approximately 100 ng/ml. For each of the assays, a well containing no peptide was also used.

26.2 RESULTS

The data summarized in FIGS. 47A-B represent antiviral and structural information obtained via “pepetide walks” through the DP178-like region of the MeV fusion protein.

As shown in FIGS. 47A-B, the MeV DP178-like peptides exhibited a range of antiviral activity as crude peptides. Several of these peptides were chosen for purification and further antiviral characterization. The IC₅₀ values for such peptides were determined, as shown in FIGS. 47B, and ranged from 1.35 μg/ml (T-257B1/C1) to 0.072 μg/ml (T-265B1). None of the DP178-like peptides showed, by CD analysis, a detectable level of helicity.

Thus, the computer assisted searches described, hereinabove, as in for example, the Example presented in Section 9, for example, successfully identified viral peptide domains that represent highly promising anti MeV antiviral compounds.

27. EXAMPLE POTENTIAL SIV DP178/DP107 ANALOGS: ANTIVIRAL CHARACTERIZATION

In the Example presented herein, simian immunodeficiency virus (SIV) DP178-like peptides identified by utilizing the computer-assisted search motifs described in the Examples presented in Sections 9, 12 and 19, above, were tested for anti-SIV activity. It is demonstrated that several of the identified peptides exhibit potent antiviral capability.

27.1 MATERIALS AND METHODS

Anti-SIV antiviral assays: The assay utilized herein were as reported in Langolis et al. (Langolis, A. J. et al., 1991, AIDS Research and Human Retroviruses 7:713-720).

Peptides: The peptides characterized in the study presented herein were peptides T-391 to T-400, as shown in FIGS. 48A-B. These peptides represent a walk through the DP178-like region of the SIV TM protein.

Each peptide was tested at 2-fold serial dilutions ranging from 100 μ/ml to approximately 100 ng/ml. For each of the assays, a well containing no peptide was also used.

27.2 RESULTS

The data summarized in FIGS. 48A-B represent antiviral information obtained via “peptide walks” through the DP178-like region of the SIV TM protein.

As shown in FIGS. 48A-B, peptides T-391 to T-400 were tested and exhibited a potent antiviral activity as crude peptides.

Thus, the computer assisted searches described, hereinabove, as in for example, the Example presented in Section 9, for example, successfully identified viral peptide domains that represent highly promising anti-SIV antiviral compounds.

28. EXAMPLE ANTI-VIRAL ACTIVITY OF DP107 AND DP-178 PEPTIDE TRUNCATIONS AND MUTATIONS

The Example presented in this Section represents a study of the antiviral activity of DP107 and DP178 truncations and mutations. It is demonstrated that several of these DP107 and DP178 modified peptides exhibit substantial antiviral activity.

28.1 MATERIALS AND METHODS

Anti-HIV assays: The antiviral assays performed were as those described, above, in Section 6.1. Assays utilized HIV-1/IIIb and/or HIV-2 NIHZ isolates. Purified peptides were used, unless otherwise noted in FIGS. 49A-L.

Peptides: The peptides characterized in the study presented herein were:

1) FIGS. 49A-L present peptides derived from the region around and containing the DP178 region of the HIV-1 BRU isolate. Specifically, this region spanned from gp41 amino acid residue 615 to amino acid residue 717. The peptides listed contain truncations of this region and/or mutations which vary from the DP178 amino acid sequence. Further, certain of the peptides have had amino- and/or carboxy-terminal groups either added or removed, as indicated in the figures; and

2) FIGS. 50A-B present peptides which represent truncations of DP107 and/or the gp41 region surrounding the DP107 amino acid sequence of HIV-1 BRU isolate. Certain of the peptides are unblocked or biotinylated, as indicated in the figure.

Blocked peptides contained an acyl N-terminus and an amido C-terminus.

28.2 RESULTS

Anti-HIV antiviral data was obtained with the group 1 DP178-derived peptides listed in FIGS. 49A-L. The full-length, non-mutant DP178 peptide (referred to in FIGS. 49A-L as T20) results shown are for 4 ng/ml.

In FIGS. 49A-49D, a number of the DP178 truncations exhibited a high level of antiviral activity, as evidenced by their low IC₅₀ values. These include, for example, test peptides T-50, T-624, T-636 to T-641, T-645 to T-650, T-652 to T-654 and T-656. T-50 represents a test peptide which contains a point mutation (see the “G” glycine residue substitution for a “H” histidine residue in FIG. 49A). The HIV-1-derived test peptides exhibited a distinct strain-specific antiviral activity, in that none of the peptides tested on the HIV-2 NIHZ isolate demonstrated appreciable anti-HIV-2 antiviral activity.

Among the peptides listed in FIGS. 49E-H, test peptides representing the amino (T-4) and carboxy (T-3) terminal halves of DP178 were tested. The amino terminal peptide was not active (IC₅₀>400 μg/ml), whereas the carboxy terminal peptide showed potent antiviral activity (IC₅₀=3 μg/ml). A number of additional test peptides also exhibited a high level of antiviral activity. These included, for example, T-61/T-102, T-217 to T-221, T-235, T-381, T-677, T-377, T-590, T-378, T-591, T-271 to T-272, T-611, T-222 to T-223 and T-60/T-224. Certain of the antiviral peptides contain point mutations and/or amino acid residue additions which vary from the DP178 amino acid sequence.

In FIGS. 49I-L, point mutations and/or amino and/or carboxy-terminal modifications are introduced into the DP178 amino acid sequence itself. As shown in the figures, the majority of the test peptides listed exhibit potent antiviral activity.

Truncations of the DP107 peptide (referred to in FIGS. 50A-B as T21) were also produced and tested, as shown in FIGS. 50A-B. FIGS. 50A-B also present data concerning blocked and unblocked peptides which contain additional amino acid residues from the gp41 region in which the DP107 sequence resides. Most of these peptides showed antiviral activity, as evidenced by their low IC₅₀ values.

Thus, the results presented in this Section demonstrate that not only do the full length DP107 and DP178 peptides exhibit potent antiviral activity, but truncations and/or mutant versions of these peptides can also possess substantial antiviral character.

29: EXAMPLE POTENTIAL EPSTEIN-BARR DP178/DP107 ANALOGS: ANTIVIRAL CHARACTERIZATION

In the Example presented herein, peptides derived from the Epstein-Barr (EBV) DP-178/DP107 analog region of the Zebra protein identified, above, in the Example presented in Section 20 are described and tested for anti-EBV activity. It is demonstrated that among these peptides are ones which exhibit potential anti-viral activity.

29.1 MATERIALS AND METHODS

Electrophoretic Mobility Shift Assays (EMSA): Briefly, an EBV Zebra protein was synthesized utilizing SP6 RNA polymerase in vitro transcription and,wheat germ in vitro translation systems (Promega Corporation recommendations; Butler, E. T. and Chamberlain, M. J., 1984, J. Biol. Chem. 257:5772; Pelham, H. R. B. and Jackson, R. J., 1976, Eur. J. Biochem. 67:247). The in vitro translated Zebra protein was then preincubated with increasing amounts of peptide up to 250 ng/ml prior to the addition of 10,000 to 20,000 c.p.m. of a ³²P-labeled Zebra response element DNA fragment. After a 20 minute incubation in the presence of the response element, the reaction was analyzed on a 4% non-denaturing polyacrylamide gel, followed by autoradiography, utilizing standard gel-shift procedures. The ability of a test peptide to prevent Zebra homodimer DNA binding was assayed by the peptide's ability to abolish the response element gel migration retardation characteristic of a protein-bound nucleic acid molecule.

Peptides: The peptides characterized in this study represent peptide walks through the region containing, and flanked on both sides by, the DP178/DP107 analog region identified in the Example presented in Section 20, above, and shown as shown in FIG. 33. Specifically, the peptide walks covered the region from amino acid residue 173 to amino acid residue 246 of the EBV Zebra protein.

Each of the tested peptides were analyzed at a range of concentrations, with 150 ng/ml being the lowest concentration at which any of the peptides exerted an inhibitory effect.

29.2 RESULTS

The EBV Zebra protein transcription factor contains a DP178/DP107 analog region, as demonstrated in the Example presented, above, in Section 20. This protein appears to be the primary factor responsible for the reactivation capability of the virus. A method by which the DNA-binding function of the Zebra virus may be abolished may, therefore, represent an effective antiviral technique. In order to identify potential anti-EBV DP178/DP107 peptides, therefore, peptides derived from the region identified in Section 20, above, were tested for their ability to inhibit Zebra protein DNA binding.

The test peptides' ability to inhibit Zebra protein DNA binding was assayed via the EMSA assays described, above, in Section 28.1. The data summarized in FIGS. 51A-C present the results of EMSA assays of the listed EBV test peptides. These peptides represent amino acid “walks” through the region containing, and flanked on both sides by, the DP178/DP107 analog region identified in the Example presented in Section 20, above, and shown as in FIG. 33. As shown in FIGS. 51A-C, the region from which these peptides are derived lies between EBV Zebra prote in amino acid residue 173 to 246. A number of the test peptides which were assayed exhibited an ability to inhibit Zebra protein homodimer DNA binding, including 439, 441, 444 and 445.

Those peptides which exhibit an ability to inhibit Zebra protein DNA binding represent potential anti-EBV antiviral compounds whose ability to inhibit EBV infection can be further characterized.

The present invention is not to be limited in scope by the specific embodiments described which are intended as single illustrations of individual aspects of the invention, and functionally equivalent methods and components are within the scope of the invention. Indeed, various modifications of the invention, in addition to those shown and described herein will become apparent to those skilled in the art from the foregoing description and accompanying drawings. Such modifications are intended to fall within the scope of the appended claims.

239 36 amino acids amino acid unknown peptide 1 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 2 Ser Ser Glu Ser Phe Thr Leu Leu Glu Gln Trp Asn Asn Trp Lys Leu 1 5 10 15 Gln Leu Ala Glu Gln Trp Leu Glu Gln Ile Asn Glu Lys His Tyr Leu 20 25 30 Glu Asp Ile Ser 35 36 amino acids amino acid unknown peptide 3 Tyr Thr Asn Thr Ile Tyr Thr Leu Leu Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 4 Tyr Thr Gly Ile Ile Tyr Asn Leu Leu Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Asn Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 5 Tyr Thr Ser Leu Ile Tyr Ser Leu Leu Glu Lys Ser Gln Thr Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 6 Leu Glu Ala Asn Ile Ser Lys Ser Leu Glu Gln Ala Gln Ile Gln Gln 1 5 10 15 Glu Lys Asn Met Tyr Glu Leu Gln Lys Leu Asn Ser Trp Asp Ile Phe 20 25 30 Gly Asn Trp Phe 35 36 amino acids amino acid unknown peptide 7 Leu Glu Ala Asn Ile Ser Gln Ser Leu Glu Gln Ala Gln Ile Gln Gln 1 5 10 15 Glu Lys Asn Met Tyr Glu Leu Gln Lys Leu Asn Ser Trp Asp Val Phe 20 25 30 Thr Asn Trp Leu 35 41 amino acids amino acid unknown peptide 8 Cys Gly Gly Asn Asn Leu Leu Arg Ala Ile Glu Ala Gln Gln His Leu 1 5 10 15 Leu Gln Leu Thr Val Trp Gly Ile Lys Gln Leu Gln Ala Arg Ile Leu 20 25 30 Ala Val Glu Arg Tyr Leu Lys Asp Gln 35 40 17 amino acids amino acid unknown peptide 9 Leu Gln Ala Arg Ile Leu Ala Val Glu Arg Tyr Leu Lys Asp Gln Gln 1 5 10 15 Gln 38 amino acids amino acid unknown peptide 10 Gln Gln Leu Leu Asp Val Val Lys Arg Gln Gln Glu Met Leu Arg Leu 1 5 10 15 Thr Val Trp Gly Thr Lys Asn Leu Gln Ala Arg Val Thr Ala Ile Glu 20 25 30 Lys Tyr Leu Lys Asp Gln 35 21 base pairs nucleic acid single linear DNA 11 ATGACGCTGA CGGTACAGGC C 21 33 base pairs nucleic acid single linear DNA 12 TGACTAAGCT TAATACCACA GCCAATTTGT TAT 33 22 base pairs nucleic acid single linear DNA 13 GGAGCTGCTT GGGGCCCCAG AC 22 40 base pairs nucleic acid single linear DNA 14 CCAAATCCCC AGGAGCTGCT CGAGCTGCAC TATACCAGAC 40 35 base pairs nucleic acid single linear DNA 15 ATAGCTTCTA GATTAATTGT TAATTTCTCT GTCCC 35 48 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 16 Tyr Thr Ser Val Ile Thr Ile Glu Leu Ser Asn Ile Lys Glu Asn Lys 1 5 10 15 Cys Asn Gly Thr Asp Ala Lys Val Lys Leu Ile Lys Gln Glu Leu Asp 20 25 30 Lys Tyr Lys Asn Ala Val Thr Glu Leu Gln Leu Leu Met Gln Ser Thr 35 40 45 37 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 17 Phe Tyr Asp Pro Leu Val Phe Pro Ser Asp Glu Phe Asp Ala Ser Ile 1 5 10 15 Ser Gln Val Asn Glu Lys Ile Asn Gln Ser Leu Ala Phe Ile Arg Lys 20 25 30 Ser Asp Glu Leu Leu 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 18 Ile Thr Leu Asn Asn Ser Val Ala Leu Asp Pro Ile Asp Ile Ser Ile 1 5 10 15 Glu Leu Asn Lys Ala Lys Ser Asp Leu Glu Glu Ser Lys Glu Trp Ile 20 25 30 Arg Arg Ser 35 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 19 Ala Leu Gly Val Ala Thr Ser Ala Gln Ile Thr Ala Ala Val Ala Leu 1 5 10 15 Val Glu Ala Lys Gln Ala Arg Ser Asp Ile Glu Lys Leu Lys Glu Ala 20 25 30 Ile Arg 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 20 Val Ala Val Ser Lys Val Leu His Leu Glu Gly Glu Val Asn Lys Ile 1 5 10 15 Ala Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly Val 20 25 30 Ser 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 21 Ala Val Ser Lys Val Leu His Leu Glu Gly Glu Val Asn Lys Ile Ala 1 5 10 15 Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly Val Ser 20 25 30 Val 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 22 Val Ser Lys Val Leu His Leu Glu Gly Glu Val Asn Lys Ile Ala Leu 1 5 10 15 Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly Val Ser Val 20 25 30 Leu 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 23 Ser Lys Val Leu His Leu Glu Gly Glu Val Asn Lys Ile Ala Leu Leu 1 5 10 15 Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly Val Ser Val Leu 20 25 30 Thr 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 24 Lys Val Leu His Leu Glu Gly Glu Val Asn Lys Ile Ala Leu Leu Ser 1 5 10 15 Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly Val Ser Val Leu Thr 20 25 30 Ser 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 25 Leu Glu Gly Glu Val Asn Lys Ile Ala Leu Leu Ser Thr Asn Lys Ala 1 5 10 15 Val Val Ser Leu Ser Asn Gly Val Ser Val Leu Thr Ser Lys Val Leu 20 25 30 Asp 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 26 Gly Glu Val Asn Lys Ile Ala Leu Leu Ser Thr Asn Lys Ala Val Val 1 5 10 15 Ser Leu Ser Asn Gly Val Ser Val Leu Thr Ser Lys Val Leu Asp Leu 20 25 30 Lys 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 27 Glu Val Asn Lys Ile Ala Leu Leu Ser Thr Asn Lys Ala Val Val Ser 1 5 10 15 Leu Ser Asn Gly Val Ser Val Leu Thr Ser Lys Val Leu Asp Leu Lys 20 25 30 Asn 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 28 Val Asn Lys Ile Ala Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu 1 5 10 15 Ser Asn Gly Val Ser Val Leu Thr Ser Lys Val Leu Asp Leu Lys Asn 20 25 30 Tyr 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 29 Asn Lys Ile Ala Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser 1 5 10 15 Asn Gly Val Ser Val Leu Thr Ser Lys Val Leu Asp Leu Lys Asn Tyr 20 25 30 Ile 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 30 Lys Ile Ala Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn 1 5 10 15 Gly Val Ser Val Leu Thr Ser Lys Val Leu Asp Leu Lys Asn Tyr Ile 20 25 30 Asp 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 31 Ile Ala Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly 1 5 10 15 Val Ser Val Leu Thr Ser Lys Val Leu Asp Leu Lys Asn Tyr Ile Asp 20 25 30 Lys 33 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 32 Ala Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly Val 1 5 10 15 Ser Val Leu Thr Ser Lys Val Leu Asp Leu Lys Asn Tyr Ile Asp Lys 20 25 30 Gln 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 33 Thr Leu Asn Asn Ser Val Ala Leu Asp Pro Ile Asp Ile Ser Ile Glu 1 5 10 15 Leu Asn Lys Ala Lys Ser Asp Leu Glu Glu Ser Lys Glu Trp Ile Arg 20 25 30 Arg Ser Asn 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 34 Leu Asn Asn Ser Val Ala Leu Asp Pro Ile Asp Ile Ser Ile Glu Leu 1 5 10 15 Asn Lys Ala Lys Ser Asp Leu Glu Glu Ser Lys Glu Trp Ile Arg Arg 20 25 30 Ser Asn Gln 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 35 Asn Asn Ser Val Ala Leu Asp Pro Ile Asp Ile Ser Ile Glu Leu Asn 1 5 10 15 Lys Ala Lys Ser Asp Leu Glu Glu Ser Lys Glu Trp Ile Arg Arg Ser 20 25 30 Asn Gln Lys 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 36 Asn Ser Val Ala Leu Asp Pro Ile Asp Ile Ser Ile Glu Leu Asn Lys 1 5 10 15 Ala Lys Ser Asp Leu Glu Glu Ser Lys Glu Trp Ile Arg Arg Ser Asn 20 25 30 Gln Lys Leu 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 37 Ser Val Ala Leu Asp Pro Ile Asp Ile Ser Ile Glu Leu Asn Lys Ala 1 5 10 15 Lys Ser Asp Leu Glu Glu Ser Lys Glu Trp Ile Arg Arg Ser Asn Gln 20 25 30 Lys Leu Asp 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 38 Val Ala Leu Asp Pro Ile Asp Ile Ser Ile Glu Leu Asn Lys Ala Lys 1 5 10 15 Ser Asp Leu Glu Glu Ser Lys Glu Trp Ile Arg Arg Ser Asn Gln Lys 20 25 30 Leu Asp Ser 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 39 Ala Leu Asp Pro Ile Asp Ile Ser Ile Glu Leu Asn Lys Ala Lys Ser 1 5 10 15 Asp Leu Glu Glu Ser Lys Glu Trp Ile Arg Arg Ser Asn Gln Lys Leu 20 25 30 Asp Ser Ile 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 40 Leu Asp Pro Ile Asp Ile Ser Ile Glu Leu Asn Lys Ala Lys Ser Asp 1 5 10 15 Leu Glu Glu Ser Lys Glu Trp Ile Arg Arg Ser Asn Gln Lys Leu Asp 20 25 30 Ser Ile Gly 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 41 Asp Pro Ile Asp Ile Ser Ile Glu Leu Asn Lys Ala Lys Ser Asp Leu 1 5 10 15 Glu Glu Ser Lys Glu Trp Ile Arg Arg Ser Asn Gln Lys Leu Asp Ser 20 25 30 Ile Gly Asn 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 42 Pro Ile Asp Ile Ser Ile Glu Leu Asn Lys Ala Lys Ser Asp Leu Glu 1 5 10 15 Glu Ser Lys Glu Trp Ile Arg Arg Ser Asn Gln Lys Leu Asp Ser Ile 20 25 30 Gly Asn Trp 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 43 Ile Asp Ile Ser Ile Glu Leu Asn Lys Ala Lys Ser Asp Leu Glu Glu 1 5 10 15 Ser Lys Glu Trp Ile Arg Arg Ser Asn Gln Lys Leu Asp Ser Ile Gly 20 25 30 Asn Trp His 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 44 Asp Ile Ser Ile Glu Leu Asn Lys Ala Lys Ser Asp Leu Glu Glu Ser 1 5 10 15 Lys Glu Trp Ile Arg Arg Ser Asn Gln Lys Leu Asp Ser Ile Gly Asn 20 25 30 Trp His Gln 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 45 Ile Ser Ile Glu Leu Asn Lys Ala Lys Ser Asp Leu Glu Glu Ser Lys 1 5 10 15 Glu Trp Ile Arg Arg Ser Asn Gln Lys Leu Asp Ser Ile Gly Asn Trp 20 25 30 His Gln Ser 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 46 Ser Ile Glu Leu Asn Lys Ala Lys Ser Asp Leu Glu Glu Ser Lys Glu 1 5 10 15 Trp Ile Arg Arg Ser Asn Gln Lys Leu Asp Ser Ile Gly Asn Trp His 20 25 30 Gln Ser Ser 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 47 Ile Glu Leu Asn Lys Ala Lys Ser Asp Leu Glu Glu Ser Lys Glu Trp 1 5 10 15 Ile Arg Arg Ser Asn Gln Lys Leu Asp Ser Ile Gly Asn Trp His Gln 20 25 30 Ser Ser Thr 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 48 Glu Leu Asn Lys Ala Lys Ser Asp Leu Glu Glu Ser Lys Glu Trp Ile 1 5 10 15 Arg Arg Ser Asn Gln Lys Leu Asp Ser Ile Gly Asn Trp His Gln Ser 20 25 30 Ser Thr Thr 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 49 Thr Ala Ala Val Ala Leu Val Glu Ala Lys Gln Ala Arg Ser Asp Ile 1 5 10 15 Glu Lys Leu Lys Glu Ala Ile Arg Asp Thr Asn Lys Ala Val Gln Ser 20 25 30 Val Gln Ser 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 50 Ala Val Ala Leu Val Glu Ala Lys Gln Ala Arg Ser Asp Ile Glu Lys 1 5 10 15 Leu Lys Glu Ala Ile Arg Asp Thr Asn Lys Ala Val Gln Ser Val Gln 20 25 30 Ser Ser Ile 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 51 Leu Val Glu Ala Lys Gln Ala Arg Ser Asp Ile Glu Lys Leu Lys Glu 1 5 10 15 Ala Ile Arg Asp Thr Asn Lys Ala Val Gln Ser Val Gln Ser Ser Ile 20 25 30 Gly Asn Leu 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 52 Val Glu Ala Lys Gln Ala Arg Ser Asp Ile Glu Lys Leu Lys Glu Ala 1 5 10 15 Ile Arg Asp Thr Asn Lys Ala Val Gln Ser Val Gln Ser Ser Ile Gly 20 25 30 Asn Leu Ile 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 53 Glu Ala Lys Gln Ala Arg Ser Asp Ile Glu Lys Leu Lys Glu Ala Ile 1 5 10 15 Arg Asp Thr Asn Lys Ala Val Gln Ser Val Gln Ser Ser Ile Gly Asn 20 25 30 Leu Ile Val 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 54 Ala Lys Gln Ala Arg Ser Asp Ile Glu Lys Leu Lys Glu Ala Ile Arg 1 5 10 15 Asp Thr Asn Lys Ala Val Gln Ser Val Gln Ser Ser Ile Gly Asn Leu 20 25 30 Ile Val Ala 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 55 Lys Gln Ala Arg Ser Asp Ile Glu Lys Leu Lys Glu Ala Ile Arg Asp 1 5 10 15 Thr Asn Lys Ala Val Gln Ser Val Gln Ser Ser Ile Gly Asn Leu Ile 20 25 30 Val Ala Ile 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 56 Gln Ala Arg Ser Asp Ile Glu Lys Leu Lys Glu Ala Ile Arg Asp Thr 1 5 10 15 Asn Lys Ala Val Gln Ser Val Gln Ser Ser Ile Gly Asn Leu Ile Val 20 25 30 Ala Ile Lys 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 57 Ala Arg Ser Asp Ile Glu Lys Leu Lys Glu Ala Ile Arg Asp Thr Asn 1 5 10 15 Lys Ala Val Gln Ser Val Gln Ser Ser Ile Gly Asn Leu Ile Val Ala 20 25 30 Ile Lys Ser 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 58 Arg Ser Asp Ile Glu Lys Leu Lys Glu Ala Ile Arg Asp Thr Asn Lys 1 5 10 15 Ala Val Gln Ser Val Gln Ser Ser Ile Gly Asn Leu Ile Val Ala Ile 20 25 30 Lys Ser Val 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 59 Ser Asp Ile Glu Lys Leu Lys Glu Ala Ile Arg Asp Thr Asn Lys Ala 1 5 10 15 Val Gln Ser Val Gln Ser Ser Ile Gly Asn Leu Ile Val Ala Ile Lys 20 25 30 Ser Val Gln 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 60 Lys Leu Lys Glu Ala Ile Arg Asp Thr Asn Lys Ala Val Gln Ser Val 1 5 10 15 Gln Ser Ser Ile Gly Asn Leu Ile Val Ala Ile Lys Ser Val Gln Asp 20 25 30 Tyr Val Asn 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 61 Leu Lys Glu Ala Ile Arg Asp Thr Asn Lys Ala Val Gln Ser Val Gln 1 5 10 15 Ser Ser Ile Gly Asn Leu Ile Val Ala Ile Lys Ser Val Gln Asp Tyr 20 25 30 Val Asn Lys 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 62 Ala Ile Arg Asp Thr Asn Lys Ala Val Gln Ser Val Gln Ser Ser Ile 1 5 10 15 Gly Asn Leu Ile Val Ala Ile Lys Ser Val Gln Asp Tyr Val Asn Lys 20 25 30 Glu Ile Val 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 63 Trp Gln Glu Trp Glu Arg Lys Val Asp Phe Leu Glu Glu Asn Ile Thr 1 5 10 15 Ala Leu Leu Glu Glu Ala Gln Ile Gln Gln Glu Lys Asn Met Tyr Glu 20 25 30 Leu Gln Lys 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 64 Gln Glu Trp Glu Arg Lys Val Asp Phe Leu Glu Glu Asn Ile Thr Ala 1 5 10 15 Leu Leu Glu Glu Ala Gln Ile Gln Gln Glu Lys Asn Met Tyr Glu Leu 20 25 30 Gln Lys Leu 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” (ix) FEATURE (A) NAME/KEY Modified-site (B) LOCATION 48 (D) OTHER INFORMATION /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 65 Glu Trp Glu Arg Lys Val Asp Phe Leu Glu Glu Asn Ile Thr Ala Leu 1 5 10 15 Leu Glu Glu Ala Gln Ile Gln Gln Glu Lys Asn Met Tyr Glu Leu Gln 20 25 30 Lys Leu Asn 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 66 Trp Glu Arg Lys Val Asp Phe Leu Glu Glu Asn Ile Thr Ala Leu Leu 1 5 10 15 Glu Glu Ala Gln Ile Gln Gln Glu Lys Asn Met Tyr Glu Leu Gln Lys 20 25 30 Leu Asn Ser 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 67 Glu Arg Lys Val Asp Phe Leu Glu Glu Asn Ile Thr Ala Leu Leu Glu 1 5 10 15 Glu Ala Gln Ile Gln Gln Glu Lys Asn Met Tyr Glu Leu Gln Lys Leu 20 25 30 Asn Ser Trp 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 68 Arg Lys Val Asp Phe Leu Glu Glu Asn Ile Thr Ala Leu Leu Glu Glu 1 5 10 15 Ala Gln Ile Gln Gln Glu Lys Asn Met Tyr Glu Leu Gln Lys Leu Asn 20 25 30 Ser Trp Asp 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 69 Lys Val Asp Phe Leu Glu Glu Asn Ile Thr Ala Leu Leu Glu Glu Ala 1 5 10 15 Gln Ile Gln Gln Glu Lys Asn Met Tyr Glu Leu Gln Lys Leu Asn Ser 20 25 30 Trp Asp Val 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 70 Val Asp Phe Leu Glu Glu Asn Ile Thr Ala Leu Leu Glu Glu Ala Gln 1 5 10 15 Ile Gln Gln Glu Lys Asn Met Tyr Glu Leu Gln Lys Leu Asn Ser Trp 20 25 30 Asp Val Phe 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 71 Asp Phe Leu Glu Glu Asn Ile Thr Ala Leu Leu Glu Glu Ala Gln Ile 1 5 10 15 Gln Gln Glu Lys Asn Met Tyr Glu Leu Gln Lys Leu Asn Ser Trp Asp 20 25 30 Val Phe Gly 35 35 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 72 Phe Leu Glu Glu Asn Ile Thr Ala Leu Leu Glu Glu Ala Gln Ile Gln 1 5 10 15 Gln Glu Lys Asn Met Tyr Glu Leu Gln Lys Leu Asn Ser Trp Asp Val 20 25 30 Phe Gly Asn 35 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 73 Leu His Arg Ile Asp Leu Gly Pro Pro Ile Ser Leu Glu Arg Leu Asp 1 5 10 15 Val Gly Thr Asn Leu Gly Asn Ala Ile Ala Lys Leu Glu Ala Lys Glu 20 25 30 Leu Leu 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 74 His Arg Ile Asp Leu Gly Pro Pro Ile Ser Leu Glu Arg Leu Asp Val 1 5 10 15 Gly Thr Asn Leu Gly Asn Ala Ile Ala Lys Leu Glu Ala Lys Glu Leu 20 25 30 Leu Glu 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 75 Arg Ile Asp Leu Gly Pro Pro Ile Ser Leu Glu Arg Leu Asp Val Gly 1 5 10 15 Thr Asn Leu Gly Asn Ala Ile Ala Lys Leu Glu Ala Lys Glu Leu Leu 20 25 30 Glu Ser 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 76 Ile Asp Leu Gly Pro Pro Ile Ser Leu Glu Arg Leu Asp Val Gly Thr 1 5 10 15 Asn Leu Gly Asn Ala Ile Ala Lys Leu Glu Ala Lys Glu Leu Leu Glu 20 25 30 Ser Ser 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 77 Asp Leu Gly Pro Pro Ile Ser Leu Glu Arg Leu Asp Val Gly Thr Asn 1 5 10 15 Leu Gly Asn Ala Ile Ala Lys Leu Glu Ala Lys Glu Leu Leu Glu Ser 20 25 30 Ser Asp 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 78 Leu Gly Pro Pro Ile Ser Leu Glu Arg Leu Asp Val Gly Thr Asn Leu 1 5 10 15 Gly Asn Ala Ile Ala Lys Leu Glu Ala Lys Glu Leu Leu Glu Ser Ser 20 25 30 Asp Gln 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 79 Gly Pro Pro Ile Ser Leu Glu Arg Leu Asp Val Gly Thr Asn Leu Gly 1 5 10 15 Asn Ala Ile Ala Lys Leu Glu Ala Lys Glu Leu Leu Glu Ser Ser Asp 20 25 30 Gln Ile 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 80 Pro Pro Ile Ser Leu Glu Arg Leu Asp Val Gly Thr Asn Leu Gly Asn 1 5 10 15 Ala Ile Ala Lys Leu Glu Ala Lys Glu Leu Leu Glu Ser Ser Asp Gln 20 25 30 Ile Leu 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 81 Pro Ile Ser Leu Glu Arg Leu Asp Val Gly Thr Asn Leu Gly Asn Ala 1 5 10 15 Ile Ala Lys Leu Glu Ala Lys Glu Leu Leu Glu Ser Ser Asp Gln Ile 20 25 30 Leu Arg 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 82 Ser Leu Glu Arg Leu Asp Val Gly Thr Asn Leu Gly Asn Ala Ile Ala 1 5 10 15 Lys Leu Glu Ala Lys Glu Leu Leu Glu Ser Ser Asp Gln Ile Leu Arg 20 25 30 Ser Met 34 amino acids amino acid unknown peptide Modified-site /label= A /note= “Preceeding this amino acid, there may be an amino group, a hydrophobic group, an acetyl group, a 9-fluorenylmethoxycarbonyl group, or a macromolecular carrier group.” Modified-site 48 /label= B /note= “Following this amino acid, there may be a carboxyl group, an amido group, a T-butyloxycarbonyl group, or a macromolecular carrier group.” 83 Leu Glu Arg Leu Asp Val Gly Thr Asn Leu Gly Asn Ala Ile Ala Lys 1 5 10 15 Leu Glu Ala Lys Glu Leu Leu Glu Ser Ser Asp Gln Ile Leu Arg Ser 20 25 30 Met Lys 28 amino acids amino acid unknown peptide 84 Met Lys Gln Leu Glu Asp Lys Val Glu Glu Leu Leu Ser Lys Asn Tyr 1 5 10 15 His Leu Glu Asn Glu Val Ala Arg Leu Lys Lys Leu 20 25 28 amino acids amino acid unknown peptide 85 Thr Asp Thr Leu Gln Ala Glu Thr Asp Gln Leu Glu Asp Glu Lys Ser 1 5 10 15 Ala Leu Gln Thr Glu Ile Ala Asn Leu Leu Lys Glu 20 25 28 amino acids amino acid unknown peptide 86 Ile Ala Arg Leu Glu Glu Lys Val Lys Thr Leu Lys Ala Gln Asn Ser 1 5 10 15 Glu Leu Ala Ser Thr Ala Asn Met Leu Arg Glu Gln 20 25 28 amino acids amino acid unknown peptide 87 Glu Gln Lys Leu Ile Ser Glu Glu Asp Leu Leu Glu Lys Arg Arg Glu 1 5 10 15 Gln Leu Lys His Lys Leu Glu Gln Leu Arg Asn Ser 20 25 28 amino acids amino acid unknown peptide 88 Ile Glu Lys Thr Asn Glu Lys Phe His Gln Ile Glu Lys Glu Phe Ser 1 5 10 15 Glu Val Glu Gly Arg Ile Gln Asp Leu Glu Lys Tyr 20 25 38 amino acids amino acid unknown peptide 89 Asn Asn Leu Leu Arg Ala Ile Glu Ala Gln Gln His Leu Leu Gln Leu 1 5 10 15 Thr Val Trp Gly Ile Lys Gln Leu Gln Ala Arg Ile Leu Ala Val Glu 20 25 30 Arg Tyr Leu Lys Asp Gln 35 338 amino acids amino acid unknown protein 90 Phe Leu Gly Phe Leu Gly Ala Ala Gly Ser Thr Met Gly Ala Arg Ser 1 5 10 15 Met Thr Leu Thr Val Gln Ala Arg Gln Leu Leu Ser Gly Ile Val Gln 20 25 30 Gln Gln Asn Asn Leu Leu Arg Ala Ile Glu Ala Gln Gln His Leu Leu 35 40 45 Gln Leu Thr Val Trp Gly Ile Lys Gln Leu Gln Ala Arg Ile Leu Ala 50 55 60 Val Glu Arg Tyr Leu Lys Asp Gln Gln Leu Leu Gly Ile Trp Gly Cys 65 70 75 80 Ser Gly Lys Leu Ile Cys Thr Thr Ala Val Pro Trp Asn Ala Ser Trp 85 90 95 Ser Asn Lys Ser Leu Glu Gln Ile Trp Asn Asn Met Thr Trp Met Glu 100 105 110 Trp Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile 115 120 125 Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu 130 135 140 Leu Asp Lys Trp Ala Ser Leu Trp Asn Trp Phe Asn Ile Thr Asn Trp 145 150 155 160 Leu Trp Tyr Ile Lys Ile Phe Ile Met Ile Val Gly Gly Leu Val Gly 165 170 175 Leu Arg Ile Val Phe Ala Val Leu Ser Ile Val Asn Arg Val Arg Gln 180 185 190 Gly Tyr Ser Pro Leu Ser Phe Gln Thr His Leu Pro Thr Pro Arg Gly 195 200 205 Pro Asp Arg Pro Glu Gly Ile Glu Glu Glu Gly Gly Glu Arg Asp Arg 210 215 220 Asp Arg Ser Ile Arg Leu Val Asn Gly Ser Leu Ala Leu Ile Trp Asp 225 230 235 240 Asp Leu Arg Ser Leu Cys Leu Phe Ser Tyr His Arg Leu Arg Asp Leu 245 250 255 Leu Leu Ile Val Thr Arg Ile Val Glu Leu Leu Gly Arg Arg Gly Trp 260 265 270 Glu Ala Leu Lys Tyr Trp Trp Asn Leu Leu Gln Tyr Trp Ser Gln Glu 275 280 285 Leu Lys Asn Ser Ala Val Ser Leu Leu Asn Ala Thr Ala Ile Ala Val 290 295 300 Ala Glu Gly Thr Asp Arg Val Ile Glu Val Val Gln Gly Ala Cys Arg 305 310 315 320 Ala Ile Arg His Ile Pro Arg Arg Ile Arg Gln Gly Leu Glu Arg Ile 325 330 335 Leu Leu 437 amino acids amino acid unknown protein 91 Phe Leu Gly Phe Leu Leu Gly Val Gly Ser Ala Ile Ala Ser Gly Val 1 5 10 15 Ala Val Ser Lys Val Leu His Leu Glu Gly Glu Val Asn Lys Ile Lys 20 25 30 Ser Ala Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly 35 40 45 Val Ser Val Leu Thr Ser Lys Val Leu Asp Leu Lys Asn Tyr Ile Asp 50 55 60 Lys Gln Leu Leu Pro Ile Val Asn Lys Gln Ser Cys Ser Ile Ser Asn 65 70 75 80 Ile Glu Thr Val Ile Glu Phe Gln Gln Lys Asn Asn Arg Leu Leu Glu 85 90 95 Ile Thr Arg Glu Phe Ser Val Asn Ala Gly Val Thr Thr Pro Val Ser 100 105 110 Thr Met Leu Thr Asn Ser Glu Leu Leu Ser Leu Ile Asn Asp Met Pro 115 120 125 Ile Thr Asn Asp Gln Lys Lys Leu Met Ser Asn Asn Val Gln Ile Val 130 135 140 Arg Gln Gln Ser Tyr Ser Ile Met Ser Ile Ile Lys Glu Glu Val Leu 145 150 155 160 Ala Tyr Val Val Gln Leu Pro Leu Tyr Gly Val Ile Asp Thr Pro Cys 165 170 175 Trp Lys Leu His Thr Ser Pro Leu Cys Thr Thr Asn Thr Lys Glu Gly 180 185 190 Ser Asn Ile Cys Leu Thr Arg Thr Asp Arg Gly Trp Tyr Cys Asp Asn 195 200 205 Ala Gly Ser Val Ser Phe Phe Pro Gln Ala Glu Thr Cys Lys Val Gln 210 215 220 Ser Asn Arg Val Phe Cys Asp Thr Met Asn Ser Leu Thr Leu Pro Ser 225 230 235 240 Glu Ile Asn Leu Cys Asn Val Asp Ile Phe Asn Pro Lys Tyr Asp Cys 245 250 255 Lys Ile Met Thr Ser Lys Thr Asp Val Ser Ser Ser Val Ile Thr Ser 260 265 270 Leu Gly Ala Ile Val Ser Cys Tyr Gly Lys Thr Lys Cys Thr Ala Ser 275 280 285 Asn Lys Asn Arg Gly Ile Ile Lys Thr Phe Ser Asn Gly Cys Asp Tyr 290 295 300 Val Ser Asn Lys Gly Met Asp Thr Val Ser Val Gly Asn Thr Leu Tyr 305 310 315 320 Tyr Val Asn Lys Gln Glu Gly Lys Ser Leu Tyr Val Lys Gly Glu Pro 325 330 335 Ile Ile Asn Phe Tyr Asp Pro Leu Val Phe Pro Ser Asp Glu Phe Asp 340 345 350 Ala Ser Ile Ser Gln Val Asn Glu Lys Ile Asn Gln Ser Leu Ala Phe 355 360 365 Ile Arg Lys Ser Asp Glu Leu Leu His Asn Val Asn Ala Gly Lys Ser 370 375 380 Thr Thr Asn Ile Met Ile Thr Thr Ile Ile Ile Val Ile Ile Val Ile 385 390 395 400 Leu Leu Ser Leu Ile Ala Val Gly Leu Leu Leu Tyr Cys Lys Ala Arg 405 410 415 Ser Thr Pro Val Thr Leu Ser Lys Asp Gln Leu Ser Gly Ile Asn Asn 420 425 430 Ile Ala Phe Ser Asn 435 328 amino acids amino acid unknown protein 92 Phe Leu Gly Phe Leu Gly Ala Ala Gly Thr Ala Met Gly Ala Ala Ala 1 5 10 15 Thr Ala Leu Thr Val Gln Ser Gln His Leu Leu Ala Gly Ile Leu Gln 20 25 30 Gln Gln Lys Asn Leu Leu Ala Ala Val Glu Ala Gln Gln Gln Met Leu 35 40 45 Lys Leu Thr Ile Trp Gly Val Lys Asn Leu Asn Ala Arg Val Thr Ala 50 55 60 Leu Glu Lys Tyr Leu Glu Asp Gln Ala Arg Leu Asn Ala Trp Gly Cys 65 70 75 80 Ala Trp Lys Gln Val Cys His Thr Thr Val Pro Trp Gln Trp Asn Asn 85 90 95 Arg Thr Pro Asp Trp Asn Asn Met Thr Trp Leu Glu Trp Glu Arg Gln 100 105 110 Ile Ser Tyr Leu Glu Gly Asn Ile Thr Thr Gln Leu Glu Glu Ala Arg 115 120 125 Ala Gln Glu Glu Lys Asn Leu Asp Ala Tyr Gln Lys Leu Ser Ser Trp 130 135 140 Ser Asp Phe Trp Ser Trp Phe Asp Phe Ser Lys Trp Leu Asn Ile Leu 145 150 155 160 Lys Ile Gly Phe Leu Asp Val Leu Gly Ile Ile Gly Leu Arg Leu Leu 165 170 175 Tyr Thr Val Tyr Ser Cys Ile Ala Arg Val Arg Gln Gly Tyr Ser Pro 180 185 190 Leu Ser Pro Gln Ile His Ile His Pro Trp Lys Gly Gln Pro Asp Asn 195 200 205 Ala Glu Gly Pro Gly Glu Gly Gly Asp Lys Arg Lys Asn Ser Ser Glu 210 215 220 Pro Trp Gln Lys Glu Ser Gly Thr Ala Glu Trp Lys Ser Asn Trp Cys 225 230 235 240 Lys Arg Leu Thr Asn Trp Cys Ser Ile Ser Ser Ile Trp Leu Tyr Asn 245 250 255 Ser Cys Leu Thr Leu Leu Val His Leu Arg Ser Ala Phe Gln Tyr Ile 260 265 270 Gln Tyr Gly Leu Gly Glu Leu Lys Ala Ala Ala Gln Glu Ala Val Val 275 280 285 Ala Leu Ala Arg Leu Ala Gln Asn Ala Gly Tyr Gln Ile Trp Leu Ala 290 295 300 Cys Arg Ser Ala Tyr Arg Ala Ile Ile Asn Ser Pro Arg Arg Val Arg 305 310 315 320 Gln Gly Leu Glu Gly Ile Leu Asn 325 438 amino acids amino acid unknown protein 93 Phe Ala Gly Val Val Leu Ala Gly Val Ala Leu Gly Val Ala Thr Ala 1 5 10 15 Ala Gln Ile Thr Ala Gly Ile Ala Leu His Gln Ser Asn Leu Asn Ala 20 25 30 Gln Ala Ile Gln Ser Leu Arg Thr Ser Leu Glu Gln Ser Asn Lys Ala 35 40 45 Ile Glu Glu Ile Arg Glu Ala Thr Gln Glu Thr Val Ile Ala Val Gln 50 55 60 Gly Val Gln Asp Tyr Val Asn Asn Glu Leu Val Pro Ala Met Gln His 65 70 75 80 Met Ser Cys Glu Leu Val Gly Gln Arg Leu Gly Leu Arg Leu Leu Arg 85 90 95 Tyr Tyr Thr Glu Leu Leu Ser Ile Phe Gly Pro Ser Leu Arg Asp Pro 100 105 110 Ile Ser Ala Glu Ile Ser Ile Gln Ala Leu Ile Tyr Ala Leu Gly Gly 115 120 125 Glu Ile His Lys Ile Leu Glu Lys Leu Gly Tyr Ser Gly Ser Asp Met 130 135 140 Ile Ala Ile Leu Glu Ser Arg Gly Ile Lys Thr Lys Ile Thr His Val 145 150 155 160 Asp Leu Pro Gly Lys Phe Ile Ile Leu Ser Ile Ser Tyr Pro Thr Leu 165 170 175 Ser Glu Val Lys Gly Val Ile Val His Arg Leu Glu Ala Val Ser Tyr 180 185 190 Asn Ile Gly Ser Gln Glu Trp Tyr Thr Thr Val Pro Arg Tyr Ile Ala 195 200 205 Thr Asn Gly Tyr Leu Ile Ser Asn Phe Asp Glu Ser Ser Cys Val Phe 210 215 220 Val Ser Glu Ser Ala Ile Cys Ser Gln Asn Ser Leu Tyr Pro Met Ser 225 230 235 240 Pro Leu Leu Gln Gln Cys Ile Arg Gly Asp Thr Ser Ser Cys Ala Arg 245 250 255 Thr Leu Val Ser Gly Thr Met Gly Asn Lys Phe Ile Leu Ser Lys Gly 260 265 270 Asn Ile Val Ala Asn Cys Ala Ser Ile Leu Cys Lys Cys Tyr Ser Thr 275 280 285 Ser Thr Ile Ile Asn Gln Ser Pro Asp Lys Leu Leu Thr Phe Ile Ala 290 295 300 Ser Asp Thr Cys Pro Leu Val Glu Ile Asp Gly Ala Thr Ile Gln Val 305 310 315 320 Gly Gly Arg Gln Tyr Pro Asp Met Val Tyr Glu Gly Lys Val Ala Leu 325 330 335 Gly Pro Ala Ile Ser Leu Asp Arg Leu Asp Val Gly Thr Asn Leu Gly 340 345 350 Asn Ala Leu Lys Lys Leu Asp Asp Ala Lys Val Leu Ile Asp Ser Ser 355 360 365 Asn Gln Ile Leu Glu Thr Val Arg Arg Ser Ser Phe Asn Phe Gly Ser 370 375 380 Leu Leu Ser Val Pro Ile Leu Ser Cys Thr Ala Leu Ala Leu Leu Leu 385 390 395 400 Leu Ile Tyr Cys Cys Lys Arg Arg Tyr Gln Gln Thr Leu Lys Gln His 405 410 415 Thr Lys Val Asp Pro Ala Phe Lys Pro Asp Leu Thr Gly Thr Ser Lys 420 425 430 Ser Tyr Val Arg Ser Leu 435 436 amino acids amino acid unknown protein 94 Phe Ile Gly Ala Ile Ile Gly Ser Val Ala Leu Gly Val Ala Thr Ala 1 5 10 15 Ala Gln Ile Thr Ala Ala Ser Ala Leu Ile Gln Ala Asn Gln Asn Ala 20 25 30 Ala Asn Ile Leu Arg Leu Lys Glu Ser Ile Thr Ala Thr Ile Glu Ala 35 40 45 Val His Glu Val Thr Asp Gly Leu Ser Gln Leu Ala Val Ala Val Gly 50 55 60 Lys Met Gln Gln Phe Val Asn Asp Gln Phe Asn Asn Thr Ala Gln Glu 65 70 75 80 Leu Asp Cys Ile Lys Ile Thr Gln Gln Val Gly Val Glu Leu Asn Leu 85 90 95 Tyr Leu Thr Glu Leu Thr Thr Val Phe Gly Pro Gln Ile Thr Ser Pro 100 105 110 Ala Leu Thr Gln Leu Thr Ile Gln Ala Leu Tyr Asn Ala Gly Gly Asn 115 120 125 Met Asp Tyr Leu Leu Thr Lys Leu Gly Val Gly Asn Asn Gln Leu Ser 130 135 140 Ser Leu Ile Gly Ser Gly Leu Ile Thr Gly Asn Pro Ile Leu Tyr Asp 145 150 155 160 Ser Gln Thr Gln Leu Leu Gly Ile Gln Val Thr Leu Pro Ser Val Gly 165 170 175 Asn Leu Asn Asn Met Arg Ala Thr Tyr Leu Glu Thr Leu Ser Val Ser 180 185 190 Thr Thr Lys Gly Phe Ala Ser Ala Leu Val Pro Lys Val Val Thr Gln 195 200 205 Val Gly Ser Val Ile Glu Glu Leu Asp Thr Ser Tyr Cys Ile Glu Thr 210 215 220 Asp Leu Asp Leu Tyr Cys Thr Arg Ile Val Thr Phe Pro Met Ser Pro 225 230 235 240 Gly Ile Tyr Ser Cys Leu Asn Gly Asn Thr Ser Ala Cys Met Tyr Ser 245 250 255 Lys Thr Glu Gly Ala Leu Thr Thr Pro Tyr Met Thr Leu Lys Gly Ser 260 265 270 Val Ile Ala Asn Cys Lys Met Thr Thr Cys Arg Cys Ala Asp Pro Pro 275 280 285 Gly Ile Ile Ser Gln Asn Tyr Gly Glu Ala Val Ser Leu Ile Asp Arg 290 295 300 His Ser Cys Asn Val Leu Ser Leu Asp Gly Ile Thr Leu Arg Leu Ser 305 310 315 320 Gly Glu Phe Asp Ala Thr Tyr Gln Lys Asn Ile Ser Ile Leu Asp Ser 325 330 335 Gln Val Ile Val Thr Gly Asn Leu Asp Ile Ser Thr Glu Leu Gly Asn 340 345 350 Val Asn Asn Ser Ile Ser Asn Ala Leu Asp Lys Leu Glu Glu Ser Asn 355 360 365 Ser Lys Leu Asp Lys Val Asn Val Lys Leu Thr Ser Thr Ser Ala Leu 370 375 380 Ile Thr Tyr Ile Ala Leu Thr Ala Ile Ser Leu Val Cys Gly Ile Leu 385 390 395 400 Ser Leu Val Leu Ala Cys Tyr Leu Met Tyr Lys Gln Lys Ala Gln Gln 405 410 415 Lys Thr Leu Leu Trp Leu Gly Asn Asn Thr Leu Gly Gln Met Arg Ala 420 425 430 Thr Thr Lys Met 435 430 amino acids amino acid unknown protein 95 Phe Phe Gly Gly Val Ile Gly Thr Ile Ala Leu Gly Val Ala Thr Ser 1 5 10 15 Ala Gln Ile Thr Ala Ala Val Ala Leu Val Glu Ala Lys Gln Ala Arg 20 25 30 Ser Asp Ile Glu Lys Leu Lys Glu Ala Ile Arg Asp Thr Asn Lys Ala 35 40 45 Val Gln Ser Val Gln Ser Ser Ile Gly Asn Leu Ile Val Ala Ile Lys 50 55 60 Ser Val Gln Asp Tyr Val Asn Lys Glu Ile Val Pro Ser Ile Ala Arg 65 70 75 80 Leu Gly Cys Glu Ala Ala Gly Leu Gln Leu Gly Ile Ala Leu Thr Gln 85 90 95 His Tyr Ser Glu Leu Thr Asn Ile Phe Gly Asp Asn Ile Gly Ser Leu 100 105 110 Gln Glu Lys Gly Ile Lys Leu Gln Gly Ile Ala Ser Leu Tyr Arg Thr 115 120 125 Asn Ile Thr Glu Ile Phe Thr Thr Ser Thr Val Asp Lys Tyr Asp Ile 130 135 140 Tyr Asp Leu Leu Phe Thr Glu Ser Ile Lys Val Arg Val Ile Asp Val 145 150 155 160 Asp Leu Asn Asp Tyr Ser Ile Thr Leu Gln Val Arg Leu Pro Leu Leu 165 170 175 Thr Arg Leu Leu Asn Thr Gln Ile Tyr Arg Val Asp Ser Ile Ser Tyr 180 185 190 Asn Ile Gln Asn Arg Glu Trp Tyr Ile Pro Leu Pro Ser His Ile Met 195 200 205 Thr Lys Gly Ala Phe Leu Gly Gly Ala Asp Val Lys Glu Cys Ile Glu 210 215 220 Ala Phe Ser Ser Tyr Ile Cys Pro Ser Asp Pro Gly Phe Val Leu Asn 225 230 235 240 His Glu Met Glu Ser Cys Leu Ser Gly Asn Ile Ser Gln Cys Pro Arg 245 250 255 Thr Val Val Lys Ser Asp Ile Val Pro Arg Tyr Ala Phe Val Asn Gly 260 265 270 Gly Val Val Ala Asn Cys Ile Thr Thr Thr Cys Thr Cys Asn Gly Ile 275 280 285 Gly Asn Arg Ile Asn Gln Pro Pro Asp Gln Gly Val Lys Ile Ile Thr 290 295 300 His Lys Glu Cys Asn Thr Ile Gly Ile Asn Gly Met Leu Phe Asn Thr 305 310 315 320 Asn Lys Glu Gly Thr Leu Ala Phe Tyr Thr Pro Asn Asp Ile Thr Leu 325 330 335 Asn Asn Ser Val Ala Leu Asp Pro Ile Asp Ile Ser Ile Glu Leu Asn 340 345 350 Lys Ala Lys Ser Asp Leu Glu Glu Ser Lys Glu Trp Ile Arg Arg Ser 355 360 365 Asn Gln Lys Leu Asp Ser Ile Gly Asn Trp His Gln Ser Ser Thr Thr 370 375 380 Ile Ile Ile Val Leu Ile Met Ile Ile Ile Leu Phe Ile Ile Asn Val 385 390 395 400 Thr Ile Ile Ile Ile Ala Val Lys Tyr Tyr Arg Ile Gln Lys Arg Asn 405 410 415 Arg Val Asp Gln Asn Asp Lys Pro Tyr Val Leu Thr Asn Lys 420 425 430 221 amino acids amino acid unknown protein 96 Gly Leu Phe Gly Ala Ile Ala Gly Phe Ile Glu Asn Gly Trp Glu Gly 1 5 10 15 Met Ile Asp Gly Trp Tyr Gly Phe Arg His Gln Asn Ser Glu Gly Thr 20 25 30 Gly Gln Ala Ala Asp Leu Lys Ser Thr Gln Ala Ala Ile Asp Gln Ile 35 40 45 Asn Gly Lys Leu Asn Arg Val Ile Glu Lys Thr Asn Glu Lys Phe His 50 55 60 Gln Ile Glu Lys Glu Phe Ser Glu Val Glu Gly Arg Ile Gln Asp Leu 65 70 75 80 Glu Lys Tyr Val Glu Asp Thr Lys Ile Asp Leu Trp Ser Tyr Asn Ala 85 90 95 Glu Leu Leu Val Ala Leu Glu Asn Gln His Thr Ile Asp Leu Thr Asp 100 105 110 Ser Glu Met Asn Lys Leu Phe Glu Lys Thr Arg Arg Gln Leu Arg Glu 115 120 125 Asn Ala Glu Glu Met Gly Asn Gly Cys Phe Lys Ile Tyr His Lys Cys 130 135 140 Asp Asn Ala Cys Ile Glu Ser Ile Arg Asn Gly Thr Tyr Asp His Asp 145 150 155 160 Val Tyr Arg Asp Glu Ala Leu Asn Asn Arg Phe Gln Ile Lys Gly Val 165 170 175 Glu Leu Lys Ser Gly Tyr Lys Asp Trp Ile Leu Trp Ile Ser Phe Ala 180 185 190 Ile Ser Cys Phe Leu Leu Cys Val Val Leu Leu Gly Phe Ile Met Trp 195 200 205 Ala Cys Gln Arg Gly Asn Ile Arg Cys Asn Ile Cys Ile 210 215 220 46 amino acids amino acid unknown peptide 97 Tyr Thr Ser Val Ile Thr Ile Glu Leu Ser Asn Ile Lys Glu Asn Lys 1 5 10 15 Cys Asn Gly Ala Lys Val Lys Leu Ile Lys Gln Glu Leu Asp Lys Tyr 20 25 30 Lys Asn Ala Val Thr Glu Leu Gln Leu Leu Met Gln Ser Thr 35 40 45 54 amino acids amino acid unknown peptide 98 Ala Ser Gly Val Ala Val Ser Lys Val Leu His Leu Glu Gly Glu Val 1 5 10 15 Asn Lys Ile Ala Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser 20 25 30 Asn Gly Val Ser Val Leu Thr Ser Lys Val Leu Asp Leu Lys Asn Tyr 35 40 45 Ile Asp Lys Gln Leu Leu 50 53 amino acids amino acid unknown peptide 99 Gly Glu Pro Ile Ile Asn Phe Tyr Asp Pro Leu Val Phe Pro Ser Asp 1 5 10 15 Glu Phe Asp Ala Ser Ile Ser Gln Val Asn Glu Lys Ile Asn Gln Ser 20 25 30 Leu Ala Phe Ile Arg Lys Ser Asp Glu Leu Leu His Asn Val Asn Ala 35 40 45 Gly Lys Ser Thr Thr 50 70 amino acids amino acid unknown peptide 100 Gly Thr Ile Ala Leu Gly Val Ala Thr Ser Ala Gln Ile Thr Ala Ala 1 5 10 15 Val Ala Leu Val Glu Ala Lys Gln Ala Arg Ser Asp Ile Glu Lys Leu 20 25 30 Lys Glu Ala Ile Arg Asp Thr Asn Lys Ala Val Gln Ser Val Gln Ser 35 40 45 Ser Ile Gly Asn Leu Ile Val Ala Ile Lys Ser Val Gln Asp Tyr Val 50 55 60 Asn Lys Glu Ile Val Pro 65 70 56 amino acids amino acid unknown peptide 101 Tyr Thr Pro Asn Asp Ile Thr Leu Asn Asn Ser Val Ala Leu Asp Pro 1 5 10 15 Ile Asp Ile Ser Ile Glu Leu Asn Lys Ala Lys Ser Asp Leu Glu Glu 20 25 30 Ser Lys Glu Trp Ile Arg Arg Ser Asn Gln Lys Leu Asp Ser Ile Gly 35 40 45 Asn Trp His Gln Ser Ser Thr Thr 50 55 249 amino acids amino acid unknown protein 102 Arg Asn Lys Arg Gly Val Phe Val Leu Gly Phe Leu Gly Phe Leu Ala 1 5 10 15 Thr Ala Gly Ser Ala Met Gly Ala Ala Ser Xaa Xaa Xaa Xaa Ala Gln 20 25 30 Ser Arg Thr Leu Leu Ala Gly Ile Val Gln Gln Gln Gln Gln Leu Leu 35 40 45 Asp Val Val Lys Arg Gln Gln Glu Leu Leu Arg Leu Thr Val Trp Gly 50 55 60 Thr Lys Asn Leu Gln Thr Arg Val Thr Ala Ile Glu Lys Tyr Leu Lys 65 70 75 80 Asp Gln Ala Gln Leu Asn Ala Trp Gly Cys Ala Phe Arg Gln Val Cys 85 90 95 His Thr Thr Val Pro Trp Pro Asn Ala Ser Leu Thr Pro Asp Trp Asn 100 105 110 Asn Asp Thr Trp Gln Glu Trp Glu Arg Lys Val Asp Phe Leu Glu Glu 115 120 125 Asn Ile Thr Ala Leu Leu Glu Glu Ala Gln Ile Gln Gln Glu Lys Asn 130 135 140 Met Tyr Glu Leu Gln Lys Leu Asn Ser Trp Asp Val Phe Gly Asn Xaa 145 150 155 160 Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa 165 170 175 Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Ile Tyr Ile Val Met Leu 180 185 190 Ala Lys Leu Arg Gln Gly Tyr Arg Pro Val Phe Ser Ser Pro Pro Ser 195 200 205 Tyr Phe Gln Xaa Thr His Thr Gln Gln Asp Pro Ala Leu Pro Thr Arg 210 215 220 Glu Gly Lys Glu Gly Asp Gly Gly Glu Gly Gly Gly Asn Ser Ser Trp 225 230 235 240 Pro Trp Gln Ile Glu Tyr Ile His Phe 245 856 amino acids amino acid unknown protein 103 Met Thr Arg Arg Arg Val Leu Ser Val Val Val Leu Leu Ala Ala Leu 1 5 10 15 Ala Cys Arg Leu Gly Ala Gln Thr Pro Glu Gln Pro Ala Pro Pro Ala 20 25 30 Thr Thr Val Gln Pro Thr Ala Thr Arg Gln Gln Thr Ser Phe Pro Phe 35 40 45 Arg Val Cys Glu Leu Ser Ser His Gly Asp Leu Phe Arg Phe Ser Ser 50 55 60 Asp Ile Gln Cys Pro Ser Phe Gly Thr Arg Glu Asn His Thr Glu Gly 65 70 75 80 Leu Leu Met Val Phe Lys Asp Asn Ile Ile Pro Tyr Ser Phe Lys Val 85 90 95 Arg Ser Tyr Thr Lys Ile Val Thr Asn Ile Leu Ile Tyr Asn Gly Trp 100 105 110 Tyr Ala Asp Ser Val Thr Asn Arg His Glu Glu Lys Phe Ser Val Asp 115 120 125 Ser Tyr Glu Thr Asp Gln Met Asp Thr Ile Tyr Gln Cys Tyr Asn Ala 130 135 140 Val Lys Met Thr Lys Asp Gly Leu Thr Arg Val Tyr Val Asp Arg Asp 145 150 155 160 Gly Val Asn Ile Thr Val Asn Leu Lys Pro Thr Gly Gly Leu Ala Asn 165 170 175 Gly Val Arg Arg Tyr Ala Ser Gln Thr Glu Leu Tyr Asp Ala Pro Gly 180 185 190 Trp Leu Ile Trp Thr Tyr Arg Thr Arg Thr Thr Val Asn Cys Leu Ile 195 200 205 Thr Asp Met Met Ala Lys Ser Asn Ser Pro Phe Asp Phe Phe Val Thr 210 215 220 Thr Thr Gly Gln Thr Val Glu Met Ser Pro Phe Tyr Asp Gly Lys Asn 225 230 235 240 Lys Glu Thr Phe His Glu Arg Ala Asp Ser Phe His Val Arg Thr Asn 245 250 255 Tyr Lys Ile Val Asp Tyr Asp Asn Arg Gly Thr Asn Pro Gln Gly Glu 260 265 270 Arg Arg Ala Phe Leu Asp Lys Gly Thr Tyr Thr Leu Ser Trp Lys Leu 275 280 285 Glu Asn Arg Thr Ala Tyr Cys Pro Leu Gln His Trp Gln Thr Phe Asp 290 295 300 Ser Thr Ile Ala Thr Glu Thr Gly Lys Ser Ile His Phe Val Thr Asp 305 310 315 320 Glu Gly Thr Ser Ser Phe Val Thr Asn Thr Thr Val Gly Ile Glu Leu 325 330 335 Pro Asp Ala Phe Lys Cys Ile Glu Glu Gln Val Asn Lys Thr His Glu 340 345 350 Lys Tyr Glu Ala Val Gln Asp Arg Tyr Thr Lys Gly Gln Glu Ala Ile 355 360 365 Thr Tyr Phe Ile Thr Ser Gly Gly Leu Leu Leu Ala Trp Leu Pro Leu 370 375 380 Thr Pro Arg Ser Leu Ala Thr Val Lys Asn Leu Thr Glu Leu Thr Thr 385 390 395 400 Pro Thr Ser Ser Pro Pro Ser Ser Pro Ser Pro Pro Ala Pro Ser Ala 405 410 415 Ala Arg Gly Ser Thr Pro Ala Ala Val Leu Arg Arg Arg Arg Arg Asp 420 425 430 Ala Gly Asn Ala Thr Thr Pro Val Pro Pro Thr Ala Pro Gly Lys Ser 435 440 445 Leu Gly Thr Leu Asn Asn Pro Ala Thr Val Gln Ile Gln Phe Ala Tyr 450 455 460 Asp Ser Leu Arg Arg Gln Ile Asn Arg Met Leu Gly Asp Leu Ala Arg 465 470 475 480 Ala Trp Cys Leu Glu Gln Lys Arg Gln Asn Met Val Leu Arg Glu Leu 485 490 495 Thr Lys Ile Asn Pro Thr Thr Val Met Ser Ser Ile Tyr Gly Lys Ala 500 505 510 Val Ala Ala Lys Arg Leu Gly Asp Val Ile Ser Val Ser Gln Cys Val 515 520 525 Pro Val Asn Gln Ala Thr Val Thr Leu Arg Lys Ser Met Arg Val Pro 530 535 540 Gly Ser Glu Thr Met Cys Tyr Ser Arg Pro Leu Val Ser Phe Ser Phe 545 550 555 560 Ile Asn Asp Thr Lys Thr Tyr Glu Gly Gln Leu Gly Thr Asp Asn Glu 565 570 575 Ile Phe Leu Thr Lys Lys Met Thr Glu Val Cys Gln Ala Thr Ser Gln 580 585 590 Tyr Tyr Phe Gln Ser Gly Asn Glu Ile His Val Tyr Asn Asp Tyr His 595 600 605 His Phe Lys Thr Ile Glu Leu Asp Gly Ile Ala Thr Leu Gln Thr Phe 610 615 620 Ile Ser Leu Asn Thr Ser Leu Ile Glu Asn Ile Asp Phe Ala Ser Leu 625 630 635 640 Glu Leu Tyr Ser Arg Asp Glu Gln Arg Ala Ser Asn Val Phe Asp Leu 645 650 655 Glu Gly Ile Phe Arg Glu Tyr Asn Phe Gln Ala Gln Asn Ile Ala Gly 660 665 670 Leu Arg Lys Asp Leu Asp Asn Ala Val Ser Asn Gly Arg Asn Gln Phe 675 680 685 Val Asp Gly Leu Gly Glu Leu Met Asp Ser Leu Gly Ser Val Gly Gln 690 695 700 Ser Ile Thr Asn Leu Val Ser Thr Val Gly Gly Leu Phe Ser Ser Leu 705 710 715 720 Val Ser Gly Phe Ile Ser Phe Phe Lys Asn Pro Phe Gly Gly Met Leu 725 730 735 Ile Leu Val Leu Val Ala Gly Val Val Ile Leu Val Ile Ser Leu Thr 740 745 750 Arg Arg Thr Arg Gln Met Ser Gln Gln Pro Val Gln Met Leu Tyr Pro 755 760 765 Gly Ile Asp Glu Leu Ala Gln Gln His Ala Ser Gly Glu Gly Pro Gly 770 775 780 Ile Asn Pro Ile Ser Lys Thr Glu Leu Gln Ala Ile Met Leu Ala Leu 785 790 795 800 His Glu Gln Asn Gln Glu Gln Lys Arg Ala Ala Gln Arg Ala Ala Gly 805 810 815 Pro Ser Val Ala Ser Arg Ala Leu Gln Ala Ala Arg Asp Arg Phe Pro 820 825 830 Gly Leu Arg Arg Arg Arg Tyr His Asp Pro Glu Thr Ala Ala Ala Leu 835 840 845 Leu Gly Glu Ala Glu Thr Glu Phe 850 855 245 amino acids amino acid unknown protein 104 Met Met Asp Pro Asn Ser Thr Ser Glu Asp Val Lys Phe Thr Pro Asp 1 5 10 15 Pro Tyr Gln Val Pro Phe Val Gln Ala Phe Asp Gln Ala Thr Arg Val 20 25 30 Tyr Gln Asp Leu Gly Gly Pro Ser Gln Ala Pro Leu Pro Cys Val Leu 35 40 45 Trp Pro Val Leu Pro Glu Pro Leu Pro Gln Gly Gln Leu Thr Ala Tyr 50 55 60 His Val Ser Thr Ala Pro Thr Gly Ser Trp Phe Ser Ala Pro Gln Pro 65 70 75 80 Ala Pro Glu Asn Ala Tyr Gln Ala Tyr Ala Ala Pro Gln Leu Phe Pro 85 90 95 Val Ser Asp Ile Thr Gln Asn Gln Gln Thr Asn Gln Ala Gly Gly Glu 100 105 110 Ala Pro Gln Pro Gly Asp Asn Ser Thr Val Gln Thr Ala Ala Ala Val 115 120 125 Val Phe Ala Cys Pro Gly Ala Asn Gln Gly Gln Gln Leu Ala Asp Ile 130 135 140 Gly Val Pro Gln Pro Ala Pro Val Ala Ala Pro Ala Arg Arg Thr Arg 145 150 155 160 Lys Pro Gln Gln Pro Glu Ser Leu Glu Glu Cys Asp Ser Glu Leu Glu 165 170 175 Ile Lys Arg Tyr Lys Asn Arg Val Ala Ser Arg Lys Cys Arg Ala Lys 180 185 190 Phe Lys Gln Leu Leu Gln His Tyr Arg Glu Val Ala Ala Ala Lys Ser 195 200 205 Ser Glu Asn Asp Arg Leu Arg Leu Leu Leu Lys Gln Met Cys Pro Ser 210 215 220 Leu Asp Val Asp Ser Ile Ile Pro Arg Thr Pro Asp Val Leu His Glu 225 230 235 240 Asp Leu Leu Asn Phe 245 438 amino acids amino acid unknown protein 105 Phe Ala Gly Val Val Leu Ala Gly Ala Ala Leu Gly Val Ala Thr Ala 1 5 10 15 Ala Gln Ile Thr Ala Gly Ile Ala Leu His Gln Ser Met Leu Asn Ser 20 25 30 Gln Ala Ile Asp Asn Leu Arg Ala Ser Leu Glu Thr Thr Asn Gln Ala 35 40 45 Ile Glu Ala Ile Arg Gln Ala Gly Gln Glu Met Ile Leu Ala Val Gln 50 55 60 Gly Val Gln Asp Tyr Ile Asn Asn Glu Leu Ile Pro Ser Met Asn Gln 65 70 75 80 Leu Ser Cys Asp Leu Ile Gly Gln Lys Leu Gly Leu Lys Leu Leu Arg 85 90 95 Tyr Tyr Thr Glu Ile Leu Ser Leu Phe Gly Pro Ser Leu Arg Asp Pro 100 105 110 Ile Ser Ala Glu Ile Ser Ile Gln Ala Leu Ser Tyr Ala Leu Gly Gly 115 120 125 Asp Ile Asn Lys Val Leu Glu Lys Leu Gly Tyr Ser Gly Gly Asp Leu 130 135 140 Leu Gly Ile Leu Glu Ser Arg Gly Ile Lys Ala Arg Ile Thr His Val 145 150 155 160 Asp Thr Glu Ser Tyr Phe Ile Val Leu Ser Ile Ala Tyr Pro Thr Leu 165 170 175 Ser Glu Ile Lys Gly Val Ile Val His Arg Leu Glu Gly Val Ser Tyr 180 185 190 Asn Ile Gly Ser Gln Glu Trp Tyr Thr Thr Val Pro Lys Tyr Val Ala 195 200 205 Thr Gln Gly Tyr Leu Ile Ser Asn Phe Asp Glu Ser Ser Cys Thr Phe 210 215 220 Met Pro Glu Gly Thr Val Cys Ser Gln Asn Ala Leu Tyr Pro Met Ser 225 230 235 240 Pro Leu Leu Gln Glu Cys Leu Arg Gly Ser Thr Lys Ser Cys Ala Arg 245 250 255 Thr Leu Val Ser Gly Ser Phe Gly Asn Arg Phe Ile Leu Ser Gln Gly 260 265 270 Asn Leu Ile Ala Asn Cys Ala Ser Ile Leu Cys Lys Cys Tyr Thr Thr 275 280 285 Gly Thr Ile Ile Asn Gln Asp Pro Asp Lys Ile Leu Thr Tyr Ile Ala 290 295 300 Ala Asp His Cys Pro Val Val Glu Val Asn Gly Val Thr Ile Gln Val 305 310 315 320 Gly Ser Arg Arg Tyr Pro Asp Ala Val Tyr Leu His Arg Ile Asp Leu 325 330 335 Gly Pro Pro Ile Ser Leu Glu Arg Leu Asp Val Gly Thr Asn Leu Gly 340 345 350 Asn Ala Ile Ala Lys Leu Glu Asp Ala Lys Glu Leu Leu Glu Ser Ser 355 360 365 Asp Gln Ile Leu Arg Ser Met Lys Gly Leu Ser Ser Thr Ser Ile Val 370 375 380 Tyr Ile Leu Ile Ala Val Cys Leu Gly Gly Leu Ile Gly Ile Pro Ala 385 390 395 400 Leu Ile Cys Cys Cys Arg Gly Arg Cys Asn Lys Lys Gly Glu Gln Val 405 410 415 Gly Met Ser Arg Pro Gly Leu Lys Pro Asp Leu Thr Gly Thr Ser Lys 420 425 430 Ser Tyr Val Arg Ser Leu 435 389 amino acids amino acid unknown protein 106 Met Gly Gln Asn Leu Ser Thr Ser Asn Pro Leu Gly Phe Phe Pro Asp 1 5 10 15 His Gln Leu Asp Pro Ala Phe Arg Ala Asn Thr Ala Asn Pro Asp Trp 20 25 30 Asp Phe Asn Pro Asn Lys Asp Thr Trp Pro Asp Ala Asn Lys Val Gly 35 40 45 Ala Gly Ala Phe Gly Leu Gly Phe Thr Pro Pro His Gly Gly Leu Leu 50 55 60 Gly Trp Ser Pro Gln Ala Gln Gly Ile Leu Gln Thr Leu Pro Ala Asn 65 70 75 80 Pro Pro Pro Ala Ser Thr Asn Arg Gln Ser Gly Arg Gln Pro Thr Pro 85 90 95 Leu Ser Pro Pro Leu Arg Asn Thr His Pro Gln Ala Met Gln Trp Asn 100 105 110 Ser Thr Thr Phe His Gln Thr Leu Gln Asp Pro Arg Val Arg Gly Leu 115 120 125 Tyr Phe Pro Ala Gly Gly Ser Ser Ser Gly Thr Val Asn Pro Val Leu 130 135 140 Thr Thr Ala Ser Pro Leu Ser Ser Ile Phe Ser Arg Ile Gly Asp Pro 145 150 155 160 Ala Leu Asn Met Glu Asn Ile Thr Ser Gly Phe Leu Gly Pro Leu Leu 165 170 175 Val Leu Gln Ala Gly Phe Phe Leu Leu Thr Arg Ile Leu Thr Ile Pro 180 185 190 Gln Ser Leu Asp Ser Trp Trp Thr Ser Leu Asn Phe Leu Gly Gly Thr 195 200 205 Thr Val Cys Leu Gly Gln Asn Ser Gln Ser Pro Thr Ser Asn His Ser 210 215 220 Pro Thr Ser Cys Pro Pro Thr Cys Pro Gly Tyr Arg Trp Met Cys Leu 225 230 235 240 Arg Arg Phe Ile Ile Phe Leu Phe Ile Leu Leu Leu Cys Leu Ile Phe 245 250 255 Leu Leu Val Leu Leu Asp Tyr Gln Gly Met Leu Pro Val Cys Pro Leu 260 265 270 Ile Pro Gly Ser Ser Thr Thr Ser Thr Gly Pro Cys Arg Thr Cys Met 275 280 285 Thr Thr Ala Gln Gly Thr Ser Met Tyr Pro Ser Cys Cys Cys Thr Lys 290 295 300 Pro Ser Asp Gly Asn Cys Thr Cys Ile Pro Ile Pro Ser Ser Trp Ala 305 310 315 320 Phe Gly Lys Phe Leu Trp Glu Trp Ala Ser Ala Arg Phe Ser Trp Leu 325 330 335 Ser Leu Leu Val Pro Phe Val Gln Trp Phe Val Gly Leu Ser Pro Thr 340 345 350 Val Trp Leu Ser Val Ile Trp Met Met Trp Tyr Trp Gly Pro Ser Leu 355 360 365 Tyr Ser Ile Leu Ser Pro Phe Leu Pro Leu Leu Pro Ile Phe Phe Cys 370 375 380 Leu Trp Val Tyr Ile 385 192 amino acids amino acid unknown protein 107 Ala Ile Gln Leu Ile Pro Leu Phe Val Gly Leu Gly Ile Thr Thr Ala 1 5 10 15 Val Ser Thr Gly Ala Ala Gly Leu Gly Val Ser Ile Thr Gln Tyr Thr 20 25 30 Lys Leu Ser His Gln Leu Ile Ser Asp Val Gln Ala Ile Ser Ser Thr 35 40 45 Ile Gln Asp Leu Gln Asp Gln Val Asp Ser Leu Ala Glu Val Val Leu 50 55 60 Gln Asn Arg Arg Gly Leu Asp Leu Leu Thr Ala Glu Gln Gly Gly Ile 65 70 75 80 Cys Leu Ala Leu Gln Glu Lys Cys Cys Phe Tyr Ala Asn Lys Ser Gly 85 90 95 Ile Val Arg Asp Lys Ile Lys Asn Leu Gln Asp Asp Leu Glu Arg Arg 100 105 110 Arg Arg Gln Leu Ile Asp Asn Pro Phe Trp Thr Ser Phe His Gly Phe 115 120 125 Leu Pro Tyr Val Met Pro Leu Leu Gly Pro Leu Leu Cys Leu Leu Leu 130 135 140 Val Leu Ser Phe Gly Pro Ile Ile Phe Asn Lys Leu Met Thr Phe Ile 145 150 155 160 Lys His Gln Ile Glu Ser Ile Gln Ala Lys Pro Ile Gln Val His Tyr 165 170 175 His Arg Leu Glu Gln Glu Asp Ser Gly Gly Ser Tyr Leu Thr Leu Thr 180 185 190 154 amino acids amino acid unknown protein 108 Met Lys Ala Gln Lys Gly Phe Thr Leu Ile Glu Leu Met Ile Val Val 1 5 10 15 Ala Ile Ile Gly Ile Leu Ala Ala Ile Ala Ile Pro Gln Tyr Gln Asp 20 25 30 Tyr Thr Ala Arg Thr Gln Val Thr Arg Ala Val Ser Glu Val Ser Ala 35 40 45 Leu Lys Thr Ala Ala Glu Ser Ala Ile Leu Glu Gly Lys Glu Ile Val 50 55 60 Ser Ser Ala Thr Pro Lys Asp Thr Gln Tyr Asp Ile Gly Phe Thr Glu 65 70 75 80 Ser Thr Leu Leu Asp Gly Ser Gly Lys Ser Gln Ile Gln Val Thr Asp 85 90 95 Asn Gln Asp Gly Thr Val Glu Leu Val Ala Thr Leu Gly Lys Ser Ser 100 105 110 Gly Ser Ala Ile Lys Gly Ala Val Ile Thr Val Ser Arg Lys Asn Asp 115 120 125 Gly Val Trp Asn Cys Lys Ile Thr Lys Thr Pro Thr Ala Trp Lys Pro 130 135 140 Asn Tyr Ala Pro Ala Asn Cys Pro Lys Ser 145 150 167 amino acids amino acid unknown protein 109 Met Asn Thr Leu Gln Lys Gly Phe Thr Leu Ile Glu Leu Met Ile Val 1 5 10 15 Ile Ala Ile Val Gly Ile Leu Ala Ala Val Ala Leu Pro Ala Tyr Gln 20 25 30 Asp Tyr Thr Ala Arg Ala Gln Val Ser Glu Ala Ile Leu Leu Ala Glu 35 40 45 Gly Gln Lys Ser Ala Val Thr Glu Tyr Tyr Leu Asn His Gly Ile Trp 50 55 60 Pro Lys Asp Asn Thr Ser Ala Gly Val Ala Ser Ser Ser Ser Ile Lys 65 70 75 80 Gly Lys Tyr Val Lys Glu Val Lys Val Glu Asn Gly Val Val Thr Ala 85 90 95 Thr Met Asn Ser Ser Asn Val Asn Lys Glu Ile Gln Gly Lys Lys Leu 100 105 110 Ser Leu Trp Ala Lys Arg Gln Asp Gly Ser Val Lys Trp Phe Cys Gly 115 120 125 Gln Pro Val Thr Arg Asn Ala Lys Asp Asp Thr Val Thr Ala Asp Ala 130 135 140 Thr Gly Asn Asp Gly Lys Ile Asp Thr Lys His Leu Pro Ser Thr Cys 145 150 155 160 Arg Asp Asn Phe Asp Ala Ser 165 213 amino acids amino acid unknown protein 110 Met Lys Lys Thr Leu Leu Gly Ser Leu Ile Leu Leu Ala Phe Ala Gly 1 5 10 15 Asn Val Gln Ala Asp Ile Asn Thr Glu Thr Ser Gly Lys Val Thr Phe 20 25 30 Phe Gly Lys Val Val Glu Asn Thr Cys Lys Val Lys Thr Glu His Lys 35 40 45 Asn Leu Ser Val Val Leu Asn Asp Val Gly Lys Asn Ser Leu Ser Thr 50 55 60 Lys Val Asn Thr Ala Met Pro Thr Pro Phe Thr Ile Thr Leu Gln Asn 65 70 75 80 Cys Asp Pro Thr Thr Ala Asn Gly Thr Ala Asn Lys Ala Asn Lys Val 85 90 95 Gly Leu Tyr Phe Tyr Ser Trp Lys Asn Val Asp Lys Glu Asn Asn Phe 100 105 110 Thr Leu Lys Asn Glu Gln Thr Thr Ala Asp Tyr Ala Thr Asn Val Asn 115 120 125 Ile Gln Leu Met Glu Ser Asn Gly Thr Lys Ala Ile Ser Val Val Gly 130 135 140 Lys Glu Thr Glu Asp Phe Met His Thr Asn Asn Asn Gly Val Ala Leu 145 150 155 160 Asn Gln Thr His Pro Asn Asn Ala His Ile Ser Gly Ser Thr Gln Leu 165 170 175 Thr Thr Gly Thr Asn Glu Leu Pro Leu His Phe Ile Ala Gln Tyr Tyr 180 185 190 Ala Thr Asn Lys Ala Thr Ala Gly Lys Val Gln Ser Ser Val Asp Phe 195 200 205 Gln Ile Ala Tyr Glu 210 234 amino acids amino acid unknown protein 111 Met Asn Lys Lys Leu Leu Met Asn Phe Phe Ile Val Ser Pro Leu Leu 1 5 10 15 Leu Ala Thr Thr Ala Thr Asp Phe Thr Pro Val Pro Leu Ser Ser Asn 20 25 30 Gln Ile Ile Lys Thr Ala Lys Ala Ser Thr Asn Asp Asn Ile Lys Asp 35 40 45 Leu Leu Asp Trp Tyr Ser Ser Gly Ser Asp Thr Phe Thr Asn Ser Glu 50 55 60 Val Leu Asp Asn Ser Leu Gly Ser Met Arg Ile Lys Asn Thr Asp Gly 65 70 75 80 Ser Ile Ser Leu Ile Ile Phe Pro Ser Pro Tyr Tyr Ser Pro Ala Phe 85 90 95 Thr Lys Gly Glu Lys Val Asp Leu Asn Thr Lys Arg Thr Lys Lys Ser 100 105 110 Gln His Thr Ser Glu Gly Thr Tyr Ile His Phe Gln Ile Ser Gly Val 115 120 125 Thr Asn Thr Glu Lys Leu Pro Thr Pro Ile Glu Leu Pro Leu Lys Val 130 135 140 Lys Val His Gly Lys Asp Ser Pro Leu Lys Tyr Gly Pro Lys Phe Asp 145 150 155 160 Lys Lys Gln Leu Ala Ile Ser Thr Leu Asp Phe Glu Ile Arg His Gln 165 170 175 Leu Thr Gln Ile His Gly Leu Tyr Arg Ser Ser Asp Lys Thr Gly Gly 180 185 190 Tyr Trp Lys Ile Thr Met Asn Asp Gly Ser Thr Tyr Gln Ser Asp Leu 195 200 205 Ser Lys Lys Phe Glu Tyr Asn Thr Glu Lys Pro Pro Ile Asn Ile Asp 210 215 220 Glu Ile Lys Thr Ile Glu Ala Glu Ile Asn 225 230 257 amino acids amino acid unknown protein 112 Met Lys Lys Thr Ala Phe Ile Leu Leu Leu Phe Ile Ala Leu Thr Leu 1 5 10 15 Thr Thr Ser Pro Leu Val Asn Gly Ser Glu Lys Ser Glu Glu Ile Asn 20 25 30 Glu Lys Asp Leu Arg Lys Lys Ser Glu Leu Gln Arg Asn Ala Leu Ser 35 40 45 Asn Leu Arg Gln Ile Tyr Tyr Tyr Asn Glu Lys Ala Ile Thr Glu Asn 50 55 60 Lys Glu Ser Asp Asp Gln Phe Leu Glu Asn Thr Leu Leu Phe Lys Gly 65 70 75 80 Phe Phe Thr Gly His Pro Trp Tyr Asn Asp Leu Leu Val Asp Leu Gly 85 90 95 Ser Lys Asp Ala Thr Asn Lys Tyr Lys Gly Lys Lys Val Asp Leu Tyr 100 105 110 Gly Ala Tyr Tyr Gly Tyr Gln Cys Ala Gly Gly Thr Pro Asn Lys Thr 115 120 125 Ala Cys Met Tyr Gly Gly Val Thr Leu His Asp Asn Asn Arg Leu Thr 130 135 140 Glu Glu Lys Lys Val Pro Ile Asn Leu Trp Ile Asp Gly Lys Gln Thr 145 150 155 160 Thr Val Pro Ile Asp Lys Val Lys Thr Ser Lys Lys Glu Val Thr Val 165 170 175 Gln Glu Leu Asp Leu Gln Ala Arg His Tyr Leu His Gly Lys Phe Gly 180 185 190 Leu Tyr Asn Ser Asp Ser Phe Gly Gly Lys Val Gln Arg Gly Leu Ile 195 200 205 Val Phe His Ser Ser Glu Gly Ser Thr Val Ser Tyr Asp Leu Phe Asp 210 215 220 Ala Gln Gly Gln Tyr Pro Asp Thr Leu Leu Arg Ile Tyr Arg Asp Asn 225 230 235 240 Lys Thr Ile Asn Ser Glu Asn Leu His Ile Asp Leu Tyr Leu Tyr Thr 245 250 255 Thr 257 amino acids amino acid unknown protein 113 Met Lys Lys Thr Ala Phe Thr Leu Leu Leu Phe Ile Ala Leu Thr Leu 1 5 10 15 Thr Thr Ser Pro Leu Val Asn Gly Ser Glu Lys Ser Glu Glu Ile Asn 20 25 30 Glu Lys Asp Leu Arg Lys Lys Ser Glu Leu Gln Gly Thr Ala Leu Gly 35 40 45 Asn Leu Lys Gln Ile Tyr Tyr Tyr Asn Glu Lys Ala Lys Thr Glu Asn 50 55 60 Lys Glu Ser His Asp Gln Phe Leu Gln His Thr Ile Leu Phe Lys Gly 65 70 75 80 Phe Phe Thr Asp His Ser Trp Tyr Asn Asp Leu Leu Val Asp Phe Asp 85 90 95 Ser Lys Asp Ile Val Asp Lys Tyr Lys Gly Lys Lys Val Asp Leu Tyr 100 105 110 Gly Ala Tyr Tyr Gly Tyr Gln Cys Ala Gly Gly Thr Pro Asn Lys Thr 115 120 125 Ala Cys Met Tyr Gly Gly Val Thr Leu His Asp Asn Asn Arg Leu Thr 130 135 140 Glu Glu Lys Lys Val Pro Ile Asn Leu Trp Leu Asp Gly Lys Gln Asn 145 150 155 160 Thr Val Pro Leu Glu Thr Val Lys Thr Asn Lys Lys Asn Val Thr Val 165 170 175 Gln Glu Leu Asp Leu Gln Ala Arg Arg Tyr Leu Gln Glu Lys Tyr Asn 180 185 190 Leu Tyr Asn Ser Asp Val Phe Asp Gly Lys Val Gln Arg Gly Leu Ile 195 200 205 Val Phe His Thr Ser Thr Glu Pro Ser Val Asn Tyr Asp Leu Phe Gly 210 215 220 Ala Gln Gly Gln Tyr Ser Asn Thr Leu Leu Arg Ile Tyr Arg Asp Asn 225 230 235 240 Lys Thr Ile Asn Ser Glu Asn Met His Ile Asp Ile Tyr Leu Tyr Thr 245 250 255 Ser 254 amino acids amino acid unknown protein 114 Met Lys Asn Ile Thr Phe Ile Phe Phe Ile Leu Leu Ala Ser Pro Leu 1 5 10 15 Tyr Ala Asn Gly Asp Arg Leu Tyr Arg Ala Asp Ser Arg Pro Pro Asp 20 25 30 Glu Ile Lys Arg Phe Arg Ser Leu Met Pro Arg Gly Asn Glu Tyr Phe 35 40 45 Asp Arg Gly Thr Gln Met Asn Ile Asn Leu Tyr Asp His Ala Arg Gly 50 55 60 Thr Gln Thr Gly Phe Val Arg Tyr Asp Asp Gly Tyr Val Ser Thr Ser 65 70 75 80 Leu Ser Leu Arg Ser Ala His Leu Ala Gly Gln Tyr Ile Leu Ser Gly 85 90 95 Tyr Ser Leu Thr Ile Tyr Ile Val Ile Ala Asn Met Phe Asn Val Asn 100 105 110 Asp Val Ile Ser Val Tyr Ser Pro His Pro Tyr Glu Gln Glu Val Ser 115 120 125 Ala Leu Gly Gly Ile Pro Tyr Ser Gln Ile Tyr Gly Trp Tyr Arg Val 130 135 140 Asn Phe Gly Val Ile Asp Glu Arg Leu His Arg Asn Arg Glu Tyr Arg 145 150 155 160 Asp Arg Tyr Tyr Arg Asn Leu Asn Ile Ala Pro Ala Glu Asp Gly Tyr 165 170 175 Arg Leu Ala Gly Phe Pro Pro Asp His Gln Ala Trp Arg Glu Glu Pro 180 185 190 Trp Ile His His Ala Pro Gln Gly Cys Gly Asp Ser Ser Arg Thr Ile 195 200 205 Thr Gly Asp Thr Cys Asn Glu Glu Thr Gln Asn Leu Ser Thr Ile Tyr 210 215 220 Leu Arg Glu Tyr Gln Ser Lys Val Lys Arg Gln Ile Phe Ser Asp Tyr 225 230 235 240 Gln Ser Glu Val Asp Ile Tyr Asn Arg Ile Arg Asp Glu Leu 245 250 380 amino acids amino acid unknown protein 115 Met Met Phe Ser Gly Phe Asn Ala Asp Tyr Glu Ala Ser Ser Ser Arg 1 5 10 15 Cys Ser Ser Ala Ser Pro Ala Gly Asp Ser Leu Ser Tyr Tyr His Ser 20 25 30 Pro Ala Asp Ser Phe Ser Ser Met Gly Ser Pro Val Asn Ala Gln Asp 35 40 45 Phe Cys Thr Asp Leu Ala Val Ser Ser Ala Asn Phe Ile Pro Thr Val 50 55 60 Thr Ala Ile Ser Thr Ser Pro Asp Leu Gln Trp Leu Val Gln Pro Ala 65 70 75 80 Leu Val Ser Ser Val Ala Pro Ser Gln Thr Arg Ala Pro His Pro Phe 85 90 95 Gly Val Pro Ala Pro Ser Ala Gly Ala Tyr Ser Arg Ala Gly Val Val 100 105 110 Lys Thr Met Thr Gly Gly Arg Ala Gln Ser Ile Gly Arg Arg Gly Lys 115 120 125 Val Glu Gln Leu Ser Pro Glu Glu Glu Glu Lys Arg Arg Ile Arg Arg 130 135 140 Glu Arg Asn Lys Met Ala Ala Ala Lys Cys Arg Asn Arg Arg Arg Glu 145 150 155 160 Leu Thr Asp Thr Leu Gln Ala Glu Thr Asp Gln Leu Glu Asp Glu Lys 165 170 175 Ser Ala Leu Gln Thr Glu Ile Ala Asn Leu Leu Lys Glu Lys Glu Lys 180 185 190 Leu Glu Phe Ile Leu Ala Ala His Arg Pro Ala Cys Lys Ile Pro Asp 195 200 205 Asp Leu Gly Phe Pro Glu Glu Met Ser Val Ala Ser Leu Asp Leu Thr 210 215 220 Gly Gly Leu Pro Glu Val Ala Thr Pro Glu Ser Glu Glu Ala Phe Thr 225 230 235 240 Leu Pro Leu Leu Asn Asp Pro Glu Pro Lys Pro Ser Val Glu Pro Val 245 250 255 Lys Ser Ile Ser Ser Met Glu Leu Lys Thr Glu Pro Phe Asp Asp Phe 260 265 270 Leu Phe Pro Ala Ser Ser Arg Pro Ser Gly Ser Glu Thr Ala Arg Ser 275 280 285 Val Pro Asp Met Asp Leu Ser Gly Ser Phe Tyr Ala Leu Pro Leu Leu 290 295 300 Asn Asp Pro Glu Pro Lys Pro Ser Val Glu Pro Val Lys Ser Ile Ser 305 310 315 320 Ser Met Glu Leu Lys Thr Glu Pro Phe Asp Asp Phe Leu Phe Pro Ala 325 330 335 Ser Ser Arg Pro Ser Gly Ser Glu Thr Ala Arg Ser Val Pro Asp Met 340 345 350 Asp Leu Ser Gly Ser Phe Tyr Ala Gly Ser Ser Ser Asn Glu Pro Ser 355 360 365 Ser Asp Ser Leu Ser Ser Pro Thr Leu Leu Ala Leu 370 375 380 607 amino acids amino acid unknown protein 116 Ser Gly Trp Glu Ser Tyr Tyr Lys Thr Glu Gly Asp Glu Glu Ala Glu 1 5 10 15 Glu Glu Gln Glu Glu Asn Leu Glu Ala Ser Gly Asp Tyr Lys Tyr Ser 20 25 30 Gly Arg Asp Ser Leu Ile Phe Leu Val Asp Ala Ser Lys Ala Met Phe 35 40 45 Glu Ser Gln Ser Glu Asp Glu Leu Thr Pro Phe Asp Met Ser Ile Gln 50 55 60 Cys Ile Gln Ser Val Tyr Ile Ser Lys Ile Ile Ser Ser Asp Arg Asp 65 70 75 80 Leu Leu Ala Val Val Phe Tyr Gly Thr Glu Lys Asp Lys Asn Ser Val 85 90 95 Asn Phe Lys Asn Ile Tyr Val Leu Gln Glu Leu Asp Asn Pro Gly Ala 100 105 110 Lys Arg Ile Leu Glu Leu Asp Gln Phe Lys Gly Gln Gln Gly Gln Lys 115 120 125 Arg Phe Gln Asp Met Met Gly His Gly Ser Asp Tyr Ser Leu Ser Glu 130 135 140 Val Leu Trp Val Cys Ala Asn Leu Phe Ser Asp Val Gln Phe Lys Met 145 150 155 160 Ser His Lys Arg Ile Met Leu Phe Thr Asn Glu Asp Asn Pro His Gly 165 170 175 Asn Asp Ser Ala Lys Ala Ser Arg Ala Arg Thr Lys Ala Gly Asp Leu 180 185 190 Arg Asp Thr Gly Ile Phe Leu Asp Leu Met His Leu Lys Lys Pro Gly 195 200 205 Gly Phe Asp Ile Ser Leu Phe Tyr Arg Asp Ile Ile Ser Ile Ala Glu 210 215 220 Asp Glu Asp Leu Arg Val His Phe Glu Glu Ser Ser Lys Leu Glu Asp 225 230 235 240 Leu Leu Arg Lys Val Arg Ala Lys Glu Thr Arg Lys Arg Ala Leu Ser 245 250 255 Arg Leu Lys Leu Lys Leu Asn Lys Asp Ile Val Ile Ser Val Gly Ile 260 265 270 Tyr Asn Leu Val Gln Lys Ala Leu Lys Pro Pro Pro Ile Lys Leu Tyr 275 280 285 Arg Glu Thr Asn Glu Pro Val Lys Thr Lys Thr Arg Thr Phe Asn Thr 290 295 300 Ser Thr Gly Gly Leu Leu Leu Pro Ser Asp Thr Lys Arg Ser Gln Ile 305 310 315 320 Tyr Gly Ser Arg Gln Ile Ile Leu Glu Lys Glu Glu Thr Glu Glu Leu 325 330 335 Lys Arg Phe Asp Asp Pro Gly Leu Met Leu Met Gly Phe Lys Pro Leu 340 345 350 Val Leu Leu Lys Lys His His Leu Arg Pro Ser Leu Phe Val Tyr Pro 355 360 365 Glu Glu Ser Leu Val Ile Gly Ser Ser Thr Leu Phe Ser Ala Leu Leu 370 375 380 Ile Lys Cys Leu Glu Lys Glu Val Ala Ala Leu Cys Arg Tyr Thr Pro 385 390 395 400 Arg Arg Asn Ile Pro Pro Tyr Phe Val Ala Leu Val Pro Gln Glu Glu 405 410 415 Glu Leu Asp Asp Gln Lys Ile Gln Val Thr Pro Pro Gly Phe Gln Leu 420 425 430 Val Phe Leu Pro Phe Ala Asp Asp Lys Arg Lys Met Pro Phe Thr Glu 435 440 445 Lys Ile Met Ala Thr Pro Glu Gln Val Gly Lys Met Lys Ala Ile Val 450 455 460 Glu Lys Leu Arg Phe Thr Tyr Arg Ser Asp Ser Phe Glu Asn Pro Val 465 470 475 480 Leu Gln Gln His Phe Arg Asn Leu Glu Ala Leu Ala Leu Asp Leu Met 485 490 495 Glu Pro Glu Gln Ala Val Asp Leu Thr Leu Pro Lys Val Glu Ala Met 500 505 510 Asn Lys Arg Leu Gly Ser Leu Val Asp Glu Phe Lys Glu Leu Val Tyr 515 520 525 Pro Pro Asp Tyr Asn Pro Glu Gly Lys Val Thr Lys Arg Lys His Asp 530 535 540 Asn Glu Gly Ser Gly Ser Lys Arg Pro Lys Val Glu Tyr Ser Glu Glu 545 550 555 560 Glu Leu Lys Thr His Ile Ser Lys Gly Thr Leu Gly Lys Phe Thr Val 565 570 575 Pro Met Leu Lys Glu Ala Cys Arg Ala Tyr Gly Leu Lys Ser Gly Leu 580 585 590 Lys Lys Gln Glu Leu Leu Glu Ala Leu Thr Lys His Phe Gln Asp 595 600 605 462 amino acids amino acid unknown protein 117 Gly Gly Gly Ala Leu Ser Pro Gln His Ser Ala Val Thr Gln Gly Ser 1 5 10 15 Ile Ile Lys Asn Lys Glu Gly Met Asp Ala Lys Ser Leu Thr Ala Trp 20 25 30 Ser Arg Thr Leu Val Thr Phe Lys Asp Val Phe Val Asp Phe Thr Arg 35 40 45 Glu Glu Trp Lys Leu Leu Asp Thr Ala Gln Gln Ile Val Tyr Arg Asn 50 55 60 Val Met Leu Glu Asn Tyr Lys Asn Leu Val Ser Leu Gly Tyr Gln Leu 65 70 75 80 Thr Lys Pro Asp Val Ile Leu Arg Leu Glu Lys Gly Glu Glu Pro Trp 85 90 95 Leu Val Glu Arg Glu Ile His Gln Glu Thr His Pro Asp Ser Glu Thr 100 105 110 Ala Phe Glu Ile Lys Ser Ser Val Ser Ser Arg Ser Ile Phe Lys Asp 115 120 125 Lys Gln Ser Cys Asp Ile Lys Met Glu Gly Met Ala Arg Asn Asp Leu 130 135 140 Trp Tyr Leu Ser Leu Glu Glu Val Trp Lys Cys Arg Asp Gln Leu Asp 145 150 155 160 Lys Tyr Gln Glu Asn Pro Glu Arg His Leu Arg His Gln Leu Ile His 165 170 175 Thr Gly Glu Lys Pro Tyr Glu Cys Lys Glu Cys Gly Lys Ser Phe Ser 180 185 190 Arg Ser Ser His Leu Ile Gly His Gln Lys Thr His Thr Gly Glu Glu 195 200 205 Pro Tyr Glu Cys Lys Glu Cys Gly Lys Ser Phe Ser Trp Phe Ser His 210 215 220 Leu Val Thr His Gln Arg Thr His Thr Gly Asp Lys Leu Tyr Thr Cys 225 230 235 240 Asn Gln Cys Gly Lys Ser Phe Val His Ser Ser Arg Leu Ile Arg His 245 250 255 Gln Arg Thr His Thr Gly His Lys Pro Tyr Glu Cys Pro Glu Cys Gly 260 265 270 Lys Ser Phe Arg Gln Ser Thr His Leu Ile Leu His Gln Arg Thr His 275 280 285 Val Arg Val Arg Pro Tyr Glu Cys Asn Glu Cys Gly Lys Ser Tyr Ser 290 295 300 Gln Arg Ser His Leu Val Val His His Arg Ile His Thr Gly Leu Lys 305 310 315 320 Pro Phe Glu Cys Lys Asp Cys Gly Lys Cys Phe Ser Arg Ser Ser His 325 330 335 Leu Tyr Ser His Gln Arg Thr His Thr Gly Glu Lys Pro Tyr Glu Cys 340 345 350 His Asp Cys Gly Lys Ser Phe Ser Gln Ser Ser Ala Leu Ile Val His 355 360 365 Gln Arg Ile His Thr Gly Glu Lys Pro Tyr Glu Cys Cys Gln Cys Gly 370 375 380 Lys Ala Phe Ile Arg Lys Asn Asp Leu Ile Lys His Gln Arg Ile His 385 390 395 400 Val Gly Ala Glu Thr Tyr Lys Cys Asn Gln Cys Gly Ile Ile Phe Ser 405 410 415 Gln Asn Ser Pro Phe Ile Val His Gln Ile Ala His Thr Gly Glu Gln 420 425 430 Phe Leu Thr Cys Asn Gln Cys Gly Thr Ala Leu Val Asn Thr Ser Asn 435 440 445 Leu Ile Gly Tyr Gln Thr Asn His Ile Arg Glu Asn Ala Tyr 450 455 460 35 amino acids amino acid unknown peptide 118 Pro Asp Ala Val Tyr Leu His Arg Ile Asp Leu Gly Pro Pro Ile Ser 1 5 10 15 Leu Glu Arg Leu Asp Val Gly Thr Asn Leu Gly Asn Ala Ile Ala Lys 20 25 30 Leu Glu Asp 35 34 amino acids amino acid unknown peptide 119 Leu Glu Arg Leu Asp Val Gly Thr Asn Leu Gly Asn Ala Ile Ala Lys 1 5 10 15 Leu Glu Ala Lys Glu Leu Leu Glu Ser Ser Asp Gln Ile Leu Arg Ser 20 25 30 Met Lys 47 amino acids amino acid unknown peptide 120 Thr Trp Gln Glu Trp Glu Arg Lys Val Asp Phe Leu Glu Glu Asn Ile 1 5 10 15 Thr Ala Leu Leu Glu Glu Ala Gln Ile Gln Gln Glu Lys Asn Met Tyr 20 25 30 Glu Leu Gln Lys Leu Asn Ser Trp Asp Val Phe Gly Asn Trp Phe 35 40 45 42 amino acids amino acid unknown peptide 121 Ile Glu Leu Ser Asn Ile Lys Glu Asn Lys Cys Asn Gly Thr Asp Ala 1 5 10 15 Lys Val Lys Leu Ile Lys Gln Glu Leu Asp Lys Tyr Lys Asn Ala Val 20 25 30 Thr Glu Leu Gln Leu Leu Met Gln Ser Thr 35 40 27 amino acids amino acid unknown peptide 122 Val Ser Lys Gly Tyr Ser Ala Leu Arg Thr Gly Trp Tyr Thr Ser Val 1 5 10 15 Ile Thr Ile Glu Leu Ser Asn Ile Lys Glu Asn 20 25 13 amino acids amino acid unknown peptide 123 Ala Phe Ile Arg Lys Ser Asp Glu Leu Leu His Asn Val 1 5 10 35 amino acids amino acid unknown peptide Modified-site 17 /product= “OTHER” /note= “X represents U, the standard designation for C-abu, a modified cysteine.” 124 Tyr Thr Ser Val Ile Thr Ile Glu Leu Ser Asn Ile Lys Glu Asn Lys 1 5 10 15 Xaa Asn Gly Thr Asp Ala Lys Val Lys Leu Ile Lys Gln Glu Leu Asp 20 25 30 Lys Tyr Lys 35 35 amino acids amino acid unknown peptide Modified-site 16 /product= “OTHER” /note= “X represents U, the standard designation for C-abu, a modified cysteine.” 125 Thr Ser Val Ile Thr Ile Glu Leu Ser Asn Ile Lys Glu Asn Lys Xaa 1 5 10 15 Asn Gly Thr Asp Ala Lys Val Lys Leu Ile Lys Gln Glu Leu Asp Lys 20 25 30 Tyr Lys Asn 35 35 amino acids amino acid unknown peptide Modified-site 15 /product= “OTHER” /note= “X represents U, the standard designation for C-abu, a modified cysteine.” 126 Ser Val Ile Thr Ile Glu Leu Ser Asn Ile Lys Glu Asn Lys Xaa Asn 1 5 10 15 Gly Thr Asp Ala Lys Val Lys Leu Ile Lys Gln Glu Leu Asp Lys Tyr 20 25 30 Lys Asn Ala 35 35 amino acids amino acid unknown peptide Modified-site /product= “OTHER” /note= “X represents U, the standard designation for C-abu, a modified cysteine.” 127 Ser Asn Ile Lys Glu Asn Lys Xaa Asn Gly Thr Asp Ala Lys Val Lys 1 5 10 15 Leu Ile Lys Gln Glu Leu Asp Lys Tyr Lys Asn Ala Val Thr Glu Leu 20 25 30 Gln Leu Leu 35 35 amino acids amino acid unknown peptide Modified-site /product= “OTHER” /note= “X represents U, the standard designation for C-abu, a modified cysteine.” 128 Lys Glu Asn Lys Xaa Asn Gly Thr Asp Ala Lys Val Lys Leu Ile Lys 1 5 10 15 Gln Glu Leu Asp Lys Tyr Lys Asn Ala Val Thr Glu Leu Gln Leu Leu 20 25 30 Met Gln Ser 35 36 amino acids amino acid unknown peptide Modified-site 31 /product= “OTHER” /note= “X represents U, the standard designation for C-abu, a modified cysteine.” 129 Ala Val Ser Lys Gly Tyr Leu Ser Ala Leu Arg Thr Gly Trp Tyr Thr 1 5 10 15 Ser Val Ile Thr Ile Glu Leu Ser Asn Ile Lys Glu Asn Lys Xaa Asn 20 25 30 Gly Thr Asp Ala 35 27 amino acids amino acid unknown peptide 130 Val Val Ser Leu Ser Asn Gly Val Ser Val Leu Thr Ser Lys Val Leu 1 5 10 15 Asp Leu Lys Asn Tyr Ile Asp Lys Gln Leu Leu 20 25 28 amino acids amino acid unknown peptide 131 Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly Val Ser 1 5 10 15 Val Leu Thr Ser Lys Val Leu Asp Leu Lys Asn Tyr 20 25 28 amino acids amino acid unknown peptide 132 Val Leu His Leu Glu Gly Glu Val Asn Lys Ile Lys Ser Ala Leu Leu 1 5 10 15 Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly 20 25 28 amino acids amino acid unknown peptide 133 Leu Leu Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly Val Ser 1 5 10 15 Val Leu Thr Ser Lys Val Leu Asp Leu Lys Asn Tyr 20 25 37 amino acids amino acid unknown peptide 134 Ala Ser Gly Val Ala Val Ser Lys Val Leu His Leu Glu Gly Glu Val 1 5 10 15 Asn Lys Ile Lys Ser Ala Leu Leu Ser Thr Asn Lys Ala Val Val Ser 20 25 30 Leu Ser Asn Gly Val 35 35 amino acids amino acid unknown peptide 135 Val Leu His Leu Glu Gly Glu Val Asn Lys Ile Lys Ser Ala Leu Leu 1 5 10 15 Ser Thr Asn Lys Ala Val Val Ser Leu Ser Asn Gly Val Ser Val Leu 20 25 30 Thr Ser Lys 35 28 amino acids amino acid unknown peptide 136 Asn Asp Gln Lys Lys Leu Met Ser Asn Asn Val Gln Ile Val Arg Gln 1 5 10 15 Gln Ser Tyr Ser Ile Met Ser Ile Ile Lys Glu Glu 20 25 36 amino acids amino acid unknown peptide 137 Ser Ile Ser Asn Ile Glu Thr Val Ile Glu Phe Gln Gln Lys Asn Asn 1 5 10 15 Arg Leu Leu Glu Ile Thr Arg Glu Phe Ser Val Asn Ala Gly Val Thr 20 25 30 Thr Pro Val Ser 35 35 amino acids amino acid unknown peptide 138 Pro Ile Ile Asn Phe Tyr Asp Pro Leu Val Phe Pro Ser Asp Glu Phe 1 5 10 15 Asp Ala Ser Ile Ser Gln Val Asn Glu Lys Ile Asn Gln Ser Leu Ala 20 25 30 Phe Ile Arg 35 29 amino acids amino acid unknown peptide 139 Arg Met Lys Gln Leu Glu Asp Lys Val Glu Glu Leu Leu Ser Lys Leu 1 5 10 15 Ala Phe Ile Arg Lys Ser Asp Glu Leu Leu His Asn Val 20 25 19 amino acids amino acid unknown peptide 140 Ala Phe Ile Arg Lys Ser Asp Glu Leu Leu His Asn Val Asn Ala Gly 1 5 10 15 Lys Ser Thr 19 amino acids amino acid unknown peptide 141 Phe Asp Ala Ser Ile Ser Gln Val Asn Glu Lys Ile Asn Gln Ser Leu 1 5 10 15 Ala Phe Ile 21 amino acids amino acid unknown peptide 142 Ser Leu Ala Phe Ile Arg Lys Ser Asp Glu Leu Leu His Asn Val Asn 1 5 10 15 Ala Gly Lys Ser Thr 20 33 amino acids amino acid unknown peptide 143 Phe Asp Ala Ser Ile Ser Gln Val Asn Glu Lys Ile Asn Gln Ser Leu 1 5 10 15 Ala Phe Ile Arg Lys Ser Asp Glu Leu Leu His Asn Val Asn Ala Gly 20 25 30 Lys 33 amino acids amino acid unknown peptide 144 Ala Ser Ile Ser Gln Val Asn Glu Lys Ile Asn Gln Ser Leu Ala Phe 1 5 10 15 Ile Arg Lys Ser Asp Glu Leu Leu His Asn Val Asn Ala Gly Lys Ser 20 25 30 Thr 35 amino acids amino acid unknown peptide 145 Phe Asp Ala Ser Ile Ser Gln Val Asn Glu Lys Ile Asn Gln Ser Leu 1 5 10 15 Ala Phe Ile Arg Lys Ser Asp Glu Leu Leu His Asn Val Asn Ala Gly 20 25 30 Lys Ser Thr 35 28 amino acids amino acid unknown peptide 146 Ala Thr Ser Ala Gln Ile Thr Ala Ala Val Ala Leu Val Glu Ala Lys 1 5 10 15 Gln Ala Arg Ser Asp Ile Glu Lys Leu Lys Glu Ala 20 25 35 amino acids amino acid unknown peptide 147 Ala Ala Val Ala Leu Val Glu Ala Lys Gln Ala Arg Ser Asp Ile Glu 1 5 10 15 Lys Leu Lys Glu Ala Ile Arg Asp Thr Asn Lys Ala Val Gln Ser Val 20 25 30 Gln Ser Ser 35 35 amino acids amino acid unknown peptide 148 Ala Lys Gln Ala Arg Ser Asp Ile Glu Lys Leu Lys Glu Ala Ile Arg 1 5 10 15 Asp Thr Asn Lys Ala Val Gln Ser Val Gln Ser Ser Ile Gly Asn Leu 20 25 30 Ile Val Ala 35 28 amino acids amino acid unknown peptide 149 Ile Arg Asp Thr Asn Lys Ala Val Gln Ser Val Gln Ser Ser Ile Gly 1 5 10 15 Asn Leu Ile Val Ala Ile Lys Ser Val Gln Asp Tyr 20 25 28 amino acids amino acid unknown peptide 150 Ala Val Gln Ser Val Gln Ser Ser Ile Gly Asn Leu Ile Val Ala Ile 1 5 10 15 Lys Ser Val Gln Asp Tyr Val Asn Lys Glu Ile Val 20 25 28 amino acids amino acid unknown peptide 151 Leu Lys Glu Ala Ile Arg Asp Thr Asn Lys Ala Val Gln Ser Val Gln 1 5 10 15 Ser Ser Ile Gly Asn Leu Ile Val Ala Ile Lys Ser 20 25 13 amino acids amino acid unknown peptide 152 Glu Trp Ile Arg Arg Ser Asn Gln Lys Leu Asp Ser Ile 1 5 10 35 amino acids amino acid unknown peptide 153 Ile Asp Ile Ser Ile Glu Leu Asn Lys Ala Lys Ser Asp Leu Glu Glu 1 5 10 15 Ser Lys Glu Trp Ile Lys Lys Ser Asn Gln Lys Leu Asp Ser Ile Gly 20 25 30 Asn Trp His 35 29 amino acids amino acid unknown peptide 154 Arg Met Lys Gln Leu Glu Asp Lys Val Glu Glu Leu Leu Ser Lys Leu 1 5 10 15 Glu Trp Ile Arg Arg Ser Asn Gln Lys Leu Asp Ser Ile 20 25 35 amino acids amino acid unknown peptide 155 Asp Gln Gln Ile Lys Gln Tyr Lys Arg Leu Leu Asp Arg Leu Ile Ile 1 5 10 15 Pro Leu Tyr Asp Gly Leu Arg Gln Lys Asp Val Ile Val Ser Asn Gln 20 25 30 Glu Ser Asn 35 36 amino acids amino acid unknown peptide 156 Tyr Ser Glu Leu Thr Asn Ile Phe Gly Asp Asn Ile Gly Ser Leu Gln 1 5 10 15 Glu Lys Gly Ile Lys Leu Gln Gly Ile Ala Ser Leu Tyr Arg Thr Asn 20 25 30 Ile Thr Glu Ile 35 36 amino acids amino acid unknown peptide 157 Thr Ser Ile Thr Leu Gln Val Arg Leu Pro Leu Leu Thr Arg Leu Leu 1 5 10 15 Asn Thr Gln Ile Tyr Arg Val Asp Ser Ile Ser Tyr Asn Ile Gln Asn 20 25 30 Arg Glu Trp Tyr 35 57 amino acids amino acid unknown peptide 158 Asn Lys Ser Leu Glu Gln Ile Trp Asn Asn Met Thr Trp Met Glu Trp 1 5 10 15 Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu 20 25 30 Glu Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp 35 40 45 Lys Trp Ala Ser Leu Trp Asn Trp Phe 50 55 35 amino acids amino acid unknown peptide 159 Trp Met Glu Trp Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile Gly 1 5 10 15 Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu 20 25 30 Leu Leu Glu 35 49 amino acids amino acid unknown peptide 160 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe Asn Ile Thr Asn Trp Leu Trp Leu Ile Lys Ile Phe 35 40 45 Ile 28 amino acids amino acid unknown peptide 161 Glu Ala Ala Ala Arg Glu Ala Ala Ala Arg Glu Ala Ala Ala Arg Leu 1 5 10 15 Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn Trp Phe 20 25 28 amino acids amino acid unknown peptide 162 Arg Met Lys Gln Leu Glu Asp Lys Val Glu Glu Leu Leu Ser Lys Leu 1 5 10 15 Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn Trp Phe 20 25 28 amino acids amino acid unknown peptide 163 Phe Trp Asn Trp Leu Ser Ala Trp Lys Asp Leu Glu Leu Lys Ser Leu 1 5 10 15 Leu Glu Glu Val Lys Asp Glu Leu Gln Lys Met Arg 20 25 35 amino acids amino acid unknown peptide 164 Arg Met Lys Gln Leu Glu Asp Lys Val Glu Glu Leu Leu Ser Lys Asn 1 5 10 15 Tyr His Leu Glu Asn Glu Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp 20 25 30 Asn Trp Phe 35 30 amino acids amino acid unknown peptide 165 Phe Trp Asn Trp Leu Ser Ala Trp Lys Asp Leu Glu Leu Tyr Pro Gly 1 5 10 15 Ser Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn Trp Phe 20 25 30 15 amino acids amino acid unknown peptide 166 Cys Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn Trp Phe Cys 1 5 10 15 15 amino acids amino acid unknown peptide 167 Cys Leu Glu Leu Asp Lys Trp Ala Ser Leu Ala Asn Trp Phe Cys 1 5 10 15 15 amino acids amino acid unknown peptide 168 Cys Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn Phe Phe Cys 1 5 10 15 13 amino acids amino acid unknown peptide 169 Leu Glu Leu Asp Lys Trp Ala Ser Leu Ala Asn Ala Phe 1 5 10 13 amino acids amino acid unknown peptide 170 Leu Glu Leu Asp Lys Trp Ala Ser Leu Phe Asn Phe Phe 1 5 10 13 amino acids amino acid unknown peptide 171 Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn Ala Phe 1 5 10 13 amino acids amino acid unknown peptide 172 Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn Trp Ala 1 5 10 13 amino acids amino acid unknown peptide 173 Leu Glu Leu Asp Lys Trp Ala Ser Ala Trp Asn Trp Phe 1 5 10 13 amino acids amino acid unknown peptide 174 Leu Glu Leu Asp Lys Ala Ala Ser Leu Trp Asn Trp Phe 1 5 10 13 amino acids amino acid unknown peptide 175 Leu Lys Leu Asp Lys Trp Ala Ser Leu Trp Asn Trp Phe 1 5 10 13 amino acids amino acid unknown peptide 176 Leu Glu Leu Lys Lys Trp Ala Ser Leu Trp Asn Trp Phe 1 5 10 39 amino acids amino acid unknown peptide 177 Cys Gly Gly Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln 1 5 10 15 Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp 20 25 30 Ala Ser Leu Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 178 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Ala Phe 35 36 amino acids amino acid unknown peptide 179 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Ala Asn Trp Phe 35 36 amino acids amino acid unknown peptide 180 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Gln Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 181 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Gln Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 182 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Gln Gln Glu Leu Leu Gln Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 183 Tyr Thr Ser Leu Ile Gln Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 184 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Gln Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 185 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asn Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 186 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Gln Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 187 Tyr Thr Ser Leu Ile His Ser Leu Ile Gln Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 188 Tyr Thr Ser Leu Ile His Ser Leu Ile Gln Gln Ser Gln Asn Gln Gln 1 5 10 15 Gln Lys Asn Gln Gln Gln Leu Leu Gln Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 189 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Ala Asn Ala Ala 35 36 amino acids amino acid unknown peptide 190 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Gln Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 191 Tyr Thr Ser Leu Ile Gln Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Gln Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 192 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Phe Asn Phe Phe 35 36 amino acids amino acid unknown peptide 193 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Leu Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 194 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Leu Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 195 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Phe Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 196 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Pro Ala Ser Leu 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 197 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Pro 20 25 30 Trp Asn Trp Phe 35 36 amino acids amino acid unknown peptide 198 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 1 5 10 15 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 20 25 30 Trp Asn Ser Phe 35 36 amino acids amino acid unknown peptide 199 Leu Leu Asp Asn Phe Glu Ser Thr Trp Glu Gln Ser Lys Glu Leu Trp 1 5 10 15 Glu Gln Gln Glu Ile Ser Ile Gln Asn Leu His Lys Ser Ala Leu Gln 20 25 30 Glu Tyr Trp Asn 35 36 amino acids amino acid unknown peptide 200 Leu Ser Asn Leu Leu Gln Ile Ser Asn Asn Ser Asp Glu Trp Leu Glu 1 5 10 15 Ala Leu Glu Ile Glu His Glu Lys Trp Lys Leu Thr Gln Trp Gln Ser 20 25 30 Tyr Glu Gln Phe 35 63 amino acids amino acid unknown peptide 201 Met Thr Leu Thr Val Gln Ala Arg Gln Leu Leu Ser Gly Ile Val Gln 1 5 10 15 Gln Gln Asn Asn Leu Leu Arg Ala Ile Glu Ala Gln Gln His Leu Leu 20 25 30 Gln Leu Thr Val Trp Gly Ile Lys Gln Leu Gln Ala Arg Ile Leu Ala 35 40 45 Val Glu Arg Tyr Leu Lys Asp Gln Gln Leu Leu Gly Ile Trp Gly 50 55 60 45 amino acids amino acid unknown peptide 202 Ser Glu Leu Glu Ile Lys Arg Tyr Lys Asn Arg Val Ala Ser Arg Lys 1 5 10 15 Cys Arg Ala Lys Phe Gln Leu Leu Gln His Tyr Arg Glu Val Ala Ala 20 25 30 Ala Lys Ser Ser Glu Asn Asp Arg Leu Arg Leu Leu Leu 35 40 45 45 amino acids amino acid unknown peptide 203 Ala Ser Arg Lys Cys Arg Ala Lys Phe Lys Gln Leu Leu Gln His Tyr 1 5 10 15 Arg Glu Val Ala Ala Ala Lys Ser Ser Glu Asn Asp Arg Leu Arg Leu 20 25 30 Leu Leu Lys Gln Met Cys Pro Ser Leu Asp Val Asp Ser 35 40 45 35 amino acids amino acid unknown peptide 204 Leu Leu Gln His Tyr Arg Glu Val Ala Ala Ala Lys Ser Ser Glu Asn 1 5 10 15 Asp Arg Leu Arg Leu Leu Leu Lys Gln Met Cys Pro Ser Leu Asp Val 20 25 30 Asp Ser Ile 35 45 amino acids amino acid unknown peptide 205 Leu Gln His Tyr Arg Glu Val Ala Ala Ala Lys Ser Ser Glu Asn Asp 1 5 10 15 Arg Leu Arg Leu Leu Leu Lys Gln Met Cys Pro Ser Leu Asp Val Asp 20 25 30 Ser Ile Ile Pro Arg Thr Pro Asp Val Leu His Glu Asp 35 40 45 35 amino acids amino acid unknown peptide 206 Ser Ser Glu Asn Asp Arg Leu Arg Leu Leu Leu Lys Gln Met Cys Pro 1 5 10 15 Ser Leu Asp Val Asp Ser Ile Ile Pro Arg Thr Pro Asp Val Leu His 20 25 30 Glu Asp Leu 35 37 amino acids amino acid unknown peptide 207 Ser Glu Asn Asp Arg Leu Arg Leu Leu Leu Lys Gln Met Cys Pro Ser 1 5 10 15 Leu Asp Val Asp Ser Ile Ile Pro Arg Thr Pro Asp Val Leu His Glu 20 25 30 Asp Leu Leu Asn Phe 35 46 amino acids amino acid unknown peptide 208 Pro Leu Leu Val Leu Gln Ala Gly Phe Phe Leu Leu Thr Arg Ile Leu 1 5 10 15 Thr Ile Pro Gln Ser Leu Asp Ser Trp Trp Thr Ser Leu Asn Phe Leu 20 25 30 Gly Gly Thr Thr Val Cys Leu Gly Gln Asn Ser Gln Ser Pro 35 40 45 57 amino acids amino acid unknown peptide 209 Pro Gly Tyr Arg Trp Met Cys Leu Arg Arg Phe Ile Ile Phe Leu Phe 1 5 10 15 Ile Leu Leu Leu Cys Leu Ile Phe Leu Leu Val Leu Leu Asp Tyr Gln 20 25 30 Gly Met Leu Pro Val Cys Pro Leu Ile Pro Gly Ser Ser Thr Ser Thr 35 40 45 Gly Pro Cys Arg Thr Cys Met Thr Thr 50 55 58 amino acids amino acid unknown peptide 210 Asn Lys Ser Leu Glu Gln Ile Trp Asn Asn Met Thr Trp Met Glu Trp 1 5 10 15 Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu 20 25 30 Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu 35 40 45 Asp Lys Trp Ala Ser Leu Trp Asn Trp Phe 50 55 36 amino acids amino acid unknown peptide 211 Ser Leu Glu Gln Ile Trp Asn Asn Met Thr Trp Met Glu Trp Asp Arg 1 5 10 15 Glu Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser 20 25 30 Gln Asn Gln Gln 35 36 amino acids amino acid unknown peptide 212 Leu Glu Gln Ile Trp Asn Asn Met Thr Trp Met Glu Trp Asp Arg Glu 1 5 10 15 Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln 20 25 30 Asn Gln Gln Arg 35 36 amino acids amino acid unknown peptide 213 Glu Gln Ile Trp Asn Asn Met Thr Trp Met Glu Trp Asp Arg Glu Ile 1 5 10 15 Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn 20 25 30 Gln Gln Glu Lys 35 36 amino acids amino acid unknown peptide 214 Gln Ile Trp Asn Asn Met Thr Trp Met Glu Trp Asp Arg Glu Ile Asn 1 5 10 15 Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln 20 25 30 Gln Glu Lys Asn 35 36 amino acids amino acid unknown peptide 215 Ile Trp Asn Asn Met Thr Trp Met Glu Trp Asp Arg Glu Ile Asn Asn 1 5 10 15 Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln 20 25 30 Glu Lys Asn Glu 35 36 amino acids amino acid unknown peptide 216 Trp Asn Asn Met Thr Trp Met Glu Trp Asp Arg Glu Ile Asn Asn Tyr 1 5 10 15 Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu 20 25 30 Lys Asn Glu Gln 35 36 amino acids amino acid unknown peptide 217 Asn Asn Met Thr Trp Met Glu Trp Asp Arg Glu Ile Asn Asn Tyr Thr 1 5 10 15 Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys 20 25 30 Asn Glu Gln Glu 35 36 amino acids amino acid unknown peptide 218 Asn Met Thr Trp Met Glu Trp Asp Arg Glu Ile Asn Asn Tyr Thr Ser 1 5 10 15 Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn 20 25 30 Glu Gln Glu Leu 35 47 amino acids amino acid unknown peptide 219 Met Thr Trp Met Glu Trp Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu 1 5 10 15 Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu 20 25 30 Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn Trp 35 40 45 36 amino acids amino acid unknown peptide 220 Thr Trp Met Glu Trp Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile 1 5 10 15 His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln 20 25 30 Glu Leu Leu Glu 35 36 amino acids amino acid unknown peptide 221 Trp Met Glu Trp Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile His 1 5 10 15 Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu 20 25 30 Leu Leu Glu Leu 35 35 amino acids amino acid unknown peptide 222 Trp Met Glu Trp Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile His 1 5 10 15 Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu 20 25 30 Leu Leu Glu 35 36 amino acids amino acid unknown peptide 223 Met Glu Trp Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile His Ser 1 5 10 15 Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu 20 25 30 Leu Glu Leu Asp 35 36 amino acids amino acid unknown peptide 224 Glu Trp Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu 1 5 10 15 Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu 20 25 30 Glu Leu Asp Lys 35 36 amino acids amino acid unknown peptide 225 Trp Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile 1 5 10 15 Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu 20 25 30 Leu Asp Lys Trp 35 36 amino acids amino acid unknown peptide 226 Asp Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu 1 5 10 15 Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu 20 25 30 Asp Lys Trp Ala 35 36 amino acids amino acid unknown peptide 227 Arg Glu Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu 1 5 10 15 Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp 20 25 30 Lys Trp Ala Ser 35 36 amino acids amino acid unknown peptide 228 Glu Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser 1 5 10 15 Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys 20 25 30 Trp Ala Ser Leu 35 36 amino acids amino acid unknown peptide 229 Ile Asn Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln 1 5 10 15 Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp 20 25 30 Ala Ser Leu Trp 35 36 amino acids amino acid unknown peptide 230 Asn Tyr Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln 1 5 10 15 Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser 20 25 30 Leu Trp Asn Trp 35 36 amino acids amino acid unknown peptide 231 Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu 1 5 10 15 Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp 20 25 30 Asn Trp Phe Asn 35 36 amino acids amino acid unknown peptide 232 Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys 1 5 10 15 Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn 20 25 30 Trp Phe Asn Ile 35 36 amino acids amino acid unknown peptide 233 Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn 1 5 10 15 Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn Trp 20 25 30 Phe Asn Ile Thr 35 35 amino acids amino acid unknown peptide 234 Thr Ser Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu 1 5 10 15 Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp 20 25 30 Asn Trp Phe 35 33 amino acids amino acid unknown peptide 235 Leu Ile His Ser Leu Ile Glu Glu Ser Gln Asn Gln Gln Glu Lys Asn 1 5 10 15 Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu Trp Asn Trp 20 25 30 Phe 26 amino acids amino acid unknown peptide 236 Glu Ser Gln Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu 1 5 10 15 Asp Lys Trp Ala Ser Leu Trp Asn Trp Phe 20 25 23 amino acids amino acid unknown peptide 237 Asn Gln Gln Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp 1 5 10 15 Ala Ser Leu Trp Asn Trp Phe 20 20 amino acids amino acid unknown peptide 238 Glu Lys Asn Glu Gln Glu Leu Leu Glu Leu Asp Lys Trp Ala Ser Leu 1 5 10 15 Trp Asn Trp Phe 20 28 amino acids amino acid unknown peptide 239 Leu Arg Ala Ile Glu Ala Gln Gln His Leu Leu Gln Leu Thr Val Trp 1 5 10 15 Gln Ile Lys Gln Leu Gln Ala Arg Ile Leu Ala Val 20 25 

What is claimed is:
 1. A method for the inhibition of transmission of HIV-1 to a cell, comprising contacting the virus, in the presence of the cell, with an effective concentration of a peptide for an effective period of time, so that infection of the cell by the virus is inhibited, wherein the peptide has the formula: X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (SEQ ID NO:1); in which: amino acid residues are presented by the single-letter code; X comprises an amino group, an acetyl group, a 9-fluorenylmethoxy-carbonyl group, a hydrophobic group, or a macromolecular carrier group; and Z comprises a carboxyl group, an amido group, a hydrophobic group, or a macromolecular carrier group.
 2. The method of claim 1, wherein X is an acetyl group, and Z is an amido group.
 3. The method of claim 1, wherein X is an amino group.
 4. The method of claim 1, wherein Z is a carboxyl group.
 5. The method of claim 1, wherein X is a 9-fluorenylmethoxy-carbonyl group.
 6. A method for inhibiting HIV-1 infection of a cell, comprising contacting the virus, in the presence of the cell, for an effective period of time with an effective amount of a peptide having the formula: X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (SEQ ID NO:1); in which: amino acid residues are presented by the single-letter code; X comprises an amino group, an acetyl group, a 9-fluorenylmethoxy-carbonyl group, a hydrophobic group, or a macromolecular carrier group; and Z comprises a carboxyl group, an amido group, a hydrophobic group, or a macromolecular carrier group.
 7. A method for treating or delaying the onset of AIDS in an HIV-1 infected individual, comprising administering to the individual an effective amount of a peptide having the formula: X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (SEQ ID NO:1); in which: amino acid residues are presented by the single-letter code; X comprises an amino group, an acetyl group, a 9-fluorenylmethoxy-carbonyl group, a hydrophobic group, or a macromolecular carrier group; and Z comprises a carboxyl group, an amido group, a hydrophobic group, or a macromolecular carrier group.
 8. A method for increasing the number of CD4⁻ cells in an HIV-1 infected individual, comprising administering to the individual an effective amount of a peptide having the formula:  X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (SEQ ID NO:1); in which: amino acid residues are presented by the single-letter code; X comprises an amino group, an acetyl group, a 9-fluorenylmethoxy-carbonyl group, a hydrophobic group, or a macromolecular carrier group; and Z comprises a carboxyl group, an amido group, a hydrophobic group, or a macromolecular carrier group.
 9. A method for lowering plasma levels of HIV-1 in an individual, comprising administering to the individual an effective amount of a peptide having the formula: X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (SEQ ID NO:1); in which: amino acid residues are presented by the single-letter code; X comprises an amino group, an acetyl group, a 9-fluorenylmethoxy-carbonyl group, a hydrophobic group, or a macromolecular carrier group; and Z comprises a carboxyl group, an amido group, a hydrophobic group, or a macromolecular carrier group.
 10. The method of claim 6, wherein X is a hydrophobic group.
 11. The method of claim 10, wherein the hydrophobic group X is carbobenzoxyl, dansyl, or t-butyloxycarbonyl.
 12. The method of claim 6, wherein Z is a hydrophobic group.
 13. The method of claim 12, wherein the hydrophobic group Z is t-butyloxycarbonyl.
 14. The method of claim 6, wherein X is a macromolecular carrier group.
 15. The method of claim 14, wherein the macromolecular carrier group X is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 16. The method of claim 6, wherein Z is a macromolecular carrier group.
 17. The method of claim 16, wherein the macromolecular carrier group Z is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 18. The method of claim 6, wherein at least one bond linking adjacent amino acid residues of the peptide is a non-peptide bond.
 19. The method of claim 18, wherein the non-peptide bond is an imino, ester, hydrazine, semicarbazide, or azo bond.
 20. The method of claim 6, wherein at least one amino acid residue of the peptide is in a D-isomer configuration.
 21. The method of claim 6, wherein X is an acetyl group, and Z is an amido group.
 22. The method of claim 14, wherein the macromolecular carrier group X is a peptide group.
 23. The method of claim 16, wherein the macromolecular carrier group Z is a peptide group.
 24. The method of claim 23, wherein X is a peptide macromolecular carrier group and Z is a peptide macromolecular carrier group.
 25. The method of claim 6, wherein X is an amino group.
 26. The method of claim 6, wherein Z is a carboxyl group.
 27. The method of claim 6, wherein X is a 9-fluorenylmethoxy-carbonyl group.
 28. The method of claim 6, further comprising contacting the virus with a pharmaceutically acceptable carrier.
 29. The method of claim 7, wherein X is a hydrophobic group.
 30. The method of claim 29, wherein the hydrophobic group X is carbobenzoxyl, dansyl, or t-butyloxycarbonyl.
 31. The method of claim 7, wherein Z is a hydrophobic group.
 32. The method of claim 31, wherein the hydrophobic group Z is t-butyloxycarbonyl.
 33. The method of claim 7, wherein X is a macromolecular carrier group.
 34. The method of claim 33, wherein the macromolecular carrier group X is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 35. The method of claim 7, wherein Z is a macromolecular carrier group.
 36. The method of claim 35, wherein th e macromolecular carrier group Z is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 37. The method of claim 7, wherein at least one bond linking adjacent amino acid residues of the peptide is a non-peptide bond.
 38. The method of claim 37, wherein the non-peptide bond is an imino, ester, hydrazine, semicarbazide, or azo bond.
 39. The method of claim 7, wherein at least one amino acid residue of the peptide is in a D-isomer configuration.
 40. The method of claim 7, wherein X is an acetyl group, and Z is an amido group.
 41. The method of claim 33, wherein the macromolecular carrier group X is a peptide group.
 42. The method of claim 35, wherein the macromolecular carrier group Z is a peptide group.
 43. The method of claim 42, wherein X is a peptide macromolecular carrier group and Z is a peptide macromolecular carrier group.
 44. The method of claim 7, wherein X is an amino group.
 45. The method of claim 7, wherein Z is a carboxyl group.
 46. The method of claim 7, wherein X is a 9-fluorenylmethoxy-carbonyl group.
 47. The method of claim 8, further comprising administering to the individual a pharmaceutically acceptable carrier.
 48. The method of claim 8, wherein X is a hydrophobic group.
 49. The method of claim 48, wherein the hydrophobic group X is carbobenzoxyl, dansyl, or t-butyloxycarbonyl.
 50. The method of claim 8, wherein Z is a hydrophobic group.
 51. The method of claim 50, wherein the hydrophobic group Z is t-butyloxycarbonyl.
 52. The method of claim 8, wherein X is a macromolecular carrier group.
 53. The method of claim 52, wherein the macromolecular carrier group X is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 54. The method of claim 8, wherein Z is a macromolecular carrier group.
 55. The method of claim 54, wherein the macromolecular carrier group Z is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 56. The method of claim 8, wherein at least one bond linking adjacent amino acid residues of the peptide is a non-peptide bond.
 57. The method of claim 56, wherein the non-peptide bond is an imino, ester, hydrazine, semicarbazide, or azo bond.
 58. The method of claim 8, wherein at least one amino acid residue of the peptide is in a D-isomer configuration.
 59. The method of claim 8, wherein X is an acetyl group, and Z is an amido group.
 60. The method of claim 52, wherein the macromolecular carrier group X is a peptide group.
 61. The method of claim 54, wherein the macromolecular carrier group Z is a peptide group.
 62. The method of claim 61, wherein X is a peptide macromolecular carrier group and Z is a peptide macromolecular carrier group.
 63. The method of claim 8, wherein X is an amino group.
 64. The method of claim 8, wherein Z is a carboxyl group.
 65. The method of claim 8, wherein X is a 9-fluorenylmethoxy-carbonyl group.
 66. The method of claim 9, further comprising administering to the patient a pharmaceutically acceptable carrier.
 67. The method of claim 9, wherein X is a hydrophobic group.
 68. The method of claim 67, wherein the hydrophobic group X is carbobenzoxyl, dansyl, or t-butyloxycarbonyl.
 69. The method of claim 9, wherein Z is a hydrophobic group.
 70. The method of claim 69, wherein the hydrophobic group Z is t-butyloxycarbonyl.
 71. The method of claim 9, wherein X is a macromolecular carrier group.
 72. The method of claim 71, wherein the macromolecular carrier group X is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 73. The method of claim 9, wherein Z is a macromolecular carrier group.
 74. The method of claim 73, wherein the macromolecular carrier group Z is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 75. The method of claim 9, wherein at least one bond linking adjacent amino acid residues of the peptide is a non-peptide bond.
 76. The method of claim 75, wherein the non-peptide bond is an imino, ester, hydrazine, semicarbazide, or azo bond.
 77. The method of claim 9, wherein at least one amino acid residue of the peptide is in a D-isomer configuration.
 78. The method of claim 9, wherein X is an acetyl group, and Z is an amido group.
 79. The method of claim 71, wherein the macromolecular carrier group X is a peptide group.
 80. The method of claim 73, wherein the macromolecular carrier group Z is a peptide group.
 81. The method of claim 80, wherein X is a peptide macromolecular carrier group and Z is a peptide macromolecular carrier group.
 82. The method of claim 9, wherein X is an amino group.
 83. The method of claim 9, wherein Z is a carboxyl group.
 84. The method of claim 9, wherein X is a 9-fluorenylmethoxy-carbonyl group.
 85. The method of claim 1, wherein X is a hydrophobic group.
 86. The method of claim 85, wherein the hydrophobic group X is carbobenzoxyl, dansyl, or t-butyloxycarbonyl.
 87. The method of claim 1, wherein Z is a hydrophobic group.
 88. The method of claim 87, wherein the hydrophobic group Z is t-butyloxycarbonyl.
 89. The method of claim 1, wherein X is a macromolecular carrier group.
 90. The method of claim 89, wherein the macromolecular carrier group X is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety, or a peptide group.
 91. The method of claim 1, wherein Z is a macromolecular carrier group.
 92. The method of claim 91, wherein the macromolecular carrier group Z is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety, or a peptide group.
 93. The method of claim 1, wherein at least one bond linking adjacent amino acid residues of the peptide is a non-peptide bond.
 94. The method of claim 93, wherein the non-peptide bond is an imino, ester, hydrazine, semicarbazide, or azo bond.
 95. The method of claim 1, wherein at least one amino acid residue of the peptide is in a D-isomer configuration.
 96. The method of claim 1, wherein X is a peptide macromolecular carrier group.
 97. The method of claim 1, wherein Z is a peptide macromolecular carrier group.
 98. The method of claim 1, wherein X is a peptide macromolecular carrier group X , and further wherein Z is a peptide macromolecular carrier group.
 99. The method of claim 7, further comprising administering to the individual a pharmaceutically acceptable carrier.
 100. A method for inhibiting syncytia formation between HIV-1 infected cells and cells uninfected by HIV-1, comprising contacting the infected cells for an effective period of time with an effective amount of a peptide having the formula: X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (SEQ ID NO:1); in which: amino acid residues are presented by the single-letter code; X comprises an amino group, an acetyl group, a 9-fluorenylmethoxy-carbonyl group, a hydrophobic group, or a macromolecular carrier group; and Z comprises a carboxyl group, an amido group, a hydrophobic group, or a macromolecular carrier group.
 101. The method of claim 100, wherein X is a hydrophobic group.
 102. The method of claim 101, wherein the hydrophobic group X is carbobenzoxyl, dansyl, or t-butyloxycarbonyl.
 103. The method of claim 100, wherein Z is a hydrophobic group.
 104. The method of claim 103, wherein the hydrophobic group Z is t-butyloxycarbonyl.
 105. The method of claim 100, wherein X is a macromolecular carrier group.
 106. The method of claim 106, wherein the macromolecular carrier group X is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 107. The method of claim 100, wherein Z is a macromolecular carrier group.
 108. The method of claim 108, wherein the macromolecular carrier group Z is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 109. The method of claim 100, wherein at least one bond linking adjacent amino acid residues of the peptide is a non-peptide bond.
 110. The method of claim 110, wherein the non-peptide bond is an imino, ester, hydrazine, semicarbazide, or azo bond.
 111. The method of claim 100, wherein at least one amino acid residue of the peptide is in a D-isomer configuration.
 112. The method of claim 100, wherein X is an acetyl group, and Z is an amido group.
 113. The method of claim 100, wherein X is a peptide macromolecular carrier group.
 114. The method of claim 100, wherein Z is a peptide macromolecular carrier group.
 115. The method of claim 100, wherein X is a peptide macromolecular carrier group and Z is a peptide macromolecular carrier group.
 116. The method of claim 100, wherein X is an amino group.
 117. The method of claim 100, wherein Z is a carboxyl group.
 118. The method of claim 100, wherein X is a 9-fluorenylmethoxy-carbonyl group. 